View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20145_low_10 (Length: 336)
Name: NF20145_low_10
Description: NF20145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20145_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 321
Target Start/End: Complemental strand, 24811947 - 24811645
Alignment:
| Q |
19 |
tgtctatccgttccgatcaacatccctggatcttcataccacactgctatgaaggtacgatgagtaaacttttagaccaaagatatataaagagaataga |
118 |
Q |
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| T |
24811947 |
tgtctatctgttccgatcaacatccctggctcttcataccacactgctatgaaggtacgatgagtaaacttttagaccaaagatatataaagagaataga |
24811848 |
T |
|
| Q |
119 |
attgcaaaaagaaaataaaagagcgttaagaagttggtannnnnnnagctacataacgttgaactacatttcaaagaaattagtttattgttctcatgat |
218 |
Q |
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||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24811847 |
attgcaaaaagaaaacaaaagagcgttaagaagttggtatttttttagctacataacgttgaactacatttcaaagaaattagtttattgttctcatgat |
24811748 |
T |
|
| Q |
219 |
catatccttcaagaaccatcttatatgaagtacttgaaatggtacatttcaaataatactgctagccataattaggtgcaaatttttctcgtctggttta |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
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| T |
24811747 |
catatccttcaagaaccatcttatatgaagtacttgaaatggtacatttcaaataatactgctagccgtaattaggcgcaaatttttctcgtctggttta |
24811648 |
T |
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| Q |
319 |
ttg |
321 |
Q |
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||| |
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| T |
24811647 |
ttg |
24811645 |
T |
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