View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20147_low_24 (Length: 310)
Name: NF20147_low_24
Description: NF20147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20147_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 51 - 292
Target Start/End: Original strand, 12811757 - 12811995
Alignment:
| Q |
51 |
aaaattaaacaatgtcacactaaaacgatgaacgaaacaactcaacacttaaacaacaaaattacagagaatacaaatgaaagaggaaatctacatggaa |
150 |
Q |
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| T |
12811757 |
aaaattaaacaatgtcgtactaaaatgataaacgaaacaactcaacacttagacaacaaaa---cagagaatacaaatgaaagaggaaatctacatggaa |
12811853 |
T |
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| Q |
151 |
actacttatttagataaaagatatacatatgggtgattcaaagaaaaaatggtcccaaacaaactctctcaagtgatgaggatgaatgaacaaaaatttc |
250 |
Q |
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| T |
12811854 |
actacttatttagataaaagatatacatatgggtgattcaaagaaaaaatggccccaaacaaactctctcaagtgatgaggatgaatgaacaaaaatttc |
12811953 |
T |
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| Q |
251 |
aagagagagacagtggaaatccaacaattagatggggaaaag |
292 |
Q |
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| T |
12811954 |
aagagagagacagtggaaatccaacaattagatggggaaaag |
12811995 |
T |
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