View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20147_low_20 (Length: 355)

Name: NF20147_low_20
Description: NF20147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20147_low_20
NF20147_low_20
[»] chr7 (45 HSPs)
chr7 (55-155)||(29065820-29065922)
chr7 (55-155)||(5644678-5644780)
chr7 (146-210)||(30080414-30080478)
chr7 (152-203)||(37460583-37460634)
chr7 (60-155)||(21635941-21636038)
chr7 (146-203)||(19865670-19865727)
chr7 (146-210)||(35456184-35456248)
chr7 (146-200)||(30629438-30629492)
chr7 (55-124)||(2057396-2057465)
chr7 (146-203)||(2411691-2411748)
chr7 (146-203)||(9784567-9784624)
chr7 (146-203)||(40496098-40496155)
chr7 (146-210)||(14602877-14602941)
chr7 (146-210)||(22391208-22391272)
chr7 (147-203)||(28538790-28538846)
chr7 (86-155)||(46069423-46069494)
chr7 (152-210)||(14790467-14790524)
chr7 (55-149)||(40110738-40110835)
chr7 (55-120)||(6498758-6498823)
chr7 (55-124)||(18789235-18789304)
chr7 (146-203)||(40667717-40667774)
chr7 (55-124)||(44915196-44915265)
chr7 (147-203)||(42816903-42816959)
chr7 (56-124)||(43955603-43955671)
chr7 (55-118)||(43955518-43955581)
chr7 (152-210)||(36328434-36328492)
chr7 (146-200)||(39342277-39342330)
chr7 (55-124)||(9784920-9784989)
chr7 (55-124)||(23548600-23548669)
chr7 (55-124)||(26162126-26162195)
chr7 (55-124)||(31632723-31632792)
chr7 (55-123)||(34398938-34399007)
chr7 (55-124)||(40110827-40110896)
chr7 (55-119)||(30524256-30524320)
chr7 (152-200)||(41442720-41442768)
chr7 (146-194)||(43791403-43791451)
chr7 (158-198)||(45967296-45967336)
chr7 (155-198)||(25188910-25188953)
chr7 (157-203)||(26416312-26416357)
chr7 (46-124)||(28539157-28539235)
chr7 (46-124)||(35776944-35777022)
chr7 (146-200)||(46700543-46700597)
chr7 (55-124)||(29065908-29065977)
chr7 (55-124)||(34388354-34388423)
chr7 (146-190)||(40495579-40495622)
[»] chr8 (50 HSPs)
chr8 (55-155)||(3853617-3853719)
chr8 (55-155)||(3858075-3858177)
chr8 (153-210)||(9983034-9983091)
chr8 (147-203)||(40733748-40733804)
chr8 (147-203)||(44346334-44346390)
chr8 (146-200)||(33376947-33377001)
chr8 (55-121)||(40046805-40046871)
chr8 (73-155)||(13404883-13404967)
chr8 (55-149)||(17110931-17111027)
chr8 (146-203)||(43185359-43185416)
chr8 (55-120)||(44889355-44889420)
chr8 (155-203)||(7079686-7079734)
chr8 (55-119)||(33902668-33902732)
chr8 (152-203)||(29611711-29611762)
chr8 (55-121)||(28324678-28324744)
chr8 (160-210)||(34009082-34009132)
chr8 (56-150)||(4156228-4156324)
chr8 (165-210)||(6416524-6416569)
chr8 (156-203)||(29257026-29257073)
chr8 (60-118)||(8689138-8689196)
chr8 (146-200)||(10593452-10593505)
chr8 (55-121)||(17110870-17110936)
chr8 (152-210)||(26520088-26520146)
chr8 (153-203)||(31980163-31980212)
chr8 (55-121)||(42711372-42711438)
chr8 (55-120)||(515549-515614)
chr8 (147-200)||(8049556-8049609)
chr8 (154-199)||(13144972-13145017)
chr8 (55-124)||(23011735-23011804)
chr8 (55-124)||(24044961-24045030)
chr8 (146-199)||(31976235-31976288)
chr8 (55-124)||(33377310-33377379)
chr8 (155-200)||(35404403-35404448)
chr8 (156-209)||(35978699-35978752)
chr8 (55-120)||(36103102-36103167)
chr8 (146-190)||(24045342-24045386)
chr8 (146-190)||(24051650-24051694)
chr8 (155-203)||(36624923-36624971)
chr8 (160-203)||(8409347-8409390)
chr8 (158-201)||(28190346-28190389)
chr8 (152-199)||(29482458-29482504)
chr8 (73-123)||(8049273-8049323)
chr8 (153-203)||(31976782-31976831)
chr8 (92-155)||(42739969-42740034)
chr8 (147-200)||(1087963-1088016)
chr8 (147-192)||(10605902-10605947)
chr8 (55-124)||(33986005-33986074)
chr8 (55-111)||(1088303-1088359)
chr8 (55-111)||(14991693-14991749)
chr8 (55-99)||(27322687-27322731)
[»] chr2 (42 HSPs)
chr2 (55-155)||(27033491-27033593)
chr2 (46-158)||(41461568-41461682)
chr2 (146-210)||(8736071-8736135)
chr2 (55-124)||(11716409-11716478)
chr2 (146-210)||(2925030-2925094)
chr2 (146-203)||(1583445-1583502)
chr2 (146-203)||(11141684-11141741)
chr2 (146-203)||(44256013-44256070)
chr2 (146-200)||(769410-769464)
chr2 (55-121)||(784794-784860)
chr2 (152-210)||(13018130-13018188)
chr2 (152-210)||(14306470-14306528)
chr2 (146-200)||(33188906-33188960)
chr2 (55-124)||(14365701-14365770)
chr2 (55-124)||(14537200-14537269)
chr2 (55-119)||(14365793-14365857)
chr2 (147-203)||(39630606-39630662)
chr2 (55-158)||(784846-784951)
chr2 (146-200)||(7167305-7167359)
chr2 (146-203)||(7309549-7309606)
chr2 (146-203)||(28021819-28021876)
chr2 (146-203)||(35047314-35047371)
chr2 (146-203)||(44205304-44205361)
chr2 (146-206)||(19231126-19231186)
chr2 (146-210)||(21504830-21504893)
chr2 (152-203)||(41585307-41585358)
chr2 (146-200)||(3092624-3092678)
chr2 (155-200)||(17906029-17906074)
chr2 (55-123)||(7228016-7228084)
chr2 (152-200)||(19072259-19072306)
chr2 (155-199)||(32839304-32839348)
chr2 (155-190)||(32839842-32839877)
chr2 (152-190)||(7611547-7611585)
chr2 (55-125)||(8735845-8735915)
chr2 (55-121)||(17180298-17180364)
chr2 (62-124)||(30698289-30698351)
chr2 (55-124)||(10480120-10480189)
chr2 (55-124)||(17905655-17905724)
chr2 (55-119)||(3092283-3092347)
chr2 (56-124)||(11532256-11532324)
chr2 (56-124)||(11793897-11793965)
chr2 (92-149)||(14537261-14537320)
[»] chr4 (55 HSPs)
chr4 (55-155)||(10128030-10128132)
chr4 (55-155)||(15660239-15660341)
chr4 (55-155)||(42844544-42844646)
chr4 (147-209)||(52294705-52294767)
chr4 (146-203)||(2126216-2126273)
chr4 (55-149)||(36455908-36456004)
chr4 (146-209)||(31947951-31948014)
chr4 (157-203)||(17727800-17727846)
chr4 (146-203)||(41139850-41139907)
chr4 (155-203)||(16299890-16299938)
chr4 (152-210)||(4490404-4490461)
chr4 (92-155)||(26250965-26251030)
chr4 (55-121)||(28845963-28846029)
chr4 (55-124)||(14982281-14982350)
chr4 (59-149)||(28845876-28845968)
chr4 (55-124)||(36456015-36456084)
chr4 (55-124)||(41498579-41498648)
chr4 (55-124)||(49111401-49111470)
chr4 (55-124)||(55266864-55266933)
chr4 (55-155)||(41498490-41498593)
chr4 (154-210)||(42776471-42776527)
chr4 (154-210)||(47108606-47108662)
chr4 (146-200)||(46242739-46242791)
chr4 (55-121)||(857331-857397)
chr4 (62-124)||(1539649-1539711)
chr4 (56-139)||(7352814-7352899)
chr4 (146-192)||(35470501-35470547)
chr4 (55-149)||(1107114-1107210)
chr4 (55-124)||(1112606-1112675)
chr4 (55-120)||(7352905-7352970)
chr4 (55-120)||(16516172-16516237)
chr4 (146-203)||(21782352-21782408)
chr4 (154-203)||(27284333-27284382)
chr4 (55-124)||(31473850-31473919)
chr4 (146-203)||(54566552-54566609)
chr4 (56-124)||(4896721-4896789)
chr4 (56-124)||(10127976-10128044)
chr4 (158-202)||(17727436-17727480)
chr4 (57-124)||(10633035-10633102)
chr4 (155-190)||(24705716-24705751)
chr4 (152-198)||(13088430-13088476)
chr4 (55-101)||(31742876-31742922)
chr4 (146-192)||(40547893-40547939)
chr4 (158-200)||(56118286-56118328)
chr4 (55-120)||(467896-467959)
chr4 (55-112)||(4441338-4441395)
chr4 (55-120)||(5715745-5715810)
chr4 (55-124)||(11040969-11041037)
chr4 (154-203)||(28751857-28751906)
chr4 (146-210)||(9449516-9449580)
chr4 (55-123)||(11348327-11348395)
chr4 (152-200)||(26534871-26534919)
chr4 (156-200)||(42775897-42775941)
chr4 (155-203)||(46242279-46242327)
chr4 (146-190)||(53760439-53760483)
[»] chr1 (50 HSPs)
chr1 (59-155)||(34756432-34756530)
chr1 (55-155)||(38277416-38277518)
chr1 (147-210)||(41822179-41822242)
chr1 (55-149)||(15034660-15034756)
chr1 (146-210)||(44571570-44571634)
chr1 (55-155)||(50005080-50005182)
chr1 (55-152)||(27804324-27804423)
chr1 (55-124)||(15034748-15034817)
chr1 (55-124)||(23536068-23536137)
chr1 (146-203)||(28632239-28632296)
chr1 (152-200)||(32128468-32128516)
chr1 (152-204)||(41577918-41577970)
chr1 (152-203)||(15467599-15467650)
chr1 (57-149)||(45565397-45565491)
chr1 (92-155)||(32572960-32573025)
chr1 (92-155)||(40264068-40264133)
chr1 (152-210)||(44571063-44571121)
chr1 (55-124)||(4038076-4038145)
chr1 (55-124)||(6470689-6470758)
chr1 (55-120)||(26501086-26501151)
chr1 (55-124)||(30190225-30190294)
chr1 (147-210)||(32647672-32647736)
chr1 (152-199)||(946766-946813)
chr1 (146-189)||(34003762-34003805)
chr1 (152-203)||(48953931-48953982)
chr1 (156-210)||(6470335-6470389)
chr1 (55-121)||(27935577-27935643)
chr1 (92-155)||(37214875-37214939)
chr1 (157-203)||(41822841-41822887)
chr1 (55-149)||(4038137-4038233)
chr1 (55-124)||(24273223-24273292)
chr1 (55-120)||(32287940-32288005)
chr1 (157-210)||(37447532-37447584)
chr1 (63-124)||(44570687-44570748)
chr1 (157-210)||(50472106-50472159)
chr1 (147-203)||(10166875-10166931)
chr1 (146-210)||(35499429-35499492)
chr1 (146-190)||(39887445-39887489)
chr1 (55-143)||(44410312-44410402)
chr1 (86-158)||(5474452-5474526)
chr1 (147-190)||(37447008-37447050)
chr1 (58-124)||(27804269-27804335)
chr1 (164-209)||(32128296-32128340)
chr1 (155-203)||(41481067-41481116)
chr1 (55-124)||(43622981-43623050)
chr1 (55-124)||(47165215-47165284)
chr1 (57-118)||(51847855-51847916)
chr1 (146-190)||(8225150-8225194)
chr1 (55-83)||(45565506-45565534)
chr1 (56-124)||(50005168-50005236)
[»] chr5 (51 HSPs)
chr5 (152-203)||(1209051-1209102)
chr5 (55-149)||(20523195-20523291)
chr5 (146-210)||(33995550-33995614)
chr5 (155-210)||(17541990-17542045)
chr5 (152-210)||(13391055-13391113)
chr5 (55-124)||(15373961-15374030)
chr5 (146-210)||(22304840-22304905)
chr5 (152-203)||(12480285-12480336)
chr5 (55-121)||(40809342-40809408)
chr5 (146-200)||(41761861-41761915)
chr5 (146-203)||(927680-927737)
chr5 (55-149)||(15374022-15374118)
chr5 (56-124)||(2721560-2721628)
chr5 (152-203)||(14835176-14835227)
chr5 (152-210)||(28489847-28489905)
chr5 (160-210)||(33146474-33146524)
chr5 (55-124)||(2316468-2316536)
chr5 (55-124)||(9764427-9764496)
chr5 (152-209)||(17492796-17492853)
chr5 (55-124)||(20523134-20523203)
chr5 (55-124)||(22303870-22303939)
chr5 (55-124)||(22766953-22767022)
chr5 (56-124)||(19533907-19533975)
chr5 (152-199)||(22302858-22302905)
chr5 (55-118)||(23092057-23092120)
chr5 (55-149)||(2316379-2316476)
chr5 (55-121)||(15804323-15804389)
chr5 (55-124)||(3563278-3563347)
chr5 (55-149)||(9764339-9764435)
chr5 (55-124)||(16515107-16515176)
chr5 (55-124)||(25935290-25935359)
chr5 (55-124)||(26281269-26281338)
chr5 (55-124)||(32390061-32390130)
chr5 (55-124)||(37722894-37722963)
chr5 (55-124)||(40090414-40090483)
chr5 (156-204)||(6955125-6955173)
chr5 (146-210)||(8255341-8255405)
chr5 (147-203)||(15270530-15270585)
chr5 (146-190)||(22303515-22303559)
chr5 (56-149)||(32389974-32390069)
chr5 (55-123)||(32470883-32470951)
chr5 (147-209)||(9893802-9893867)
chr5 (55-118)||(33245378-33245441)
chr5 (155-190)||(37241289-37241324)
chr5 (55-114)||(40643916-40643975)
chr5 (58-124)||(16515009-16515074)
chr5 (153-203)||(31368238-31368288)
chr5 (147-200)||(32249766-32249818)
chr5 (146-210)||(34105413-34105476)
chr5 (152-200)||(38178951-38178999)
chr5 (152-200)||(38206175-38206223)
[»] chr3 (65 HSPs)
chr3 (73-155)||(31070425-31070509)
chr3 (146-210)||(24241817-24241881)
chr3 (152-210)||(55460651-55460709)
chr3 (153-210)||(6836666-6836723)
chr3 (55-124)||(44692911-44692980)
chr3 (147-208)||(46707004-46707065)
chr3 (147-203)||(36397624-36397680)
chr3 (152-203)||(28092050-28092101)
chr3 (146-210)||(7976929-7976994)
chr3 (55-149)||(44436259-44436355)
chr3 (55-124)||(46672805-46672874)
chr3 (147-203)||(34396257-34396313)
chr3 (147-203)||(35279583-35279639)
chr3 (147-203)||(43863598-43863654)
chr3 (152-199)||(53470068-53470115)
chr3 (92-155)||(46429434-46429499)
chr3 (146-203)||(671301-671358)
chr3 (55-149)||(9129345-9129441)
chr3 (55-124)||(9129433-9129502)
chr3 (55-149)||(9137452-9137548)
chr3 (55-124)||(9137540-9137609)
chr3 (55-124)||(27251983-27252052)
chr3 (161-210)||(31189025-31189074)
chr3 (146-199)||(38506601-38506654)
chr3 (55-149)||(44692823-44692919)
chr3 (55-124)||(47767433-47767502)
chr3 (147-210)||(7302773-7302836)
chr3 (152-190)||(13176305-13176343)
chr3 (152-190)||(13339205-13339243)
chr3 (146-200)||(37054774-37054827)
chr3 (146-200)||(42005591-42005644)
chr3 (146-200)||(48947959-48948013)
chr3 (55-124)||(7302347-7302416)
chr3 (146-203)||(21731298-21731355)
chr3 (154-210)||(34936550-34936607)
chr3 (55-124)||(37054395-37054464)
chr3 (55-124)||(42005955-42006024)
chr3 (55-124)||(48947606-48947675)
chr3 (55-124)||(49457344-49457413)
chr3 (147-200)||(53129543-53129595)
chr3 (146-190)||(31022051-31022095)
chr3 (147-195)||(46636203-46636251)
chr3 (146-209)||(44288131-44288194)
chr3 (152-203)||(47337502-47337553)
chr3 (62-124)||(19475824-19475886)
chr3 (58-124)||(21307534-21307600)
chr3 (154-192)||(34088959-34088997)
chr3 (55-121)||(39110395-39110461)
chr3 (60-118)||(44288467-44288525)
chr3 (96-155)||(47284268-47284329)
chr3 (57-123)||(52527039-52527105)
chr3 (161-210)||(2732951-2733000)
chr3 (55-124)||(5415784-5415853)
chr3 (55-124)||(5415872-5415941)
chr3 (55-124)||(34088572-34088641)
chr3 (55-124)||(36397991-36398060)
chr3 (105-155)||(39215889-39215941)
chr3 (157-210)||(47767816-47767869)
chr3 (147-196)||(50168307-50168356)
chr3 (173-210)||(52527416-52527453)
chr3 (55-83)||(332087-332115)
chr3 (146-210)||(645841-645904)
chr3 (72-124)||(7976566-7976618)
chr3 (146-198)||(36636203-36636255)
chr3 (146-190)||(47283926-47283970)
[»] scaffold0129 (1 HSPs)
scaffold0129 (146-210)||(19413-19477)
[»] chr6 (22 HSPs)
chr6 (56-155)||(9763014-9763115)
chr6 (55-149)||(9285648-9285744)
chr6 (56-124)||(6919710-6919778)
chr6 (58-124)||(15299514-15299579)
chr6 (146-203)||(8475508-8475565)
chr6 (55-124)||(28918166-28918235)
chr6 (55-120)||(29889441-29889506)
chr6 (55-120)||(34244987-34245052)
chr6 (152-200)||(1368859-1368907)
chr6 (155-203)||(31413248-31413296)
chr6 (55-139)||(776152-776238)
chr6 (147-210)||(28918537-28918600)
chr6 (55-118)||(776081-776144)
chr6 (55-118)||(8574696-8574759)
chr6 (55-118)||(8574760-8574823)
chr6 (157-203)||(10105396-10105442)
chr6 (152-190)||(15832992-15833030)
chr6 (55-124)||(1368478-1368547)
chr6 (55-149)||(6919770-6919865)
chr6 (67-124)||(15299412-15299469)
chr6 (146-202)||(1195700-1195755)
chr6 (158-210)||(15616026-15616077)
[»] scaffold0400 (2 HSPs)
scaffold0400 (152-210)||(4126-4184)
scaffold0400 (55-124)||(4501-4570)
[»] scaffold0365 (2 HSPs)
scaffold0365 (152-210)||(4770-4828)
scaffold0365 (55-124)||(5145-5214)
[»] scaffold0009 (1 HSPs)
scaffold0009 (55-124)||(41998-42067)
[»] scaffold1562 (2 HSPs)
scaffold1562 (56-124)||(494-562)
scaffold1562 (55-117)||(406-468)
[»] scaffold1158 (2 HSPs)
scaffold1158 (56-124)||(2031-2099)
scaffold1158 (55-117)||(2125-2187)
[»] scaffold0318 (1 HSPs)
scaffold0318 (154-203)||(3244-3293)
[»] scaffold0301 (1 HSPs)
scaffold0301 (146-203)||(7531-7588)
[»] scaffold0169 (2 HSPs)
scaffold0169 (55-124)||(4076-4145)
scaffold0169 (162-210)||(4414-4462)
[»] scaffold0048 (1 HSPs)
scaffold0048 (56-124)||(82945-83013)
[»] scaffold0014 (1 HSPs)
scaffold0014 (153-203)||(223419-223468)
[»] scaffold0002 (1 HSPs)
scaffold0002 (152-190)||(130645-130683)
[»] scaffold0027 (1 HSPs)
scaffold0027 (55-120)||(10887-10952)
[»] scaffold0047 (1 HSPs)
scaffold0047 (152-190)||(49962-50000)


Alignment Details
Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 29065820 - 29065922
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  29065820 gagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaata 29065919  T
Q  153 att 155  Q
    |||    
T  29065920 att 29065922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 5644678 - 5644780
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||| ||||| |||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| ||||||| |||||||||||||    
T  5644678 gagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaata 5644777  T
Q  153 att 155  Q
    |||    
T  5644778 att 5644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 30080478 - 30080414
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  30080478 caaaaaaattaaaatttataaaagtttcccaaaaatgataacaatgaaattttttattactccat 30080414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 37460634 - 37460583
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37460634 aattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttatt 37460583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 21636038 - 21635941
Alignment:
Q  60 tgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||||   ||||||||||  |||| ||||||||||||| |||| |||||||||||| ||  |||||| ||||||||||||||||||||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataatt 21635941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 19865727 - 19865670
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19865727 caaaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaaattttttatt 19865670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 35456184 - 35456248
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||    
T  35456184 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatatttttattactccat 35456248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 30629438 - 30629492
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  30629438 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 30629492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 2057396 - 2057465
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  2057396 gagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtg 2057465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 2411691 - 2411748
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  2411691 caaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttatt 2411748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 9784624 - 9784567
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  9784624 caaaaaaattaaaatttataaaagttgcccaaaaattatgacaatgaatttttttatt 9784567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 40496098 - 40496155
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  40496098 caaaaaaattaaaatttataaaagttctccaaaaatgatgacaatgaatttttttatt 40496155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 14602941 - 14602877
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| ||||||||||||||| |||||  |||||||| ||||||    
T  14602941 caaaaaaattaaaatttataaaagttgcccaaaaatgatgactatgaatatttttattactccat 14602877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 22391272 - 22391208
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| ||||||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  22391272 caaaaaaattaaagtttataaaagttgttcaaaaatgatggcaatgaaattttttatttctccat 22391208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 28538846 - 28538790
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  28538846 aaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttatt 28538790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 46069423 - 46069494
Alignment:
Q  86 gaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||| ||||||||||| | ||||||||||||||||||||  |||||| ||||||||||| ||||||||||||    
T  46069423 gaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataatt 46069494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 14790467 - 14790524
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||    
T  14790467 aattaaaatttataaaagttgcccaaaaatgatggcaatg-aattttttttttctccat 14790524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 40110738 - 40110835
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcg-tttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||||||| |||||  |||||| | ||||||| |||||||||    
T  40110738 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaa 40110835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 6498823 - 6498758
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | ||||||| ||||||||    
T  6498823 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 6498758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 18789304 - 18789235
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||| |||||| ||||||||||||| ||| | ||||||| |||||| |||||    
T  18789304 gagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtg 18789235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 40667717 - 40667774
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||| ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  40667717 caaaaaaatttaaattaataaaagttgcccaaaaatgatgacaatgaatttttttatt 40667774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 44915196 - 44915265
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  ||||| ||||||  |||  ||||||||||||| ||||||||||||||||||||    
T  44915196 gagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtg 44915265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 42816903 - 42816959
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||| |||| ||||    
T  42816903 aaaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaatttttgtatt 42816959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 43955671 - 43955603
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||||||| |||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtg 43955603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 43955518 - 43955581
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||    
T  43955518 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactacttt 43955581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 36328492 - 36328434
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||| ||| ||||||    
T  36328492 aattaaaatttataaaagttgtccaaaaatgatggtaatgaaatttttaattactccat 36328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 39342330 - 39342277
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  39342330 caaaaaaattaaaatttataaaagttgcccaaaaat-atgacaatgaattttttt 39342277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 9784989 - 9784920
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| | ||||||| ||||||| ||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtg 9784920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 23548669 - 23548600
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| | ||||||| ||||||| ||||    
T  23548669 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtg 23548600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 26162195 - 26162126
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  26162195 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 26162126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 31632723 - 31632792
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  31632723 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 31632792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 34399007 - 34398938
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaag-caattcaactactttgaggt 123  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| |  |||||||||||||||||||    
T  34399007 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgaggt 34398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 40110896 - 40110827
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||   ||||||| ||  |||| ||||||||||| | ||||||||||||||||||||    
T  40110896 gagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtg 40110827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 30524256 - 30524320
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttg 119  Q
    |||||||| ||||||||  ||||||||||| |||| ||||||||||| | ||||||| |||||||    
T  30524256 gagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttg 30524320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 41442768 - 41442720
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||| ||||||||||||||||||||| |||||||||||| | |||||||    
T  41442768 aattgaaatttataaaagttacccaataatgatgacaataatatttttt 41442720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 43791403 - 43791451
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaa 194  Q
    ||||| ||||||||| |||||||||| || |||||||||||||||||||    
T  43791403 caaaaaaattaaaatatataaaagttgccaaaaaatgatgacaatgaaa 43791451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 45967296 - 45967336
Alignment:
Q  158 aatttataaaagttacccaaaaatgatgacaatgaaatttt 198  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  45967296 aatttataaaagtttcccaaaaataatgacaatgaaatttt 45967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 25188953 - 25188910
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaatttt 198  Q
    ||||||||| ||||||| || |||||||||||||||||||||||    
T  25188953 taaaatttacaaaagttgccaaaaaatgatgacaatgaaatttt 25188910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 26416312 - 26416357
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  26416312 aaatttataaaagttgcccaaaaat-atgaaaatgaaattttttatt 26416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 28539235 - 28539157
Alignment:
Q  46 aaactctgggagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||  ||||||||||||||||  |||||||||||  |||| || |||||||| | ||||||| ||||||| ||||    
T  28539235 aaactcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtg 28539157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 35777022 - 35776944
Alignment:
Q  46 aaactctgggagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||  |||||||||||||||   |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  35777022 aaactctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 35776944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 46700543 - 46700597
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||  || ||||| ||||||| |||||||||||    
T  46700543 caaaaaaattaaaatttataaaagtccccgaaaaacgatgacattgaaatttttt 46700597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 29065977 - 29065908
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| ||||||||| |   ||| ||||||||||| | ||||||| || |||||||||    
T  29065977 gagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtg 29065908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 34388423 - 34388354
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||| |||   |||||||||||  |||| |||| |||||| | ||||||||||||||||||||    
T  34388423 gagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtg 34388354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 40495579 - 40495622
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  40495579 caaaaaaattaaaatttataaaagttgcccaaaaat-atgacaat 40495622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 3853617 - 3853719
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  3853617 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaata 3853716  T
Q  153 att 155  Q
    |||    
T  3853717 att 3853719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 3858075 - 3858177
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  3858075 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaata 3858174  T
Q  153 att 155  Q
    |||    
T  3858175 att 3858177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 9983034 - 9983091
Alignment:
Q  153 attaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  9983034 attaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttatttttccat 9983091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 40733804 - 40733748
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  40733804 aaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 40733748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 44346390 - 44346334
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44346390 aaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 44346334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 33377001 - 33376947
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  33377001 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 33376947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 40046805 - 40046871
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | |||||||||||||||||    
T  40046805 gagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 40046871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 13404967 - 13404883
Alignment:
Q  73 gaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||||  |||| ||||||||||| | ||||||||||||||||| ||  || ||| ||||||||||||||||||||||||    
T  13404967 gaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataatt 13404883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 17111027 - 17110931
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    |||||||||||||||||  ||||||||||  |||| ||||||||||| | |||||||||||||| |||||  |||||| |||||||| || ||||||    
T  17111027 gagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaa 17110931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 43185359 - 43185416
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  43185359 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttctttatt 43185416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 44889355 - 44889420
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||| | ||||||| ||||||||    
T  44889355 gagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttga 44889420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 7079686 - 7079734
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  7079686 taaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 7079734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 33902668 - 33902732
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttg 119  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | |||||||||||||||    
T  33902668 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg 33902732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 29611711 - 29611762
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  29611711 aattaaaatttatgaaagttgcccaaaaatgatgacaatgaatttttttatt 29611762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 28324744 - 28324678
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||||| ||||||| ||| |||||    
T  28324744 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgag 28324678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 34009082 - 34009132
Alignment:
Q  160 tttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  34009082 tttataaaagttgcccaaaaatgatggcaatgaaattctttatttctccat 34009132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 4156324 - 4156228
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaa 150  Q
    ||||||||||||||| ||||| ||||||  |||| ||||||||||| | |||||||||||||| || ||  |||||| |||||||| || |||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaactactttaagatgaattctattgtttgaattcaactcaaaa 4156228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 6416524 - 6416569
Alignment:
Q  165 aaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6416524 aaaagttgcccaaaaatgatgacaatgaaattttttattactccat 6416569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 29257073 - 29257026
Alignment:
Q  156 aaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||    
T  29257073 aaaatttataaaagttgcccaaaaatgatgacaatgaatatttttatt 29257026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 8689138 - 8689196
Alignment:
Q  60 tgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||  ||||||||||| |||| ||||||||||| | ||||||||||||||    
T  8689138 tgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattcaactacttt 8689196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 10593452 - 10593505
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||| ||||||    
T  10593452 caaaataattaaa-tttataaaatttgcccaaaaatgatgacaatgaattttttt 10593505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 17110870 - 17110936
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||   ||||||||||  |||| ||||||||||| | |||||||||||||||||    
T  17110870 gagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 17110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 26520146 - 26520088
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||| |||||||||  ||| | |||||||||||||| ||||||    
T  26520146 aattaaaatttataaaagttgcccaaaaatattgatagtgaaattttttattactccat 26520088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 31980212 - 31980163
Alignment:
Q  153 attaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  31980212 attaaaatttataaa-gttgcccaaaaatgatgacaatgaatttttttatt 31980163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 42711438 - 42711372
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    |||||||||||||| |  |||||||||||  |||| ||||||||||| | |||||||||||||||||    
T  42711438 gagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 42711372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 515614 - 515549
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||| | | | ||||| ||||||||    
T  515614 gagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttga 515549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 8049556 - 8049609
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||||||||||||||| ||| |||  ||||||||||||||| |||||||||||    
T  8049556 aaaataattaaaatttacaaaggttgtccaaaaatgatgacattgaaatttttt 8049609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 13144972 - 13145017
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||    
T  13144972 ttaaaatttataaaagtttctcaaaaatgatgacattgaaattttt 13145017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 23011735 - 23011804
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||| || ||||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  23011735 gagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 23011804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 24044961 - 24045030
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   |||||||||||  |||| ||||||||||||| ||||||| ||| ||||||||    
T  24044961 gagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 24045030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 31976288 - 31976235
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||| ||||||||    
T  31976288 caaaagaattaaaatttataaaagttctccaaaaacgatgacaataaaattttt 31976235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 33377379 - 33377310
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  ||||||| |||||||| | ||||||| ||||||| ||||    
T  33377379 gagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtg 33377310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 35404448 - 35404403
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||    
T  35404448 taaaatttataaaaattgcccaaaaatgatgacaatgaattttttt 35404403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 35978752 - 35978699
Alignment:
Q  156 aaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctcca 209  Q
    ||||||||||||| || |||||||||| ||||| |||||||||||||| |||||    
T  35978752 aaaatttataaaatttccccaaaaatggtgacattgaaattttttattactcca 35978699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 36103102 - 36103167
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||| | | ||||||| ||||||||    
T  36103102 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttga 36103167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 24045342 - 24045386
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  24045342 caaaaaaattgaaatttataaaagttgcccaaaaatgatgacaat 24045386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 24051650 - 24051694
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  24051650 caaaaaaattgaaatttataaaagttgcccaaaaatgatgacaat 24051694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 36624971 - 36624923
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||| || ||||||||||||||| | ||||||||||    
T  36624971 taaaatttataaaagttgcctaaaaatgatgacaataatattttttatt 36624923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 8409390 - 8409347
Alignment:
Q  160 tttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||  |||||||||||||||||||| |||||||||    
T  8409390 tttataaaagttgtccaaaaatgatgacaatgaatttttttatt 8409347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 28190389 - 28190346
Alignment:
Q  158 aatttataaaagttacccaaaaatgatgacaatgaaatttttta 201  Q
    |||||||||||||| |  ||||||||||||||||||||||||||    
T  28190389 aatttataaaagttgcataaaaatgatgacaatgaaatttttta 28190346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 29482504 - 29482458
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  29482504 aattaaaatttataaaagttgcccaaaaat-atgacaatgaatttttt 29482458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 8049273 - 8049323
Alignment:
Q  73 gaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggt 123  Q
    |||||||||||  |||||||||||||||| | ||||||| |||||||||||    
T  8049273 gaatgttttgagggaatataatgttttgagggaattcaaatactttgaggt 8049323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 31976831 - 31976782
Alignment:
Q  153 attaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||||||||    
T  31976831 attaaaatttataaa-gttgctcaaaaatgatgacaatgaatttttttatt 31976782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 42739969 - 42740034
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||| | ||||||||||||||||| ||  || ||| ||| ||||||||||||||||||||    
T  42739969 aatgttttgagggaattcaactactttgagatgaattttattgttagaatccacctcaaaataatt 42740034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 1088016 - 1087963
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||| || ||||||    
T  1088016 aaaaaaattaatatttataaaagttgcccaaaaataatgacaattaattttttt 1087963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 10605902 - 10605947
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatga 192  Q
    ||||||||| |||||||||||||||  |||||||||| ||||||||    
T  10605902 aaaataattgaaatttataaaagttgaccaaaaatgacgacaatga 10605947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 33986005 - 33986074
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||| |||||  ||| |||||||||||   ||||||| ||||||||||||    
T  33986005 gagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtg 33986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 1088359 - 1088303
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaa 111  Q
    |||||||||||| |||| ||||||||||| ||||| || |||||||| | |||||||    
T  1088359 gagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaa 1088303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 14991693 - 14991749
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaa 111  Q
    ||||||||||||||||  |||||||||||   ||| ||||||||||| |||||||||    
T  14991693 gagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaa 14991749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 27322731 - 27322687
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgtttt 99  Q
    |||||||||||||||| ||||||||||||  |||| |||||||||    
T  27322731 gagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 27033491 - 27033593
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||||||||  ||||||||||| ||||| ||||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||||||| |    
T  27033491 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaaga 27033590  T
Q  153 att 155  Q
    |||    
T  27033591 att 27033593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 41461682 - 41461568
Alignment:
Q  46 aaactctgggagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccac 143  Q
    |||||||  ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||| |||||||||  |||||| ||||||||||||    
T  41461682 aaactcttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccac 41461583  T
Q  144 ctcaaaataattaaa 158  Q
    |||||||||||||||    
T  41461582 ctcaaaataattaaa 41461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 8736135 - 8736071
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8736135 caaaaaaattaaaatttataaaagttgcccaaaaatgatggcaatgaaattttttatttctccat 8736071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 11716409 - 11716478
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  11716409 gagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 11716478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 2925030 - 2925094
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  2925030 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaatttttgattactccat 2925094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 1583502 - 1583445
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1583502 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 1583445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 11141684 - 11141741
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11141684 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 11141741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 44256013 - 44256070
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44256013 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 44256070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 769410 - 769464
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  769410 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 769464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 784794 - 784860
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    |||||||||||||||||| ||||||||||  |||| ||||||||||||| |||| ||||||||||||    
T  784794 gagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgag 784860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 13018130 - 13018188
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  13018130 aattaaaacttataaaagttgcccaaaaatgatgacaatgaatttttttattactccat 13018188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 14306528 - 14306470
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||    
T  14306528 aattaaaatttataaaagttgtccaaaaatgatgacagtgaaattttttattactccat 14306470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 33188960 - 33188906
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  33188960 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 33188906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 14365701 - 14365770
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  14365701 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 14365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 14537200 - 14537269
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  14537200 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtg 14537269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 14365857 - 14365793
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttg 119  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | |||||||||||||||    
T  14365857 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg 14365793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 39630606 - 39630662
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  39630606 aaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttatt 39630662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 784951 - 784846
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||||||||  |||| ||||||  |||| ||||||||||| | |||||||||||||| |||||  |||||| |||||||| || |||||| ||    
T  784951 gagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagta 784852  T
Q  153 attaaa 158  Q
     |||||    
T  784851 gttaaa 784846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 7167359 - 7167305
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  7167359 caaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataaaatttttt 7167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 7309606 - 7309549
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  7309606 caaaaaaattaaaatttataaaagttgcacaaaaatgatgacaatgaatatttttatt 7309549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 28021876 - 28021819
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||  |||||||  |||||||||||||||||||||    
T  28021876 caaaaaaattaaaatttataaaagttgtccaaaaaaaatgacaatgaaattttttatt 28021819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 35047371 - 35047314
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||  | |||||||||||||||||| |||||||||    
T  35047371 caaaaaaattaaaatttataaaagttggcaaaaaatgatgacaatgaatttttttatt 35047314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 44205361 - 44205304
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||  |||||||| || ||||||||||||||||||    
T  44205361 caaaaaaattaaaatttataaaagttgtccaaaaataataacaatgaaattttttatt 44205304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 19231186 - 19231126
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttct 206  Q
    ||||| || ||| ||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  19231186 caaaaaaaataatatttataaaagttgcccaaaaattacgacaatgaaattttttatttct 19231126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 21504830 - 21504893
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| ||||||||| |||| |||||||||||||| | ||||||    
T  21504830 caaaaaaattaaaatttataaaagttgcccaaaaat-atgataatgaaattttttactactccat 21504893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 41585358 - 41585307
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||||||| ||||||||| || |||||||| |||||||||    
T  41585358 aattaaaatttataaaagttgcccaaaaattataacaatgaatttttttatt 41585307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 3092624 - 3092678
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||| || ||||||    
T  3092624 caaaaaaattaaaatttataaaagttgcccaaaaataatgacaattaattttttt 3092678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 17906029 - 17906074
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  17906029 taaaacttataaaagttgcccaaaaatgatgacaatgaattttttt 17906074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 7228084 - 7228016
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggt 123  Q
    ||||||||||||||||   |||||||||| ||||| ||||||||||||| |||| || ||| |||||||    
T  7228084 gagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatttaaataccttgaggt 7228016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 19072259 - 19072306
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  19072259 aattacaatttataaaagtttcccaaaaat-atgacaatgaaatttttt 19072306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 32839348 - 32839304
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||    
T  32839348 taaaatttataaaagttgcccaaaaatgatgataataaaattttt 32839304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 32839877 - 32839842
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32839877 taaaatttataaaagttgcccaaaaatgatgacaat 32839842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 7611585 - 7611547
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  7611585 aattaaaatttataaaagttgcccaaaaattatgacaat 7611547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 8735845 - 8735915
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtgt 125  Q
    |||||||||||||||| |  |||||||||  ||||||||||||  || | ||||||| |||||||||||||    
T  8735845 gagtgtgtttggatgggaacatgttttgagggaatataatgttacgagggaattcaaatactttgaggtgt 8735915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 17180298 - 17180364
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    |||||||||||||||   |||||||||||  |||| ||||||||||| | |||||||||| ||||||    
T  17180298 gagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgag 17180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 30698289 - 30698351
Alignment:
Q  62 tttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||  |||||||||||  |||| ||||||||||||| ||||||| ||| ||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 30698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 10480120 - 10480189
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| |||||||  || | ||||||| ||||||||||||    
T  10480120 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtg 10480189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 17905655 - 17905724
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||| |||||   ||||||||||| ||||| ||||||||| ||| ||||||| || |||||||||    
T  17905655 gagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtg 17905724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 3092283 - 3092347
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttg 119  Q
    |||||| |||||||||| |||||||||||  |||| || |||||||| | ||||||| |||||||    
T  3092283 gagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttg 3092347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 11532324 - 11532256
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||| ||| ||  |||| ||||||||||| | ||||||| ||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtg 11532256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 11793897 - 11793965
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||| ||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 11793965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 14537320 - 14537261
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    |||||||||| | |||||||||||||| |||||  |||||| |||||||| |||||||||    
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 14537261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 10128132 - 10128030
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    |||||| |||||||||  ||||||||||| ||||| ||||||||||| | ||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  10128132 gagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaata 10128033  T
Q  153 att 155  Q
    |||    
T  10128032 att 10128030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 15660341 - 15660239
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    |||||||||||||||   |||||||||||  |||| ||||||||||| | ||||||||||||||||| ||  |||||| ||||||||||| |||||||||    
T  15660341 gagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaata 15660242  T
Q  153 att 155  Q
    |||    
T  15660241 att 15660239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 42844544 - 42844646
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    |||||||| | |||||  |||||||||||  |||| |||| |||||||| ||||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  42844544 gagtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaaata 42844643  T
Q  153 att 155  Q
    |||    
T  42844644 att 42844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 52294767 - 52294705
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctcca 209  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  52294767 aaaaaaattaaaatttataaaagttccccaaaaatgatgacattgaaattttttattactcca 52294705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 2126216 - 2126273
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  2126216 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 2126273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 36455908 - 36456004
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||||||| |||||  |||||| |||||||| |||||||||    
T  36455908 gagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 36456004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 31947951 - 31948014
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctcca 209  Q
    ||||| |||||||||||||||||||| ||||||||||||| || |||||||||||||| |||||    
T  31947951 caaaaaaattaaaatttataaaagtttcccaaaaatgatgccattgaaattttttattactcca 31948014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 17727800 - 17727846
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17727800 aaatttataaaagttgcccaaaaatgatgacaatgaaattttttatt 17727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 41139850 - 41139907
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  41139850 caaaaaaaataaaatttataaaagttgcccaaaaatgatgacaatgaaattttgtatt 41139907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 16299938 - 16299890
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  16299938 taaaatttataaaagttgtccaaaaatgatgacaatgaaattttttatt 16299890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 4490404 - 4490461
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  4490404 aattaaaatttataaaagttgcccaaaaatgatgccaatg-aattttttattactccat 4490461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 26251030 - 26250965
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||| | ||||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataatt 26250965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 28846029 - 28845963
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||   ||||||||||  |||||||||||||||| | |||||||||||||||||    
T  28846029 gagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgag 28845963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 14982281 - 14982350
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | |||| ||||||||| |||||    
T  14982281 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatttaactactttaaggtg 14982350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 28845876 - 28845968
Alignment:
Q  59 gtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||| |||||||||||  |||| |||||||| || | |||||||||||||| |||||  |||||| |||||||| || ||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaa 28845968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 36456084 - 36456015
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||  |||| |||| |||||| | |||||||||||||| |||||    
T  36456084 gagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaactactttaaggtg 36456015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 41498648 - 41498579
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||| ||||||  |||| ||||||||||||| ||||||| || |||||||||    
T  41498648 gagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtg 41498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 49111470 - 49111401
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||| |||||||||    
T  49111470 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtg 49111401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 55266933 - 55266864
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||   |||||||| |||||| | |||||||||||||| |||||    
T  55266933 gagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaactactttaaggtg 55266864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 41498490 - 41498593
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatg-ttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaat 151  Q
    ||||||||||||||||  || |||||||| |||| |||||| |||||| | |||||||| ||||| |||||  |||||| |||| ||| |||||||||||    
T  41498490 gagtgtgtttggatgggggattgttttgagagaaaataatgtttttgagggaattcaaccactttaaggtgaattctattgtttaaattcacctcaaaat 41498589  T
Q  152 aatt 155  Q
    ||||    
T  41498590 aatt 41498593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 42776471 - 42776527
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||| || || ||||||||||| | ||||||||||||||||||||||||    
T  42776471 ttaaaatttatataatttgcccaaaaatgacggcaatgaaattttttatttctccat 42776527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 47108606 - 47108662
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||| || ||||||||| |||| |||||||||||||||| ||||||    
T  47108606 ttaaaatttataaaaattgcccaaaaattatgataatgaaattttttattactccat 47108662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 46242791 - 46242739
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  46242791 caaaaaaattaaaatttataaaagttccc--aaaatgatgacaatgaaatttttt 46242739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 857397 - 857331
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||   ||||||||||  |||| ||||||||||| | |||||||||||||||||    
T  857397 gagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 857331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 1539649 - 1539711
Alignment:
Q  62 tttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||| |||||||||||  |||| ||||||||||| | ||||||| ||||||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 1539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 7352814 - 7352899
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaat 139  Q
    |||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||| ||| |||||  |||||| ||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaat 7352899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 35470501 - 35470547
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatga 192  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  35470501 caaaaaaataaaaatttataaaagttgcccaaaaatgatgacaatga 35470547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 1107210 - 1107114
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    |||||| |||||||||  |||| ||||||  |||||||||||||||| | |||||||||||| | |||||  |||||| |||||||| || ||||||    
T  1107210 gagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaa 1107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 1112606 - 1112675
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||   ||| |||||||| || | ||||||||||||||||||||    
T  1112606 gagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtg 1112675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 7352970 - 7352905
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||   ||||||||||  |||| ||||||||||| | ||||||||||||||||    
T  7352970 gagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttga 7352905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 16516172 - 16516237
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||||| |||| || ||||||||    
T  16516172 gagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttga 16516237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 21782352 - 21782408
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||| ||||||||||||||| || |||||| |||||||||||||||||||||    
T  21782352 caaaaaaatttaaatttataaaagttgcc-aaaaattatgacaatgaaattttttatt 21782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 27284382 - 27284333
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||||  | |||||||||||||||||| |||||||||    
T  27284382 ttaaaatttataaaagttgtcgaaaaatgatgacaatgaatttttttatt 27284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 31473850 - 31473919
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  31473850 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 31473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 54566552 - 54566609
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| || ||||||||||||||||| |||||||||||||||||| |  |||||||||    
T  54566552 caaaaaaaataaaatttataaaagttgcccaaaaatgatgacaataattttttttatt 54566609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 4896789 - 4896721
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   ||| ||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtg 4896721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 10127976 - 10128044
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||| |||||||  ||| ||||||||||||| ||||||| || |||||||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtg 10128044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 17727436 - 17727480
Alignment:
Q  158 aatttataaaagttacccaaaaatgatgacaatgaaattttttat 202  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||    
T  17727436 aatttataaaatttgcccaaaaatgatgacaatgaaatattttat 17727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 10633035 - 10633102
Alignment:
Q  57 gtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||  |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 10633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 24705716 - 24705751
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||||||||||||||| ||||||||||||||||||    
T  24705716 taaaatttataaaagttgcccaaaaatgatgacaat 24705751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 13088476 - 13088430
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttt 198  Q
    |||||||| ||||||||| | ||||||| ||||||||||||||||||    
T  13088476 aattaaaaattataaaagattcccaaaattgatgacaatgaaatttt 13088430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 31742922 - 31742876
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttga 101  Q
    ||||||||||||||||| |||||||||||  |||| |||||||||||    
T  31742922 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 31742876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 40547939 - 40547893
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatga 192  Q
    ||||| |||||||||||||||||||| || |||||||||||| ||||    
T  40547939 caaaaaaattaaaatttataaaagttgccaaaaaatgatgacgatga 40547893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 56118328 - 56118286
Alignment:
Q  158 aatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||    
T  56118328 aatttataaaagttatccaaaattgatgacaatgaattttttt 56118286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 467959 - 467896
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||| |||||||||| || |||||||| |||||||    
T  467959 gagtgtgtttggatgga-gaatgttttgatggaatgtaatgttttg-aggaattcaaccactttga 467896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 4441338 - 4441395
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaac 112  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaac 4441395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 5715745 - 5715810
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    |||||||||||||||   ||||||||||| | ||| ||||||||||| | ||||||| ||||||||    
T  5715745 gagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttga 5715810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 11040969 - 11041037
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||| ||||||  |||| |||||||||||   ||||||||||||||||||||    
T  11040969 gagtgtgtttggatggg-gaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtg 11041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 28751906 - 28751857
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||||  ||||||||||||| |||| | |||||||||    
T  28751906 ttaaaatttataaaagttgtccaaaaatgatgaaaatggatttttttatt 28751857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 9449580 - 9449516
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| ||||| ||||||| |||| | ||||||| ||||||||||||| ||||||| | ||||||    
T  9449580 caaaaaaattataatttatgaaaggtgcccaaaagtgatgacaatgaatttttttactactccat 9449516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 11348395 - 11348327
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggt 123  Q
    |||||| |||||||||  ||||||||| |  |||| ||||||||||| | |||||||| ||||||||||    
T  11348395 gagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaacaactttgaggt 11348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 26534871 - 26534919
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||||||||||||||| || |||||||||||||  |||||| ||||||    
T  26534871 aattaaaatttataaaacttgcccaaaaatgatggtaatgaattttttt 26534919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 42775941 - 42775897
Alignment:
Q  156 aaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||||||||||||||| ||||||||| |||||||| || ||||||    
T  42775941 aaaatttataaaagttgcccaaaaataatgacaattaattttttt 42775897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 46242327 - 46242279
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||| ||||| ||||||||||| ||| ||||| |||||||||    
T  46242327 taaaatttatacaagttgcccaaaaatgacgacgatgaatttttttatt 46242279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 53760483 - 53760439
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||||||||||||||||||| |||||| || ||||||||    
T  53760483 caaaaaaattaaaatttataaaagttgcccaaagattatgacaat 53760439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 34756432 - 34756530
Alignment:
Q  59 gtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    ||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  34756432 gtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataatt 34756530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 38277416 - 38277518
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    |||||||||||||||  ||||| ||||||  |||| ||||||||||||| ||||||||||||||||||||  || ||| |||| ||||||||||||||||    
T  38277416 gagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaata 38277515  T
Q  153 att 155  Q
    |||    
T  38277516 att 38277518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 41822242 - 41822179
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  41822242 aaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattactccat 41822179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 15034660 - 15034756
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | |||||||||||||| |||||  |||||| |||||||| |||||||||    
T  15034660 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 15034756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 44571570 - 44571634
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44571570 caaaaaaattaaaatttacaaaagttgcccaaaaatgatggcaatgaaattttttatttctccat 44571634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 50005080 - 50005182
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    |||||||||||||||   |||| |||||| ||||| |||||||||||   ||||||||| ||||||||||  |||||| |||||||||||||||||||||    
T  50005080 gagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaata 50005179  T
Q  153 att 155  Q
    |||    
T  50005180 att 50005182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 27804423 - 27804324
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaata 152  Q
    ||||||||||||||||| |||||||||||   ||| |||||||| |||| |||||||||||||| || ||  |||||| |||||||| ||||||||||||    
T  27804423 gagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaaata 27804324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 15034817 - 15034748
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  15034817 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 15034748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 23536068 - 23536137
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  23536068 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 23536137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 28632296 - 28632239
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  28632296 caaaaaaattaaaatttattaaagttgcccaaaaatgatgacaatgaatttttttatt 28632239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 32128468 - 32128516
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  32128468 aattaaaatttataaaagttccccaaaaatgatgacattgaaatttttt 32128516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 41577970 - 41577918
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttattt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  41577970 aattaaaatttataaaagttgcccaaaaatgatgacaatgattttttttattt 41577918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 15467650 - 15467599
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  15467650 aattaaaatttataaaagttgctcaaaaatgatgacaatgaatttttttatt 15467599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 45565397 - 45565491
Alignment:
Q  57 gtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||  ||||||||||| ||||| ||||||||||| | |||||||||| ||| |||||  |||||| |||| ||| |||||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaa 45565491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 32572960 - 32573025
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||||||| ||||    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaatt 32573025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 40264068 - 40264133
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||| | ||||||||||||||||| ||  |||||| ||||||||||||||||||||||||    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataatt 40264133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 44571063 - 44571121
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||| ||||||||||||||| |||||||||||||||||| || ||||||||| ||||||    
T  44571063 aattgaaatttataaaagttgcccaaaaatgatgacaataaatttttttattgctccat 44571121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 4038076 - 4038145
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||| |||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  4038076 gagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 4038145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 6470758 - 6470689
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  ||||||||||| ||||| ||||||||||| | ||||||| | ||||||||||    
T  6470758 gagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtg 6470689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 26501151 - 26501086
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | ||||||| ||||||||    
T  26501151 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 26501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 30190294 - 30190225
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||| |||||||||    
T  30190294 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtg 30190225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 32647672 - 32647736
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatt-ttttatttctccat 210  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||| || ||||||| ||||||    
T  32647672 aaaaaaattaaaatttataaaagttgcccaaaaataatgacaatgaatttgttttattactccat 32647736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 946766 - 946813
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||    
T  946766 aattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttt 946813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 34003762 - 34003805
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaa 189  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  34003762 caaaaaaattaaaatttataaaaattacccaaaaatgatgacaa 34003805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 48953931 - 48953982
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||||||    
T  48953931 aattaaaatttctaaaagttgtccaaaaatgatgataatgaaattttttatt 48953982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 6470389 - 6470335
Alignment:
Q  156 aaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||| |||||||||||||||| |||||| || |||| ||||||    
T  6470389 aaaatttataaaagttgcccaaaaatgatgacagtgaaatattgtattactccat 6470335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 27935643 - 27935577
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    |||||||||||||||||  ||| ||||||  |||| ||||||||||| | |||||||||||||||||    
T  27935643 gagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgag 27935577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 37214939 - 37214875
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||| | ||||||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  37214939 aatgttttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataatt 37214875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 41822887 - 41822841
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||    
T  41822887 aaatttataaaagttgcccaaaaatgatgacaataaatttttttatt 41822841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 4038233 - 4038137
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||| ||||||  |||  ||||||||||| | |||||||||||||| |||||  |||||| |||||||  |||||||||    
T  4038233 gagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaa 4038137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 24273292 - 24273223
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  24273292 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 24273223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 32288005 - 32287940
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| ||| |||||||  |||| ||||||||||| | ||||||| ||||||||    
T  32288005 gagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttga 32287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 37447584 - 37447532
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||    
T  37447584 aaatttataaaagttgcccaaaaatgatgccaat-aaattttttattactccat 37447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 44570687 - 44570748
Alignment:
Q  63 ttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||| ||||||||||||  |||| ||||||||||||| ||||||| ||| ||||||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 44570748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 50472106 - 50472159
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||||    
T  50472106 aaatttataaaagttgcccaaaaataacgacaatgatattttttattactccat 50472159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 10166875 - 10166931
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| ||||||||||||||||||||  ||| ||||||||||| |||| |||||||||    
T  10166875 aaaaaaattaaaatttataaaagttctccataaatgatgacagtgaatttttttatt 10166931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 35499429 - 35499492
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||| |||||||||| | || ||||||||||||||||||| ||||||||||| ||||||    
T  35499429 caaaaaaattgaaatttataacaattgcccaaaaatgatgacaatg-aattttttattactccat 35499492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 39887445 - 39887489
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  39887445 caaaaaaattaaaatttataaaagttgcccaaaaattatgacaat 39887489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 44410312 - 44410402
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagc-aattcaactactttgaggtg--ttctatcgtttgaatccac 143  Q
    |||||| ||||||||| ||||||||||||  |||| ||||||||| |||| |||||||||| |||||||||  |||||| || |||||||||    
T  44410312 gagtgtatttggatgggagaatgttttgagggaatgtaatgtttt-aagcgaattcaactattttgaggtgaattctattgtctgaatccac 44410402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 5474526 - 5474452
Alignment:
Q  86 gaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataattaaa 158  Q
    |||| ||||||||||| | |||||||||||||| |||||  |||||| |||||||| ||| ||||| ||||||||    
T  5474526 gaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacttcaaagtaattaaa 5474452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 37447050 - 37447008
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||| |||||||||||||||||||||||||||||| ||||||||    
T  37447050 aaaaaaattaaaatttataaaagttacccaaaaat-atgacaat 37447008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 27804269 - 27804335
Alignment:
Q  58 tgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||  |||||||||||  |||| |||| |||||| | |||||||||| |||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtg 27804335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 32128296 - 32128340
Alignment:
Q  164 taaaagttacccaaaaatgatgacaatgaaattttttatttctcca 209  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||    
T  32128296 taaaagtt-cccaaaaatgatgacattgaaattttttattactcca 32128340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 41481116 - 41481067
Alignment:
Q  155 taaaatttataaaagttacccaaaaa-tgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  41481116 taaaatttataaaagttgctaaaaaaatgatgacaatgaaattttttatt 41481067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 43623050 - 43622981
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| |||||||||||   |||| || ||||||||||||    
T  43623050 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtg 43622981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 47165284 - 47165215
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||||  ||||||||||   ||| ||||||||||| | ||||||| |||||| |||||    
T  47165284 gagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtg 47165215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 51847855 - 51847916
Alignment:
Q  57 gtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||||| |||||||||||   ||| ||||||||| ||| ||||||| ||||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatacttt 51847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 8225150 - 8225194
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  8225150 caaaaaaattaaaatttagaaaagttgcccaaaaattatgacaat 8225194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 83
Target Start/End: Complemental strand, 45565534 - 45565506
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttga 83  Q
    |||||||||||||||||||||||||||||    
T  45565534 gagtgtgtttggatggaagaatgttttga 45565506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 50005236 - 50005168
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||| |||| ||||||   ||| ||||||||||| | ||||||| || |||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtg 50005168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 1209051 - 1209102
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1209051 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 1209102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 20523291 - 20523195
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  ||||||||||| ||||| ||||||||||| | |||||||||||||| |||||  |||||| |||||||| |||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 20523195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 33995614 - 33995550
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  33995614 caaaaaaattaaaatttacaaaatttacccaaaaatgatgacaatgaaattttttattactccat 33995550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 17542045 - 17541990
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  17542045 taaaatttataaaagttgcccaaaaatgatggcaatgaaattttttatttctccat 17541990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 13391113 - 13391055
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  13391113 aattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttagtactccat 13391055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 15373961 - 15374030
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  15373961 gagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 15374030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 22304905 - 22304840
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatt-ttttatttctccat 210  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  22304905 caaaaaaattaaaatttataaaagttgcccaaaaatgatggcaatgaaatttttttatttctccat 22304840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 12480285 - 12480336
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  12480285 aattaaaatttataaaagttgcccaaaaatgatgataatgaaattttttatt 12480336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 40809342 - 40809408
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||   |||||||||| ||||||||||||||||| | |||||||||||||||||    
T  40809342 gagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgag 40809408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 41761915 - 41761861
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  41761915 caaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttt 41761861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 927680 - 927737
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  927680 caaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttatt 927737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 15374118 - 15374022
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||||| | |||||  |||||| |||||||| |||||||||    
T  15374118 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaa 15374022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 2721628 - 2721560
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 2721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 14835176 - 14835227
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  14835176 aattaaaatttacaaaagttgcccaaaaatgatgacaatgaaattttatatt 14835227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 28489847 - 28489905
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||||| || || |||||||||| | ||||||||||||||||||||||    
T  28489847 aattaaaatttataaaaattgcctaaaaatgatggcgatgaaattttttatttctccat 28489905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 33146474 - 33146524
Alignment:
Q  160 tttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  33146474 tttataaaagttgcccaaaaatgatggcaatgaaattctttatttctccat 33146524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 2316536 - 2316468
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||||| ||||||||||  |||| |||||||||||   ||||||||||||||||||||    
T  2316536 gagtgtgtttggatggaa-aatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtg 2316468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 9764496 - 9764427
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||| ||  |||| ||||||||||| | ||||||||||||||||||||    
T  9764496 gagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtg 9764427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 17492853 - 17492796
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctcca 209  Q
    ||||||||||||| ||||||  ||||||||||| |||||||||||||||||| |||||    
T  17492853 aattaaaatttattaaagttgtccaaaaatgataacaatgaaattttttattactcca 17492796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 20523134 - 20523203
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||| ||||||||||||  |||| |||| || ||| | ||||||||||||||||||||    
T  20523134 gagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtg 20523203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 22303939 - 22303870
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||||| ||||||| ||| ||||||||    
T  22303939 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 22303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 22766953 - 22767022
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||| | ||||||| |||||| |||||    
T  22766953 gagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtg 22767022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 19533975 - 19533907
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||| |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 19533907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 22302858 - 22302905
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||    
T  22302858 aattaaaatttataaaagttgcccaaaaatgatggtaatgaaattttt 22302905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 23092120 - 23092057
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||||||  |||||||||||| |||| ||||||||||| | | ||||||||||||    
T  23092120 gagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactacttt 23092057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 2316379 - 2316476
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt-gaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||| |||| |||||| | ||||||||||||||  |||||  |||||| |||||||| |||||||||    
T  2316379 gagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaa 2316476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 15804323 - 15804389
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||||  |||||||||||  |||| || |||||||| | |||||||||||||||||    
T  15804323 gagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgag 15804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 3563278 - 3563347
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||| |  |||||||||||  |||| ||||||||||| | |||||||||||||| |||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtg 3563347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 9764339 - 9764435
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||| ||||||  |||  ||||||||||| | |||||||||||||| |||||  |||||| |||||||  |||||||||    
T  9764339 gagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaa 9764435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 16515176 - 16515107
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||||||||| |  |||| ||||||||||| | ||||||||| ||||||||||    
T  16515176 gagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtg 16515107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 25935359 - 25935290
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  25935359 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtg 25935290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 26281338 - 26281269
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  ||| |||||||  |||| ||||||||||| | |||||||||||||| |||||    
T  26281338 gagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactactttaaggtg 26281269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 32390130 - 32390061
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||   ||||| ||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  32390130 gagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 32390061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 37722963 - 37722894
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||| ||||||  |||| ||||||||||| | ||||||| ||||||||||||    
T  37722963 gagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 37722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 40090483 - 40090414
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||   ||| ||||||||||| | ||||||| ||||||||||||    
T  40090483 gagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtg 40090414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 6955173 - 6955125
Alignment:
Q  156 aaaatttataaaagttacccaaaaatgatgacaatgaaattttttattt 204  Q
    |||| ||||| |||||||||| |||||||| ||||||||||||||||||    
T  6955173 aaaaattatagaagttacccagaaatgatggcaatgaaattttttattt 6955125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 8255341 - 8255405
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| || ||||||| ||||||||| |  ||||||||||||||||||||||| |||| ||||||    
T  8255341 caaaaaaaataaaattgataaaagttgctaaaaaatgatgacaatgaaattttgtattactccat 8255405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 15270585 - 15270530
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| |||||||||||| ||||||| ||||||| ||||||||||||||| |||||||    
T  15270585 aaaaaaattaaaatttacaaaagtttcccaaaa-tgatgacaatgaaatcttttatt 15270530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 22303559 - 22303515
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  22303559 caaaaaaattgaaatttataaaagttgcccaaaaatgatgacaat 22303515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 32389974 - 32390069
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||   |||||||||||| |||| |||| |||||| | |||||||||||| | |||||  ||||||  ||||||| |||||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaa 32390069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 32470883 - 32470951
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggt 123  Q
    |||||| ||||||||||  ||||||||||  |||| ||||||||||||| |||||||||| ||| ||||    
T  32470883 gagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactattttaaggt 32470951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 9893867 - 9893802
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatg---atgacaatgaaattttttatttctcca 209  Q
    |||| ||||||||||||| |||||| ||||||||||   |||||| |||||||||||||| |||||    
T  9893867 aaaaaaattaaaatttatgaaagtttcccaaaaatgatgatgacattgaaattttttattactcca 9893802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 33245441 - 33245378
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||||||  |||||||||||  |||| |||||||||||   ||||||||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaactacttt 33245378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 37241324 - 37241289
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37241324 taaaatttataaaagttgcccaaaaatgatgacaat 37241289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 40643975 - 40643916
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaacta 114  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||    
T  40643975 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta 40643916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 16515009 - 16515074
Alignment:
Q  58 tgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||| |||||||||||  |||| ||| ||||||| | ||||||||| ||||||||||    
T  16515009 tgtgtttggatgga-gaatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtg 16515074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 31368238 - 31368288
Alignment:
Q  153 attaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||| |||||||||||||| |||||||  ||||||| ||||||||||||    
T  31368238 attaaagtttataaaagttactcaaaaatattgacaatcaaattttttatt 31368288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 32249818 - 32249766
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||| ||||||||||||||||||||  || |||||||||||| |||||||||||    
T  32249818 aaaaaaattaaaatttataaaagttgtcc-aaaatgatgacagtgaaatttttt 32249766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 34105413 - 34105476
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||| ||||||  || ||||||| ||||||||||||||| |||| ||||||    
T  34105413 caaaaaaattaaaatttacaaaagtggccaaaaaatg-tgacaatgaaattttgtattactccat 34105476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 38178999 - 38178951
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||||||||||||||||||| |||| |||||||| ||| || ||||||    
T  38178999 aattaaaatttataaaagttatccaataatgatgataattaattttttt 38178951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 38206223 - 38206175
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||||||||||||||||||| |||| |||||||| ||| || ||||||    
T  38206223 aattaaaatttataaaagttatccaataatgatgataattaattttttt 38206175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 31070425 - 31070509
Alignment:
Q  73 gaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  31070425 gaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataatt 31070509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 24241881 - 24241817
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  24241881 caaaaaaattaaaatttataaaagttgctcaaaaatgatgccaatgaaattttttatttctccat 24241817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 55460651 - 55460709
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  55460651 aatttaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattactccat 55460709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 6836723 - 6836666
Alignment:
Q  153 attaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  6836723 attaaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattgctccat 6836666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 44692980 - 44692911
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  44692980 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 44692911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 46707004 - 46707065
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctcc 208  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  46707004 aaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattactcc 46707065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 36397680 - 36397624
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  36397680 aaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttatt 36397624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 28092050 - 28092101
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  28092050 aattaaaatttataaaagtttcccaaaaatgatgacattgaaattttttatt 28092101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 7976929 - 7976994
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaa-ttttttatttctccat 210  Q
    ||||| ||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  7976929 caaaaaaatcaaaatttataaaagttgcccaaaaatgatggcaatgaaatttttttatttctccat 7976994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 44436259 - 44436355
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||| ||| |||||  |||||| |||||||| |||||||||    
T  44436259 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaa 44436355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 46672874 - 46672805
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  46672874 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 46672805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 34396313 - 34396257
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  34396313 aaaaaaattaaaatttattaaagttccccaaaaatgatgacattgaaattttttatt 34396257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 35279639 - 35279583
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  35279639 aaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttatt 35279583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 43863654 - 43863598
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||| |||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  43863654 aaaaaaattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttatt 43863598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 53470115 - 53470068
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  53470115 aattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttt 53470068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 46429434 - 46429499
Alignment:
Q  92 aatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||||||| | |||||||||||||| |||||  |||||| ||||||||||||||||||||||||    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataatt 46429499  T

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Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 671358 - 671301
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| || |||||||||||||||||  |||||||||||||||||||| |||||||||    
T  671358 caaaaaaaataaaatttataaaagttgtccaaaaatgatgacaatgaatttttttatt 671301  T

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Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 9129345 - 9129441
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    |||||||||||||||| ||| | ||||||  |||| ||||||||||| | |||||||||||||| || ||  |||||| |||||||| |||||||||    
T  9129345 gagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 9129441  T

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Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 9129502 - 9129433
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  9129502 gagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 9129433  T

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Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 9137452 - 9137548
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    |||||||||||||||| ||| | ||||||  |||| ||||||||||| | |||||||||||||| || ||  |||||| |||||||| |||||||||    
T  9137452 gagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 9137548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 9137609 - 9137540
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  9137609 gagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 9137540  T

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Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 27252052 - 27251983
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  | |||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  27252052 gagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 27251983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 31189074 - 31189025
Alignment:
Q  161 ttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  31189074 ttataaaagttgtccagaaatgatgacaatgaaattttttatttctccat 31189025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 38506654 - 38506601
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttt 199  Q
    ||||| |||||||||||||||||||| |||||||||||||| || |||||||||    
T  38506654 caaaaaaattaaaatttataaaagttgcccaaaaatgatgataaagaaattttt 38506601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 44692823 - 44692919
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||  ||||||||||| | |||||||| ||||| |||||  |||||| |||||||| |||||||||    
T  44692823 gagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaa 44692919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 47767433 - 47767502
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||||| ||||||| ||| ||||||||    
T  47767433 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 47767502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 7302773 - 7302836
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||| |||| ||||||||||||||| ||||||| |||||||||| || ||||||||| ||||||    
T  7302773 aaaaaaattgaaatttataaaagttgcccaaaagtgatgacaataaatttttttattactccat 7302836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 13176343 - 13176305
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  13176343 aattaaaatttataaaagttacccaaaaattatgacaat 13176305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 13339243 - 13339205
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  13339243 aattaaaatttataaaagttacccaaaaattatgacaat 13339205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 37054774 - 37054827
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  37054774 caaaaaaattgaaatttataaaagttgcccaaaaatgatgacaat-aaatttttt 37054827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 42005644 - 42005591
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  42005644 caaaaaaattgaaatttataaaagttgcccaaaaatgatgacaat-aaatttttt 42005591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 48947959 - 48948013
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    ||||| |||||||||||||||||||| || ||||||||||||| |||| ||||||    
T  48947959 caaaaaaattaaaatttataaaagttgcctaaaaatgatgacagtgaattttttt 48948013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 7302347 - 7302416
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   ||||||||||| ||||| ||||||||||||| ||||||  ||| ||||||||    
T  7302347 gagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtg 7302416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 21731298 - 21731355
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| ||||||||||||||||||||   ||||||||||||||||||| ||| |||||    
T  21731298 caaaaaaattaaaatttataaaagttgttcaaaaatgatgacaatgaattttattatt 21731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 34936607 - 34936550
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaa-tgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||| || ||||| ||||||||| ||||||||||||| ||||||    
T  34936607 ttaaaatttataaaagttgccaaaaaaatgatgacaaagaaattttttattactccat 34936550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 37054395 - 37054464
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  ||||||||| |  |||| ||||||||||||| ||||||| ||| ||||||||    
T  37054395 gagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtg 37054464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 42006024 - 42005955
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||||| |||| || ||| ||||||||    
T  42006024 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtg 42005955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 48947606 - 48947675
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||||||||||||||||  |||| || ||||||||   ||||||| ||||||| ||||    
T  48947606 gagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtg 48947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 49457344 - 49457413
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||| ||||| |||||    
T  49457344 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaaccactttaaggtg 49457413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 53129595 - 53129543
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  53129595 aaaaaaattaaaatttataaa-gttgcccaaaaatgatgacaatgaattttttt 53129543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 31022051 - 31022095
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  31022051 caaaaaaattaaaatttataaaagttgcccaaaaattatgacaat 31022095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 46636203 - 46636251
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaat 195  Q
    |||| ||||||||||||||||||||  |||||||| |||||||||||||    
T  46636203 aaaaaaattaaaatttataaaagttgtccaaaaattatgacaatgaaat 46636251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 44288194 - 44288131
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctcca 209  Q
    ||||| ||||||||||||||||||||   ||||||| || ||||| || |||||||||||||||    
T  44288194 caaaaaaattaaaatttataaaagttgttcaaaaattataacaataaatttttttatttctcca 44288131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 47337502 - 47337553
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||||||  ||||||| ||||||||| ||| ||||||||    
T  47337502 aattaaaatttataaaagttttccaaaaacgatgacaataaaactttttatt 47337553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 19475824 - 19475886
Alignment:
Q  62 tttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||| |||||||||||  |||| ||||||| ||| | ||||||| ||||||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtg 19475886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 21307600 - 21307534
Alignment:
Q  58 tgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||  ||||||||||   |||| ||||||||||| | ||||||| ||||||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtg 21307534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 34088959 - 34088997
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatga 192  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  34088959 ttaatatttataaaagttgcccaaaaatgatgacaatga 34088997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 39110395 - 39110461
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgag 121  Q
    ||||||||||||||| |  ||||||||||  |||| ||||||||||  | |||||||||||||||||    
T  39110395 gagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgag 39110461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 44288525 - 44288467
Alignment:
Q  60 tgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    |||||||||||| |||||||||||   ||||||||||||||| | ||||||| ||||||    
T  44288525 tgtttggatggaggaatgttttgaggtaatataatgttttgatggaattcaaatacttt 44288467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 47284268 - 47284329
Alignment:
Q  96 ttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    |||||| | |||||| |||||||||||||  |||||| ||||||||| ||||||||||||||    
T  47284268 ttttgagggaattcagctactttgaggtgaattctattgtttgaatcaacctcaaaataatt 47284329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 52527039 - 52527105
Alignment:
Q  57 gtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggt 123  Q
    ||||||||||||||  |||||||||||| | || ||||||| || || ||||||| |||||||||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttgaggt 52527105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 2732951 - 2733000
Alignment:
Q  161 ttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||| |||  |||||||||||||||||||| ||||||||| ||||||    
T  2732951 ttataaatgttgtccaaaaatgatgacaatgaatttttttattactccat 2733000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 5415784 - 5415853
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||| |  |||| ||||||  |||| ||||||||||| | |||||||||||||| |||||    
T  5415784 gagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtg 5415853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 5415941 - 5415872
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||| ||||||  |||  ||||||||||| | |||||||||||||| |||||    
T  5415941 gagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtg 5415872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 34088572 - 34088641
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||||  ||||||||||  |||| || |||||||| | ||||||| ||||||| ||||    
T  34088572 gagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtg 34088641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 36398060 - 36397991
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||  |||||||||||  |||| || |||||||| | ||||||| ||||||| ||||    
T  36398060 gagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtg 36397991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 39215889 - 39215941
Alignment:
Q  105 aattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataatt 155  Q
    ||||||| ||||||||||||  || ||| ||||||||||||||||||||||||    
T  39215889 aattcaattactttgaggtgaattttattgtttgaatccacctcaaaataatt 39215941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 47767816 - 47767869
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||||||||| ||||||||||||||| || |  ||||||||| ||||||    
T  47767816 aaatttataaaagttgcccaaaaatgatgacgataattttttttattactccat 47767869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 50168356 - 50168307
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatt 196  Q
    ||||| |||||||| |||||||||| |  |||||||||||||||||||||    
T  50168356 aaaattattaaaatgtataaaagttgctaaaaaatgatgacaatgaaatt 50168307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 52527416 - 52527453
Alignment:
Q  173 cccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  52527416 cccaaaaataatgacaatgaaattttttattactccat 52527453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 83
Target Start/End: Complemental strand, 332115 - 332087
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttga 83  Q
    |||||||||||||||||||||||||||||    
T  332115 gagtgtgtttggatggaagaatgttttga 332087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 645904 - 645841
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||| |||||||  |||||||| |||||||| |  ||||||||| ||||||    
T  645904 caaaataattaaaatttacaaaagttgtccaaaaat-atgacaattagtttttttattactccat 645841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 7976566 - 7976618
Alignment:
Q  72 agaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||| |||| ||||||||||||| |||| || ||| ||||||||    
T  7976566 agaatgttttgaaggaatgtaatgttttgaaggaatttaaatacattgaggtg 7976618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 36636203 - 36636255
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaatttt 198  Q
    ||||| ||| |||| |||| |||||| | ||||||||||||||||||||||||    
T  36636203 caaaaaaataaaaaattatgaaagttgctcaaaaatgatgacaatgaaatttt 36636255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 47283970 - 47283926
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    ||||| ||||||||||||||||||||  |||||||| ||||||||    
T  47283970 caaaaaaattaaaatttataaaagttgtccaaaaattatgacaat 47283926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 19477 - 19413
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  19477 caaaaaaattaaaatttataaaagctgcccaaaaatgatgacaatgaaattttttattactccat 19413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 9e-18; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 9763014 - 9763115
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaaataa 153  Q
    |||||||||||| ||   ||||||||||  |||| ||||||||||| | ||||||||||||||||||||  |||||| |||||||||||||||| |||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataa 9763113  T
Q  154 tt 155  Q
    ||    
T  9763114 tt 9763115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 9285648 - 9285744
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||| ||  |||||| |||||||| || ||||||    
T  9285648 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaa 9285744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 6919710 - 6919778
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||| ||||| |||||  |||| ||||||||||| | ||||||||||||||||||||    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtg 6919778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 15299579 - 15299514
Alignment:
Q  58 tgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||  |||||||||||  |||| ||||||||||||| ||||||||||||||||||||    
T  15299579 tgtgtttggatggg-gaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtg 15299514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 8475508 - 8475565
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| |||||||||||||||||| |  |||||||||||||||||||| |||||||||    
T  8475508 caaaaaaattaaaatttataaaagctgtccaaaaatgatgacaatgaatttttttatt 8475565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 28918166 - 28918235
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||| | | ||||||| ||||||||||||    
T  28918166 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtg 28918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 29889506 - 29889441
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | ||||||| ||||||||    
T  29889506 gagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttga 29889441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 34245052 - 34244987
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||||||||| |||||||||||  |||| ||||||||||| | ||||||| ||||||||    
T  34245052 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 34244987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 1368859 - 1368907
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaatttttt 200  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  1368859 aattaaaacttataaaagttgcccaaaaatgatgacaatgaattttttt 1368907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 31413248 - 31413296
Alignment:
Q  155 taaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||    
T  31413248 taaaatttataaaagttgcccaaaaatgatgacaataaatttttttatt 31413296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 776238 - 776152
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaat 139  Q
    |||||||||||||| | | ||||||||||  |||| ||||||||||| | |||||||||||||| |||||  |||||| ||||||||    
T  776238 gagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttgaat 776152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 28918537 - 28918600
Alignment:
Q  147 aaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||| |||||||| |||||||||||  ||||||||||||||||| || ||||||||| ||||||    
T  28918537 aaaaaaattaaaacttataaaagttgtccaaaaatgatgacaataaatttttttattactccat 28918600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 776081 - 776144
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    |||||||||| ||||||  ||||||||||  |||| ||||||||||| | ||||||||||||||    
T  776081 gagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 776144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 8574696 - 8574759
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||||||   ||||||||||  |||| ||||||||||| | ||||||||||||||    
T  8574696 gagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaactacttt 8574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 8574823 - 8574760
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactacttt 118  Q
    ||||||||||||||||   ||||||||||  |||| ||||||||||| | ||||||||||||||    
T  8574823 gagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaactacttt 8574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 10105396 - 10105442
Alignment:
Q  157 aaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| || | ||||||||||||||||||||| ||||    
T  10105396 aaatttataaaagttgccaagaaatgatgacaatgaaattttgtatt 10105442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 15832992 - 15833030
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  15832992 aattaaaatttataaaagttgcccaaaaattatgacaat 15833030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 1368478 - 1368547
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||||| ||||||||||| ||||| |||| |||| | | ||||||| |  |||||||||    
T  1368478 gagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtg 1368547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 6919865 - 6919770
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg--ttctatcgtttgaatccacctcaaa 149  Q
    ||||||||||||||||  |||||||||||  |||  ||||||||||| | |||||||| | ||| |||||  |||||| |||||||| |||||||||    
T  6919865 gagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaacca-tttaaggtgaattctattgtttgaattcacctcaaa 6919770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 15299412 - 15299469
Alignment:
Q  67 atggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||| |||||||||||  |||| |||||||||||   ||||||||||||||||||||    
T  15299412 atggaggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtg 15299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 1195700 - 1195755
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttat 202  Q
    ||||| |||||||| |||||||| || |||||||||||| |||||||| ||||||||    
T  1195700 caaaaaaattaaaaattataaaatttgcccaaaaatgat-acaatgaatttttttat 1195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 15616077 - 15616026
Alignment:
Q  158 aatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||| | ||||| ||||||||||| ||||||||||| ||||||    
T  15616077 aatttataaaagtttctcaaaa-tgatgacaatggaattttttattactccat 15616026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 4184 - 4126
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||    
T  4184 aattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactccat 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 4570 - 4501
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   |||||||||||  |||||||||||||||| | ||||||| || |||| ||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtg 4501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 4828 - 4770
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||    
T  4828 aattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactccat 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 5214 - 5145
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||   |||||||||||  |||||||||||||||| | ||||||| || |||| ||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtg 5145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 41998 - 42067
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||| ||||| |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  41998 gagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 42067  T

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Target: scaffold1562 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 562 - 494
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 494  T

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Target: scaffold1562; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 406 - 468
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactt 117  Q
    ||||||||||||||||  |||| ||||||  ||| |||||||||||| | |||||||||||||    
T  406 gagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactactt 468  T

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Target: scaffold1158 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 2031 - 2099
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||||||||||  |||| ||||||||||| | ||||||||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 2099  T

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Target: scaffold1158; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 2187 - 2125
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactt 117  Q
    ||||||||||||||||  |||| ||||||  ||| |||||||||||| | |||||||||||||    
T  2187 gagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactactt 2125  T

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Target: scaffold0318 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 3244 - 3293
Alignment:
Q  154 ttaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  3244 ttaaaatttataaaaggttcccaaaaatgatgataatgaaattttttatt 3293  T

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Target: scaffold0301 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 7531 - 7588
Alignment:
Q  146 caaaataattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  7531 caaaaaaaataaaatttataaaagttgcccaaaaatgatgacaatgaatatttttatt 7588  T

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Target: scaffold0169 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 4076 - 4145
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    ||||||||||||||  | ||||||||||| ||||| ||||||||||| | ||||||| ||||||||||||    
T  4076 gagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtg 4145  T

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Target: scaffold0169; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 4414 - 4462
Alignment:
Q  162 tataaaagttacccaaaaatgatgacaatgaaattttttatttctccat 210  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  4414 tataaaagttgcccaaaaatgatgacaatgaaatttttgattactccat 4462  T

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Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 82945 - 83013
Alignment:
Q  56 agtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttgaggtg 124  Q
    |||||||||||||||  |||||||||||  |||| ||||||||||| | |||||||||||||| |||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtg 83013  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 223468 - 223419
Alignment:
Q  153 attaaaatttataaaagttacccaaaaatgatgacaatgaaattttttatt 203  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  223468 attaaaatttataaa-gttgcccaaaaatgatgacaatgaatttttttatt 223419  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 130645 - 130683
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  130645 aattaaaatttataaaagttacccaaaaattatgacaat 130683  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 10887 - 10952
Alignment:
Q  55 gagtgtgtttggatggaagaatgttttgaaagaatataatgttttgaagcaattcaactactttga 120  Q
    ||||||||||| ||||||||||||||| |  |||| ||||||||||| | ||||||| ||||||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttga 10952  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 50000 - 49962
Alignment:
Q  152 aattaaaatttataaaagttacccaaaaatgatgacaat 190  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  50000 aattaaaatttataaaagttgcccaaaaattatgacaat 49962  T

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