View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_high_119 (Length: 202)
Name: NF2014_high_119
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_high_119 |
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Alignment Details
Target: chr3 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 51185522 - 51185385
Alignment:
| Q |
50 |
ttcacgaagaattgctctctttcatcttctcaccactggtggtattggtaatctctctacttttcaccacctcatcctcaaagccttcattcatgtattt |
149 |
Q |
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| T |
51185522 |
ttcacgaagaattgctctctttcatcttctcaccactggtggtattggtaatctctctacttttcaccacctcatcctcaaagccttcattcatgtattt |
51185423 |
T |
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| Q |
150 |
atctatttatgttatgactttgacttagttagttctct |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
51185422 |
atctatttatgttatgactttgacttagttagttctct |
51185385 |
T |
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