View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_high_115 (Length: 208)
Name: NF2014_high_115
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_high_115 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 41066370 - 41066540
Alignment:
| Q |
20 |
gaaagccatgaaagtagagagagaccttcttggtttagagaagaaatgaatggaaacaaggagatagtgagaaacaagataagaaaatttaatgcattgt |
119 |
Q |
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| T |
41066370 |
gaaagccatgaaagtagagagagaccttcttggtttagagaagaaatgaatggaaacaaggagatagtgagaaacaagataagaaaatttaatgcattgt |
41066469 |
T |
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| Q |
120 |
ttgacatgatgagttggttttctgctactgttctatctcatctaaaacatagcagcagtactattttttct |
190 |
Q |
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| T |
41066470 |
ttgacatgatgagttggttttctgctactgttctatctcatctaaaacatagcagcagtactagtttttct |
41066540 |
T |
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