View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_high_30 (Length: 383)
Name: NF2014_high_30
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 47582631 - 47582266
Alignment:
| Q |
1 |
agaagatgatgataggtggtgccggaagaagatggtgtcccggcatgggaccatacaacaaaccaatgggtattatgcatggaactgaagaaagctaaat |
100 |
Q |
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| T |
47582631 |
agaagatgatgataggtggtgccggaagaagatggtgtcccggcatgcgaccatacaacaaaccaatgggtattatgcatggaactgaagaaagctaaat |
47582532 |
T |
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| Q |
101 |
gtgacaccaaatacctatttcttaggctctgcaagttaacaaacaccaaagaaagacacctcaaccttaaaaatagtaagaaaaattaacagggtacgaa |
200 |
Q |
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| T |
47582531 |
gtgacaccaaatacctatttcttaggctctgcaagttaacaaacaccaaagaaagacacctcaaccttaaaaatagtaagaaaaattattagggtacgaa |
47582432 |
T |
|
| Q |
201 |
agacaaggttttacacttttatttaaatagaagtctcttgtttatatatgattnnnnnnnntagaaaaggaaaaggagttaaaaccaattcactttataa |
300 |
Q |
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| T |
47582431 |
agacaaggttttacacttttatttaaatagaagtctcttctttatatatgattaaaaaaaa-atagaaggaaaaggagttaaaaccaattcactttaaaa |
47582333 |
T |
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| Q |
301 |
aacaaccttataatggtttacatgacaaacctatttttgaattttggatatccctaccctgcatggt |
367 |
Q |
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| T |
47582332 |
aacaaccttataatggtttacatgacaaacctatttttgaattttggatatccctaccctgcatggt |
47582266 |
T |
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