View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20142_low_16 (Length: 240)
Name: NF20142_low_16
Description: NF20142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20142_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 13371701 - 13371505
Alignment:
| Q |
1 |
ccagcccatcccactcagccttttacatagtcatctaattttgttgtttcgtctctattttgatacctaattaaaattacatatatggtatgatatctca |
100 |
Q |
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| T |
13371701 |
ccagcccatcccactcagccttttacatagtcatctaattttgttgtttcgtctctattttgatacctaattaaaattacatatatggtatgatatctca |
13371602 |
T |
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| Q |
101 |
tgatttgttcactctggaatctaacctagctttaggtctcaccctgcattagttttggcttcaccatgatttacatgtttttggtttattcgccatt |
197 |
Q |
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| T |
13371601 |
tgatttgttcactctggaatctaacctagctttaggtctcaccctgcattagttttggcttcaccatgatttacatgtttttggtttattcgccatt |
13371505 |
T |
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