View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20145_high_15 (Length: 274)
Name: NF20145_high_15
Description: NF20145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20145_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 35827045 - 35827262
Alignment:
| Q |
18 |
gaagaaagggttgtcctttggccatatcaaaatattactcataaaaaataattgtgcttccctnnnnnnntcattgtattcacctaacaaaaatcaagac |
117 |
Q |
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| T |
35827045 |
gaagaaagggttgtcctttggccatatcaaaatattactgataaaaaataattgtgcttccctaaaaaaatcattgtattcacctaacaaaaatcaagac |
35827144 |
T |
|
| Q |
118 |
catcacaatttcaattttcccgcatacgtagttagtaggtgaggggtgaaccgcatattaattgacttcaataattactcaaactatatcttctgcgctt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35827145 |
catcacaatttcaattttcccgcatacgtagttagtaggtgaggggtgaaccgcatattaattgacttcaataattactcaaactatatcttctgcgctt |
35827244 |
T |
|
| Q |
218 |
atctcaaaaaatagataa |
235 |
Q |
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|||||||||||||||||| |
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| T |
35827245 |
atctcaaaaaatagataa |
35827262 |
T |
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