View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20147_high_29 (Length: 260)

Name: NF20147_high_29
Description: NF20147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20147_high_29
NF20147_high_29
[»] chr3 (35 HSPs)
chr3 (1-236)||(19868941-19869176)
chr3 (121-237)||(30158072-30158188)
chr3 (121-237)||(2784079-2784195)
chr3 (121-220)||(25888513-25888612)
chr3 (121-218)||(42354456-42354553)
chr3 (121-237)||(10963365-10963481)
chr3 (121-237)||(10966874-10966990)
chr3 (121-215)||(20536628-20536722)
chr3 (121-218)||(6173396-6173493)
chr3 (121-214)||(9157969-9158062)
chr3 (29-215)||(27054850-27055041)
chr3 (121-209)||(4225896-4225984)
chr3 (121-237)||(10959858-10959974)
chr3 (121-236)||(2279663-2279778)
chr3 (133-236)||(16314645-16314748)
chr3 (133-236)||(16414811-16414914)
chr3 (133-236)||(18495639-18495742)
chr3 (121-236)||(18883172-18883287)
chr3 (121-236)||(4250344-4250459)
chr3 (133-220)||(5887040-5887127)
chr3 (133-220)||(5897024-5897111)
chr3 (133-236)||(18515785-18515888)
chr3 (133-236)||(23374785-23374888)
chr3 (121-215)||(28327423-28327517)
chr3 (121-215)||(28330748-28330842)
chr3 (131-218)||(9154792-9154879)
chr3 (121-215)||(18551648-18551742)
chr3 (133-236)||(29233644-29233746)
chr3 (131-209)||(54736183-54736262)
chr3 (121-215)||(3305829-3305923)
chr3 (1-61)||(25492036-25492096)
chr3 (121-219)||(36037000-36037097)
chr3 (179-236)||(44508767-44508824)
chr3 (40-176)||(26822222-26822358)
chr3 (129-192)||(11271060-11271122)
[»] chr5 (24 HSPs)
chr5 (1-165)||(1810357-1810521)
chr5 (121-237)||(26548051-26548167)
chr5 (121-237)||(26551610-26551726)
chr5 (121-237)||(28562404-28562520)
chr5 (121-237)||(28565972-28566088)
chr5 (121-237)||(40799961-40800077)
chr5 (121-236)||(19686128-19686243)
chr5 (121-236)||(34652800-34652915)
chr5 (121-218)||(2453259-2453356)
chr5 (121-218)||(3195070-3195167)
chr5 (121-220)||(4731876-4731975)
chr5 (121-215)||(33320969-33321063)
chr5 (135-236)||(17944609-17944710)
chr5 (121-236)||(19689511-19689626)
chr5 (121-215)||(9690742-9690836)
chr5 (121-215)||(2500053-2500147)
chr5 (121-214)||(26337963-26338056)
chr5 (29-205)||(35432442-35432619)
chr5 (133-236)||(26726904-26727007)
chr5 (4-177)||(36330741-36330914)
chr5 (149-236)||(25185345-25185432)
chr5 (30-176)||(36335064-36335210)
chr5 (121-165)||(20077653-20077697)
chr5 (196-236)||(1810528-1810568)
[»] chr7 (34 HSPs)
chr7 (121-238)||(2349415-2349532)
chr7 (121-238)||(22232672-22232789)
chr7 (121-238)||(22253950-22254067)
chr7 (121-238)||(22257214-22257331)
chr7 (121-237)||(11825400-11825516)
chr7 (121-238)||(748086-748203)
chr7 (121-238)||(8257632-8257749)
chr7 (121-238)||(20100600-20100717)
chr7 (121-236)||(8257846-8257961)
chr7 (121-237)||(8397802-8397918)
chr7 (121-236)||(23467213-23467328)
chr7 (121-237)||(5826753-5826869)
chr7 (121-215)||(43549172-43549266)
chr7 (29-215)||(6964266-6964456)
chr7 (133-236)||(2251829-2251932)
chr7 (121-236)||(16546961-16547076)
chr7 (121-236)||(16618586-16618701)
chr7 (133-236)||(23598820-23598923)
chr7 (121-236)||(26182260-26182375)
chr7 (133-220)||(26460439-26460526)
chr7 (135-236)||(22083502-22083603)
chr7 (133-215)||(710074-710156)
chr7 (121-215)||(44017837-44017931)
chr7 (121-209)||(38431378-38431466)
chr7 (29-214)||(26153131-26153320)
chr7 (133-215)||(3541225-3541307)
chr7 (40-218)||(26808694-26808871)
chr7 (121-199)||(42606279-42606356)
chr7 (121-206)||(6214420-6214505)
chr7 (125-207)||(23775868-23775950)
chr7 (72-176)||(28577913-28578017)
chr7 (129-176)||(42859008-42859054)
chr7 (121-159)||(30058196-30058234)
chr7 (131-192)||(17601686-17601747)
[»] chr4 (21 HSPs)
chr4 (121-237)||(18859736-18859852)
chr4 (29-215)||(19928859-19929049)
chr4 (29-215)||(13979113-13979302)
chr4 (121-218)||(10247792-10247889)
chr4 (121-218)||(11702632-11702729)
chr4 (133-218)||(14701882-14701967)
chr4 (29-215)||(15851152-15851342)
chr4 (133-236)||(3719553-3719656)
chr4 (133-220)||(49636581-49636668)
chr4 (121-215)||(23653254-23653348)
chr4 (121-215)||(26703536-26703630)
chr4 (110-236)||(10385899-10386018)
chr4 (133-220)||(3734287-3734374)
chr4 (133-220)||(49639874-49639961)
chr4 (140-242)||(33400392-33400494)
chr4 (121-198)||(17670309-17670386)
chr4 (121-209)||(11560799-11560886)
chr4 (136-206)||(24605307-24605377)
chr4 (121-206)||(7394916-7395000)
chr4 (129-176)||(39050602-39050649)
chr4 (7-108)||(21217499-21217600)
[»] chr2 (19 HSPs)
chr2 (121-237)||(11056299-11056415)
chr2 (121-218)||(29435727-29435824)
chr2 (121-237)||(11059757-11059873)
chr2 (121-218)||(1503478-1503575)
chr2 (121-218)||(1506682-1506779)
chr2 (121-218)||(4577801-4577898)
chr2 (120-236)||(30719733-30719849)
chr2 (121-236)||(15704015-15704130)
chr2 (121-236)||(15719319-15719434)
chr2 (121-237)||(13518262-13518377)
chr2 (133-220)||(18938868-18938955)
chr2 (133-236)||(22592472-22592575)
chr2 (121-215)||(40677817-40677911)
chr2 (29-215)||(38315996-38316186)
chr2 (121-238)||(18011907-18012016)
chr2 (130-218)||(38326319-38326413)
chr2 (2-176)||(40139140-40139314)
chr2 (121-155)||(25925175-25925209)
chr2 (121-162)||(40778988-40779029)
[»] chr8 (22 HSPs)
chr8 (121-236)||(20262514-20262629)
chr8 (121-236)||(21049144-21049259)
chr8 (121-238)||(14187958-14188075)
chr8 (121-238)||(22654219-22654336)
chr8 (121-237)||(5964214-5964330)
chr8 (121-236)||(30645432-30645547)
chr8 (121-235)||(27863599-27863713)
chr8 (133-236)||(17013089-17013192)
chr8 (121-236)||(18696020-18696135)
chr8 (121-215)||(13332068-13332162)
chr8 (133-236)||(17544009-17544112)
chr8 (121-208)||(5828013-5828100)
chr8 (133-215)||(39660014-39660096)
chr8 (133-218)||(24903541-24903626)
chr8 (121-236)||(31981307-31981422)
chr8 (135-226)||(24435000-24435091)
chr8 (135-226)||(24445046-24445137)
chr8 (121-206)||(587302-587387)
chr8 (121-206)||(626535-626620)
chr8 (121-176)||(31986294-31986349)
chr8 (121-159)||(453624-453662)
chr8 (121-165)||(31468169-31468213)
[»] chr6 (30 HSPs)
chr6 (121-236)||(34502301-34502416)
chr6 (121-242)||(5618262-5618383)
chr6 (121-218)||(11410741-11410838)
chr6 (121-237)||(14966188-14966304)
chr6 (29-213)||(35027082-35027270)
chr6 (121-226)||(14969679-14969784)
chr6 (121-236)||(17231814-17231929)
chr6 (121-236)||(28117798-28117913)
chr6 (121-238)||(3826863-3826980)
chr6 (121-209)||(31123418-31123506)
chr6 (121-215)||(15578960-15579054)
chr6 (121-215)||(33679234-33679328)
chr6 (121-218)||(9313830-9313927)
chr6 (136-236)||(22920487-22920587)
chr6 (121-236)||(2331240-2331355)
chr6 (133-215)||(28894538-28894620)
chr6 (121-236)||(12746764-12746882)
chr6 (133-215)||(7560232-7560314)
chr6 (133-215)||(11296195-11296277)
chr6 (121-215)||(2330609-2330703)
chr6 (121-193)||(7560144-7560216)
chr6 (121-215)||(17696569-17696664)
chr6 (129-206)||(20189483-20189560)
chr6 (129-206)||(22146431-22146508)
chr6 (121-173)||(13095764-13095816)
chr6 (135-206)||(16731362-16731433)
chr6 (189-237)||(14969625-14969673)
chr6 (121-162)||(26390970-26391011)
chr6 (121-165)||(6856612-6856656)
chr6 (129-165)||(28974433-28974469)
[»] chr1 (18 HSPs)
chr1 (121-217)||(17902833-17902929)
chr1 (29-213)||(34552633-34552821)
chr1 (121-218)||(49716349-49716446)
chr1 (121-218)||(49719831-49719928)
chr1 (121-237)||(28918332-28918448)
chr1 (121-237)||(37641825-37641941)
chr1 (121-236)||(20981318-20981433)
chr1 (121-215)||(50197004-50197098)
chr1 (29-215)||(6205859-6206050)
chr1 (29-215)||(18392372-18392561)
chr1 (121-215)||(33898305-33898399)
chr1 (110-236)||(20964415-20964540)
chr1 (133-220)||(16838991-16839078)
chr1 (133-220)||(16848921-16849008)
chr1 (133-236)||(24200301-24200404)
chr1 (121-215)||(23441329-23441423)
chr1 (121-213)||(3087770-3087862)
chr1 (121-159)||(5317893-5317931)
[»] scaffold0360 (2 HSPs)
scaffold0360 (121-218)||(2430-2527)
scaffold0360 (121-218)||(6262-6359)
[»] scaffold0062 (2 HSPs)
scaffold0062 (121-236)||(52927-53042)
scaffold0062 (121-236)||(67876-67991)
[»] scaffold0401 (1 HSPs)
scaffold0401 (29-236)||(4217-4428)
[»] scaffold0273 (1 HSPs)
scaffold0273 (121-214)||(19801-19894)
[»] scaffold0134 (1 HSPs)
scaffold0134 (136-236)||(7196-7296)
[»] scaffold0214 (3 HSPs)
scaffold0214 (121-236)||(13565-13679)
scaffold0214 (121-236)||(27581-27695)
scaffold0214 (121-236)||(20014-20129)
[»] scaffold0007 (1 HSPs)
scaffold0007 (29-204)||(92423-92601)
[»] scaffold0012 (1 HSPs)
scaffold0012 (133-236)||(26935-27039)
[»] scaffold0083 (2 HSPs)
scaffold0083 (121-236)||(29280-29395)
scaffold0083 (121-236)||(53077-53192)
[»] scaffold0043 (2 HSPs)
scaffold0043 (121-215)||(13571-13665)
scaffold0043 (121-160)||(5631-5670)
[»] scaffold1048 (1 HSPs)
scaffold1048 (133-218)||(1378-1463)
[»] scaffold0175 (1 HSPs)
scaffold0175 (121-218)||(28704-28801)
[»] scaffold0067 (1 HSPs)
scaffold0067 (133-226)||(27330-27423)
[»] scaffold0014 (1 HSPs)
scaffold0014 (121-176)||(228652-228707)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-157)||(468418-468544)
[»] scaffold1431 (1 HSPs)
scaffold1431 (121-164)||(475-518)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19869176 - 19868941
Alignment:
Q  1 tgcaattaaattggtgtggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||  |||||| ||| ||||    
T  19869176 tgcaattaaattggtttggaatttataataaaacatataatcaagcctttgaatcctctattgttcacggtgaataattttctcatcttctctctcaatg 19869077  T
Q  101 ttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattg 200  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||    
T  19869076 ttcacctaactctatgacggattaactaaatagttttgatcaatctcttgactcaaaactctttcctaagttataactttttaatctcttaaaccaattg 19868977  T
Q  201 aataaccgcggaagcgataacagaacatttattcat 236  Q
    ||||||||||||||| |||||||||| || ||||||    
T  19868976 aataaccgcggaagcaataacagaacgttaattcat 19868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 30158072 - 30158188
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  30158072 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 30158171  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  30158172 aagaacgttaattcatg 30158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 2784195 - 2784079
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||    
T  2784195 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccacagaagcgataa 2784096  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  2784095 aagaacgttaattcatg 2784079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 25888513 - 25888612
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  25888513 attaactaagtagttttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 25888612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 42354456 - 42354553
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||    
T  42354456 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttaaaaccttttaatctcttaaaccgattgaataaccgcagaagcgat 42354553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 10963481 - 10963365
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  10963481 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataactgcggaagcgataa 10963382  T
Q  221 cagaacatttattcatg 237  Q
     || || || |||||||    
T  10963381 aagtacgttaattcatg 10963365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 10966990 - 10966874
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  10966990 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataactgcggaagcgataa 10966891  T
Q  221 cagaacatttattcatg 237  Q
     || || || |||||||    
T  10966890 aagtacgttaattcatg 10966874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 20536628 - 20536722
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  20536628 attaactaaatagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcgaaagc 20536722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 6173396 - 6173493
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  6173396 attatctaagtagttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 6173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 9158062 - 9157969
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||    
T  9158062 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaatttataaccttttaatctcttaaactgattgaataaccgcggaag 9157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 27055041 - 27054850
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||    
T  27055041 taaaacagatgatcaagcctttcgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaatta 27054942  T
Q  125 actaaatagttttgatcaatctcttgactcaaaa-ccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| | |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  27054941 actaagtggttttgatcaatctcttgactcaaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 27054850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 4225896 - 4225984
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  4225896 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgc 4225984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 10959974 - 10959858
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  10959974 attaattaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataactgcggaagcgataa 10959875  T
Q  221 cagaacatttattcatg 237  Q
     || || || |||||||    
T  10959874 aagtacgttaattcatg 10959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 2279663 - 2279778
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||| |||||||||||||||||| |||||||||||      
T  2279663 attaactaagtagttttgatcaatctcttgaatcaaaaccctttcctaagttataaccctttaatctcttaaaccgattgaataactgcggaagcgatgt 2279762  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  2279763 cagaacgttaattcat 2279778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 16314645 - 16314748
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||    
T  16314645 gttttgatcaatctcttgaatcaaaaccctatcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataaaagaacgttaat 16314744  T
Q  233 tcat 236  Q
    ||||    
T  16314745 tcat 16314748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 16414811 - 16414914
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||    
T  16414811 gtttttatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataaaagaacgttaat 16414910  T
Q  233 tcat 236  Q
    ||||    
T  16414911 tcat 16414914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 18495639 - 18495742
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||    
T  18495639 gttttgatcaatctcttgaatcaaaaccctatcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataaaagaacgttaat 18495738  T
Q  233 tcat 236  Q
    ||||    
T  18495739 tcat 18495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 18883287 - 18883172
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||| |||||||||      
T  18883287 attaactaattaattttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccaattgaataaccgtggaagcgatgt 18883188  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  18883187 cagaacgttaattcat 18883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 4250459 - 4250344
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| | |||||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||| |||||| ||      
T  4250459 attaactaagtggttttgatcaatctcttgactcaaaaccctttccgaagttataaccttttaatctcttaaaccgattgaataaccgtggaagctatgt 4250360  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  4250359 cagaacgttaattcat 4250344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 5887040 - 5887127
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  5887040 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 5887127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 5897024 - 5897111
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  5897024 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 5897111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 18515785 - 18515888
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  18515785 gtttttatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 18515884  T
Q  233 tcat 236  Q
    ||||    
T  18515885 tcat 18515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 23374785 - 23374888
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| |||| ||||| || ||    
T  23374785 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagctataaaagaacgttaat 23374884  T
Q  233 tcat 236  Q
    ||||    
T  23374885 tcat 23374888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 28327517 - 28327423
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  28327517 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagc 28327423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 28330842 - 28330748
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  28330842 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagc 28330748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 9154879 - 9154792
Alignment:
Q  131 tagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||  ||||||||    
T  9154879 tagttttgatcaatctcttgactcaaaatcctttcctaagttataaccttttaatctcttaaaccgattgaataaccgttgaagcgat 9154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 18551742 - 18551648
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| | ||||||    
T  18551742 attaactaagtggttttgatcaatctcttgtctcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataacagtggaagc 18551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 29233644 - 29233746
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |||||| ||||||||||| || |||||||||| ||||| || ||    
T  29233644 gttttgatcaatctcttgagtcaaaaccctttct-aagttataaccttttaatctcttaaactgattgaataactgcagaagcgataaaagaacgttaat 29233742  T
Q  233 tcat 236  Q
    ||||    
T  29233743 tcat 29233746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 54736183 - 54736262
Alignment:
Q  131 tagttttgatcaatctcttgactcaaaa-ccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  54736183 tagttttgatcaatctcttgactcaaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgc 54736262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 3305923 - 3305829
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||   ||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  3305923 attaactaagtggttttgatcaatctcttgacacaaaaccctttccggagttataaccttttaatctcttaaatcgattgaataatcgcggaagc 3305829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25492096 - 25492036
Alignment:
Q  1 tgcaattaaattggtgtggaatttataataaaacagataatcaagcctttgaatcctctat 61  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  25492096 tgcaattaaattggtttggaatttataataaaacagataatcaagtctttgaatcctctat 25492036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 36037000 - 36037097
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgata 219  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||| ||||||||   ||||||||||    
T  36037000 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaggttataaccttttaatctcttaaaccga-tgaataactttggaagcgata 36037097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 44508824 - 44508767
Alignment:
Q  179 ttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcat 236  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||| || ||||||    
T  44508824 ttttaatctcttaaaccgattgaataaccgcggaagcgatgtcagaacgttaattcat 44508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 26822222 - 26822358
Alignment:
Q  40 atcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttga 139  Q
    ||||||||||  |||| |||||||  | | ||||||||||||||  |||||| ||| ||||||||||||  | ||   |  ||||||  |||||||||||    
T  26822222 atcaagccttcaaatcatctattgcacactgtgaataatttgctcctcttctttctcaatgttcacctagttttacaactgattaacctaatagttttga 26822321  T
Q  140 tcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    ||||| |||||| ||||||| ||||| ||||||||||    
T  26822322 tcaatttcttgagtcaaaactctttcctaagttataa 26822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 11271122 - 11271060
Alignment:
Q  129 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaa 192  Q
    |||||||||||||||||| || | ||||||||||||| ||||||||||| | ||||||| ||||    
T  11271122 aatagttttgatcaatct-ttaagtcaaaaccctttcctaagttataacctcttaatctcttaa 11271060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 1810357 - 1810521
Alignment:
Q  1 tgcaattaaattggtgtggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  | |||||||| ||||    
T  1810357 tgcaattaaattggtttggaatttataataaaacagataatcaagcctttgaatcctctatcgttcaccgtgaataatttgctccttttctatctcaatg 1810456  T
Q  101 ttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttc 165  Q
    |||||||||||||| | |  |||||||||||||||||||||||||||||||||||||||||||||    
T  1810457 ttcacctaactctacgacggattaactaaatagttttgatcaatctcttgactcaaaaccctttc 1810521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 26548167 - 26548051
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  26548167 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccatggaagcgataa 26548068  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  26548067 aagaacgttaattcatg 26548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 26551726 - 26551610
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  26551726 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccatggaagcgataa 26551627  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  26551626 aagaacgttaattcatg 26551610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 28562404 - 28562520
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  28562404 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccacggaagcgataa 28562503  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  28562504 aagaacgttaattcatg 28562520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 28565972 - 28566088
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  28565972 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccacggaagcgataa 28566071  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  28566072 aagaacgttaattcatg 28566088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 40799961 - 40800077
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  40799961 attaactaagtagttttgatcaatctcttaactcaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgcggaagcgatag 40800060  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  40800061 aagaacgttaattcatg 40800077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 19686243 - 19686128
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  19686243 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 19686144  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  19686143 cagaacgttaattcat 19686128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 34652800 - 34652915
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  34652800 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgatgt 34652899  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  34652900 cagaacgttaattcat 34652915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 2453356 - 2453259
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  2453356 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgtggaagcgat 2453259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 3195167 - 3195070
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3195167 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 3195070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 4731876 - 4731975
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4731876 attaattaagtagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 4731975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 33320969 - 33321063
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  33320969 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 33321063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 17944710 - 17944609
Alignment:
Q  135 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattc 234  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||| || ||||    
T  17944710 tttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgtcagaacgttaattc 17944611  T
Q  235 at 236  Q
    ||    
T  17944610 at 17944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 19689626 - 19689511
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||||  |||||||||      
T  19689626 attaactaattagttttgatcaatctcttgactcaaaaccctttactaagttataaccttttaatctcttaaaccgattgaataaccatggaagcgatgt 19689527  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  19689526 cagaacgttaattcat 19689511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 9690836 - 9690742
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  9690836 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgtggaagc 9690742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 2500053 - 2500147
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||| ||||||||||||||||||||    
T  2500053 attaactaagtggttttgatcaatctcttgactcaaaaccctttcataagttataaccttttaatttcttaaactgattgaataaccgcggaagc 2500147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 26338056 - 26337963
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 214  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||| |||||    
T  26338056 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaagccgattgaataaccgtggaag 26337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 35432442 - 35432619
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaact 127  Q
    |||||||||| ||||||||||| ||||| ||||||| || ||||||||||||||||  ||||   ||| ||||| ||||||||| || | |  |||||||    
T  35432442 taaaacagatgatcaagcctttcgaatcatctattgctcaccgtgaataatttgctcctctttgctctcaatgtccacctaactttacgacggattaact 35432541  T
Q  128 aaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataa 205  Q
     | |||||||||||||||||||||||||||| ||||||  | |||||||| | ||||||| ||||| |||||||||||    
T  35432542 tattagttttgatcaatctcttgactcaaaatcctttccaaggttataacctcttaatctcttaaatcgattgaataa 35432619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 26727007 - 26726904
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||| ||||||||||||| ||||||| || || ||||||||||| ||||||||| |||||||||||||||||  ||||||||||||| ||||| || ||    
T  26727007 gttttaatcaatctcttgaatcaaaactctgtcctaagttataaccttttaatctcttaaaccgattgaataattgcggaagcgataaaagaacgttaat 26726908  T
Q  233 tcat 236  Q
    ||||    
T  26726907 tcat 26726904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 36330914 - 36330741
Alignment:
Q  4 aattaaattggtgtggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttc 103  Q
    |||||||||||| || || ||| | |||||||||| | ||| | || ||||||||| |||  | | ||||||||||||||  |||||| ||| |||||||    
T  36330914 aattaaattggtttgaaaattagattaaaacagatgaacaaactttcgaatcctctgttgcgcactgtgaataatttgctcctcttctctctcaatgttc 36330815  T
Q  104 acctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 177  Q
    |||||||| || | |  ||||||  |||||||||||||||||| ||||||||||||  |||| |||||||||||    
T  36330814 acctaactttacgacggattaacctaatagttttgatcaatcttttgactcaaaactatttcctaagttataac 36330741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 25185432 - 25185345
Alignment:
Q  149 tgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcat 236  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||| ||| ||||||| ||||||||||| |||||||| || ||||||    
T  25185432 tgactcaaaaccctttcctaagttataaccttttaatctcttaaatcgaatgaataatcgcggaagcgacaacagaacgttaattcat 25185345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 36335064 - 36335210
Alignment:
Q  30 aaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaa 129  Q
    ||||||||| |||||||||| |||||||| | ||| |   ||||||||||| ||  |||||| ||| |||||||||||| || || |     |||||  |    
T  36335064 aaaacagatgatcaagccttcgaatcctcaagtgtgcattgtgaataattttctcatcttctctctcaatgttcacctagctttacgatgatttaaccta 36335163  T
Q  130 atagttttgatcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  36335164 atagttttgataaatctcttgactcaaaaccctttcctaagttataa 36335210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 20077697 - 20077653
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 165  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||    
T  20077697 attaacaaaatagttttgatcaatctcttgaatcaaaaccttttc 20077653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 1810528 - 1810568
Alignment:
Q  196 gattgaataaccgcggaagcgataacagaacatttattcat 236  Q
    ||||||||||||||||||||||||||| ||| || ||||||    
T  1810528 gattgaataaccgcggaagcgataacaaaacgttaattcat 1810568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 2349532 - 2349415
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2349532 attaactaagtagttttgatcaatctctcgactcaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgcggaagcgataa 2349433  T
Q  221 cagaacatttattcatgt 238  Q
     ||||| || ||||||||    
T  2349432 aagaacgttaattcatgt 2349415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 22232672 - 22232789
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22232672 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22232771  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  22232772 aagtacgttaattcatgt 22232789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 22254067 - 22253950
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22254067 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22253968  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  22253967 aagtacgttaattcatgt 22253950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 22257331 - 22257214
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22257331 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22257232  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  22257231 aagtacgttaattcatgt 22257214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 11825400 - 11825516
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11825400 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatcttttaaaccgattgaataaccgcggaagcgataa 11825499  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  11825500 aagaacgttaattcatg 11825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 748086 - 748203
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  748086 attaactaagtagttttgatcaatctcctgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 748185  T
Q  221 cagaacatttattcatgt 238  Q
     ||||| || ||||||||    
T  748186 aagaacgttaattcatgt 748203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 8257632 - 8257749
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  8257632 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcaataa 8257731  T
Q  221 cagaacatttattcatgt 238  Q
    |||||||||  |||||||    
T  8257732 cagaacattatttcatgt 8257749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 20100717 - 20100600
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  20100717 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 20100618  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  20100617 aagtacgttaattcatgt 20100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 8257961 - 8257846
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  8257961 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagcgatgt 8257862  T
Q  221 cagaacatttattcat 236  Q
    ||||||||| ||||||    
T  8257861 cagaacattaattcat 8257846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 8397918 - 8397802
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8397918 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagctataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 8397819  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  8397818 aagaacgttaattcatg 8397802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 23467213 - 23467328
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||      
T  23467213 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcgaaagcgatgt 23467312  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  23467313 cagaaccttaattcat 23467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 5826753 - 5826869
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||    
T  5826753 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcagaagcgataa 5826852  T
Q  221 cagaacatttattcatg 237  Q
     || || || |||||||    
T  5826853 aagtacgttaattcatg 5826869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 43549266 - 43549172
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  43549266 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagc 43549172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 6964456 - 6964266
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || ||||| || || | || | ||    
T  6964456 taaaacagatgatcaagcctttcgaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacaaaata 6964357  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| | |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6964356 actaagtggttttgatcaatctcttgactcaaaatcctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 6964266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 2251932 - 2251829
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  2251932 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 2251833  T
Q  233 tcat 236  Q
    ||||    
T  2251832 tcat 2251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 16547076 - 16546961
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| |||||| ||      
T  16547076 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataaccgtggaagctatgt 16546977  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  16546976 cagaacgttaattcat 16546961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 16618586 - 16618701
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| |||||| ||      
T  16618586 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataaccgtggaagctatgt 16618685  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  16618686 cagaacgttaattcat 16618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 23598820 - 23598923
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  23598820 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 23598919  T
Q  233 tcat 236  Q
    ||||    
T  23598920 tcat 23598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 26182375 - 26182260
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    |||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||| || ||||||||||    
T  26182375 attaacaaattagttttgatcaatctcttgagtcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataactgcagaagcgataa 26182276  T
Q  221 cagaacatttattcat 236  Q
     ||||| || ||||||    
T  26182275 aagaacgttaattcat 26182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 26460526 - 26460439
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  26460526 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 26460439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 22083502 - 22083603
Alignment:
Q  135 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattc 234  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| | |||||||||||||||||||||||  |||||| || ||||    
T  22083502 tttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaagcagattgaataaccgcggaagcgatgtcagaacgttaattc 22083601  T
Q  235 at 236  Q
    ||    
T  22083602 at 22083603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 710074 - 710156
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  710074 gttttgatcaatctcttgaatcaaaaccttttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 710156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 44017837 - 44017931
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||| ||||||||||||||||| |||||||||    
T  44017837 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaaattataaccttttaatctcttaaaccgattgaataatcgcggaagc 44017931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 38431466 - 38431378
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    ||||||||| | |||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| |||||||||||||||||||||    
T  38431466 attaactaagtggttttgatcaatctcttgactcaaaaccatttcctcagttataaccttttaatctcttaaaccgattgaataaccgc 38431378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 214
Target Start/End: Complemental strand, 26153320 - 26153131
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| |||| |||||||| || |||||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||    
T  26153320 taaaacagatgatcaagccttttgaattctctattgctcaccgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggatta 26153221  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 214  Q
    ||||| | |||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||| |||||||    
T  26153220 actaagtggttttgattaatctcttgactcaaaaccctttcctaagtcataaccttttaatctcttaaactgattgaataactgcggaag 26153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 3541225 - 3541307
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||| ||||||||||||| ||||||    
T  3541225 gttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctctgaaactgattgaataaccgtggaagc 3541307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 218
Target Start/End: Original strand, 26808694 - 26808871
Alignment:
Q  40 atcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttga 139  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||  ||||   ||  ||||||||||||||| || | |  ||||||| | |||||||||    
T  26808694 atcaagccttcgaatcctctattgctcaccgtgcataatttgctcctctttgctcccaatgttcacctaactttacgacggattaacttattagttttga 26808793  T
Q  140 tcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||| ||||||||||| |||||  || |||||||| | ||||||| || ||  ||||||||||| | |||||||||    
T  26808794 tcaatcttttgactcaaaatccttttctaggttataacctcttaatctctt-aagtgattgaataactgtggaagcgat 26808871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 42606356 - 42606279
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgatt 199  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||| |||||    
T  42606356 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaaattat-accttttaatctcttaaatcgatt 42606279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 6214420 - 6214505
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    ||||||| | ||| |||||||||||||||||||||||  |||||| || |||||||| ||||||||| ||||||||||||||||||    
T  6214420 attaacttattagctttgatcaatctcttgactcaaagtcctttcctaggttataaccttttaatctcttaaaccgattgaataac 6214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 23775950 - 23775868
Alignment:
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataacc 207  Q
    ||||| || |||| ||| |||||||||| |||||| ||||| |||||||||||  |||||||| ||||||| |||||||||||    
T  23775950 actaattaattttcatctatctcttgacacaaaactctttcctaagttataacaatttaatctcttaaaccaattgaataacc 23775868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 28577913 - 28578017
Alignment:
Q  72 gaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagt 171  Q
    |||||||||||   |||||| ||| || ||| ||||| || |||| |  ||||||  ||||||||||||||||||||||| ||||||| ||||| || ||    
T  28577913 gaataatttgcccctcttctctctcaaagttaacctagctttatgacggattaacctaatagttttgatcaatctcttgagtcaaaactctttcctaggt 28578012  T
Q  172 tataa 176  Q
    |||||    
T  28578013 tataa 28578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 42859054 - 42859008
Alignment:
Q  129 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  42859054 aatagttttgatcaatctcttgagtcaaaa-cctttcctaagttataa 42859008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 30058196 - 30058234
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaac 159  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  30058196 attaacaaaatagttttgatcaatcccttgactcaaaac 30058234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 17601747 - 17601686
Alignment:
Q  131 tagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaa 192  Q
    ||||||||||||||||| | | ||||||||| ||| ||||||||||| | ||||||| ||||    
T  17601747 tagttttgatcaatctcctaagtcaaaacccgttcctaagttataacctcttaatctcttaa 17601686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 18859852 - 18859736
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  18859852 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 18859753  T
Q  221 cagaacatttattcatg 237  Q
     ||| | || |||||||    
T  18859752 aagatcgttaattcatg 18859736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 19929049 - 19928859
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || |||||||| || | |  ||||    
T  19929049 taaaacagatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgcctctcttctctctcaaagaaattaacctaactttacgacggatta 19928950  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  19928949 actaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatatcttaaaccgattgaataaccgcggaagc 19928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 13979302 - 13979113
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg--ttcacctaactctatggcatattaa 125  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||| ||||||||   |||||| ||| ||    || ||||| || || | |  |||||    
T  13979302 taaaacagatgatcaagcctttcgaatcctctattgttcactgtgagtaatttgcctctcttctctctcaagaaattaacctagctttacgacggattaa 13979203  T
Q  126 ctaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    |||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  13979202 ctaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagc 13979113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 10247889 - 10247792
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  10247889 attaactaattagttttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatcttttaaactggttgaataaccgcggaagcgat 10247792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 11702632 - 11702729
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||| |||||||||||||||||||||||    
T  11702632 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttaaaaccttttaatctcttaaactgattgaataaccgcggaagcgat 11702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 14701967 - 14701882
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  14701967 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 14701882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 15851342 - 15851152
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||    
T  15851342 taaaacagatgatcaagccttttgaatcctctattgctctccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaatta 15851243  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| | |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  15851242 actaagtggttttgatcaatcttttgactcaaaaccctttcctaagttataaccttttaatctcttaaacagattgaataatcgcggaagc 15851152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 3719553 - 3719656
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  3719553 gttttgatcaatctcttcaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 3719652  T
Q  233 tcat 236  Q
    ||||    
T  3719653 tcat 3719656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 49636581 - 49636668
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  49636581 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 49636668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 23653348 - 23653254
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  23653348 attaactaattagttttgatcaattttttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgtggaagc 23653254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 26703536 - 26703630
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  26703536 attaactaagtggttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagc 26703630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 10386018 - 10385899
Alignment:
Q  110 ctctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||||||||||       ||||| ||||||||| |||||||||||||||||||||    
T  10386018 ctctatgacaaattaactaattagttttgatcaatctcttgactcaaaaccctttc-------ataaccttttaatctcttaaaccgattgaataaccgc 10385926  T
Q  210 ggaagcgataacagaacatttattcat 236  Q
     ||||||||  |||||| || ||||||    
T  10385925 agaagcgatgtcagaacgttaattcat 10385899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 3734374 - 3734287
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||  |||||||||||||    
T  3734374 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataattgcggaagcgataa 3734287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 49639874 - 49639961
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||  |||||||||||||    
T  49639874 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataattgcggaagcgataa 49639961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 33400392 - 33400494
Alignment:
Q  140 tcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcatgtc 239  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||||||| ||||||||||||  |||||  || |||||||||    
T  33400392 tcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttcaaccgattgaataatcgcggaagcgatgtcagaatgttaattcatgtc 33400491  T
Q  240 ata 242  Q
    |||    
T  33400492 ata 33400494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 17670386 - 17670309
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgat 198  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||||||||||    
T  17670386 attaattaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatatcttaaaccgat 17670309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 11560886 - 11560799
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||| ||||||||||| | ||||||| |||||||||||||| ||||||    
T  11560886 attaactaattagttt-gatcaatcttttgactcaaaactctttcctaagttataacctattaatctcttaaaccgattgaacaaccgc 11560799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 24605307 - 24605377
Alignment:
Q  136 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    |||||||||||||||| ||||| ||||||| || |||||||| ||||||||| ||||||||||||||||||    
T  24605307 ttgatcaatctcttgaatcaaagccctttcctaggttataaccttttaatctcttaaaccgattgaataac 24605377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 7394916 - 7395000
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    ||||||| | ||| ||||||||||||||||||||||| |||| |||| ||||||||| ||||||||| ||||||||||||| ||||    
T  7394916 attaacttattagctttgatcaatctcttgactcaaagccctatctt-agttataaccttttaatctcttaaaccgattgattaac 7395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 39050649 - 39050602
Alignment:
Q  129 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  39050649 aatagttttgatcaatcttttgagtcaaaaccctttcttaaattataa 39050602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 21217499 - 21217600
Alignment:
Q  7 taaattggtgtggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacc 106  Q
    ||||||||| || || ||| | |||||||||||||||| ||||  ||||||||||||  | | |||||||||||| |  |||||| ||| |||||| |||    
T  21217499 taaattggtttgaaaattagattaaaacagataatcaatccttcaaatcctctattgcgcactgtgaataatttgattttcttctctctcaatgttaacc 21217598  T
Q  107 ta 108  Q
    ||    
T  21217599 ta 21217600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 11056415 - 11056299
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  11056415 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaatcgattgaataaccgcggaagcgataa 11056316  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  11056315 aagaacgttaattcatg 11056299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 29435824 - 29435727
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  29435824 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgat 29435727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 11059873 - 11059757
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  11059873 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaagcgattgaataaccgcggaagcgataa 11059774  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  11059773 aagaacgttaattcatg 11059757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 1503478 - 1503575
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  1503478 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttaaaaccttttaatctcttaaaccgattgaataaccgcggaagcgat 1503575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 1506682 - 1506779
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  1506682 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttaaaacattttaatctcttaaaccgattgaataaccgcggaagcgat 1506779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 4577898 - 4577801
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||    
T  4577898 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttataatctcttaaaccgattgaataaccgcggaagcgat 4577801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 30719849 - 30719733
Alignment:
Q  120 tattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgata 219  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  30719849 tattaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgatg 30719750  T
Q  220 acagaacatttattcat 236  Q
     |||||| || ||||||    
T  30719749 tcagaacgttaattcat 30719733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 15704015 - 15704130
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||      
T  15704015 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagagatgt 15704114  T
Q  221 cagaacatttattcat 236  Q
    ||||||||| ||||||    
T  15704115 cagaacattaattcat 15704130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 15719319 - 15719434
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| || ||||||||||||||| |||||||||||      
T  15719319 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttcaaccgattgaataactgcggaagcgatgt 15719418  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  15719419 cagaacgttaattcat 15719434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 13518377 - 13518262
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||    
T  13518377 attaactaagtagatttgatcaatctcttgactcaaacccctttcctaagttataaccttttaatctcttaagccgattgaat-accgcggaagcgataa 13518279  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  13518278 aagaacgttaattcatg 13518262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 18938955 - 18938868
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  18938955 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 18938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 22592575 - 22592472
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  22592575 gttttgatcaatctcttgagtcaaaaccctttcctaagtcataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 22592476  T
Q  233 tcat 236  Q
    ||||    
T  22592475 tcat 22592472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 40677817 - 40677911
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  40677817 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagc 40677911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 38315996 - 38316186
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || || || || || | || ||||    
T  38315996 taaaacagatgatcaagcctttcgaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacttagctttacgacaaatta 38316095  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| | || |||||||||||||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  38316096 actaagtggtattgatcaatctcttcactcaaaaccctttcctaagttataaccttttaatatcttaaaccgattgaataactgcggaagc 38316186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 18012016 - 18011907
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||       |||||||||||||||    
T  18012016 attaactaagtagttttgatcaatctcttgactc-aaaccctttcctaagttataaccttttaatctcttaaaccgat-------ccgcggaagcgataa 18011925  T
Q  221 cagaacatttattcatgt 238  Q
     ||||| || ||||||||    
T  18011924 aagaacgttaattcatgt 18011907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 38326319 - 38326413
Alignment:
Q  130 atagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttt------taaaccgattgaataaccgcggaagcgat 218  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |      |||||||||||||||||||||||||||||    
T  38326319 atagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaacctaaaccgattgaataaccgcggaagcgat 38326413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 40139314 - 40139140
Alignment:
Q  2 gcaattaaattggtgtggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgt 101  Q
    |||||||| ||||| || || ||||| ||||||| || |||||||||| ||||||||||||| || | |||||||||||| |  ||||||  || |||||    
T  40139314 gcaattaagttggtttgaaaattatattaaaacaaatgatcaagccttcgaatcctctattgctcactgtgaataatttgttcctcttcttgctcaatgt 40139215  T
Q  102 tcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    ||| |||  | || | || ||||||  ||||||||||||||||||||||| ||||||| ||||  ||||||||||    
T  40139214 tcatctagttttacgacagattaacacaatagttttgatcaatctcttgagtcaaaactcttttctaagttataa 40139140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25925175 - 25925209
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  25925175 attaacaaaatagttttgatcaatctcttgactca 25925209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 40778988 - 40779029
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccct 162  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  40778988 attaacaaaatagatctgatcaatctcttgactcaaaaccct 40779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 20262629 - 20262514
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||      
T  20262629 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaatccgattgaataaccgcggaagcgatgt 20262530  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  20262529 cagaacgttaattcat 20262514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 21049259 - 21049144
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||      
T  21049259 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaatccgattgaataaccgcggaagcgatgt 21049160  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  21049159 cagaacgttaattcat 21049144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 14188075 - 14187958
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  14188075 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagccataa 14187976  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  14187975 aagtacgttaattcatgt 14187958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 22654336 - 22654219
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22654336 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaaattataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22654237  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  22654236 aagtacgttaattcatgt 22654219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 5964330 - 5964214
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5964330 attaactaagtagatttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 5964231  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  5964230 aagaacgttaattcatg 5964214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 30645547 - 30645432
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||      
T  30645547 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttctaaccttttaatcttttaaaccgattgaataaccgtggaagcgatgt 30645448  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  30645447 cagaacgttaattcat 30645432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 27863599 - 27863713
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||||| |||||    
T  27863599 attaactaaatagttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataatcgtggaagagataa 27863698  T
Q  221 cagaacatttattca 235  Q
     ||||| || |||||    
T  27863699 aagaacgttaattca 27863713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 17013089 - 17013192
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||    
T  17013089 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacattaat 17013188  T
Q  233 tcat 236  Q
    ||||    
T  17013189 tcat 17013192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 18696020 - 18696135
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||      
T  18696020 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagagatgt 18696119  T
Q  221 cagaacatttattcat 236  Q
    ||||||||| ||||||    
T  18696120 cagaacattaattcat 18696135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 13332162 - 13332068
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  13332162 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagc 13332068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 17544112 - 17544009
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||    
T  17544112 gttttgatcaatatcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacattaat 17544013  T
Q  233 tcat 236  Q
    ||||    
T  17544012 tcat 17544009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 5828100 - 5828013
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccg 208  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  5828100 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccg 5828013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 39660014 - 39660096
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  39660014 gttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagc 39660096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 24903541 - 24903626
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  24903541 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagcgat 24903626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 31981422 - 31981307
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||| || |  ||||||||| ||||||||||||||||||| || |||||||      
T  31981422 attaactaattagttttgatcaatctcttgattcaaaaccctttcataagtaatgatcttttaatctcttaaaccgattgaataaccacgaaagcgatgt 31981323  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  31981322 cagaacgttaattcat 31981307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 24435091 - 24435000
Alignment:
Q  135 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaac 226  Q
    |||| |||||||||||| |||||||| |||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  24435091 tttggtcaatctcttgaatcaaaaccttttcctaggttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaac 24435000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 24445137 - 24445046
Alignment:
Q  135 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaac 226  Q
    |||| |||||||||||| |||||||| |||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  24445137 tttggtcaatctcttgaatcaaaaccttttcctaggttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaac 24445046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 587387 - 587302
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||| ||||||||||||    
T  587387 attaacttattagctttgatcaatctcttgactcaaagccctttcctaggttataaccttttaatctcttaaatcgattgaataac 587302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 626535 - 626620
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||| ||||||||||||    
T  626535 attaacttattagctttgatcaatctcttgactcaaagccctttcctaggttataaccttttaatctcttaaatcgattgaataac 626620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 31986349 - 31986294
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  31986349 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtaataa 31986294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 453662 - 453624
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaac 159  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  453662 attaactaagtagttttgatcaatctcttgactcaaaac 453624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 31468169 - 31468213
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 165  Q
    ||||||| ||||||||| ||||||||||||| ||||||| |||||    
T  31468169 attaactcaatagttttcatcaatctcttgagtcaaaacactttc 31468213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 34502416 - 34502301
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  34502416 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 34502317  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  34502316 cagaacgttaattcat 34502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 5618262 - 5618383
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  5618262 attaactaattagttttgatcaatctcttcactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagcgatgt 5618361  T
Q  221 cagaacatttattcatgtcata 242  Q
    |||||| || |||||| |||||    
T  5618362 cagaacgttaattcatatcata 5618383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 11410838 - 11410741
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  11410838 attaactaaggagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 11410741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 14966304 - 14966188
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14966304 attaactaagtagatttgatcaatctcttgactcaaacccctttcctaggttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 14966205  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  14966204 aagaacgttaattcatg 14966188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 35027082 - 35027270
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || |  ||| ||||||||   |||||| ||| || |   || ||||| || || | || ||||    
T  35027082 taaaacagatgatcaagcctttcgaatcctctattgctcactatgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacagatta 35027181  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaa 213  Q
    ||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  35027182 actaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaa 35027270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 14969784 - 14969679
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14969784 attaactaagtagatttgatcaatctcttgactcaaaatcctttcataggttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 14969685  T
Q  221 cagaac 226  Q
     |||||    
T  14969684 aagaac 14969679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 17231929 - 17231814
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||  ||||||||||||||||||||||      
T  17231929 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagtcataaccttttaatctcttaaactaattgaataaccgcggaagcgatgt 17231830  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  17231829 cagaacgttaattcat 17231814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 28117913 - 28117798
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  28117913 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagcgatgt 28117814  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  28117813 cagaacgttaattcat 28117798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 3826863 - 3826980
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||  ||| |||||    
T  3826863 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcaaaagggataa 3826962  T
Q  221 cagaacatttattcatgt 238  Q
     || || || ||||||||    
T  3826963 aagtacgttaattcatgt 3826980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 31123506 - 31123418
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  31123506 attaactaattagttttgatcaatctcttaactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgc 31123418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 15578960 - 15579054
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||| |||||||    
T  15578960 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccacggaagc 15579054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 33679234 - 33679328
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  33679234 attaactaagtggttttgatcaatctcttaactcaaaaccctttcgtaagttataacattttaatctcttaaaccgattgaataactgcggaagc 33679328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 9313830 - 9313927
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||||||||    
T  9313830 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatatcttaaaccgattgaataactgcggaagcgat 9313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 22920587 - 22920487
Alignment:
Q  136 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattca 235  Q
    |||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| || |||||||||| ||||| || |||||    
T  22920587 ttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcagaagcgataaaagaacgttaattca 22920488  T
Q  236 t 236  Q
    |    
T  22920487 t 22920487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 2331355 - 2331240
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| |||||||||||| |||||||| ||      
T  2331355 attaactaagtacttttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatctcttaaatcgattgaataactgcggaagctatgt 2331256  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  2331255 cagaacgttaattcat 2331240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 28894538 - 28894620
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||| |||||    
T  28894538 gttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccaattgaataaccgcagaagc 28894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 12746882 - 12746764
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatc---ttttaaaccgattgaataaccgcggaagcga 217  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||   | |||||||||||||||||||| |||||| |    
T  12746882 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttattaaaccgattgaataaccgtggaagcta 12746783  T
Q  218 taacagaacatttattcat 236  Q
    |  |||||| || ||||||    
T  12746782 tgtcagaacgttaattcat 12746764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 7560232 - 7560314
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||| |||||||||||||||||| ||||||||    
T  7560232 gttttgatcaatctcttgactcaaaactctttcctaagctataaccttttaatctcttaaaccgattgaataactgcggaagc 7560314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 11296195 - 11296277
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||||||||||| |||||||||||||| || ||||||| ||||||||| | |||||||||||||||||||||||||    
T  11296195 gttttgatcaatctcttgattcaaaaccctttctcaaattataacattttaatctctaaaaccgattgaataaccgcggaagc 11296277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 2330703 - 2330609
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| || ||||||| |||||||||||| |||||| |||| ||||||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  2330703 attaactaagtacttttgattaatctcttgactgaaaaccatttcataagttataaccttttaatctattaaaccgattgaataactgcgaaagc 2330609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 7560144 - 7560216
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaa 193  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||    
T  7560144 attaactaattagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaa 7560216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 17696664 - 17696569
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataact-ttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | | ||||||||||||||||||||||||||||||  |||||||||||| | ||||||| | || | ||||||||||||||||||||    
T  17696664 attaactaagtggctttgatcaatctcttgactcaaaaccctttactaagttataactctattaatctctaaatcagattgaataaccgcggaagc 17696569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 20189483 - 20189560
Alignment:
Q  129 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    ||||| ||||||||||| ||||||||||| | ||||| || |||||||| ||||||||| ||||||||||||||||||    
T  20189483 aatagctttgatcaatcacttgactcaaatcactttcctaggttataaccttttaatctcttaaaccgattgaataac 20189560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 22146508 - 22146431
Alignment:
Q  129 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    ||||| ||||||||||| ||||||||||| | ||||| || |||||||| ||||||||| ||||||||||||||||||    
T  22146508 aatagctttgatcaatcacttgactcaaatcactttcctaggttataaccttttaatctcttaaaccgattgaataac 22146431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 13095764 - 13095816
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13095764 attaactaaatagttttgatcaatctcttaactcaaaaccctttcctaagtta 13095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 16731433 - 16731362
Alignment:
Q  135 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 206  Q
    |||||||||||||||||||||||  |||||| || |||||||| ||||||||| |||| |||||||||||||    
T  16731433 tttgatcaatctcttgactcaaagtcctttcctaggttataaccttttaatctcttaagccgattgaataac 16731362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 14969673 - 14969625
Alignment:
Q  189 ttaaaccgattgaataaccgcggaagcgataacagaacatttattcatg 237  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||    
T  14969673 ttaaaccgattgaataaccgcggaagcgataaaagaacgttaattcatg 14969625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 26391011 - 26390970
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccct 162  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  26391011 attaacaaaatagttttgatcaatctcttgattcaaaaccct 26390970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 6856656 - 6856612
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 165  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||    
T  6856656 attaacttaataattttgatcaatctcttgattcaaaaccctttc 6856612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 28974433 - 28974469
Alignment:
Q  129 aatagttttgatcaatctcttgactcaaaaccctttc 165  Q
    |||||||||||||||||||| || |||||||||||||    
T  28974433 aatagttttgatcaatctctagagtcaaaaccctttc 28974469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 17902833 - 17902929
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcga 217  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  17902833 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcga 17902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 34552633 - 34552821
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||| ||||| ||||||||||| ||||||||||||| || |||||| ||||||||   |||||| |||||| |   || ||||| || || | || ||||    
T  34552633 taaagcagatgatcaagcctttcgaatcctctattgctcaccgtgagtaatttgcctctcttctctcttaaagaaattaacctagctttacgacaaatta 34552732  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaa 213  Q
    ||||| | |||||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||    
T  34552733 actaagtggttttgatcaatctcttgactcaaaaccctttccaaagttataaccttttaatctcttaaaccgattgaataaccgcggaa 34552821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 49716446 - 49716349
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  49716446 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcggaagcgat 49716349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 49719928 - 49719831
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  49719928 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcggaagcgat 49719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 28918448 - 28918332
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||| |||||     
T  28918448 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcggaaacgatac 28918349  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  28918348 aagaacgttaattcatg 28918332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 37641941 - 37641825
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| || |||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  37641941 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaggttataaccttgtaatctcttaaaccgattgaataaccgcggaagcgataa 37641842  T
Q  221 cagaacatttattcatg 237  Q
     ||||| || |||||||    
T  37641841 aagaacgttaattcatg 37641825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 20981433 - 20981318
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||     
T  20981433 attaactaagtagttttgatcaatctcttgaatcaaaatcctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcaatat 20981334  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  20981333 cagaacgttaattcat 20981318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 50197004 - 50197098
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  50197004 attaactaaatggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgtggaagc 50197098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 6206050 - 6205859
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||    
T  6206050 taaaacagatgatcaagccttttgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaatta 6205951  T
Q  125 actaaatagttttgatcaatctcttgactcaaaa-ccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| |  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6205950 actaagtgattttgatcaatctcttgactcaaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgcggaagc 6205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 18392561 - 18392372
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || || ||| ||||||||   |||||| ||| || |   || ||||| || || | || ||||    
T  18392561 taaaacagatgatcaagcctttcgaatcctctattgctcaccatgagtaatttgcctatcttctctctcaaagaaattaacctagctttacgacaaatta 18392462  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |||||||||||||||||||||||||||    
T  18392461 actaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaa-ctcttaaaccgattgaataaccgcggaagc 18392372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 33898399 - 33898305
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  33898399 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagc 33898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 20964540 - 20964415
Alignment:
Q  110 ctctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 209  Q
    ||||||| || ||||||||| ||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||| |||||||||| ||    
T  20964540 ctctatgacaaattaactaagtagttttgatcaatctcttgaatcaaa-ccctttcctaagttataaccttttaatctcttaaaccaattgaataactgc 20964442  T
Q  210 ggaagcgataacagaacatttattcat 236  Q
    |||||| ||| |||||| || ||||||    
T  20964441 ggaagcaatatcagaacgttaattcat 20964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 16838991 - 16839078
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  16838991 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcaataa 16839078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 16848921 - 16849008
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  16848921 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcaataa 16849008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 24200301 - 24200404
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 232  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||  |||| |||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  24200301 gttttgatcaatctcttgaatcaaaaccctttcctaagttataatctttttatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 24200400  T
Q  233 tcat 236  Q
    ||||    
T  24200401 tcat 24200404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 23441329 - 23441423
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  23441329 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgaatgaataatcgcggaagc 23441423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 3087770 - 3087862
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaa 213  Q
    ||||||||| | |||||||||||||||| |||||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  3087770 attaactaagtggttttgatcaatctctcgactcaaaactctttactaagttataaccttttaatctcttaaaccgattgaataactgcggaa 3087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 5317893 - 5317931
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaac 159  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  5317893 attaacaaaatagttttgatcaatctcttgaatcaaaac 5317931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 2527 - 2430
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  2527 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagcgat 2430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 6359 - 6262
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  6359 attaattaagtagttttgatcaatctcttgactcaaaatcctttcctaagttataaccttttaatctcttaaaccgattaaataatcgcggaagcgat 6262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 52927 - 53042
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||      
T  52927 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagagatgt 53026  T
Q  221 cagaacatttattcat 236  Q
    ||||||||| ||||||    
T  53027 cagaacattaattcat 53042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 67876 - 67991
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| || ||||||||||||||| |||||||||||      
T  67876 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttcaaccgattgaataactgcggaagcgatgt 67975  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  67976 cagaacgttaattcat 67991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 236
Target Start/End: Complemental strand, 4428 - 4217
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatatta 124  Q
    |||||||||| ||||||||||| ||||||||||||| || | || | ||||||||  ||||||| ||| || |   || ||||| || |||| |  ||||    
T  4428 taaaacagatgatcaagcctttcgaatcctctattgctcactgtaagtaatttgcctgtcttctctctcaaagaaattaacctagctttatgacggatta 4329  T
Q  125 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacaga 224  Q
    ||||| | |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |||||| ||  ||||    
T  4328 actaagtggttttgatcaatcttttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgtggaagctatgtcaga 4229  T
Q  225 acatttattcat 236  Q
    || || ||||||    
T  4228 acgttaattcat 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 19801 - 19894
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 214  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  19801 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaag 19894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 7296 - 7196
Alignment:
Q  136 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattca 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||| || |||||    
T  7296 ttgatcaatctcttgactcaaaaccttttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgatgtcagaacgttaattca 7197  T
Q  236 t 236  Q
    |    
T  7196 t 7196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 13679 - 13565
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  13679 attaactaattagtttc-atcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 13581  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  13580 cagaacgttaattcat 13565  T

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Target: scaffold0214; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 27695 - 27581
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  27695 attaactaattagtttc-atcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 27597  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  27596 cagaacgttaattcat 27581  T

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Target: scaffold0214; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 20129 - 20014
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    |||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||      
T  20129 attaacaaattagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatcgcttaaaccgattgaataaccgcagaagccatgt 20030  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  20029 cagaacgttaattcat 20014  T

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Target: scaffold0007 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 92601 - 92423
Alignment:
Q  29 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg--ttcacctaactctatggcatattaa 125  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||| ||||||||   |||||| ||| ||    || ||||| || || | |  |||||    
T  92601 taaaacagatgatcaagcctttcgaatcctctattgttcactgtgagtaatttgcctctcttctctctcaagaaattaacctagctttacgacggattaa 92502  T
Q  126 ctaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaata 204  Q
    |||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  92501 ctaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaata 92423  T

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Target: scaffold0012 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 26935 - 27039
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataac-tttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacattta 231  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||| || |    
T  26935 gttttgatcaatctcttgagtcaaaaccctttcctaagtcataacctttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaa 27034  T
Q  232 ttcat 236  Q
    |||||    
T  27035 ttcat 27039  T

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Target: scaffold0083 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 29395 - 29280
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |  ||||||||||||||||||| |||||| ||      
T  29395 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatttcctaaaccgattgaataaccgtggaagctatgt 29296  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  29295 cagaacgttaattcat 29280  T

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Target: scaffold0083; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 53192 - 53077
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 220  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| | |||||||||||||||| | |||||| ||      
T  53192 attaactaagtggttttgatcaatctcttgactcaaaaccccttcttaagttataaccttttcatctctcaaaccgattgaataactgtggaagctatgt 53093  T
Q  221 cagaacatttattcat 236  Q
    |||||| || ||||||    
T  53092 cagaacgttaattcat 53077  T

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Target: scaffold0043 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 13665 - 13571
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 215  Q
    ||||||||| | |||||||||||||| |||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  13665 attaactaagtggttttgatcaatctattgactcaaaaccctttcctaagttatacccttttaatctcttaaaccgattgaataaccgtggaagc 13571  T

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Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 5670 - 5631
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaacc 160  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  5670 attaactaagtggttttgatcaatctcttgactcaaaacc 5631  T

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Target: scaffold1048 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 1463 - 1378
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  1463 gttttgatcaatatcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgat 1378  T

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Target: scaffold0175 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 28704 - 28801
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 218  Q
    |||||| || || ||||||| |||||||||| ||||||||||||| ||||||||||| ||||||| | |||||| |||||||||||||||||||||||    
T  28704 attaacaaattaattttgataaatctcttgaatcaaaaccctttcctaagttataaccttttaatgtcttaaacagattgaataaccgcggaagcgat 28801  T

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Target: scaffold0067 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 27423 - 27330
Alignment:
Q  133 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaac 226  Q
    |||||| |||||||||||| |||||||| |||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  27423 gttttgttcaatctcttgaatcaaaaccttttcctaggttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaac 27330  T

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Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 228707 - 228652
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  228707 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtaataa 228652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 468418 - 468544
Alignment:
Q  29 taaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaacta 128  Q
    ||||||| || |||||||||| ||||  ||||||| || | ||||||||||||||  |||||| ||  ||||||||||||  | || | || ||||||      
T  468418 taaaacatatgatcaagccttcgaattgtctattgctcactgtgaataatttgctcctcttctctc--aatgttcacctagttttacgacagattaaccc 468515  T
Q  129 aatagttttgatcaatctcttgactcaaa 157  Q
    ||||||||||||||||||||||| |||||    
T  468516 aatagttttgatcaatctcttgaatcaaa 468544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 475 - 518
Alignment:
Q  121 attaactaaatagttttgatcaatctcttgactcaaaacccttt 164  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  475 attaacaaaatagttttgatcaatctcttgagtcaaaatccttt 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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