View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20146_low_49 (Length: 235)

Name: NF20146_low_49
Description: NF20146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20146_low_49
NF20146_low_49
[»] chr3 (41 HSPs)
chr3 (15-224)||(11659532-11659742)
chr3 (20-157)||(16239620-16239757)
chr3 (22-169)||(33640076-33640223)
chr3 (20-155)||(4155353-4155487)
chr3 (18-169)||(12930035-12930185)
chr3 (20-157)||(20327768-20327904)
chr3 (20-157)||(45828048-45828184)
chr3 (69-165)||(22775545-22775641)
chr3 (46-157)||(35038348-35038457)
chr3 (20-157)||(13574839-13574976)
chr3 (20-132)||(54567921-54568032)
chr3 (59-166)||(34659147-34659252)
chr3 (59-169)||(39620160-39620270)
chr3 (72-165)||(31150924-31151017)
chr3 (46-158)||(49629660-49629772)
chr3 (29-157)||(20303304-20303431)
chr3 (20-157)||(31317257-31317396)
chr3 (59-151)||(15019440-15019532)
chr3 (20-154)||(1722998-1723131)
chr3 (72-157)||(21809059-21809144)
chr3 (73-154)||(46139344-46139424)
chr3 (20-100)||(45138946-45139026)
chr3 (110-157)||(20303218-20303265)
chr3 (95-157)||(19954371-19954433)
chr3 (112-157)||(21888525-21888570)
chr3 (92-157)||(34992706-34992771)
chr3 (92-157)||(39269174-39269239)
chr3 (20-113)||(54368545-54368637)
chr3 (20-175)||(11589814-11589968)
chr3 (104-189)||(27670280-27670365)
chr3 (114-159)||(52724138-52724183)
chr3 (49-133)||(35018533-35018616)
chr3 (95-155)||(37246774-37246834)
chr3 (80-152)||(53477003-53477075)
chr3 (52-102)||(1800086-1800136)
chr3 (20-77)||(24866226-24866283)
chr3 (21-142)||(28087149-28087269)
chr3 (46-90)||(17638289-17638333)
chr3 (121-157)||(22729622-22729658)
chr3 (20-76)||(35038193-35038249)
chr3 (121-157)||(39683422-39683458)
[»] chr5 (40 HSPs)
chr5 (20-157)||(41666911-41667048)
chr5 (20-157)||(24346655-24346792)
chr5 (20-157)||(24270024-24270160)
chr5 (51-157)||(95420-95525)
chr5 (20-157)||(25258220-25258356)
chr5 (20-157)||(25322010-25322146)
chr5 (51-159)||(15480382-15480489)
chr5 (21-157)||(18333618-18333753)
chr5 (46-157)||(43117702-43117812)
chr5 (20-157)||(9368624-9368760)
chr5 (20-157)||(24528569-24528705)
chr5 (46-157)||(17150387-17150497)
chr5 (59-169)||(17423776-17423886)
chr5 (51-157)||(26137263-26137369)
chr5 (46-155)||(32908873-32908981)
chr5 (92-157)||(11896310-11896375)
chr5 (20-157)||(24531628-24531764)
chr5 (46-157)||(6413576-6413686)
chr5 (18-157)||(6919348-6919485)
chr5 (92-157)||(8081268-8081333)
chr5 (18-175)||(21209822-21209978)
chr5 (20-154)||(8098346-8098479)
chr5 (121-157)||(17016029-17016065)
chr5 (98-157)||(33337392-33337451)
chr5 (95-153)||(13700748-13700806)
chr5 (46-127)||(2063683-2063763)
chr5 (20-76)||(12034719-12034775)
chr5 (89-157)||(17143225-17143293)
chr5 (111-155)||(18885346-18885390)
chr5 (20-91)||(13296702-13296772)
chr5 (58-157)||(17352588-17352685)
chr5 (124-157)||(2985930-2985963)
chr5 (57-169)||(6637667-6637780)
chr5 (104-157)||(15590050-15590103)
chr5 (20-77)||(25258092-25258149)
chr5 (20-77)||(25321882-25321939)
chr5 (20-100)||(1564542-1564622)
chr5 (93-141)||(30588994-30589041)
chr5 (59-119)||(35167586-35167646)
chr5 (20-76)||(41666756-41666812)
[»] chr6 (36 HSPs)
chr6 (20-157)||(4868731-4868868)
chr6 (20-157)||(12330098-12330234)
chr6 (20-157)||(13353230-13353366)
chr6 (20-157)||(33796355-33796491)
chr6 (21-157)||(9705050-9705186)
chr6 (46-157)||(6237626-6237736)
chr6 (60-172)||(2736305-2736417)
chr6 (20-154)||(15082064-15082199)
chr6 (21-157)||(6542862-6542997)
chr6 (18-154)||(11085608-11085742)
chr6 (22-157)||(32290759-32290893)
chr6 (46-157)||(3680067-3680177)
chr6 (20-154)||(33494568-33494701)
chr6 (46-139)||(8001486-8001579)
chr6 (21-155)||(24554147-24554279)
chr6 (51-159)||(6054229-6054336)
chr6 (57-157)||(6400774-6400872)
chr6 (79-169)||(21214838-21214928)
chr6 (96-157)||(30849321-30849382)
chr6 (92-157)||(31961043-31961108)
chr6 (108-152)||(28648872-28648916)
chr6 (92-155)||(7638769-7638832)
chr6 (46-157)||(33631724-33631834)
chr6 (79-157)||(17147814-17147891)
chr6 (84-154)||(34846923-34846993)
chr6 (60-157)||(3921627-3921722)
chr6 (20-136)||(8026418-8026533)
chr6 (20-76)||(9705283-9705339)
chr6 (70-157)||(3823380-3823467)
chr6 (46-157)||(30256633-30256742)
chr6 (57-154)||(5572538-5572634)
chr6 (20-76)||(4868576-4868632)
chr6 (20-76)||(6054432-6054488)
chr6 (60-156)||(12885126-12885222)
chr6 (51-175)||(19712776-19712899)
chr6 (20-88)||(30256841-30256909)
[»] chr2 (39 HSPs)
chr2 (20-157)||(2029798-2029934)
chr2 (46-157)||(5711593-5711704)
chr2 (20-157)||(16419296-16419432)
chr2 (20-157)||(14466329-14466465)
chr2 (20-157)||(40379363-40379499)
chr2 (21-175)||(10523049-10523201)
chr2 (46-157)||(15124702-15124812)
chr2 (47-157)||(21383588-21383698)
chr2 (46-157)||(93273-93383)
chr2 (63-157)||(38629913-38630007)
chr2 (46-159)||(24395918-24396030)
chr2 (51-157)||(40149155-40149260)
chr2 (72-157)||(34893506-34893590)
chr2 (46-157)||(16533367-16533477)
chr2 (20-157)||(17719429-17719565)
chr2 (51-151)||(13210586-13210686)
chr2 (20-157)||(33606208-33606344)
chr2 (20-172)||(14927131-14927283)
chr2 (92-159)||(44404078-44404146)
chr2 (46-145)||(93558-93656)
chr2 (99-157)||(17525253-17525311)
chr2 (20-90)||(28407778-28407848)
chr2 (68-153)||(19110319-19110404)
chr2 (29-157)||(32356423-32356548)
chr2 (25-134)||(33381132-33381241)
chr2 (59-152)||(36352083-36352175)
chr2 (92-157)||(37812422-37812487)
chr2 (79-155)||(18607165-18607240)
chr2 (52-112)||(31700936-31700995)
chr2 (74-169)||(11099509-11099604)
chr2 (64-156)||(42895320-42895412)
chr2 (47-152)||(44529763-44529867)
chr2 (99-151)||(37828782-37828834)
chr2 (86-157)||(21383444-21383515)
chr2 (104-175)||(36316186-36316257)
chr2 (64-157)||(13250176-13250268)
chr2 (20-76)||(16419531-16419587)
chr2 (20-76)||(40379208-40379264)
chr2 (111-175)||(42895596-42895660)
[»] chr4 (53 HSPs)
chr4 (20-157)||(35788688-35788825)
chr4 (20-157)||(22231227-22231363)
chr4 (46-157)||(40717360-40717470)
chr4 (57-157)||(28245680-28245779)
chr4 (20-157)||(50543484-50543622)
chr4 (21-154)||(6218234-6218366)
chr4 (24-157)||(35819047-35819179)
chr4 (21-157)||(52559597-52559734)
chr4 (20-157)||(35796896-35797032)
chr4 (46-175)||(40716521-40716650)
chr4 (21-157)||(33107900-33108036)
chr4 (59-154)||(4905658-4905752)
chr4 (51-157)||(4645702-4645807)
chr4 (52-165)||(6666546-6666658)
chr4 (72-165)||(7572618-7572710)
chr4 (51-169)||(18528358-18528481)
chr4 (84-152)||(25324193-25324261)
chr4 (51-154)||(4464355-4464458)
chr4 (30-144)||(30565965-30566079)
chr4 (104-157)||(5398629-5398682)
chr4 (46-159)||(11036663-11036775)
chr4 (57-153)||(36686064-36686159)
chr4 (69-141)||(49190114-49190185)
chr4 (52-159)||(21646419-21646524)
chr4 (46-157)||(22445507-22445617)
chr4 (58-148)||(22822417-22822507)
chr4 (79-157)||(27634235-27634312)
chr4 (51-144)||(7926388-7926480)
chr4 (51-131)||(13555422-13555501)
chr4 (59-157)||(25323952-25324049)
chr4 (92-157)||(5398364-5398429)
chr4 (54-107)||(13637452-13637505)
chr4 (59-148)||(30530090-30530178)
chr4 (20-148)||(24513287-24513414)
chr4 (107-155)||(31945037-31945085)
chr4 (59-127)||(50870647-50870715)
chr4 (51-126)||(43743049-43743123)
chr4 (21-175)||(14783088-14783241)
chr4 (51-175)||(2516021-2516150)
chr4 (59-152)||(30305342-30305435)
chr4 (52-157)||(42842161-42842266)
chr4 (52-136)||(9908771-9908854)
chr4 (108-155)||(6778599-6778646)
chr4 (84-162)||(26549516-26549594)
chr4 (18-91)||(21750261-21750334)
chr4 (20-89)||(35609697-35609766)
chr4 (20-77)||(36685873-36685930)
chr4 (20-77)||(40726750-40726807)
chr4 (20-76)||(22827567-22827623)
chr4 (20-76)||(22845446-22845502)
chr4 (109-157)||(35645319-35645367)
chr4 (109-157)||(35645608-35645656)
chr4 (59-119)||(40965133-40965193)
[»] chr1 (43 HSPs)
chr1 (46-157)||(33156788-33156899)
chr1 (20-157)||(35772058-35772194)
chr1 (20-157)||(39348271-39348407)
chr1 (20-157)||(2859546-2859682)
chr1 (20-157)||(30369864-30370000)
chr1 (20-189)||(26346855-26347023)
chr1 (20-157)||(4112925-4113061)
chr1 (67-155)||(4112696-4112783)
chr1 (46-154)||(31496293-31496400)
chr1 (46-157)||(26176963-26177073)
chr1 (20-157)||(25145639-25145775)
chr1 (20-157)||(27413376-27413512)
chr1 (29-157)||(51460361-51460488)
chr1 (67-157)||(9146782-9146872)
chr1 (59-152)||(38733219-38733307)
chr1 (46-157)||(4098322-4098432)
chr1 (46-157)||(16162988-16163098)
chr1 (92-157)||(25713258-25713323)
chr1 (106-157)||(26173375-26173426)
chr1 (52-152)||(5953660-5953760)
chr1 (67-157)||(369706-369797)
chr1 (18-113)||(11234243-11234338)
chr1 (46-157)||(12376592-12376702)
chr1 (51-134)||(32783223-32783305)
chr1 (20-175)||(51589835-51589989)
chr1 (95-154)||(52961450-52961509)
chr1 (29-159)||(38668163-38668292)
chr1 (88-157)||(17208650-17208719)
chr1 (46-119)||(51460007-51460079)
chr1 (113-157)||(7307842-7307886)
chr1 (21-188)||(3169796-3169962)
chr1 (21-91)||(17452812-17452882)
chr1 (20-125)||(12325510-12325615)
chr1 (46-157)||(9499300-9499410)
chr1 (18-77)||(25255338-25255397)
chr1 (67-157)||(44254139-44254229)
chr1 (20-77)||(25145483-25145540)
chr1 (52-93)||(36273095-36273136)
chr1 (21-77)||(25713423-25713479)
chr1 (57-157)||(35892122-35892221)
chr1 (20-76)||(40079181-40079237)
chr1 (20-88)||(40316037-40316105)
chr1 (20-76)||(42586438-42586494)
[»] chr7 (41 HSPs)
chr7 (20-157)||(25620165-25620301)
chr7 (46-157)||(36277145-36277255)
chr7 (51-157)||(21861354-21861459)
chr7 (20-157)||(29469634-29469770)
chr7 (46-134)||(26239857-26239945)
chr7 (46-157)||(33834246-33834356)
chr7 (21-157)||(33996233-33996365)
chr7 (46-157)||(1596648-1596758)
chr7 (59-155)||(22574669-22574764)
chr7 (20-157)||(48661474-48661610)
chr7 (46-157)||(4886384-4886494)
chr7 (51-154)||(36993230-36993332)
chr7 (59-157)||(2404327-2404424)
chr7 (20-141)||(10903114-10903234)
chr7 (20-157)||(30727273-30727410)
chr7 (20-157)||(31485578-31485714)
chr7 (46-157)||(4506987-4507097)
chr7 (46-169)||(10882146-10882268)
chr7 (20-175)||(34027422-34027576)
chr7 (67-157)||(2315180-2315269)
chr7 (59-157)||(3519958-3520055)
chr7 (20-157)||(31892180-31892317)
chr7 (59-157)||(20305358-20305459)
chr7 (23-136)||(48417454-48417567)
chr7 (51-131)||(9689045-9689124)
chr7 (51-133)||(21821866-21821947)
chr7 (113-157)||(3519879-3519923)
chr7 (51-134)||(28080724-28080806)
chr7 (57-155)||(5871876-5871974)
chr7 (67-157)||(17948310-17948400)
chr7 (46-156)||(20305583-20305692)
chr7 (103-157)||(40746186-40746240)
chr7 (35-155)||(5871732-5871852)
chr7 (104-156)||(32278991-32279043)
chr7 (46-157)||(22339522-22339632)
chr7 (59-126)||(44342878-44342945)
chr7 (29-175)||(31257168-31257313)
chr7 (90-152)||(36575095-36575157)
chr7 (29-90)||(40121909-40121970)
chr7 (20-77)||(47710472-47710529)
chr7 (20-77)||(47722128-47722185)
[»] chr8 (52 HSPs)
chr8 (23-155)||(20301293-20301424)
chr8 (23-155)||(21087925-21088056)
chr8 (18-157)||(31197642-31197779)
chr8 (20-157)||(8084156-8084292)
chr8 (20-157)||(39052848-39052984)
chr8 (46-159)||(41790713-41790825)
chr8 (20-155)||(5932105-5932239)
chr8 (20-172)||(37001255-37001409)
chr8 (20-157)||(3157478-3157614)
chr8 (20-157)||(11232348-11232484)
chr8 (21-145)||(24532352-24532475)
chr8 (22-157)||(12688103-12688237)
chr8 (72-157)||(18004248-18004332)
chr8 (46-159)||(28213020-28213133)
chr8 (92-157)||(35682935-35683000)
chr8 (59-157)||(36917358-36917455)
chr8 (46-157)||(15042803-15042915)
chr8 (30-152)||(26208172-26208294)
chr8 (20-154)||(37868505-37868638)
chr8 (57-157)||(422372-422471)
chr8 (18-169)||(4873598-4873748)
chr8 (46-157)||(8716169-8716280)
chr8 (51-154)||(12317106-12317208)
chr8 (95-157)||(7669522-7669584)
chr8 (104-157)||(3157163-3157216)
chr8 (55-152)||(8466647-8466744)
chr8 (67-157)||(10615470-10615559)
chr8 (20-154)||(16050058-16050191)
chr8 (20-161)||(4828097-4828237)
chr8 (52-157)||(20094714-20094818)
chr8 (51-112)||(38476098-38476159)
chr8 (92-157)||(39052691-39052756)
chr8 (20-143)||(19256753-19256875)
chr8 (102-157)||(29907865-29907920)
chr8 (20-119)||(38475776-38475875)
chr8 (59-157)||(10614858-10614955)
chr8 (60-157)||(42049605-42049702)
chr8 (109-157)||(7289354-7289402)
chr8 (59-159)||(10615699-10615798)
chr8 (20-112)||(11232158-11232249)
chr8 (121-169)||(27439464-27439512)
chr8 (46-94)||(29005919-29005967)
chr8 (66-154)||(31079497-31079584)
chr8 (20-76)||(35682780-35682836)
chr8 (109-157)||(39960074-39960122)
chr8 (21-74)||(7267466-7267519)
chr8 (121-157)||(5589894-5589930)
chr8 (109-157)||(5675888-5675936)
chr8 (20-88)||(10884094-10884161)
chr8 (24-76)||(25325679-25325731)
chr8 (20-76)||(39960221-39960277)
chr8 (20-76)||(42846604-42846660)
[»] scaffold0692 (1 HSPs)
scaffold0692 (46-157)||(5673-5783)
[»] scaffold0519 (1 HSPs)
scaffold0519 (20-157)||(1945-2081)
[»] scaffold0129 (1 HSPs)
scaffold0129 (21-157)||(14333-14468)
[»] scaffold0400 (1 HSPs)
scaffold0400 (20-157)||(3874-4010)
[»] scaffold0365 (1 HSPs)
scaffold0365 (20-157)||(4518-4654)
[»] scaffold0092 (1 HSPs)
scaffold0092 (29-153)||(5693-5816)
[»] scaffold0048 (1 HSPs)
scaffold0048 (46-159)||(81897-82008)
[»] scaffold0045 (1 HSPs)
scaffold0045 (59-153)||(41129-41222)
[»] scaffold0366 (2 HSPs)
scaffold0366 (92-159)||(14504-14572)
scaffold0366 (92-159)||(10838-10906)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-154)||(12676-12809)
[»] scaffold0459 (1 HSPs)
scaffold0459 (92-159)||(13197-13265)
[»] scaffold0005 (1 HSPs)
scaffold0005 (21-175)||(56489-56642)
[»] scaffold0729 (1 HSPs)
scaffold0729 (108-155)||(2610-2657)
[»] scaffold0003 (2 HSPs)
scaffold0003 (55-157)||(102296-102397)
scaffold0003 (104-157)||(87728-87781)
[»] scaffold0481 (1 HSPs)
scaffold0481 (21-90)||(3456-3525)


Alignment Details
Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 11659742 - 11659532
Alignment:
Q  15 attttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  11659742 attttctcacctcgcaagccagttttgtatagttgagttagactcaaccacgatgtctaagatcgtattagagcctcctccaagatccgttggacaacct 11659643  T
Q  115 gctattaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatcttggatgtgaggggatttgttt-aaactagaatttaatt 213  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || || |||| ||||| || | ||||| |||||||||||| |||    
T  11659642 gctatcaggttttcgctatcggaccacccaccatttatgtccatgctccaaatgtccagtcctggacgtgagcgggtgtgtttaaaactagaatttgatt 11659543  T
Q  214 ttaaatttctt 224  Q
    |||||||||||    
T  11659542 ttaaatttctt 11659532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 16239620 - 16239757
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||    ||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| | |||||||||||    
T  16239620 ctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgtttggccacctgctat 16239719  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| |||||  ||||||||||||||||||||    
T  16239720 caggtttccgttatcgagccacccaccatttatgtcca 16239757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 169
Target Start/End: Original strand, 33640076 - 33640223
Alignment:
Q  22 cacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatta 121  Q
    |||||| |||||| |||||||    ||| ||||| ||||| ||| |||||||||||  ||| |||||||||||||| ||||||||||||||||| ||| |    
T  33640076 cacctcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctcctccaaaatccgttggaccacctgttatca 33640175  T
Q  122 ggtttccgctatcggaccacccaccatttatgtccatgctccaaatgt 169  Q
      |||||| ||| |||||||||||||||||||||||||||||| ||||    
T  33640176 tatttccgttattggaccacccaccatttatgtccatgctccagatgt 33640223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 4155353 - 4155487
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    ||||||||  ||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||| ||| |||||||| | |||| |||||||||||    
T  4155353 ctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctc-tccaagattcattgggccacctgctat 4155451  T
Q  120 taggtttccgctatcggaccacccaccatttatgtc 155  Q
     |||||||||||||||| ||||||||| ||||||||    
T  4155452 caggtttccgctatcgggccacccaccgtttatgtc 4155487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 12930185 - 12930035
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgct 117  Q
    ||||||| || |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  12930185 ttctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagcctcctccatgatccgttgggccacctgct 12930086  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgt 169  Q
    || ||||||| | |||| | ||| ||||||||| ||||||||||||| ||||    
T  12930085 atcaggtttctgttatcaggcca-ccaccatttgtgtccatgctccagatgt 12930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 20327904 - 20327768
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||| ||||||||| || |||| || ||||| || || |||| |||| |||||||||||    
T  20327904 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcctc-tctaaaatccattgggccacctgctat 20327806  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||||||||||||||||    
T  20327805 caggtttccgctatcgggccacccaccatttatgtcca 20327768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 45828048 - 45828184
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||| ||||| ||||||||||| |||| |||||||| |||||||||| |||  ||||||||||     
T  45828048 ctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctc-tccaagatccattgcgccacctgctac 45828146  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||  ||||||||||||||||||||    
T  45828147 caggtttccgctatcgagccacccaccatttatgtcca 45828184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 22775641 - 22775545
Alignment:
Q  69 ttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaa 165  Q
    ||||||||| |||| |||||||||| |||||||  |||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||    
T  22775641 ttctaagatggtatcagagcctccttcaagatctattgggccacctgctattaggtttctgctatcgggccacccaccatttatatccatgcaccaa 22775545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 35038457 - 35038348
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||| ||||||||| |||| || ||||| |||||||||| |||| |||||||| || |||||||||||||||| ||||||||    
T  35038457 gttgtgttaggcccaaccacgacttctaagatggtatcagtgcctc-tccaagatccattgggccacctgcaatcaggtttccgctatcgg-ccacccac 35038360  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  35038359 catttatgtcca 35038348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 13574976 - 13574839
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||||||||||   |||| ||||| ||||||||| |||||||| || |||| | ||||||    ||||||| |||| |||||||||||    
T  13574976 ctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctcagttaagatccattgggccacctgctat 13574877  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||   |||||||||||||||||||    
T  13574876 caggtttccgctatcgtgtcacccaccatttatgtcca 13574839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 54567921 - 54568032
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||| |||  |||||||||||    
T  54567921 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct-ctccaagatccattgagccacctgctat 54568019  T
Q  120 taggtttccgcta 132  Q
     ||||||||||||    
T  54568020 caggtttccgcta 54568032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 34659252 - 34659147
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccat 158  Q
    |||| ||||||| |||||| |||| |||||||| || ||||||||||||||||| |||||||| |||||| ||||||||||||||| ||||||| |||||    
T  34659252 caactacgattt-taagatggtatcagagcctcttc-aagatccgttggaccacatgctattaagtttccactatcggaccacccatcatttatatccat 34659155  T
Q  159 gctccaaa 166  Q
    || |||||    
T  34659154 gcaccaaa 34659147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 39620160 - 39620270
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccat 158  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||||||  | ||| || |||||   ||||||||||||| || |||    
T  39620160 caaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctatccgatttacgttatcgagtcacccaccatttaggtacat 39620259  T
Q  159 gctccaaatgt 169  Q
    |||||| ||||    
T  39620260 gctccagatgt 39620270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 31150924 - 31151017
Alignment:
Q  72 taagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaa 165  Q
    |||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||  ||| |||||||||| | ||||| ||||    
T  31150924 taagatggtatcagagcctcctccaagatccgttgggccacttgctattaggtttccgttatcgggtcactcaccatttatatacatgcaccaa 31151017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 49629660 - 49629772
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggacca-ccca 144  Q
    |||| |||||||||||  || |||| ||| || ||||||||||||| || ||||||| |||||||||||||||| ||||||| ||||||||| || ||||    
T  49629660 gttgtgttagacccaattaccatttttaaaatggtattagagcctcttc-aagatccattggaccacctgctatcaggtttctgctatcggagcatccca 49629758  T
Q  145 ccatttatgtccat 158  Q
    ||||||||||||||    
T  49629759 ccatttatgtccat 49629772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 20303431 - 20303304
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttcc 128  Q
    |||||| |||||||   |||| |||||  |||||||| |||||||| || |||| |||||||| || || |||| |||| ||||||||||| ||||||||    
T  20303431 caagccggttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctc-tctaaaatccattgggccacctgctatcaggtttcc 20303333  T
Q  129 gctatcggaccacccaccatttatgtcca 157  Q
     ||||||| ||||||||||||||||||||    
T  20303332 actatcggtccacccaccatttatgtcca 20303304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 31317257 - 31317396
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgt---attagagcctcctccaagatccgttggaccacctgc 116  Q
    |||||||| |||||| |||||||    ||| ||||| | ||||||||||||||||||| ||   || |||| ||| |||||||||||||||||||||| |    
T  31317257 ctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagatggtggtatcagagtctcttccaagatccgttggaccacctac 31317356  T
Q  117 tattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||| ||||||  | |||||| ||||||||||||||||||||    
T  31317357 tatcaggttt-tgttatcgggccacccaccatttatgtcca 31317396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 15019532 - 15019440
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    ||||||||||||||||||| |||||||||| |||||| |||| | |||| |||||| |||| || ||| ||||||||||  ||||||||||||    
T  15019532 caaccacgatttctaagatggtattagagcatcctccgagattcattgggccacctactatcagattttcgctatcggataacccaccattta 15019440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 1723131 - 1722998
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| ||||||| || || |||   |||| ||||||| |||    
T  1723131 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct-cttcacgattgtttgggccacctgttat 1723033  T
Q  120 taggtttccgctatcggaccacccaccatttatgt 154  Q
     ||||||||| |||||| ||||||  |||||||||    
T  1723032 caggtttccgttatcgggccacccgtcatttatgt 1722998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 21809144 - 21809059
Alignment:
Q  72 taagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| |||| |||||||  | |||||||| ||||  |||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  21809144 taagatggtatcagagcctggttcaagatccattgggtcacctgctatcaggtttccgctatcggactacccatcatttatgtcca 21809059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 46139344 - 46139424
Alignment:
Q  73 aagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    ||||| |||||||| |||| |||||||||| ||||  |||||||||| ||||||| |||||||| |||||||||||||||||    
T  46139344 aagatggtattagatcctc-tccaagatccattgggtcacctgctatcaggtttctgctatcgggccacccaccatttatgt 46139424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 45139026 - 45138946
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagat 100  Q
    |||||||| |||||| |||||||   |||| || |||||||||||||||||||||||| |||| |||||||||| ||||||    
T  45139026 ctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggtatcagagcctccttcaagat 45138946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 20303265 - 20303218
Alignment:
Q  110 cacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20303265 cacctgctatcaggtttccgctatcggtccacccaccatttatgtcca 20303218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 19954433 - 19954371
Alignment:
Q  95 caagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| |||| ||| ||||||| |||||| ||||||| ||||||||||||||||||||||    
T  19954433 caagatccattgggccatctgctatcaggttttcgctatctgaccacccaccatttatgtcca 19954371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 21888525 - 21888570
Alignment:
Q  112 cctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  21888525 cctgctatcaggtttccgctatcggaccacccaccatttatatcca 21888570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 34992706 - 34992771
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||| ||| |||| ||||||||||| ||||||||||| ||||  |||||||||||||||||||    
T  34992706 ctccaaggtccattgggccacctgctatcaggtttccgctgtcgggtcacccaccatttatgtcca 34992771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 39269174 - 39269239
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||| ||||| |||| ||||||||||| ||||  ||| |||||||||||||||||||||||||||    
T  39269174 ctccatgatccattgggccacctgctatcaggtggccgttatcggaccacccaccatttatgtcca 39269239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 54368545 - 54368637
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacc 113  Q
    |||||||| |||||| ||||| |   |||| ||||||||||||||||||||||||||| |||| ||||||| || |||||||| |||| |||||    
T  54368545 ctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagatggtatcagagcct-cttcaagatccattgggccacc 54368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 11589814 - 11589968
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| ||||||| || || ||| | |||| ||||||| |||    
T  11589814 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-cttcacgattctttgggccacctgttat 11589912  T
Q  120 taggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
     ||||||||| ||| ||  ||||  |||||||||| || ||| || |||| |||||    
T  11589913 caggtttccgttattgggtcacctgccatttatgttcacgcttcagatgtgcaatc 11589968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 27670365 - 27670280
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatcttggatgtgagggg 189  Q
    |||||||||||| ||| ||||||||| |||||||||||||  ||||||||| || ||| || |||| ||||| ||  |||||||||    
T  27670365 ttggaccacctgttatcaggtttccgttatcggaccacccgtcatttatgttcacgcttcagatgtgcaatcctgagtgtgagggg 27670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 52724183 - 52724138
Alignment:
Q  114 tgctattaggtttccgctatcggaccacccaccatttatgtccatg 159  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||    
T  52724183 tgctatcaggttttcgctatcgggccacccaccatttatgtccatg 52724138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 35018533 - 35018616
Alignment:
Q  49 gagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctat 133  Q
    ||||||| ||||||||| | |||||||||  ||| |||||||  |||||||||||||||  ||| |||||| |||||||||||||    
T  35018533 gagttaggcccaaccacaaattctaagatgatatcagagccta-tccaagatccgttgggtcacttgctataaggtttccgctat 35018616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 37246834 - 37246774
Alignment:
Q  95 caagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    |||||| | ||||||||||||||||||||||| || ||||||  || ||||||||||||||    
T  37246834 caagattcattggaccacctgctattaggttttcgttatcgggtcatccaccatttatgtc 37246774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 53477003 - 53477075
Alignment:
Q  80 tattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||||| ||||||||||||| ||||| ||| || ||  |||||| | ||||||||||||| |||||||||    
T  53477003 tattagagcttcctccaagatccattggatcacttgataccaggttttcactatcggaccaccaaccatttat 53477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 1800086 - 1800136
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatcc 102  Q
    |||| ||||||||| ||||||||||| |||| |||||||||| ||||||||    
T  1800086 ttaggcccaaccacaatttctaagatggtatcagagcctccttcaagatcc 1800136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 24866226 - 24866283
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||||||    
T  24866226 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 28087269 - 28087149
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||    ||| || |||||||| ||||||||||||||| |||  ||||||| || || ||| | |||| ||||||| |||     
T  28087269 tcacctcacaagccggttttgtgggattgtgtcagacccaatcacgatttctaagatggtaccagagcct-cttcacgattctttgggccacctgttatc 28087171  T
Q  121 aggtttccgctatcggaccacc 142  Q
    ||||||||| |||||| |||||    
T  28087170 aggtttccgttatcgggccacc 28087149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 17638289 - 17638333
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcct 90  Q
    |||| ||||| ||||||||||||||||||||| |||| |||||||    
T  17638289 gttgtgttaggcccaaccacgatttctaagatggtataagagcct 17638333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 22729622 - 22729658
Alignment:
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  22729622 aggtttccgctatcggatcacccacaatttatgtcca 22729658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 35038249 - 35038193
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  35038249 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 39683458 - 39683422
Alignment:
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  39683458 aggtttctgctatcgggccacccaccatttatgtcca 39683422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 41667048 - 41666911
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  41667048 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgttgggccacctgctat 41666949  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| |||||| ||||||||||||||||||||    
T  41666948 caggtttccgttatcgggccacccaccatttatgtcca 41666911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 24346792 - 24346655
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||| |||||||||||    
T  24346792 ctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagatggtatcagagcctcctccaagatccattgggccacctgctat 24346693  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| |||||| ||||||||||||||||||||    
T  24346692 caggtttccgttatcgggccacccaccatttatgtcca 24346655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 24270160 - 24270024
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| |||||||| ||||||||||| |||||| |||| ||||||||||||||||||| |||| |||||||||||    
T  24270160 ctcacctcacaagccggttttgtggggttgtgttagacc-aaccacgatttttaagatggtatcagagcctcctccaagatccattgggccacctgctat 24270062  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| |||||| ||||||||||||||||||||    
T  24270061 caggtttccgttatcgggccacccaccatttatgtcca 24270024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 95525 - 95420
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||||    
T  95525 gttaggcccaaccacgatttctaagatggtatcagagcctc-tccaagatccattgggccacctgctatcaggtttccgccatcgggccacccaccattt 95427  T
Q  151 atgtcca 157  Q
    |||||||    
T  95426 atgtcca 95420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 25258356 - 25258220
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||| | |||||||   |||| |||| || ||||||||||||||||||| |||| ||||| || |||||||||| |||| |||||||||||    
T  25258356 ctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttc-tccaagatccattgggccacctgctat 25258258  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||||||||||||||||| |||||||||||    
T  25258257 caggtttccgctatcggaccacccacaatttatgtcca 25258220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 25322146 - 25322010
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||| | |||||||   |||| |||| || ||||||||||||||||||| |||| ||||| || |||||||||| |||| |||||||||||    
T  25322146 ctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttc-tccaagatccattgggccacctgctat 25322048  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||||||||||||||||| |||||||||||    
T  25322047 caggtttccgctatcggaccacccacaatttatgtcca 25322010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 15480382 - 15480489
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||||||||||||||| |||| |||||||| || ||||||| |||| ||||||||||| ||||||||||||| || |||||||||||||    
T  15480382 gttaggcccaaccacgatttctaagatggtatcagagcctcttc-aagatccattgggccacctgctatcaggtttccgctattgggccacccaccattt 15480480  T
Q  151 atgtccatg 159  Q
    |||||||||    
T  15480481 atgtccatg 15480489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 18333753 - 18333618
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||   |||| ||||| ||||||||||| ||||||||| |||| |||||||| || ||||||| | || |||||||||||     
T  18333753 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctcttc-aagatccatcgggccacctgctatc 18333655  T
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  18333654 aggttttcgctatcgggccacccaccatttatgtcca 18333618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 43117702 - 43117812
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| |||||| |||||||||||||| |||| |||||||  |||||||||  |||| ||||||||||| ||||||||||||||||||||||||     
T  43117702 gttgtgttaggcccaacaacgatttctaagatagtatcagagcctt-tccaagatctattgggccacctgctatcaggtttccgctatcggaccacccat 43117800  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  43117801 catttatgtcca 43117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 9368624 - 9368760
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||  ||||||||| | |||| |||||||| || ||||||| |||| |||||||||||    
T  9368624 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcctcttc-aagatccattgggccacctgctat 9368722  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||||| |||||||||||||| ||||||||    
T  9368723 caggtttccgctattggaccacccaccatgtatgtcca 9368760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 24528569 - 24528705
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||| |||||||||||| |||| |||||||| |||| ||||| ||||||||||||||||    
T  24528569 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcctc-tccatgatccattggaccacctgctat 24528667  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||| ||||   ||||| |||||||| ||||||||||||    
T  24528668 tagttttctattatcgaaccacccaacatttatgtcca 24528705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 17150497 - 17150387
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| | |||| ||||||| |||||| |||| |||||||| || ||||||| |||| |||||| |||| |||||||||||||||| ||||||||    
T  17150497 gttgtgttaggctcaactacgatttttaagatggtatcagagcctcttc-aagatccattgggccacctactatcaggtttccgctatcgggccacccac 17150399  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  17150398 catttatgtcca 17150387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 17423886 - 17423776
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccat 158  Q
    ||||||||| ||||||||| |||| | |||||| || |||||| ||||  |||||||||||  ||||||||||||||||| ||||||||||||  |||||    
T  17423886 caaccacgacttctaagatggtatcaaagcctcttcaaagatctgttgagccacctgctatccggtttccgctatcggacaacccaccatttacatccat 17423787  T
Q  159 gctccaaatgt 169  Q
    |||||| ||||    
T  17423786 gctccagatgt 17423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 26137369 - 26137263
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||||||||||||| | |||| ||||||| |||||||||  ||||| ||||||||||| |||||| | | ||||| ||||||| |||||    
T  26137369 gttaggcccaaccacgatttctaaggtggtatcagagcctactccaagatttgttgggccacctgctatcaggttttcaccatcgggccacccatcattt 26137270  T
Q  151 atgtcca 157  Q
    |||||||    
T  26137269 atgtcca 26137263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 32908981 - 32908873
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||||| ||||||| |||||||||||  |||||||||||| || ||||||| |||| ||| ||||||| ||||||| ||||||||  |||||||    
T  32908981 gttgtgttagactcaaccacaatttctaagatgatattagagcctcttc-aagatccattgggccatctgctatcaggtttctgctatcgggtcacccac 32908883  T
Q  146 catttatgtc 155  Q
    ||||||||||    
T  32908882 catttatgtc 32908873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 11896375 - 11896310
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||  |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  11896375 ctccaagatccattgtgccacctactatcaggtttccgctatcggaccacccaccatttatgtcca 11896310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 24531628 - 24531764
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||  ||||||   |||| ||||  ||||||||||||||||||||| |||| ||||||| ||| | ||||| |||| |||||||||||    
T  24531628 ctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcct-ctctatgatccattgggccacctgctat 24531726  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     || |||| | ||||| |||||||| ||||||||||||    
T  24531727 cagttttctgttatcgaaccacccaacatttatgtcca 24531764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 6413686 - 6413576
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| |||| ||||||| ||||||||||| || |||| | |||||| || ||||||| |||| ||||||||||| |||| ||| ||||||  ||||||||    
T  6413686 gttgtgttaaacccaacaacgatttctaatatggtatcaaagcctcttc-aagatccattgggccacctgctatcaggtatccactatcgagccacccac 6413588  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  6413587 catttatgtcca 6413576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 6919485 - 6919348
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgct 117  Q
    |||||||||| ||||| ||||||||   |||| ||||| | |||||||||||| |||||| |||| | |||||| || ||||||| |||   || |||||    
T  6919485 ttctcacctcacaagc-agttttgtgaggttgtgttaggctcaaccacgatttttaagatggtatcaaagcctcttc-aagatccattgagtcatctgct 6919388  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    || ||||||||||| ||||||||| |||||||||||||||    
T  6919387 atcaggtttccgctttcggaccactcaccatttatgtcca 6919348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 8081333 - 8081268
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||  |||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  8081333 ctccaagatcgattgggccacctgctatcaggtatcccctatcggaccacccaccatttatgtcca 8081268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 21209978 - 21209822
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgct 117  Q
    |||||||||| |||||| |||||||   |||| ||||  |||||||||||||||||| || |||||||||||| || || ||| | |||| ||||||| |    
T  21209978 ttctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagcct-cttcacgattctttgggccacctgtt 21209880  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    || ||||||||| ||||||  |||||  ||||||||| || ||| || |||| |||||    
T  21209879 atcaggtttccgttatcgggtcacccgtcatttatgttcacgcttcagatgtgcaatc 21209822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 8098346 - 8098479
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||  |||||||||||||||||| || |||| ||||||| || || ||| | |||| ||||||| |||    
T  8098346 ctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcct-cttcacgattctttgggccacctgttat 8098444  T
Q  120 taggtttccgctatcggaccacccaccatttatgt 154  Q
     ||||||||| |||||| ||||||  |||||||||    
T  8098445 caggtttccgttatcgggccacccgtcatttatgt 8098479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 17016065 - 17016029
Alignment:
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||||||||||||||||||||||||||    
T  17016065 aggtttccgctatcggaccacccaccatttatgtcca 17016029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 33337451 - 33337392
Alignment:
Q  98 gatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||| ||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||    
T  33337451 gatccattggaccatttgctatcaggtttccgccatcgggccacccaccatttatgtcca 33337392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 13700806 - 13700748
Alignment:
Q  95 caagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatg 153  Q
    |||||||| ||||  |||||||||| |||||||||||||| | ||||||||||||||||    
T  13700806 caagatccattgggtcacctgctatcaggtttccgctatcaggccacccaccatttatg 13700748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 2063763 - 2063683
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttc 127  Q
    |||| ||||| ||||||||||||||||||||| |||| ||||||| || |||||||| ||||| ||| || ||| |||||||    
T  2063763 gttgtgttaggcccaaccacgatttctaagatggtatcagagcct-cttcaagatccattggatcacatgttatcaggtttc 2063683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 12034719 - 12034775
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||||||||||||   ||| ||||| ||||||||||||||||||||    
T  12034719 ctcacctcacaagccagttttgtaggattgtgttaggcccaaccacgatttctaaga 12034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 17143225 - 17143293
Alignment:
Q  89 ctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||| |||  | || |||||| | ||||||||||| | |||||||||||||||||||||    
T  17143225 ctcctccaagatcctttgagctacttgctatcaagtttccgctattgaaccacccaccatttatgtcca 17143293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 18885346 - 18885390
Alignment:
Q  111 acctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||||| | |||||| ||||||||||||||||||||||||||||    
T  18885346 acctgctttcaggttttcgctatcggaccacccaccatttatgtc 18885390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 13296702 - 13296772
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctc 91  Q
    |||||||| ||||||||||||||   |||| ||||| ||||||||||||||||||||| ||||  |||||||    
T  13296702 ctcacctcacaagccagttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatcggagcctc 13296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 17352685 - 17352588
Alignment:
Q  58 ccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| ||||||||||| |||| ||||||| || |||||||| |||  |||| |||||| ||||||||||||| ||  |||| ||| ||||||||||    
T  17352685 ccaaccaccatttctaagatggtatcagagcct-cttcaagatcc-ttgagccacttgctatcaggtttccgctattgggtcacctaccgtttatgtcca 17352588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 2985963 - 2985930
Alignment:
Q  124 tttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||||| ||||||||||||||||||||    
T  2985963 tttccgctatcgggccacccaccatttatgtcca 2985930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 6637667 - 6637780
Alignment:
Q  57 cccaaccacgatttct-aagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    |||||||||||||| | ||||| |||| ||||||||||||| |||| ||||| |||| ||||||  | ||| |  |||||| ||||||  |||||||||     
T  6637667 cccaaccacgatttattaagatggtatcagagcctcctccacgatctgttgggccacttgctatcggattttcattatcgggccacccgtcatttatgtt 6637766  T
Q  156 catgctccaaatgt 169  Q
    || ||| |||||||    
T  6637767 cacgcttcaaatgt 6637780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 15590050 - 15590103
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| ||||||||||| | |||||||||||||| | || |||||||||||||||    
T  15590050 ttgggccacctgctatcaagtttccgctatcgggctactcaccatttatgtcca 15590103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25258149 - 25258092
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||||||    
T  25258149 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25321939 - 25321882
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||||||    
T  25321939 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 1564622 - 1564542
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagat 100  Q
    ||||| || |||| |||||||||   |||| ||||| | |||||||||||||||||||  ||| |||||||||| ||||||    
T  1564622 ctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagagcctcctacaagat 1564542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 30589041 - 30588994
Alignment:
Q  93 tccaagatccgttggaccacctgctattaggtttccgctatcggaccac 141  Q
    ||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  30589041 tccaagatctgttggaccacc-gctatcaagtttccgctatcggaccac 30588994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 35167646 - 35167586
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||||||||||||||  ||| |||| ||||||||||||| ||| ||| || ||||||    
T  35167646 caaccacgatttctaagatgatatcagagtctcctccaagatctgttagactacatgctat 35167586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 41666812 - 41666756
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  41666812 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 4868868 - 4868731
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||    
T  4868868 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgctgggccacctgctat 4868769  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| |||||| ||||||||||||||||||||    
T  4868768 caggtttccgttatcgggccacccaccatttatgtcca 4868731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 12330234 - 12330098
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| |||||||| |||||||||| |||| |||||||||||    
T  12330234 ctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc-tccaagatccattgggccacctgctat 12330136  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||| ||||| ||||||||||||||||||||    
T  12330135 caggtttccgccatcgggccacccaccatttatgtcca 12330098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 13353230 - 13353366
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| ||||||| |||    
T  13353230 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacctgttat 13353328  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||||||||||||||||    
T  13353329 caggtttccgctatcgggccacccaccatttatgtcca 13353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 33796355 - 33796491
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| ||||||| |||    
T  33796355 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacctgttat 33796453  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||||||||||||||||    
T  33796454 caggtttccgctatcgggccacccaccatttatgtcca 33796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 9705050 - 9705186
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||| | |||||||   |||| ||||| ||||||||| ||||||||||| |||| |||||||||||||||||  ||||| |||||||||||     
T  9705050 tcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctcctccaagatttgttgggccacctgctatc 9705149  T
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||  |||||| ||||||||||||||||||||    
T  9705150 aggtttccattatcgggccacccaccatttatgtcca 9705186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 6237736 - 6237626
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||||| ||| ||||| ||||||||| ||||||||| ||| || ||||||| ||||||||| |||||  |||||||||||||||||||||||||    
T  6237736 gttgtgttagactcaatcacgacttctaagatggtattagagtctcttc-aagatccattggaccacttgctaccaggtttccgctatcggaccacccac 6237638  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  6237637 catttatgtcca 6237626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 2736417 - 2736305
Alignment:
Q  60 aaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatg 159  Q
    ||||||||||||||| ||  ||| |||||||  | |||||||  |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |    
T  2736417 aaccacgatttctaaaatgatatcagagcctgattcaagatctattgggccacctgctattaggtttccgttatcggaccacccatcatttatgtccacg 2736318  T
Q  160 ctccaaatgttca 172  Q
    ||||| |||||||    
T  2736317 ctccagatgttca 2736305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 15082199 - 15082064
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgtt-ggaccacctgcta 118  Q
    |||||||| |||||| |||||||    ||| ||||| ||||| |||||||||||| || |||| ||| ||||||| |||||||||| |||||||||||||    
T  15082199 ctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctcctctaagatccgtttggaccacctgcta 15082100  T
Q  119 ttaggtttccgctatcggaccacccaccatttatgt 154  Q
    | ||||||||  |||||| |||||||||||||||||    
T  15082099 tcaggtttccattatcgggccacccaccatttatgt 15082064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 6542997 - 6542862
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    |||||||  ||||| |||||||   |||| ||||||||||||||||||||| ||||| |||| |||||||| || ||||||| ||||  ||| ||||||     
T  6542997 tcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggtatcagagcctcttc-aagatccattgggtcacttgctatc 6542899  T
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||| ||||||  |||||||||||||||||||    
T  6542898 aggtttccgttatcgggtcacccaccatttatgtcca 6542862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 11085608 - 11085742
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgct 117  Q
    ||||||| || |||||| |||||||   |||| |||||  |||| ||||||||||||||| || |||||||||| |||||||| |||||| |||||||||    
T  11085608 ttctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaagatggttttagagcctc-tccaagatacgttgggccacctgct 11085706  T
Q  118 attaggtttccgctatcggaccacccaccatttatgt 154  Q
    || |||||||||||||| || || |||||||||||||    
T  11085707 atcaggtttccgctatc-gaacaaccaccatttatgt 11085742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 32290759 - 32290893
Alignment:
Q  22 cacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatta 121  Q
    ||||||||||| || |||||||  |||| ||||| || ||| |||||||||||||| |||||||||| | |||||| |||| | || |||||| |||| |    
T  32290759 cacctcgcaagtcaattttgtagggttgtgttaggccaaacaacgatttctaagatggtattagagcat-ctccaatatccatcgggccacctactatca 32290857  T
Q  122 ggtttccgctatcggaccacccaccatttatgtcca 157  Q
    | ||| ||||||||| ||||||||||||||||||||    
T  32290858 gattttcgctatcgggccacccaccatttatgtcca 32290893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 3680067 - 3680177
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||| ||||||||||| |||| ||| |||| ||||| |||| | ||  |||||||||||||||||||||||||||  || ||||    
T  3680067 gttgtgttaggcccaaccacaatttctaagatggtatcagaccctc-tccaaaatccatcgggtcacctgctattaggtttccgctatcgggtcatccac 3680165  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  3680166 catttatgtcca 3680177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 33494568 - 33494701
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| ||| ||| || | |||||| ||||  ||||||||||    
T  33494568 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacct-cttcgagatccattgggtcacctgctat 33494666  T
Q  120 taggtttccgctatcggaccacccaccatttatgt 154  Q
     |||||||| ||||||| ||||||||| |||||||    
T  33494667 caggtttccactatcgggccacccaccgtttatgt 33494701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 8001579 - 8001486
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggacc 139  Q
    |||| ||||| ||||||||| ||||||||||| |||| |||| |||||  |||||||||||| ||||||||||| ||||||||| ||| |||||    
T  8001579 gttgtgttaggcccaaccacaatttctaagatggtatcagagtctccttaaagatccgttgggccacctgctatcaggtttccgatattggacc 8001486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 24554147 - 24554279
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||  ||||| ||||| | ||||||  |||||||| || |||| ||||  || || ||||||| |||| |||||||||||     
T  24554147 tcacctcacaagccggttttgtggagttgtgttagtctcaaccataatttctaacatggtatcagagtgtcttc-aagatccattgg-ccacctgctatc 24554244  T
Q  121 aggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||| |||||||| ||||||||||||||||||||    
T  24554245 aggttaccgctatcagaccacccaccatttatgtc 24554279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 6054229 - 6054336
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||||| |||||||||||||||||||  ||| ||| |||| || ||||| | || | ||||||||||| ||||||||||||| ||| |||| ||| |||    
T  6054229 gttagactcaaccacgatttctaagatgatatcagaacctcttc-aagattcattaggccacctgctatcaggtttccgctattggatcaccgaccgttt 6054327  T
Q  151 atgtccatg 159  Q
    |||||||||    
T  6054328 atgtccatg 6054336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 6400872 - 6400774
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    |||||||||||||| |||||| |||| | |||||| ||||| |||  | || | ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  6400872 cccaaccacgatttttaagatggtatcaaagcctc-tccaaaatctatgggtc-acctgctatcaggtttctgctatcggaccacccaccatttatgtcc 6400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 21214838 - 21214928
Alignment:
Q  79 gtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgt 169  Q
    ||||||||||||||||||||||| |||||   || |||||| ||||||||  |||||||||||  ||||||||||||| || |||| ||||    
T  21214838 gtattagagcctcctccaagatctgttgggttacatgctatcaggtttccattatcggaccacttaccatttatgtccttgttccagatgt 21214928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 30849382 - 30849321
Alignment:
Q  96 aagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||| |||||||||||||||||||||||||||||  |  |||| |||||||||||||||    
T  30849382 aagatccattggaccacctgctattaggtttccgctaatgagccactcaccatttatgtcca 30849321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 31961043 - 31961108
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| ||||||||||| ||||||| |||||||  || |||||||||||||||||    
T  31961043 ctccaagatccattgggccacctgctatcaggtttctgctatcgtgccccccaccatttatgtcca 31961108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 28648916 - 28648872
Alignment:
Q  108 accacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  28648916 accacctgctattaggtttccgctatcgggctacccaccatttat 28648872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 7638832 - 7638769
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||||||||  ||||| |||||||||| |||||||||||||| || |||||| ||||||||||    
T  7638832 ctccaagatctattggatcacctgctatcaggtttccgctatcagatcacccatcatttatgtc 7638769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 33631834 - 33631724
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    ||||||||||  ||||||| ||||| ||||||  ||| ||||| || |||||||||  ||||  |||||| ||| ||||||| ||||||||  |||||||    
T  33631834 gttgagttaggtccaaccatgatttttaagatgatatcagagcatc-tccaagatctattgggtcacctgatatcaggtttctgctatcgggacacccac 33631736  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  33631735 catttatgtcca 33631724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 17147891 - 17147814
Alignment:
Q  79 gtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| |||||||| ||||| |||| ||||  |||||||||| |||||||||||||| |  |||||||||||||||||||    
T  17147891 gtatcagagcctc-tccaacatccattgggtcacctgctatcaggtttccgctatcaggtcacccaccatttatgtcca 17147814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 34846993 - 34846923
Alignment:
Q  84 agagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||||||| ||| || || ||| |||||| |||||||||||| |||||| |||| ||||||||||||||    
T  34846993 agagcctccttcaaaattcgctgggccacctactattaggtttctgctatcagaccgcccaccatttatgt 34846923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 3921627 - 3921722
Alignment:
Q  60 aaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||| ||||||||| || |||| |||||||| || ||||||| ||||| |||||||||| | ||||||||||| || || |||| ||||||||||||    
T  3921627 aaccatgatttctaatatggtatcagagcctcttc-aagatccattggatcacctgctatcaagtttccgctat-gggccgcccatcatttatgtcca 3921722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 8026418 - 8026533
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| ||||||| || || |||  ||||| ||||||| |||    
T  8026418 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-cttcacgatttgttgggccacctgttat 8026516  T
Q  120 taggtttccgctatcgg 136  Q
     |||||| || ||||||    
T  8026517 caggttttcgttatcgg 8026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 9705283 - 9705339
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||||||||||||||||||||||||    
T  9705283 ctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 3823380 - 3823467
Alignment:
Q  70 tctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| |||| |||||||||||||||||||||||   ||| || ||| |||||||| |||||   ||||| |||||| |||||||    
T  3823380 tctaagatggtatcagagcctcctccaagatccgttgagacacttgatatcaggtttccactatcactccaccgaccattcatgtcca 3823467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 30256633 - 30256742
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||| | |||| |||||||  ||||| |||| |||| || | |||||| |||||| || |||||  |||||| |    
T  30256633 gttgtgttaggcccaaccacgatttctaaggtggtatcagagcct-ttccaaaatccattgggccgcatgctatcaggttttcgatatcgagccaccc-c 30256730  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  30256731 catttatgtcca 30256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 5572634 - 5572538
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||||||||||||||| || |||| ||||||| || || ||| | |||| || |||| ||| ||||||||| |||||| ||||||  |||||||||    
T  5572634 cccaaccacgatttctaatatggtatcagagcct-cttcacgattctttgggccgcctgttatcaggtttccgttatcgggccacccgtcatttatgt 5572538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 4868632 - 4868576
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  4868632 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 6054432 - 6054488
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| ||| ||  |||||||  |||| ||||||||||||||||||||||||||    
T  6054432 ctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 12885126 - 12885222
Alignment:
Q  60 aaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    ||||||||||||||| ||   || ||||||||||||| |||| ||||| |||| || |||||| |||| | ||||   |||||| ||||||||||||    
T  12885126 aaccacgatttctaatatgacatcagagcctcctccatgatctgttgggccacttgttattagttttctgttatctagccaccctccatttatgtcc 12885222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 19712776 - 19712899
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||| ||||||||||| |||| ||||||| || || ||| | |||| ||||||| ||| ||||||||| ||| ||  |||||  |||||    
T  19712776 gttaggcccaaccaccatttctaagatggtatcagagcct-cttcacgattctttgggccacctgttatcaggtttccgttattgggtcacccgtcattt 19712874  T
Q  151 atgtccatgctccaaatgttcaatc 175  Q
    |||| || ||| || |||| |||||    
T  19712875 atgttcacgcttcagatgtgcaatc 19712899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 30256841 - 30256909
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagc 88  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| |||||    
T  30256841 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 30256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 2029798 - 2029934
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   ||||  |||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||| |||||||||||    
T  2029798 ctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcctc-tccaagatccattgggccacctgctat 2029896  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2029897 taggtttccgctatcggaccacccaccatttatgtcca 2029934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 5711704 - 5711593
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  5711704 gttgtgttaggcccaaccaccatttctaagatagtatcagagcctcctccaagatccgttggaccacctgctatcaggtttccgttatcgggccacccac 5711605  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  5711604 catttatgtcca 5711593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 16419296 - 16419432
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   ||||  |||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||| |||||||||||    
T  16419296 ctcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctc-tccaagatccattgggccacctgctat 16419394  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||  ||||||||||||||||||||    
T  16419395 caggtttccgctatcgagccacccaccatttatgtcca 16419432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 14466465 - 14466329
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| |||| || |||    
T  14466465 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacttgttat 14466367  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||||||||||||||||    
T  14466366 caggtttccgctatcgggccacccaccatttatgtcca 14466329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 40379499 - 40379363
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||  |||||||||| || | |||||||||||    
T  40379499 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctt-tccaagatccattaggccacctgctat 40379401  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||| ||||||| ||||||||||||||| ||||    
T  40379400 caggtttcctctatcgggccacccaccatttatatcca 40379363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 10523049 - 10523201
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||||||||||| ||||||    ||| ||||| |||||||||||||||||| || |||||||  |||||||||||||| |||||  ||||||||||     
T  10523049 tcacctcgcaagccatttttgtgggattgtgttaggcccaaccacgatttctaaaatggtattag--cctcctccaagatctgttgggtcacctgctatc 10523146  T
Q  121 aggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    | ||||||| |||||  |||||||||||||||||||| ||| || |||| |||||    
T  10523147 aagtttccgttatcgagccacccaccatttatgtccacgcttcagatgtccaatc 10523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 15124812 - 15124702
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| |||||||||| |||||||||||||||| |||||| || ||||||  || ||||    
T  15124812 gttgtgttagacccaaccacgatttctaagatggtatcagagtctc-tccaagatccattggaccacctgctatcaggttttcgttatcgggtcatccac 15124714  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  15124713 catttatgtcca 15124702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 21383698 - 21383588
Alignment:
Q  47 ttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccacc 146  Q
    ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||| | ||||| ||||| ||  |||||||     
T  21383698 ttgagttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctatcaagtttctgctattgggtcacccaca 21383599  T
Q  147 atttatgtcca 157  Q
    |||||| ||||    
T  21383598 atttatatcca 21383588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 93383 - 93273
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| |||||||||||||| |||||| |||| |||||||| |||||||||| |||| ||||||||||| || |||||| |||||| ||||||||    
T  93383 gttgtgttaggcccaaccacgatttttaagatggtatcagagcctc-tccaagatccattgggccacctgctatcagctttccgttatcgggccacccac 93285  T
Q  146 catttatgtcca 157  Q
    || |||||||||    
T  93284 caattatgtcca 93273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 38629913 - 38630007
Alignment:
Q  63 cacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| |||||| |||| |||||||||||||||||||| |||  ||||| |||||||||||||||||||||| ||||| |||||||| ||||    
T  38629913 cacgatttttaagatggtatcagagcctcctccaagatccgatgggtcaccttctattaggtttccgctatcggatcacccgccatttatatcca 38630007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 24395918 - 24396030
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| || |||||||||||||||||  |||| |||||||| || ||||||| |||||||||||||| | | |||| | ||||||||||||||||    
T  24395918 gttgtgttaggccaaaccacgatttctaagagggtatcagagcctcttc-aagatccattggaccacctgctctcatgttttcactatcggaccacccac 24396016  T
Q  146 catttatgtccatg 159  Q
    ||||||||||||||    
T  24396017 catttatgtccatg 24396030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 40149260 - 40149155
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||| ||||||||||| |||| |||||||| || ||||||| ||||  |||||||||| || |||| ||||||||||||||||| ||||    
T  40149260 gttaggcccaaccacaatttctaagatggtatcagagcctcttc-aagatccattgggtcacctgctatcagatttcagctatcggaccacccactattt 40149162  T
Q  151 atgtcca 157  Q
    |||||||    
T  40149161 atgtcca 40149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 34893506 - 34893590
Alignment:
Q  72 taagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| |||| |||||||| |||||||||| |||| |||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  34893506 taagatggtatcagagcctc-tccaagatccattgggccacctactatcaggttttcgctatcggaccacccaccatttatgtcca 34893590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 16533367 - 16533477
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| |||| ||||||| |||| |||||| || |||| |||||||| || ||||||| |||| | ||||||||| |||||| ||||||||| ||||||||    
T  16533367 gttgtgttacacccaactacgacttctaaaatggtatcagagcctcttc-aagatccattgggctacctgctatcaggttttcgctatcgggccacccac 16533465  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  16533466 catttatgtcca 16533477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 17719429 - 17719565
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||| | ||||||||| ||||||||||| |||| | || ||| |||||||||| || | |||||||||||    
T  17719429 ctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggtatcaaagtctc-tccaagatccatttggccacctgctat 17719527  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||| ||||| | ||| ||||||||||||||||    
T  17719528 caggtttcccctatccggccatccaccatttatgtcca 17719565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 13210586 - 13210686
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||| | ||||||||| |||| |||| |||||||||||||| |||| |||| |||||| || ||||| ||||||| | |||||||||||    
T  13210586 gttaggcccaaccacaaattctaagatggtatcagagactcctccaagatccattgggccacatgctatcagatttcctctatcgggcaacccaccattt 13210685  T
Q  151 a 151  Q
    |    
T  13210686 a 13210686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 33606344 - 33606208
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||||||||||   |||  ||||| | |||||||||||||||||||  ||| | || ||| || ||||||  ||||  ||| ||||||    
T  33606344 ctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagatgatatcaaagtctcttc-aagatctattgggtcacttgctat 33606246  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||| | ||||||||||||||||||||    
T  33606245 caggtttccgctatcaggccacccaccatttatgtcca 33606208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 14927131 - 14927283
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    ||||||||  ||| ||| ||||| | |||| ||||| | |||||||||||||||||||   || |||||||||| || ||||||||||  ||||||||||    
T  14927131 ctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagataacatcagagcctccttcatgatccgttgggacacctgctat 14927230  T
Q  120 taggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttca 172  Q
     ||||||| | ||||    |||||| ||||| |||||| |||||| |||||||    
T  14927231 caggtttctgttatccagtcacccatcatttgtgtccacgctccagatgttca 14927283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 44404146 - 44404078
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccg-ctatcggaccacccaccatttatgtccatg 159  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||  ||||||| |||||||||||||    
T  44404146 ctccaagatccattggaccacctgctatcaggtttccgcctatcgggtcacccactatttatgtccatg 44404078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 145
Target Start/End: Complemental strand, 93656 - 93558
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| ||| |||  |||||||||| ||||  ||||| |||| ||||||||| |||||| ||||||||    
T  93656 gttgtgttaggcccaaccacgatttctaagatggtatcagaacct-ttccaagatccattgggtcacctactatcaggtttccgttatcgggccacccac 93558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 17525311 - 17525253
Alignment:
Q  99 atccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| |||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  17525311 atccattgggccacctgctatcaggtatccgctatcgggccacccaccatttatgtcca 17525253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 28407848 - 28407778
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcct 90  Q
    |||||||| |||||| |||||||  ||||| ||||| ||||||||||||||||||||| |||| |||||||    
T  28407848 ctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcct 28407778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 19110319 - 19110404
Alignment:
Q  68 tttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatg 153  Q
    |||||||||| |||| | ||||| ||||||||||||||||  |||||||||||||||||  |||||||| |||  || ||||||||    
T  19110319 tttctaagatggtatcaaagcctactccaagatccgttgggtcacctgctattaggtttttgctatcgggccattcatcatttatg 19110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 32356423 - 32356548
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttcc 128  Q
    ||||||||||||||  ||||| ||||| |||||| |||| ||||||| | |||| ||||||| || ||| || | |||| ||||||||  | ||||||||    
T  32356423 caagccagttttgtggagttgtgttaggcccaactacgaattctaagttggtatcagagcct-cttcaatattcattgggccacctgc--tcaggtttcc 32356519  T
Q  129 gctatcggaccacccaccatttatgtcca 157  Q
    |||||||| | ||| ||||||||||||||    
T  32356520 gctatcgggctacctaccatttatgtcca 32356548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 33381241 - 33381132
Alignment:
Q  25 ctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggt 124  Q
    ||||||||  ||||||||   |||| ||||| ||||||||||||||||||||| ||||||||| ||||| |||||| | || | |||| |||||  ||||    
T  33381241 ctcgcaaggaagttttgtgaggttgtgttagtcccaaccacgatttctaagatggtattagagtctccttcaagattcattaggccacatgctaacaggt 33381142  T
Q  125 ttccgctatc 134  Q
    ||| ||||||    
T  33381141 ttctgctatc 33381132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 36352175 - 36352083
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||| |||| |||||| ||||||||| ||| || ||||||| | || ||||||| ||| ||||||||| |||||| |||||||||||||||    
T  36352175 caaccacaatttttaagatggtattagagtctcttc-aagatccatcgggccacctgttatcaggtttccgttatcgggccacccaccatttat 36352083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 37812487 - 37812422
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||    
T  37812487 ctccaagatccattgggccacctgctatcaggtttctgctatcgggccacccactgtttatgtcca 37812422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 18607240 - 18607165
Alignment:
Q  79 gtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    |||| |||||||| |||||||||| |||| |||| |||||| ||||||||| |||||| | ||||||||||||||||    
T  18607240 gtatcagagcctc-tccaagatccattgggccacatgctatcaggtttccgttatcgggcaacccaccatttatgtc 18607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 31700995 - 31700936
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccac 112  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||| |||| ||||    
T  31700995 ttaggcccaaccacgatttctaagatggtattagagcct-ctccaagatccattgggccac 31700936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 11099604 - 11099509
Alignment:
Q  74 agatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgt 169  Q
    |||| |||| |||| |||||||| ||| | |||||||| ||||||| || ||||||||||||  ||||||||||||||| | || |||||| ||||    
T  11099604 agatggtatcagagtctcctccatgattcattggaccatctgctatcagatttccgctatcgagccacccaccatttatattcacgctccagatgt 11099509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 42895320 - 42895412
Alignment:
Q  64 acgatttctaagatcgtattagagcctcctccaagatccgtt-ggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    |||||||||| ||| |||| |||||||| || ||||||| || || ||||||| ||| | |||||||||||||| | |||||||||||||||||    
T  42895320 acgatttctatgatggtatcagagcctc-tctaagatccattagggccacctgatatcaagtttccgctatcgggcgacccaccatttatgtcc 42895412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 44529867 - 44529763
Alignment:
Q  47 ttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccacc 146  Q
    ||||||||| || |||||| | || ||||||  |||||||||| ||||| |||||  ||||||||  || |||||||||| ||||||||  |||||||||    
T  44529867 ttgagttaggcctaaccacaaattttaagatgatattagagccgcctccgagatcgtttggaccatttgttattaggttt-cgctatcgagccacccacc 44529769  T
Q  147 atttat 152  Q
    ||||||    
T  44529768 atttat 44529763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 37828834 - 37828782
Alignment:
Q  99 atccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    |||| ||||| ||||||||||||| ||| |||||||||| |||||||||||||    
T  37828834 atccattggatcacctgctattagattttcgctatcggatcacccaccattta 37828782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 21383515 - 21383444
Alignment:
Q  86 agcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||||| ||  | ||||||||||| ||||||||||||| || |||||||  |||||| ||||    
T  21383515 agcctcctccaagatctgtcaggccacctgctatcaggtttccgctattgggccacccattatttatatcca 21383444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 36316257 - 36316186
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    |||| ||||||| ||| ||||||||| |||||| ||||||||||||||||| || ||| || |||| |||||    
T  36316257 ttgggccacctgttatcaggtttccgttatcgggccacccaccatttatgttcacgcttcagatgtgcaatc 36316186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 13250268 - 13250176
Alignment:
Q  64 acgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||||||  ||||||||| |  |||||||||| ||||  |||||  ||| ||||||| ||||| ||  |||||||||||||||||||    
T  13250268 acgatttctaagatgatattagagcttt-tccaagatccattgggtcaccttttataaggtttctgctattggggcacccaccatttatgtcca 13250176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 16419531 - 16419587
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  16419531 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 40379264 - 40379208
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  40379264 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 42895596 - 42895660
Alignment:
Q  111 acctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    ||||||||| ||||||||||||| |   |||||||||||||| |||| |||||| |||| |||||    
T  42895596 acctgctatcaggtttccgctatagactcacccaccatttatatccacgctccagatgtccaatc 42895660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 35788688 - 35788825
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| ||||| |   |||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  35788688 ctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgttgggccacctgctat 35788787  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| |||| | ||||||||||||||||||||    
T  35788788 caggtttccgttatcaggccacccaccatttatgtcca 35788825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 22231363 - 22231227
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||| ||||| |||| |||| |||||||||||    
T  22231363 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctc-tccaaaatccattgggccacctgctat 22231265  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||| ||||||||||||||    
T  22231264 caggtttccgctatcgggccacctaccatttatgtcca 22231227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 40717470 - 40717360
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| |||||||| ||||| |||| |||| |||||||| || |||||||||||||||||||||||||    
T  40717470 gttgtgttaggcccaaccacgatttctaagatggtatcagagcctc-tccaatatccattgggccacctgccatcaggtttccgctatcggaccacccac 40717372  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  40717371 catttatgtcca 40717360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 28245779 - 28245680
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    |||||||||||||||||| || |||| |||||||| |||||||||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  28245779 cccaaccacgatttctaatatggtatcagagcctc-tccaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgtcc 28245681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 50543622 - 50543484
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgt--tggaccacctgct 117  Q
    |||||||| |||||| |||||||  ||||| ||||| |||||||||||||||||||||  ||| |||||||| |||||||||| |  | |||||||||||    
T  50543622 ctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagagcctc-tccaagatccatatttgaccacctgct 50543524  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    || ||||||||| |||||| ||||||||||||||||||||    
T  50543523 atcaggtttccgttatcgggccacccaccatttatgtcca 50543484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 6218234 - 6218366
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||| | |||||||  ||||| ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||| ||||| ||||| ||||     
T  6218234 tcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcct-ctccaagatccattggatcacctactatc 6218332  T
Q  121 aggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||||||||||| |  |||||| |||||||||    
T  6218333 aggtttccgctatcaggtcacccatcatttatgt 6218366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 35819179 - 35819047
Alignment:
Q  24 cctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattagg 123  Q
    |||| ||||||||||||||   |||| ||||| |||||||||||||| |||||| | || |||| ||| || ||||||| |||| ||||||||||| |||    
T  35819179 cctcacaagccagttttgtgaggttgtgttaggcccaaccacgatttttaagatggcatcagagtctc-tctaagatccattgggccacctgctatcagg 35819081  T
Q  124 tttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||  |||||||||||||||||||    
T  35819080 tttccgctatcgggtcacccaccatttatgtcca 35819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 52559597 - 52559734
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccg-ttggaccacctgctat 119  Q
    ||||||| |||||| |||||||   |||| ||||| |||||||| |||||||||||| |||| ||||||||||| |||||||| |||| |||||||||||    
T  52559597 tcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcctcctcaaagatccgtttgggccacctgctat 52559696  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     | ||||  | |||||| ||||||||||||||||||||    
T  52559697 caagtttatgttatcgggccacccaccatttatgtcca 52559734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 35797032 - 35796896
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||| ||||||||||   |||| ||||  |||||| || ||||||||||| |||| |||||||| || | ||||| |||||| |||||||||    
T  35797032 ctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggtatcagagcctcttcga-gatccattggactacctgctat 35796934  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||||||||||| ||||    
T  35796933 caggtttccgctatcgggccacccaccatttatctcca 35796896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 40716650 - 40716521
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| |||||||| | |||||||||| |||| |||||||| |||| |||||||||| ||||||||||| ||||||||| |||||| ||||||      
T  40716650 gttgtgttaggcccaaccatggtttctaagatggtatcagagcctcatccacgatccgttgggccacctgctatcaggtttccgttatcgggccacccgt 40716551  T
Q  146 catttatgtccatgctccaaatgttcaatc 175  Q
    ||||||||| || ||| || |||| |||||    
T  40716550 catttatgttcacgcttcagatgtgcaatc 40716521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 33107900 - 33108036
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| ||||| |||||||||   ||  |||| ||||||||||||||| ||| || |||| | ||| |||| ||| || | |||| |||||||||||     
T  33107900 tcacctcacaagcaagttttgtaggattatgttaaacccaaccacgatttttaatatggtatcaaagcttccttcaaaattcattgggccacctgctata 33107999  T
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||| |||||||||||||||||||||||||||    
T  33108000 aggtttccgttatcggaccacccaccatttatgtcca 33108036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 4905752 - 4905658
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||| ||||||||||||  ||| |||||||| |||||| ||| |||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  4905752 caaccatgatttctaagatgatatcagagcctc-tccaagctccattgggccacctgctattaggtttctgctatcgggccacccaccatttatgt 4905658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 4645702 - 4645807
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||||| |||||| ||||| |||||| |||| |||||||| || ||||||| ||||  |||||||||| |||||||||||||||| |||||||||| ||    
T  4645702 gttagactcaaccatgatttataagatagtatcagagcctc-tcaaagatccattgggtcacctgctatcaggtttccgctatcgggccacccaccaatt 4645800  T
Q  151 atgtcca 157  Q
    |||||||    
T  4645801 atgtcca 4645807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 6666658 - 6666546
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    |||| ||||||||||||||||||||| |||||||| |||| | ||||||| ||||| ||||||||||| ||| |||  |||||||  |||||||||||||    
T  6666658 ttaggcccaaccacgatttctaagatggtattagaacctc-tacaagatctgttgggccacctgctataaggattcttctatcgggtcacccaccattta 6666560  T
Q  152 tgtccatgctccaa 165  Q
    | ||||||| ||||    
T  6666559 tatccatgcaccaa 6666546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 165
Target Start/End: Complemental strand, 7572710 - 7572618
Alignment:
Q  72 taagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctccaa 165  Q
    |||||| |||| ||||||||| |||||||| |||||||||||| |||| ||||||||||||| || ||||||||||||||| ||||||| ||||    
T  7572710 taagatggtatcagagcctccaccaagatc-gttggaccaccttctatcaggtttccgctattgggccacccaccatttatatccatgcaccaa 7572618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 18528481 - 18528358
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcct------ccaagatccgttggaccacctgctattaggtttccgctatcggaccaccca 144  Q
    ||||||||||||||||||||||||||| |||| ||||||||||      |||||||| ||||| ||||||| ||| ||| |||||||||||| |||||||    
T  18528481 gttagacccaaccacgatttctaagatggtatcagagcctccttcaagaccaagatctgttgggccacctgttatcaggcttccgctatcgg-ccaccca 18528383  T
Q  145 ccatttatgtccatgctccaaatgt 169  Q
    ||||||||   |||||| |||||||    
T  18528382 ccatttatagtcatgcttcaaatgt 18528358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 25324261 - 25324193
Alignment:
Q  84 agagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||||||||||||||| |||| ||||||||||| | |||||||||||||| |||||||||||||||    
T  25324261 agagcctcctccaagatccattgggccacctgctatcaagtttccgctatcgggccacccaccatttat 25324193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 4464355 - 4464458
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| |||||||| ||||  ||| |||||| ||||||||| |||||   |||||||||| |    
T  4464355 gttagacccaaccacgaattctaagatggtatcagagcctccttcaagatccattgggtcacatgctatcaggtttccgttatcgagtcacccaccatat 4464454  T
Q  151 atgt 154  Q
    ||||    
T  4464455 atgt 4464458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 30566079 - 30565965
Alignment:
Q  30 aagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccg 129  Q
    ||||||||||||||   ||| ||||  |||||||||| ||||| |||| |||| ||||||||||| ||||||| ||||||||| |||||| | ||||| |    
T  30566079 aagccagttttgtaggtttgtgttaagcccaaccacgttttcttagatggtatgagagcctcctctaagatccattggaccacttgctatcaagtttcgg 30565980  T
Q  130 ctatcggaccaccca 144  Q
    ||||||| |||||||    
T  30565979 ctatcgggccaccca 30565965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 5398682 - 5398629
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5398682 ttgggccacctgctatcaggtttccgctatcggaccacccaccatttatgtcca 5398629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 159
Target Start/End: Complemental strand, 11036775 - 11036663
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| || |||||| |||| |||||| |||| |||||| | || ||||||| |||| |||||| ||||||||||||||||||| | ||||||||    
T  11036775 gttgtgttaggcctaaccacaatttttaagatggtatcagagccac-tctaagatccattgggccacctactattaggtttccgctatcaggccacccac 11036677  T
Q  146 catttatgtccatg 159  Q
    |||| |||||||||    
T  11036676 cattaatgtccatg 11036663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 36686159 - 36686064
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatg 153  Q
    |||||||| ||||| |||||| |||| |||||||| || ||||| |  ||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  36686159 cccaaccatgatttttaagatagtataagagcctcttc-aagattcaatgggccacctgctatcaggtttccgctatcgggccacccaccatttatg 36686064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 49190185 - 49190114
Alignment:
Q  69 ttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccac 141  Q
    ||||||||| |||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  49190185 ttctaagatggtatcagagccta-tccaagatccgttggaccacctgcttttaggtttccgctatcgaaccac 49190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 21646524 - 21646419
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    |||| |||||||||||||| |||||| ||||||||| || ||||||||| | ||||  |||||||||| | |||| | ||||||||||| ||||||||||    
T  21646524 ttaggcccaaccacgatttttaagatggtattagagtct-ctccaagattcattgggtcacctgctatcatgttttcactatcggacca-ccaccattta 21646427  T
Q  152 tgtccatg 159  Q
    ||||||||    
T  21646426 tgtccatg 21646419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 22445507 - 22445617
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||||||||||||| | ||||||||| |||| ||||||| || |||||||| |||  |||||| |||||||| || | ||||||||| ||||||    
T  22445507 gttgtgttagacccaaccacaaattctaagatggtatcagagcct-cttcaagatccattgagccacctactattaggattacactatcggactacccac 22445605  T
Q  146 catttatgtcca 157  Q
    | ||||||||||    
T  22445606 cgtttatgtcca 22445617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 22822417 - 22822507
Alignment:
Q  58 ccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccat 148  Q
    |||||||| | ||||||||| |||| |||||||||| |||||  |||||| | ||||||||| |||||||||||||||| |||| ||||||    
T  22822417 ccaaccacaaattctaagattgtatcagagcctcctacaagactcgttgggctacctgctatcaggtttccgctatcgggccactcaccat 22822507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 27634312 - 27634235
Alignment:
Q  79 gtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| |||||||| |||||||||| ||||||||| |||||| ||||||| |||||||||||||||||  ||||||||||    
T  27634312 gtatcagagcctc-tccaagatccattggaccacttgctatcaggtttctgctatcggaccacccactgtttatgtcca 27634235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 7926388 - 7926480
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccaccca 144  Q
    ||||| |||||||| |||||| ||||| |||| |||||||| |||||||||| |||| ||||||||||| |||||||| |||| || |||||||    
T  7926388 gttaggcccaaccaagatttcgaagatggtatcagagcctc-tccaagatccattgggccacctgctatcaggtttccactatagggccaccca 7926480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 13555501 - 13555422
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgct 131  Q
    ||||| ||||||||| |||||| | || |||| |||||||| |||||||||| |||||||||||||||| |||||||||||    
T  13555501 gttaggcccaaccacaatttctgatatggtatcagagcctc-tccaagatccattggaccacctgctatcaggtttccgct 13555422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 25324049 - 25323952
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| ||||||||| || |||  |||||||| ||||||||| ||||| |||||| || |||||||||| | |||||| |||||||||||||| ||||    
T  25324049 caaccatgatttctaatatggtagcagagcctc-tccaagatctgttgggccacctactcttaggtttccaccatcggatcacccaccatttatatcca 25323952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 5398429 - 5398364
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||  |||  || ||||||| |||||||| ||||||||||||||||||||||||||||    
T  5398429 ctccaagatccaatgggtcatctgctatcaggtttcccctatcggaccacccaccatttatgtcca 5398364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 13637452 - 13637505
Alignment:
Q  54 agacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttgg 107  Q
    ||||||||||||||||||||| || |||||||||||| ||| ||||||||||||    
T  13637452 agacccaaccacgatttctaaaatggtattagagccttctctaagatccgttgg 13637505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 30530178 - 30530090
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccat 148  Q
    ||||||| ||||||||||| |||| |||||||| |||||||||| || | ||||||||||| || ||||||||||||   ||||||||||    
T  30530178 caaccacaatttctaagatggtatcagagcctc-tccaagatccattaggccacctgctatcagatttccgctatcgcgtcacccaccat 30530090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 24513414 - 24513287
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||| |||  |||| ||||| ||||| |||||||||||| ||  ||| ||||||||||| ||||||  |||||||| |||||||    
T  24513414 ctcacctcacaagccggttt-gtagggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcctctaagatctattggaccatctgctat 24513316  T
Q  120 taggtttccgctatcggaccacccaccat 148  Q
     ||  |||||||||| |  ||||||||||    
T  24513315 cagacttccgctatcaggtcacccaccat 24513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 31945037 - 31945085
Alignment:
Q  107 gaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  31945037 gaccacatgctattaggtttctgctatcggaccacctaccatttatgtc 31945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 50870715 - 50870647
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttc 127  Q
    ||||||| ||||||||||| |||| ||| |||||||||| ||||||||  | |||||||||||||||||    
T  50870715 caaccacaatttctaagatggtatcagaacctcctccaatatccgttgcgctacctgctattaggtttc 50870647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 43743049 - 43743123
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggttt 126  Q
    |||||||| ||||||||||| |||||| |||| ||||||| ||| ||||||| || ||||||||||||| ||||||    
T  43743049 gttagacctaaccacgatttataagatagtatcagagcct-ctcaaagatccatttgaccacctgctatcaggttt 43743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 14783241 - 14783088
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| ||||||| || ||  || | |||| ||||||| |||     
T  14783241 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-cttcacaattctttgggccacctgttatc 14783143  T
Q  121 aggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    |||||| || |||||| ||||||  ||||||||| || ||| || |||| |||||    
T  14783142 aggttttcgttatcgggccacccgtcatttatgttcacgcttcagatgtgcaatc 14783088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 2516021 - 2516150
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctc-----ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    ||||| ||||||||||||| |||||||||||| ||||||||     ||| |||||| ||| | |||| |||||| ||||||||| ||||   |||||| |    
T  2516021 gttaggcccaaccacgattactaagatcgtatcagagcctcctcagctcaaagatcagttaggccacatgctatcaggtttccgttatcaagccacccgc 2516120  T
Q  146 catttatgtccatgctccaaatgttcaatc 175  Q
    |||||| ||||| ||| || |||| |||||    
T  2516121 catttacgtccacgcttcagatgtccaatc 2516150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 30305342 - 30305435
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    |||||||||||| ||| || |  | |||||||||| ||| |||| ||||| ||||||||||  ||||| || |||||||||||||| |||||||    
T  30305342 caaccacgatttttaatatggcgtcagagcctccttcaaaatcctttggatcacctgctatctggtttacgttatcggaccacccaacatttat 30305435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 42842266 - 42842161
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    |||||| ||||||| || ||||||||  ||| | |||||  || ||||||| ||||||||| || ||| | |||||||||||| ||||||| ||||||||    
T  42842266 ttagactcaaccacaatatctaagatgatatcatagccttttctaagatccattggaccacatgttatcatgtttccgctatccgaccaccaaccattta 42842167  T
Q  152 tgtcca 157  Q
    | ||||    
T  42842166 tatcca 42842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 9908854 - 9908771
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcgg 136  Q
    ||||||| || |||||| |||||||| |||| |||| ||| |||||||||  |||||||||||||||| || |||||| ||||||    
T  9908854 ttagacctaatcacgatatctaagatggtatcagagtctc-tccaagatctattggaccacctgctatcagatttccgttatcgg 9908771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 6778646 - 6778599
Alignment:
Q  108 accacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||| |||||| |||||||||||||||| |||||| |||||||||||    
T  6778646 accacatgctatcaggtttccgctatcgggccaccccccatttatgtc 6778599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 26549516 - 26549594
Alignment:
Q  84 agagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccatgctc 162  Q
    |||| |||||| |||||| |||||  |||||||||| ||||||| | |||| | ||||||| |||||||||||| ||||    
T  26549516 agagtctcctctaagatctgttgggtcacctgctatcaggtttctgttatcaggccacccatcatttatgtccacgctc 26549594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 21750334 - 21750261
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctc 91  Q
    |||||||||| ||| ||||||||||   |||| ||||||||||| ||||| || |||||| |||| ||||||||    
T  21750334 ttctcacctcacaaaccagttttgtgaggttgtgttagacccaatcacgaattttaagatggtatcagagcctc 21750261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 35609766 - 35609697
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcc 89  Q
    |||||||| |||||| |||||||   |||| || ||||||||||| |||||||||||| |||| ||||||    
T  35609766 ctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagatggtatcagagcc 35609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 36685930 - 36685873
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| |||| |||||||||   ||||  ||||||||||||||||||||||||||    
T  36685930 ctcacctcacaagtcagttttgtggggttgtattagacccaaccacgatttctaagat 36685873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 40726750 - 40726807
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| |||||| ||||||||   ||| ||||| |||||||||||||||||||||    
T  40726750 ctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaagat 40726807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 22827567 - 22827623
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  22827567 ctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 22845502 - 22845446
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  22845502 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 35645367 - 35645319
Alignment:
Q  109 ccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| |||||| | |||||||||||||| |||||| |||||||||||||    
T  35645367 ccacatgctatcaagtttccgctatcgggccacccgccatttatgtcca 35645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 35645656 - 35645608
Alignment:
Q  109 ccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| |||||| | |||||||||||||| |||||| |||||||||||||    
T  35645656 ccacatgctatcaagtttccgctatcgggccacccgccatttatgtcca 35645608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 40965133 - 40965193
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    ||||||| |||||||| || |||| | || |||||| ||||||||||||||||| ||||||    
T  40965133 caaccacaatttctaatatggtatcatagtctcctctaagatccgttggaccacatgctat 40965193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 33156788 - 33156899
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||| ||| ||||    
T  33156788 gttgtgttaggcccaaccacgatttctaagatggtattagagcctactccaagatccgttggttcacctgctatcaggtttccgctatcgggccatccac 33156887  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  33156888 catttatgtcca 33156899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 35772058 - 35772194
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    ||||||||||||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| ||||||| ||| ||||||| |||| ||| |||||||    
T  35772058 ctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagccttctc-aagatccattgggccatctgctat 35772156  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||||||||||||||||    
T  35772157 caggtttccgctatcgggccacccaccatttatgtcca 35772194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 39348407 - 39348271
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||| || |||||||   |||| ||||| |||||| |||||||||||||| |||| ||||||||||||||| ||| |||| |||||||||||    
T  39348407 ctcacctcacaaaccggttttgtggggttgtgttaggcccaac-acgatttctaagatggtatcagagcctcctccaaggtccattgggccacctgctat 39348309  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||| ||||||||||||||||||||||||||||    
T  39348308 caggtttccactatcggaccacccaccatttatgtcca 39348271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 2859682 - 2859546
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||  ||||||||||| ||||||||||||| || ||||||| |||| |||||| ||||    
T  2859682 ctcacctcacaagccggttttgtgaggttgtgttagccccaaccatcatttctaagatggtattagagcctcttc-aagatccattgggccaccttctat 2859584  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  2859583 taggtttctgctatcgggccacccaccatttatgtcca 2859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 30369864 - 30370000
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||  ||||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||| |||||||||| ||||  ||||||||||    
T  30369864 ctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagagcctc-tccaagatccattgggtcacctgctat 30369962  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||| ||||||| ||||||||||||||||||||    
T  30369963 caggtttccactatcgggccacccaccatttatgtcca 30370000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 26347023 - 26346855
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| | || ||||||||||||||||  ||| ||||||||||| || |||||||||||||||||||||    
T  26347023 ctcacctcacaagcccgttttgtggggttgtgttagcctca-ccacgatttctaagatgatatcagagcctcctcaaa-atccgttggaccacctgctat 26346926  T
Q  120 taggtttccg-ctatcggaccacccaccatttatgtccatgctccaaatgttcaatcttggatgtgagggg 189  Q
    |||||||  |  || ||||||| |||||||||| |||||||||||| ||||||| ||||||| ||||||||    
T  26346925 taggtttttgtttaacggaccagccaccatttaggtccatgctccagatgttcagtcttggacgtgagggg 26346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 4113061 - 4112925
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| ||||  ||||||| |||||||||| |||  |||||  ||||    
T  4113061 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcggagcctc-tccaagatccattgagccaccatctat 4112963  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||||| |||||||||||||||||||||||    
T  4112962 caggtttccgctattggaccacccaccatttatgtcca 4112925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 4112783 - 4112696
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||||||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  4112783 atttctaagatggtatcagagcctc-tccaagatccattggaccacctgctatcaggtttccgctatcgaaccacccaccatttatgtc 4112696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 31496400 - 31496293
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||| ||| |  ||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  31496400 gttgtgttagactcaatcacgatttctaagatagtattagagtctcttt-aagatccattggaccacctgctatcaggttcccgctatcggaccacccac 31496302  T
Q  146 catttatgt 154  Q
    |||||||||    
T  31496301 catttatgt 31496293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 26176963 - 26177073
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||| |||||||||||||  ||| |||||||| |||||||||| |||| ||||||||||| || ||||||||||||||||||||||    
T  26176963 gttgtgttaggcccaaccgcgatttctaagatgatatcagagcctc-tccaagatccattgggccacctgctatcagatttccgctatcggaccacccac 26177061  T
Q  146 catttatgtcca 157  Q
    ||||||| ||||    
T  26177062 catttatatcca 26177073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 25145775 - 25145639
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| | |||||   |||| ||||| |||||||| ||||||||||||  ||| |||||||| |||||||||  |||  |||||||||||    
T  25145775 ctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatcagagcctc-tccaagatctattgacccacctgctat 25145677  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||| ||||||||||||||||||| |||||||    
T  25145676 caggtttccgttatcggaccacccaccattaatgtcca 25145639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 27413376 - 27413512
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||  ||||||   |||| |||||  ||||||||||||||||||||  ||| |||||||| |||||||||  || ||||||||| |||    
T  27413376 ctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctc-tccaagatctattagaccacctgttat 27413474  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     || ||||||||||||| ||||||||||||||||||||    
T  27413475 cagatttccgctatcgggccacccaccatttatgtcca 27413512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 51460488 - 51460361
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttcc 128  Q
    ||||||||||||||   |||| ||||| ||||||||  |||||||| ||  ||| |||||||| |||||||||| |||| ||||||||||| ||||||||    
T  51460488 caagccagttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctc-tccaagatccattgggccacctgctatcaggtttcc 51460390  T
Q  129 gctatcggaccacccaccatttatgtcca 157  Q
    |||||||| | ||||||||||| ||||||    
T  51460389 gctatcgggcgacccaccatttgtgtcca 51460361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 9146872 - 9146782
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| ||||||| ||||||||||| |||||||| |||| || ||||| ||||||||||  |||||||||||||||||||    
T  9146872 atttctaagatggtatcagagccttctccaagatccattggaccaactgcaataaggttaccgctatcgggtcacccaccatttatgtcca 9146782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 38733219 - 38733307
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||| |||||||||||||||| |||||||||||||    |||||||||||||||    
T  38733219 caaccacgatttctaagatggtatcagagtctc-tccaagatccattggaccacctgctatcaggtttccgctat----ccacccaccatttat 38733307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 4098432 - 4098322
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||| | |||| |||| || || |||||||| |||| |||||||| || ||||||| |||||||| ||||||||    
T  4098432 gttgtgttaggcccaaccacgatttctaagttggtatcagagact-cttcaagatccattgggccacctgcaatcaggtttctgctatcgggccacccac 4098334  T
Q  146 catttatgtcca 157  Q
    | ||||||||||    
T  4098333 cctttatgtcca 4098322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 16162988 - 16163098
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||||| ||||||| |||| ||||||  ||| | |||||| ||||||||||  ||| ||||||||||| |||||||||||||||| ||||| ||    
T  16162988 gttgtgttagactcaaccacaatttttaagatgatatcaaagcctc-tccaagatccaatgggccacctgctatcaggtttccgctatcgggccacctac 16163086  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  16163087 catttatgtcca 16163098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 25713258 - 25713323
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| ||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  25713258 ctccaagatccattgggccacctgctatcaagtttccgctatcgggccacccaccatttatgtcca 25713323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 26173426 - 26173375
Alignment:
Q  106 ggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  26173426 ggaccacctgctatcaggtttccgctatcggaccccccaccatttatgtcca 26173375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 5953760 - 5953660
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    |||| ||||||| | |||| |||||| |||| |||||||| ||||||||||||| | ||||||||| | ||||||||  |||||| ||||||| ||||||    
T  5953760 ttaggcccaacctcaatttttaagatggtatcagagcctcatccaagatccgttaggccacctgctttcaggtttccattatcgggccacccaacattta 5953661  T
Q  152 t 152  Q
    |    
T  5953660 t 5953660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 369706 - 369797
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatc-ggaccacccaccatttatgtcca 157  Q
    ||||||| ||| |||| ||||||| ||| ||||||| ||||| || ||||||| |||||||||||||| ||  |||||||||||||||||||    
T  369706 atttctaggatggtatcagagcctactctaagatccattggatcagctgctatcaggtttccgctatcggggtcacccaccatttatgtcca 369797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 11234243 - 11234338
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacc 113  Q
    ||||||||||  ||||| |||||||   ||||  |||| ||||||||| | || |||||| ||||||||||||||||||||||||||||| |||||    
T  11234243 ttctcacctcataagccggttttgtggggttgtattaggcccaaccacaaattataagatggtattagagcctcctccaagatccgttgggccacc 11234338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 12376702 - 12376592
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    ||||||||||  ||||| |||||||||||| | |||||||||| |||   ||||||| |||| ||||||||||| ||| ||| |||||| | ||||| ||    
T  12376702 gttgagttaggtccaacgacgatttctaagttggtattagagcatccgttaagatccattgggccacctgctatcagg-ttctgctatcaggccacctac 12376604  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  12376603 catttatgtcca 12376592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 32783305 - 32783223
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatc 134  Q
    |||||| |||||||||||||||||||| |||| |||| || || |||||||| ||| |||||||||||| ||||||| ||||||    
T  32783305 gttagatccaaccacgatttctaagatggtatcagagtct-cttcaagatccattgtaccacctgctatcaggtttctgctatc 32783223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 51589835 - 51589989
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||  ||||||   |||| ||||| |||||||||||||||||| || |||| ||||||| || || ||| | |||| ||||||  |||    
T  51589835 ctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-cttcacgattctttgggccacctattat 51589933  T
Q  120 taggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    |||||||||| |||||| ||||||  ||||||||| || ||| || |||| |||||    
T  51589934 taggtttccgttatcgggccacccgtcatttatgttcacgcttcagatgtgcaatc 51589989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 52961450 - 52961509
Alignment:
Q  95 caagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||||| |||| ||||||||||| |||||||||||||||| |||||||||| ||||||    
T  52961450 caagatccattgggccacctgctatcaggtttccgctatcgggccacccaccagttatgt 52961509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 38668163 - 38668292
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttcc 128  Q
    ||||||| ||||||   |||| ||||| ||||| ||| ||||||||||| |||| |||||||| |||| ||||| ||||  |||||| ||| |||||||     
T  38668163 caagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctc-tccatgatccattgggtcacctgttatcaggtttct 38668261  T
Q  129 gctatcggaccacccaccatttatgtccatg 159  Q
    ||||||||  |||| | ||||||||||||||    
T  38668262 gctatcgggtcacctatcatttatgtccatg 38668292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 17208650 - 17208719
Alignment:
Q  88 cctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| |||||||| |||  ||| ||||||| |||||||||||||||| ||||||||||||||| ||||    
T  17208650 cctccttcaagatcccttgagccatctgctatcaggtttccgctatcgggccacccaccatttatatcca 17208719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 51460079 - 51460007
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||| ||||| ||||||||| ||||||||||| ||||||| |||| ||||||||||| |||| |||||||||||    
T  51460079 gttgtgttaggcccaaccacaatttctaagatggtattagcgcct-ctccaagatccattgggccacctgctat 51460007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 7307842 - 7307886
Alignment:
Q  113 ctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  7307842 ctgctatcaggtttccgctattggaccacccaccatttatgtcca 7307886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 3169796 - 3169962
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| ||||  |||| || ||| | || | ||||||| |||     
T  3169796 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag-ttccttcacgattctttaggccacctgttatc 3169894  T
Q  121 aggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatcttggatgtgaggg 188  Q
    ||||||||| |||||| ||||||  ||||||||| || ||| || |||| ||||| ||  ||||||||    
T  3169895 aggtttccgttatcgggccacccgtcatttatgttcacgcttcagatgtgcaatcctgagtgtgaggg 3169962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 17452882 - 17452812
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctc 91  Q
    ||||||| |||||| |||||||   |||| ||||| || |||||||||||||||||| |||||||||||||    
T  17452882 tcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagagcctc 17452812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 12325615 - 12325510
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||||||||||   ||||||||||  ||||| ||  ||||||| || |||||||||| |||   ||||||| |||| |||||||||||    
T  12325615 ctcacctcacaagccagttttgtggggttgagttaggtccaacgacagtttctaacatggtattagagcatccgttaagatccattgggccacctgctat 12325516  T
Q  120 taggtt 125  Q
     |||||    
T  12325515 caggtt 12325510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 9499300 - 9499410
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||| ||| |||||||||||||||| ||  ||| |||| ||| || ||| ||| ||||||||| || || |||||||| | ||| |||||||||||    
T  9499300 gttgtgttcgactcaaccacgatttctaaaatgatatcagagtctcttcaaag-tccattggaccacttgttagtaggtttctgttattggaccacccac 9499398  T
Q  146 catttatgtcca 157  Q
    ||||| ||||||    
T  9499399 catttttgtcca 9499410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 25255338 - 25255397
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||||| |||||| |||||||   |||| ||||| |||||||||||||||||||||    
T  25255338 ttctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25255397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 44254139 - 44254229
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| ||  ||| |||| ||||| ||||||||||| |||||| |||||| || |||  ||||||  |||| ||||||||||||||||    
T  44254139 atttctaacatgatatcagagtctccttcaagatccgttagaccacatgctatcagatttttgctatcaaaccatccaccatttatgtcca 44254229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 25145540 - 25145483
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| |||| | |||||||   |||| |||||||||||||||||||||||||||    
T  25145540 ctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagat 25145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 36273095 - 36273136
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcct 93  Q
    ||||||| |||||||||||||||||| ||||||||| |||||    
T  36273095 ttagacctaaccacgatttctaagatggtattagagtctcct 36273136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 25713423 - 25713479
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    ||||||| ||||||||||||||  ||||| ||||| || |||||| |||||||||||    
T  25713423 tcacctcacaagccagttttgtggagttgtgttaggcctaaccaccatttctaagat 25713479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 35892122 - 35892221
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    |||| |||||||||||||||  |||| |||| ||| || ||||| | |||| |||| |||||| |  |||| ||||||||  ||||||||||||||||||    
T  35892122 cccatccacgatttctaagaaggtatcagagtctcttc-aagattcattgggccacttgctatcatatttctgctatcggggcacccaccatttatgtcc 35892220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 40079181 - 40079237
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  40079181 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 40316105 - 40316037
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagc 88  Q
    ||||||||  ||||| |||||||   |||| |||||| ||||||||||||||||| || ||||||||||    
T  40316105 ctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaacatggtattagagc 40316037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 42586494 - 42586438
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| ||||||| ||||||   |||| ||||| ||||||||||||||||||||    
T  42586494 ctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaaga 42586438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 25620165 - 25620301
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||| |||||||||||    
T  25620165 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctc-tccaagatccattgggccacctgctat 25620263  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||||| || ||||||||||||||||||||    
T  25620264 caggtttccgctattgggccacccaccatttatgtcca 25620301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 36277255 - 36277145
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| |||||||||||||||||||||  ||| |||||||| |||||||||| |||| |||||| |||| |||||||||||||||||||||||||    
T  36277255 gttgtgttagtcccaaccacgatttctaagatgttatcagagcctc-tccaagatccattgggccacctactatcaggtttccgctatcggaccacccac 36277157  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  36277156 catttatgtcca 36277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 21861354 - 21861459
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| ||||||| ||| |||||||||||||||| |||||||||||||    
T  21861354 gttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacctgttatcaggtttccgctatcgggccacccaccattt 21861452  T
Q  151 atgtcca 157  Q
    |||||||    
T  21861453 atgtcca 21861459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 29469634 - 29469770
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| |||||||| |||||||||| |||| ||||||| |||    
T  29469634 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctc-tccaagatccattgggccacctgttat 29469732  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||| |||||||||||| ||||||||||||||||||||    
T  29469733 caggcttccgctatcgggccacccaccatttatgtcca 29469770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 26239945 - 26239857
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatc 134  Q
    |||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  26239945 gttgtgttagacccaaccacaatttctaagatggtatcagagcctcctccaagatccgttgggccacctgctatcaggtttccgttatc 26239857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 33834246 - 33834356
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| ||||||||||| |||||| | ||||||| ||||||||    
T  33834246 gttgtgttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacctgctatcaggttttccctatcgggccacccac 33834344  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  33834345 catttatgtcca 33834356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 33996365 - 33996233
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||| | |||||||  ||||| ||||| ||||||||||||||||||||| |||| |||||||| ||||   ||| |||| |||||||||||     
T  33996365 tcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctc-tcca---tccattgggccacctgctatc 33996270  T
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  33996269 aggtttccgcaatcgggccacccaccatttatgtcca 33996233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 1596648 - 1596758
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| || |||||| ||||||||||| |||| |||||||| |||||||||| |||| |||| || ||| |||||||||||||||| ||||||||    
T  1596648 gttgtgttaggcctaaccacaatttctaagatggtatcagagcctc-tccaagatccattgggccacatgttatcaggtttccgctatcgggccacccac 1596746  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  1596747 catttatgtcca 1596758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 22574669 - 22574764
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||||| ||||||| ||| |||| |||| ||| |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22574669 caaccacaatttctatgatggtataagagtctc-tccaagatccattgggccacctgctatcaggtttcagctatcggaccacccaccatttatgtc 22574764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 48661610 - 48661474
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||    ||| |||||||||||||||||||||||| ||  ||| |||||||| |  |||| || |||  |||||||||||    
T  48661610 ctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaatatgatatcagagcctcttt-aagaaccattgagccacctgctat 48661512  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||| |||| ||||||||||||||||||||    
T  48661511 caggtttccgctttcgggccacccaccatttatgtcca 48661474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 4886384 - 4886494
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| || | ||| |||||||||| |||| ||||||||||| | |||||  ||||||  ||||||||    
T  4886384 gttgtgttaggcccaaccacgatttctaagatggtatcagggtctc-tccaagatccattgggccacctgctatcaagtttctactatcgagccacccac 4886482  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  4886483 catttatgtcca 4886494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 36993332 - 36993230
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    |||||| ||||||| |||||||||||| |||| |||||||| || ||||||| |||| |||| |||||| || |||||||||| ||||||||||| ||||    
T  36993332 gttagatccaaccatgatttctaagatggtatcagagcctcttc-aagatccattgggccacgtgctatcagatttccgctattggaccacccactattt 36993234  T
Q  151 atgt 154  Q
    ||||    
T  36993233 atgt 36993230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 2404424 - 2404327
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||||||||||| |||| |||||||| || || |||| ||||  |||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  2404424 caaccacgatttctaagatggtatcagagcctcttcgaa-atccattgggtcacctgctatcaggtttccgctattggaccacctaccgtttatgtcca 2404327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 10903114 - 10903234
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||  ||||| ||||| ||||||||||||| |||| ||  ||| ||||| || |||||||||| |||| ||||||| |||    
T  10903114 ctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaaaatgatatcagagcttc-tccaagatccattgggccacctgttat 10903212  T
Q  120 taggtttccgctatcggaccac 141  Q
     | |||||||||||||||||||    
T  10903213 catgtttccgctatcggaccac 10903234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 30727410 - 30727273
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||||||||| ||| ||||  |||| |||||| |||| |||| ||  ||||||||  ||||| |||||| ||||    
T  30727410 ctcacctcacaagccggttttgtgaggttgagttagtcccgaccagaatttttaagatggtatcagagtctaatccaagatttgttgggccaccttctat 30727311  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     ||||||||||||| || ||||||||||||||| ||||    
T  30727310 caggtttccgctattgggccacccaccatttatatcca 30727273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 31485714 - 31485578
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||  ||||| ||||| || |||||| ||||||||||| |||| |||||| | | |||||||| |||| |||||| ||||    
T  31485714 ctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaagatggtataagagccgc-tacaagatccattgggccacctactat 31485616  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||| | ||||||| ||||||||||||||| ||||    
T  31485615 caggttttcactatcgggccacccaccatttatatcca 31485578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 4506987 - 4507097
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| |||||||||||| |||||||||||||| |||| |||||||  | |||||||| ||||  |||||||||| || |||||| |||| ||||||| ||    
T  4506987 gttgtgttagacccaactacgatttctaagattgtatcagagcct-tttcaagatccattgggtcacctgctatcagatttccgttatcagaccaccaac 4507085  T
Q  146 catttatgtcca 157  Q
    || |||||||||    
T  4507086 cagttatgtcca 4507097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 10882268 - 10882146
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| ||||||| || || ||| | |||| ||||||| ||| ||||||||| |||||||| ||||      
T  10882268 gttgtgttaggcccaaccacgatttctaagatggtatcagagcct-cttcacgattctttgggccacctgttatcaggtttccgttatcggacaacccgt 10882170  T
Q  146 catttatgtccatgctccaaatgt 169  Q
    ||||||||| || ||| |||||||    
T  10882169 catttatgttcacgcttcaaatgt 10882146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 34027422 - 34027576
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||||||||||| || || ||| | |||| ||||||| |||    
T  34027422 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagcct-cttcacgattctttgggccacctgttat 34027520  T
Q  120 taggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
     ||||||||  |||||| ||||||  ||||||||| || ||| || |||| |||||    
T  34027521 caggtttccattatcgggccacccgtcatttatgttcacgcttcagatgtgcaatc 34027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 2315269 - 2315180
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| || |||||| ||| || |||||| ||| |||| ||||||||||| || ||||||| ||||||||||||||||||||||||||    
T  2315269 atttctaaaatggtattatagcttc-tccaaggtccattgggccacctgctatcagatttccgcaatcggaccacccaccatttatgtcca 2315180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 3520055 - 3519958
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||| || | |||| |||||||| |||| ||||| |||| |||||||||||  ||||| |||||||||  |||||||||||||||||||    
T  3520055 caaccacgatttcttagttggtatcagagcctc-tccatgatccattgggccacctgctatctggttttcgctatcgggacacccaccatttatgtcca 3519958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 31892180 - 31892317
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaa-ccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgcta 118  Q
    |||||||| |||||| |||||||  ||||  ||||| ||||| || |||| |||||||| | || |||||||| ||||||| |  |||| ||||||||||    
T  31892180 ctcacctcacaagccggttttgtggagttatgttaggcccaaaccccgatctctaagatggaatcagagcctc-tccaagacctattgggccacctgcta 31892278  T
Q  119 ttaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    | ||||||||| |||| | ||||||||||||||||||||    
T  31892279 tcaggtttccgttatcaggccacccaccatttatgtcca 31892317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 20305358 - 20305459
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggac----cacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||||||||| |||||| |||| |||||||| || ||||||| |||||     || ||||||| |||||||||||||||| |||||||||||||||||    
T  20305358 caaccacgatttttaagatggtatcagagcctcttc-aagatccattggatgggtcatctgctatcaggtttccgctatcgggccacccaccatttatgt 20305456  T
Q  155 cca 157  Q
    |||    
T  20305457 cca 20305459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 48417567 - 48417454
Alignment:
Q  23 acctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattag 122  Q
    ||||| ||| ||||||||||   |||| ||||| ||||||||| |||||| |||| |||||||||||| ||||  ||||| |||| |||||||||||       
T  48417567 acctcacaaaccagttttgtggggttgtgttaggcccaaccacaatttcttagatggtattagagccttctccttgatccattgggccacctgctatctt 48417468  T
Q  123 gtttccgctatcgg 136  Q
    ||||||||||||||    
T  48417467 gtttccgctatcgg 48417454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 9689124 - 9689045
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgct 131  Q
    ||||| ||||||||| |||||| | || |||| |||||||| |||||||||| |||||||||||||||| |||||||||||    
T  9689124 gttaggcccaaccacaatttctgatatggtatcagagcctc-tccaagatccattggaccacctgctatcaggtttccgct 9689045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 21821866 - 21821947
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctat 133  Q
    ||||| ||||||||||||||||||||| |||| ||||||| || |||||| |||||| ||| ||||||  |||||||||||||    
T  21821866 gttaggcccaaccacgatttctaagatggtatcagagcct-cttcaagatacgttgggccaactgctagcaggtttccgctat 21821947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 3519923 - 3519879
Alignment:
Q  113 ctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  3519923 ctgctatcaggtttccgctatcgggccacccaccatttatgtcca 3519879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 28080724 - 28080806
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatc 134  Q
    |||||| ||||||||||||||||||||  ||| ||||||| || |||||||  |||| ||||||||||| | ||||||||||||    
T  28080724 gttagatccaaccacgatttctaagatgatatcagagcct-cttcaagatctattgggccacctgctatcaagtttccgctatc 28080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 5871974 - 5871876
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    |||||||||||||||||||||  ||| ||||||| |   ||||||| |||   |||||||||| |  ||||||||||||||| ||| ||||||||||||    
T  5871974 cccaaccacgatttctaagatgatatcagagcctgcgttaagatccattgagtcacctgctatcatatttccgctatcggacgacctaccatttatgtc 5871876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 17948310 - 17948400
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| ||||||| |||||||||  |||||  ||| |  ||| || ||||||||||| ||||||||||||||| ||||||    
T  17948310 atttctaagatggtatcagagcctactccaagatttgttgggtcacttattatcagatttccgctatcagaccacccaccatttgtgtcca 17948400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 20305692 - 20305583
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| || ||||| ||||||||| ||  ||| | ||||||||||| |||||||||| ||||||| || |||||||||| | |||  | ||||||    
T  20305692 gttgtgttaggcctaaccatgatttctaatatgctatcatagcctcctccatgatccgttgg-ccacctgatactaggtttccgttgtcgagctacccac 20305594  T
Q  146 catttatgtcc 156  Q
    |||||||||||    
T  20305593 catttatgtcc 20305583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 40746240 - 40746186
Alignment:
Q  103 gttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||| ||||||||||| |||||| || ||||| |||||||||||||||||||||    
T  40746240 gttgggccacctgctatcaggttttcgttatcgaaccacccaccatttatgtcca 40746186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 5871852 - 5871732
Alignment:
Q  35 agttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatc 134  Q
    |||||||||  |||| ||||| |||||||||||||||||||||  ||| |||||||||   ||||||| |||   ||||| |||| |  |||  ||||||    
T  5871852 agttttgtagggttgtgttagtcccaaccacgatttctaagatgatatcagagcctccgttaagatccattgagtcacctactatcatatttttgctatc 5871753  T
Q  135 ggaccacccaccatttatgtc 155  Q
    |||| ||| ||||||||||||    
T  5871752 ggacgacctaccatttatgtc 5871732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 32279043 - 32278991
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    |||| ||||||||||| |||||| ||||||||| ||| |||||||||||||||    
T  32279043 ttgggccacctgctatcaggttttcgctatcgggccatccaccatttatgtcc 32278991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 22339632 - 22339522
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| |||||| || |||||||| || |||| |||||||||   ||||||| |||||||||||||||  |||||| | ||||| ||||  ||||    
T  22339632 gttgtgttaggcccaacgacaatttctaatatggtatcagagcctccgttaagatccattggaccacctgctaccaggttttctctatc-gacccaccac 22339534  T
Q  146 catttatgtcca 157  Q
    |||| |||||||    
T  22339533 cattaatgtcca 22339522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 44342945 - 44342878
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggttt 126  Q
    ||||||| |||| |||||| |||| | || ||||||||||||| ||||| ||||||||||||| ||||    
T  44342945 caaccacaatttttaagatggtatcaaagtctcctccaagatctgttgggccacctgctattaagttt 44342878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 31257313 - 31257168
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttcc 128  Q
    |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| |||| || || || ||| | |||| ||| ||| ||| ||||||||    
T  31257313 caagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag-cttcttcacgattctttgggccatctgttatcaggtttcc 31257215  T
Q  129 gctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    | |||||| ||||||  ||||||||| || ||| || |||| |||||    
T  31257214 gttatcgggccacccgtcatttatgttcacgcttcagatgtgcaatc 31257168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 36575157 - 36575095
Alignment:
Q  90 tcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||||||||| ||||||||| |||||| | |||| | ||||| ||||||| |||||||||    
T  36575157 tcctccaagatccattggaccacatgctatcatgttttcactatccgaccaccgaccatttat 36575095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 40121970 - 40121909
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcct 90  Q
    |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||    
T  40121970 caagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 40121909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 47710472 - 47710529
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| ||||||||||||||   |||| ||||| ||||||||| |||||||||||    
T  47710472 ctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47710529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 47722128 - 47722185
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagat 77  Q
    |||||||| ||||||||||||||   |||| ||||| ||||||||| |||||||||||    
T  47722128 ctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 20301293 - 20301424
Alignment:
Q  23 acctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattag 122  Q
    ||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||| || ||||||| |||| ||||||||||| ||    
T  20301293 acctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttc-aagatccattgggccacctgctatcag 20301391  T
Q  123 gtttccgctatcggaccacccaccatttatgtc 155  Q
    |||||||||||||||||||||||||||||||||    
T  20301392 gtttccgctatcggaccacccaccatttatgtc 20301424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 21087925 - 21088056
Alignment:
Q  23 acctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattag 122  Q
    ||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||||| || ||||||| |||| ||||||||||| ||    
T  21087925 acctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttc-aagatccattgggccacctgctatcag 21088023  T
Q  123 gtttccgctatcggaccacccaccatttatgtc 155  Q
    |||||||||||||||||||||||||||||||||    
T  21088024 gtttccgctatcggaccacccaccatttatgtc 21088056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 31197642 - 31197779
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgct 117  Q
    ||||||||||  ||| | ||||||||  |||| ||||| |||||||| |||||||||||| |||| |||||||| ||| |||||| |||| |||||||||    
T  31197642 ttctcacctcaaaagtcggttttgtagggttgtgttaggcccaacca-gatttctaagatggtatcagagcctc-tccgagatccattgggccacctgct 31197739  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    || |||||||||||||||||||||||||||||||||||||    
T  31197740 atcaggtttccgctatcggaccacccaccatttatgtcca 31197779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 8084156 - 8084292
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||  ||||||   ||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||| |||| |||| ||||||    
T  8084156 ctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcctc-tccaagatccattgggccacatgctat 8084254  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||| |||||| ||| |||||||||||||||||||    
T  8084255 caggttttcgctattggatcacccaccatttatgtcca 8084292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 39052984 - 39052848
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||| |||||||||||||| ||||||||||||| |||||||||| || | || ||||||||    
T  39052984 ctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggtattagagcctc-tccaagatccatttggccccctgctat 39052886  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||| | ||||||||||||||||||||    
T  39052885 caggtttccgctatccggccacccaccatttatgtcca 39052848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 41790713 - 41790825
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| |||||||| || ||||||| |||| ||||||||||| |||||||||||||||  ||||||||    
T  41790713 gttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttc-aagatccattgggccacctgctatcaggtttccgctatcgagccacccac 41790811  T
Q  146 catttatgtccatg 159  Q
    ||||||||||||||    
T  41790812 catttatgtccatg 41790825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 5932239 - 5932105
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||| |||| |||||| |||| |||||||| |||||||||| ||||||||||| ||||    
T  5932239 ctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctc-tccaagatccattggaccacctactat 5932141  T
Q  120 taggtttccgctatcggaccacccaccatttatgtc 155  Q
     | ||||||| |||||| ||||||||||||||||||    
T  5932140 cacgtttccgttatcgggccacccaccatttatgtc 5932105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 37001255 - 37001409
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctc--caagatccgttggaccacctgct 117  Q
    |||||||| |||||| |||||||  ||||| ||||| ||||||||||||||| ||||| |||| |||||||| ||  |||||||| |||| |||||||||    
T  37001255 ctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagagcctcttcatcaagatccattgggccacctgct 37001354  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttca 172  Q
     | |||||||||||||||| ||||||| |||| || |||| |||| | |||||||    
T  37001355 gtcaggtttccgctatcgggccacccatcattcatttccacgctctagatgttca 37001409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 3157614 - 3157478
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||||||||||   |||| ||||| | ||||||| |||| ||||||  ||| |||||||| ||||| |||| ||||||||||||||||    
T  3157614 ctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctc-tccaaaatccattggaccacctgctat 3157516  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||| |||||||||  |||||||||||||||||||    
T  3157515 caggttttcgctatcgggacacccaccatttatgtcca 3157478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 11232484 - 11232348
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| ||||||| |||    
T  11232484 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacctgttat 11232386  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||   |||||||||||||||||||    
T  11232385 caggtttccgctatcgagtcacccaccatttatgtcca 11232348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 24532475 - 24532352
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||   |||| ||||| |||||||| |||||||||||| |||| |||||| ||| |||||||| |||| |||||||||||     
T  24532475 tcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcc-ccttcaagatccattgggccacctgctatc 24532377  T
Q  121 aggtttccgctatcggaccacccac 145  Q
    |||||||||||||||| ||||||||    
T  24532376 aggtttccgctatcgggccacccac 24532352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 12688103 - 12688237
Alignment:
Q  22 cacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatta 121  Q
    |||||| |||||| |||||||  ||||  ||||||| ||| |||||||||||||||  |||||||||||| || ||||||| |||| ||||||||||| |    
T  12688103 cacctcacaagccggttttgtggagttatgttagactcaaacacgatttctaagatgatattagagcctcttc-aagatccattgggccacctgctatca 12688201  T
Q  122 ggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||  |||| || ||||||||||||||||||||    
T  12688202 ggtttcttctattgggccacccaccatttatgtcca 12688237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 18004332 - 18004248
Alignment:
Q  72 taagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| |||| |||||||| |||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  18004332 taagatggtatcagagcctc-tccaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgtcca 18004248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 159
Target Start/End: Complemental strand, 28213133 - 28213020
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| |||||||||||||||||| || |||| ||| |||||||||||||| ||||| ||||||||||| |||||| |  ||||| ||| |||||    
T  28213133 gttgtgttaggcccaaccacgatttctaatatggtatcagatcctcctccaagatctgttgggccacctgctatcaggttttcattatcgaaccgcccac 28213034  T
Q  146 catttatgtccatg 159  Q
    || |||||||||||    
T  28213033 cacttatgtccatg 28213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 35683000 - 35682935
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35683000 ctccaagatccattgggccacctgctattaggtttccgctatcgggccacccaccatttatgtcca 35682935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 36917455 - 36917358
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||| ||||||||||| |||| |||||||| |||||||||| ||| | ||||  |||||||||||||| |||||||||| ||||||||||||||||    
T  36917455 caaccaccatttctaagatggtatcagagcctc-tccaagatccattgaatcacccactattaggtttccgttatcggaccatccaccatttatgtcca 36917358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 15042915 - 15042803
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctc-ctccaagatccgttggaccacctgctattaggtttccgctatcggaccaccca 144  Q
    |||| ||||| || ||||||||||||||||||  ||| | |||||| ||||||||| | |||| ||||||||||| |||||||||||||| | |||||||    
T  15042915 gttgtgttaggcctaaccacgatttctaagatgttatcatagcctctctccaagattcattgggccacctgctatcaggtttccgctatcaggccaccca 15042816  T
Q  145 ccatttatgtcca 157  Q
    || ||||||||||    
T  15042815 ccgtttatgtcca 15042803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 26208294 - 26208172
Alignment:
Q  30 aagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccg 129  Q
    ||||||||||| |   |||| |||||  ||| |||| ||||||||||| |||| ||||||| ||| |||||||||||| ||||||||||| |||||| |     
T  26208294 aagccagttttatggggttgtgttaggtccatccacaatttctaagatggtatcagagccttctctaagatccgttgggccacctgctatcaggttttcc 26208195  T
Q  130 ctatcggaccacccaccatttat 152  Q
    ||| ||| |||||||||||||||    
T  26208194 ctaacgggccacccaccatttat 26208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 37868638 - 37868505
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||  |||||||  | ||| ||||| || ||||||||||| |||||| |||| | |||||| |||||||||| |||| ||||| |||||    
T  37868638 ctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatcatagcctc-tccaagatccattgggccacccgctat 37868540  T
Q  120 taggtttccgctatcggaccacccaccatttatgt 154  Q
     | ||||||||||| || |||||||||||||||||    
T  37868539 caagtttccgctattgggccacccaccatttatgt 37868505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 422471 - 422372
Alignment:
Q  57 cccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcc 156  Q
    ||||||||| ||||||||||| |||| |||||||    ||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||||||| |||||    
T  422471 cccaaccacaatttctaagatggtatcagagcctaaaacaagatc-gttgggccacctgctatcaggtttccgctctcgggccacccaccatttttgtcc 422373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 4873748 - 4873598
Alignment:
Q  18 ttctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgct 117  Q
    |||||||||| |||||| ||||||| | ||    |||| ||||||||| |||||| ||||  ||| | |||||  ||||| ||  ||||| ||| |||||    
T  4873748 ttctcacctcacaagccggttttgtgttgtcttattaggcccaaccacaatttctcagatgttatcaaagcctt-tccaaaatttgttgggccagctgct 4873650  T
Q  118 attaggtttccgctatcggaccacccaccatttatgtccatgctccaaatgt 169  Q
    || ||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  4873649 atcaggtttccgttattggatcacccaccatttatgtccatgctccaaatgt 4873598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 8716169 - 8716280
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| |||||||||||||| ||||||||| || |||| ||||||| |   ||||||| |||   ||| |||||||||||||||||||||||  |||| ||    
T  8716169 gttgtgttagacccaaccaagatttctaatatggtatcagagccttcgttaagatccattgagtcacatgctattaggtttccgctatcgggtcaccgac 8716268  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  8716269 catttatgtcca 8716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 12317106 - 12317208
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattt 150  Q
    ||||| ||||||||||||||||||||| |||| |||| ||| || | ||| | |||| ||||||| ||| ||||||||| |||||||||||||| |||||    
T  12317106 gttaggcccaaccacgatttctaagatggtatcagagactcttc-acgattctttgggccacctgttatcaggtttccgttatcggaccacccatcattt 12317204  T
Q  151 atgt 154  Q
    ||||    
T  12317205 atgt 12317208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 7669522 - 7669584
Alignment:
Q  95 caagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||| |||  ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  7669522 caagatccattgagccacctgctatcaggtttccactatcggaccacccaccatttatgtcca 7669584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 3157216 - 3157163
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  3157216 ttggaccacctgctatcaggtttccgctatcgggacacccaccatttatgtcca 3157163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 8466744 - 8466647
Alignment:
Q  55 gacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttat 152  Q
    ||||||||||| ||||||||||| |||| | ||| |  | |||||||| |||| ||||||||||| ||||||||||||||   |||||||||||||||    
T  8466744 gacccaaccacaatttctaagatggtatcaaagcttggttcaagatccattgggccacctgctatcaggtttccgctatcaagccacccaccatttat 8466647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 10615470 - 10615559
Alignment:
Q  67 atttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||| |||||||| |||||||||| ||| |||||||| ||| ||||||||||||||||  |||| || |||||| ||||    
T  10615470 atttctaagatggtatcagagcctc-tccaagatccattgtaccacctgatatcaggtttccgctatcgggtcaccaactatttatctcca 10615559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 16050058 - 16050191
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||| |||||||||   |||| ||||||||||||||||| |||||| || |||| ||||||| || || ||| | |||| ||||||| |||    
T  16050058 ctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagagcct-cttcacgattctttgggccacctgttat 16050156  T
Q  120 taggtttccgctatcggaccacccaccatttatgt 154  Q
     || |||||| |||||| ||||||  |||||||||    
T  16050157 cagatttccgttatcgggccacccgtcatttatgt 16050191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 4828097 - 4828237
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||| ||||| || |||| ||||||| || || ||| | |||| ||||||| |||    
T  4828097 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagagcct-cttcacgattctttgggccacctgttat 4828195  T
Q  120 taggtttccgctatcggaccacccaccatttatgtccatgct 161  Q
     ||||||||| |||||| ||| ||  ||||||||| ||||||    
T  4828196 caggtttccgttatcgggccatccgtcatttatgttcatgct 4828237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 20094818 - 20094714
Alignment:
Q  52 ttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccattta 151  Q
    |||| |||||||||||||| |||| | |||| ||||  || || ||||||| |||| |||||| |||| |||||| ||||||| | ||||||||||||||    
T  20094818 ttaggcccaaccacgatttataagttggtatcagagtttcttc-aagatccattgggccacctcctatcaggttttcgctatcaggccacccaccattta 20094720  T
Q  152 tgtcca 157  Q
    ||||||    
T  20094719 tgtcca 20094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 38476098 - 38476159
Alignment:
Q  51 gttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccac 112  Q
    ||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| |||| ||||    
T  38476098 gttaggcccaaccacaatttctaagatggtatcagagcctcctccaagatccattgggccac 38476159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 39052756 - 39052691
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||  || | ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  39052756 ctccaagatcaatttggccacctgctatcaggtttccgctatccggccacccaccatttatgtcca 39052691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 19256875 - 19256753
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||  |||||||   |||| ||||| |||||||||||||||||| || |||| ||||||| || || ||| | |||| ||||||| |||    
T  19256875 ctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-cttcacgattctttgggccacctgttat 19256777  T
Q  120 taggtttccgctatcggaccaccc 143  Q
     ||||||||| |||||| ||||||    
T  19256776 caggtttccgttatcgggccaccc 19256753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 29907920 - 29907865
Alignment:
Q  102 cgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||| ||||||||||| |||||| || |||||| ||||||||||||||||||||    
T  29907920 cgttgggccacctgctatcaggttttcgttatcggtccacccaccatttatgtcca 29907865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 38475776 - 38475875
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||||| ||||||||  |||| ||||| ||||||||| | ||||||||| ||||||| ||| | |||||| |||||  | |||||||||||    
T  38475776 ctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaagatggtattagggccacttccaaggtccgtatggccacctgctat 38475875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 10614955 - 10614858
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||| ||||||  ||| | |||||| |||||||||| ||||||||||||| || | ||||  ||||||||| || ||||||||| ||||||    
T  10614955 caaccacgatttataagatgatatcatagcctc-tccaagatccattggaccacctgcaatcaagtttttgctatcggaacatccaccatttgtgtcca 10614858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 42049702 - 42049605
Alignment:
Q  60 aaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||||||| | || ||| ||||||| |||||||||||| || |||||||     ||||||||||  | |||||||| |||||||||||    
T  42049702 aaccacgatttctaagatggcatcagaacctcctcaaagatccgttgggccgcctgctacctaatttccgctattaggccacccactatttatgtcca 42049605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 7289402 - 7289354
Alignment:
Q  109 ccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||||| |||||||  |||||||||||||||||||||    
T  7289402 ccacctgctatcaggttttcgctatcaaaccacccaccatttatgtcca 7289354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 10615699 - 10615798
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtccat 158  Q
    |||||||| ||||||||||  ||||||| |||| || ||||||| ||  |||||||||||| | |||| |||||||| |||| | ||||||| |||||||    
T  10615699 caaccacggtttctaagatgatattagaacctc-tctaagatccattaaaccacctgctatcacgttttcgctatcgaaccatctaccatttgtgtccat 10615797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 11232249 - 11232158
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccac 112  Q
    |||||||  |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| ||||||| ||||||||||| |||| ||||    
T  11232249 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcct-ctccaagatccattgggccac 11232158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 27439512 - 27439464
Alignment:
Q  121 aggtttccgctatcggaccacccaccatttatgtccatgctccaaatgt 169  Q
    ||||||||| |||||  || |||||||||||||||||||||||||||||    
T  27439512 aggtttccgttatcgagcctcccaccatttatgtccatgctccaaatgt 27439464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 29005919 - 29005967
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctc 94  Q
    |||| ||||||||||||||||||||||||||  ||||||||| ||||||    
T  29005919 gttgtgttagacccaaccacgatttctaagacggtattagagtctcctc 29005967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 31079584 - 31079497
Alignment:
Q  66 gatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    |||||||||||| |||| | | |||| | |||||||| ||||||||| || ||| || ||||| ||||||| |||||||||||||||||    
T  31079584 gatttctaagatggtatcaaaacctc-tacaagatccattggaccacatgttatcagatttccactatcgggccacccaccatttatgt 31079497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 35682836 - 35682780
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    ||||||||||||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  35682836 ctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 39960074 - 39960122
Alignment:
Q  109 ccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| |||||||||||||||  | ||||||||||||||||||    
T  39960074 ccacctgctatcaggtttccgctatcgagctacccaccatttatgtcca 39960122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 7267519 - 7267466
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaa 74  Q
    ||||||| |||||| ||||||||  |||| ||||||||||||||| ||||||||    
T  7267519 tcacctcacaagccggttttgtagggttgtgttagacccaaccaccatttctaa 7267466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 5589930 - 5589894
Alignment:
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  5589930 aggtttccgctatcggatcacccacaatttatgtcca 5589894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 5675936 - 5675888
Alignment:
Q  109 ccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    ||||||||||| | |||| |||||||||  |||||||||||||||||||    
T  5675936 ccacctgctatcaagttttcgctatcgggtcacccaccatttatgtcca 5675888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 10884094 - 10884161
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagc 88  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||| |||| |||||    
T  10884094 ctcacctcacaagccggttttgtgg-gttgtgttaggcccaaccacgatttctaagatggtatcagagc 10884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 25325679 - 25325731
Alignment:
Q  24 cctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||| ||||||||||||||  |||||  |||| ||||||||||||||||||||    
T  25325679 cctcacaagccagttttgtggagttgttttaggcccaaccacgatttctaaga 25325731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 39960221 - 39960277
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  39960221 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 42846660 - 42846604
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaaga 76  Q
    |||||||| |||||| |||||||   |||| ||||| ||||||||||||||||||||    
T  42846660 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 5783 - 5673
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||  ||||||||||| |||||||||||||||||||||||||    
T  5783 gttgtgttaggcccaaccacgatttctaagatggtatcagagcctc-tccaagatccattgagccacctgctatcaggtttccgctatcggaccacccac 5685  T
Q  146 catttatgtcca 157  Q
    ||||||||||||    
T  5684 catttatgtcca 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 1945 - 2081
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||  |||||| |||||||   |||| ||||| ||||||||| ||||||||||| |||| |||||||| |||||||||| |||| ||||||| |||    
T  1945 ctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctc-tccaagatccattgggccacctgttat 2043  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||   |||||||||||||||||||    
T  2044 caggtttccgctatcgagtcacccaccatttatgtcca 2081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 14333 - 14468
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||   |||| ||||| |||||||||| |||||||||| |||| |||||||| |||||||||| |||| |||  || |||     
T  14333 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagagcctc-tccaagatccattgggccatatgttatc 14431  T
Q  121 aggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  14432 aggtttccgctatcgggccacctaccatttatgtcca 14468  T

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Target: scaffold0400 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 3874 - 4010
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||||||||||   |||| ||||| | ||||||| |||||||| || |||| ||| |||| ||||||||||  ||| |||||||||||    
T  3874 ctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctc-tccaagatccactgggccacctgctat 3972  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||| ||||| ||||||    
T  3973 caggtttccgctatcgggccacccatcatttgtgtcca 4010  T

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Target: scaffold0365 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 4518 - 4654
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| ||||||||||||||   |||| ||||| | ||||||| |||||||| || |||| ||| |||| ||||||||||  ||| |||||||||||    
T  4518 ctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctc-tccaagatccactgggccacctgctat 4616  T
Q  120 taggtttccgctatcggaccacccaccatttatgtcca 157  Q
     |||||||||||||||| ||||||| ||||| ||||||    
T  4617 caggtttccgctatcgggccacccatcatttgtgtcca 4654  T

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Target: scaffold0092 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 5693 - 5816
Alignment:
Q  29 caagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttcc 128  Q
    |||||| |||||||   |||| ||||||||||||||||||||||||||| |||| ||||||| || ||| |||| |||| ||||||||||| ||||||||    
T  5693 caagccggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcct-cttcaaaatccattgggccacctgctatcaggtttcc 5791  T
Q  129 gctatcggaccacccaccatttatg 153  Q
    | ||||| | |||||||| ||||||    
T  5792 gttatcgaatcacccaccgtttatg 5816  T

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Target: scaffold0048 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 81897 - 82008
Alignment:
Q  46 gttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccac 145  Q
    |||| ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||| ||||| ||| |||||||| | ||||  |||| |||    
T  81897 gttgtgttaggcccaaccacgatttctaagatggtatcagagcct-ctccaagatccattggactacctgttatcaggtttccac-atcgagccacgcac 81994  T
Q  146 catttatgtccatg 159  Q
    ||||||||||||||    
T  81995 catttatgtccatg 82008  T

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Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 41222 - 41129
Alignment:
Q  59 caaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatg 153  Q
    |||| |||||||||||||| |||| |||||||| |||||||| | |||| ||||||||||| | |||| |||||||| ||||||||| |||||||    
T  41222 caactacgatttctaagatggtatcagagcctc-tccaagattcattgggccacctgctatcaagtttgcgctatcgaaccacccactatttatg 41129  T

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Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 14504 - 14572
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccg-ctatcggaccacccaccatttatgtccatg 159  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||  ||||||| |||||||||||||    
T  14504 ctccaagatccattggaccacctgctatcaggtttccgcctatcgggtcacccactatttatgtccatg 14572  T

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Target: scaffold0366; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 10838 - 10906
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccg-ctatcggaccacccaccatttatgtccatg 159  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| ||  ||||||| |||||||||||||    
T  10838 ctccaagatccattggaccacctgctatcaggtttccgcctattgggtcacccactatttatgtccatg 10906  T

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Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 12676 - 12809
Alignment:
Q  20 ctcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctat 119  Q
    |||||||| |||| |  |||||| | |||| ||||| ||||||||| |||| |||||| ||||||| | ||| ||||||||   |||| |||||| ||||    
T  12676 ctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaagatggtattagcgtctc-tccaagataaattgggccacctactat 12774  T
Q  120 taggtttccgctatcggaccacccaccatttatgt 154  Q
     ||| || |||||||||| ||||||||||||||||    
T  12775 caggatttcgctatcggaacacccaccatttatgt 12809  T

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Target: scaffold0459 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 13197 - 13265
Alignment:
Q  92 ctccaagatccgttggaccacctgctattaggtttccg-ctatcggaccacccaccatttatgtccatg 159  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| ||  ||||||| |||||||||||||    
T  13197 ctccaagatccattggaccacctgctatcaggtttccgcctattgggtcacccactatttatgtccatg 13265  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 56489 - 56642
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctatt 120  Q
    ||||||| |||||| |||||||   |||| ||||| |||||||||||||||||| || |||| ||||||| || ||  || | |||| ||||||| |||     
T  56489 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcct-cttcacaattctttgggccacctgttatc 56587  T
Q  121 aggtttccgctatcggaccacccaccatttatgtccatgctccaaatgttcaatc 175  Q
    |||||| || |||||| ||||||  ||||||||| || ||| || |||| |||||    
T  56588 aggttttcgttatcgggccacccgtcatttatgttcacgcttcagatgtgcaatc 56642  T

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Target: scaffold0729 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 2610 - 2657
Alignment:
Q  108 accacctgctattaggtttccgctatcggaccacccaccatttatgtc 155  Q
    ||||| |||||| |||||||||||||||| |||||| |||||||||||    
T  2610 accacatgctatcaggtttccgctatcgggccaccccccatttatgtc 2657  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 102397 - 102296
Alignment:
Q  55 gacccaaccacgatttctaagatcgtattagagcctcctccaagatccgttggaccacctgctattaggtttccgctatcggaccacccaccatttatgt 154  Q
    ||||||| ||| |||| ||||||  ||| |||| || |||||| |||  |||||| ||||||||| |||||||| |||||||  |||||||||||||| |    
T  102397 gacccaatcacaatttttaagatgatatcagagtcttctccaaaatctattggac-acctgctatcaggtttccactatcgggtcacccaccatttatat 102299  T
Q  155 cca 157  Q
    |||    
T  102298 cca 102296  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 87781 - 87728
Alignment:
Q  104 ttggaccacctgctattaggtttccgctatcggaccacccaccatttatgtcca 157  Q
    |||| ||||||||||| |||||||| |||||||  |||||||||||||| ||||    
T  87781 ttgggccacctgctatcaggtttccactatcgggtcacccaccatttatatcca 87728  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 3525 - 3456
Alignment:
Q  21 tcacctcgcaagccagttttgtatagttgagttagacccaaccacgatttctaagatcgtattagagcct 90  Q
    ||||||| |||||| |||||||   |||| ||||||||||| |||||||||||| || |||| |||||||    
T  3525 tcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaatatggtatcagagcct 3456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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