View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20146_high_37 (Length: 244)
Name: NF20146_high_37
Description: NF20146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20146_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 7152713 - 7152865
Alignment:
| Q |
75 |
aggaggcgttatttatattattaatctacataaatatatcttctatatgtcgtaaagttaaagcgatcaatacttcctatctaaattaaattaaatctta |
174 |
Q |
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| T |
7152713 |
aggaggcgttatttatattatt---ctacataaatatatcttctatatgtcgtaaagttaaagtgatcaatacttactatctaaattaaattaaatctta |
7152809 |
T |
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| Q |
175 |
attatgttttcatgaaagttaaatattt-cccatggtatagttgtatagtatatct |
229 |
Q |
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| T |
7152810 |
attatgttttcatgaaagttaaatatttaccaatagtatagttgtatagtatatct |
7152865 |
T |
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