View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20145_high_13 (Length: 315)
Name: NF20145_high_13
Description: NF20145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20145_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 297
Target Start/End: Original strand, 1438204 - 1438485
Alignment:
| Q |
16 |
aatatcaggctactgttttaagtaacttaccagttcaccatattcacaggaatactgttgttttacatatcttaagatttatgtcagaatcaaacagtat |
115 |
Q |
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| T |
1438204 |
aatatcaggctactgttataagtaacttaccagttcaccatattcacaggaatactgttgttttacatatcttaagatttatgtcagaatcaaacagtat |
1438303 |
T |
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| Q |
116 |
atacttgtaggaaccaaattggatataggcatcaaaagtccccaccaagttgtcatattaaaatttccacaattaatcttactcttgttttaaagcagtg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1438304 |
atacttgtaggaaccaaattggatataggcatcaaaagtccccaccaagttgtcatattaaaatttccacaattaatcttactcttgttttaaagcagtg |
1438403 |
T |
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| Q |
216 |
aactttttcctgatatcagataccacaaattataaaccaaatgaaatctgaaaaagtaagatattgcaatattcattgatgt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
1438404 |
aactttttcctgatatcagataccacaaattataaaccaaatgaaatctgaaaaagtaagatattgcaatactcattgatgt |
1438485 |
T |
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