View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2014_high_36 (Length: 368)

Name: NF2014_high_36
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2014_high_36
NF2014_high_36
[»] chr5 (48 HSPs)
chr5 (9-368)||(29307268-29307630)
chr5 (205-365)||(8959557-8959717)
chr5 (207-364)||(16153430-16153587)
chr5 (207-325)||(8506356-8506474)
chr5 (205-324)||(1144622-1144740)
chr5 (221-324)||(10154053-10154156)
chr5 (206-365)||(3463899-3464059)
chr5 (207-322)||(28906987-28907102)
chr5 (207-322)||(28943382-28943497)
chr5 (205-315)||(6391786-6391896)
chr5 (207-325)||(12912418-12912535)
chr5 (85-169)||(29298373-29298454)
chr5 (207-321)||(35275353-35275466)
chr5 (207-321)||(32079424-32079538)
chr5 (207-324)||(5659646-5659766)
chr5 (214-323)||(3103452-3103560)
chr5 (225-322)||(8146140-8146236)
chr5 (207-290)||(42273549-42273632)
chr5 (210-321)||(30086676-30086786)
chr5 (232-322)||(12638832-12638921)
chr5 (232-322)||(31690747-31690836)
chr5 (207-278)||(8225363-8225434)
chr5 (207-322)||(24439490-24439604)
chr5 (210-322)||(13146650-13146761)
chr5 (207-307)||(16286225-16286324)
chr5 (271-319)||(5369161-5369209)
chr5 (232-322)||(8541691-8541780)
chr5 (207-259)||(12730196-12730248)
chr5 (207-321)||(35462846-35462959)
chr5 (267-322)||(2002260-2002315)
chr5 (207-290)||(25840763-25840846)
chr5 (225-322)||(37066350-37066446)
chr5 (208-266)||(30893534-30893592)
chr5 (208-269)||(104419-104480)
chr5 (207-260)||(9957624-9957677)
chr5 (207-322)||(20914777-20914891)
chr5 (17-70)||(29298444-29298496)
chr5 (265-322)||(42365010-42365067)
chr5 (207-251)||(11262070-11262114)
chr5 (207-259)||(12793016-12793068)
chr5 (334-365)||(1144575-1144606)
chr5 (219-290)||(4463271-4463342)
chr5 (207-286)||(34425230-34425309)
chr5 (207-290)||(39505411-39505493)
chr5 (207-307)||(25962594-25962693)
chr5 (207-322)||(8143852-8143966)
chr5 (211-322)||(24432527-24432637)
chr5 (245-321)||(34049734-34049810)
[»] chr3 (62 HSPs)
chr3 (207-363)||(22479099-22479255)
chr3 (207-365)||(2994461-2994619)
chr3 (207-365)||(22456051-22456209)
chr3 (207-365)||(10251928-10252086)
chr3 (207-365)||(21214158-21214316)
chr3 (219-362)||(49583894-49584037)
chr3 (207-365)||(10114829-10114986)
chr3 (207-368)||(38401297-38401458)
chr3 (207-365)||(47444016-47444177)
chr3 (232-368)||(48291764-48291900)
chr3 (209-325)||(34194807-34194923)
chr3 (207-325)||(30454807-30454926)
chr3 (245-365)||(10014224-10014344)
chr3 (207-325)||(54725686-54725804)
chr3 (218-325)||(7886700-7886808)
chr3 (207-317)||(23209371-23209481)
chr3 (213-306)||(6784257-6784348)
chr3 (244-368)||(8097058-8097182)
chr3 (208-353)||(25242233-25242379)
chr3 (207-321)||(32070164-32070277)
chr3 (253-324)||(29676531-29676602)
chr3 (205-325)||(12128753-12128872)
chr3 (207-362)||(7614967-7615120)
chr3 (234-317)||(27876005-27876088)
chr3 (210-322)||(55400658-55400769)
chr3 (223-322)||(17587646-17587746)
chr3 (207-322)||(36189095-36189209)
chr3 (205-319)||(13541192-13541305)
chr3 (210-322)||(21654164-21654276)
chr3 (207-290)||(50651174-50651257)
chr3 (210-322)||(1335030-1335141)
chr3 (210-322)||(26641201-26641312)
chr3 (207-325)||(41935539-41935656)
chr3 (210-322)||(46580456-46580567)
chr3 (208-301)||(44566895-44566987)
chr3 (207-321)||(32322329-32322442)
chr3 (271-323)||(46918298-46918350)
chr3 (207-290)||(2927192-2927275)
chr3 (207-278)||(14752357-14752428)
chr3 (207-286)||(37074862-37074941)
chr3 (242-324)||(16033071-16033153)
chr3 (210-322)||(23513487-23513598)
chr3 (210-322)||(31126132-31126243)
chr3 (220-322)||(53020112-53020214)
chr3 (265-322)||(37324173-37324230)
chr3 (207-322)||(45781314-45781428)
chr3 (207-322)||(46819966-46820080)
chr3 (205-322)||(51255103-51255217)
chr3 (205-322)||(28793076-28793193)
chr3 (205-260)||(6752569-6752624)
chr3 (207-254)||(29676885-29676931)
chr3 (207-278)||(33974708-33974779)
chr3 (207-303)||(16739263-16739358)
chr3 (220-321)||(43575888-43575987)
chr3 (272-322)||(46303525-46303575)
chr3 (220-261)||(579315-579356)
chr3 (207-260)||(7866650-7866703)
chr3 (207-260)||(20847439-20847492)
chr3 (259-319)||(49068018-49068079)
chr3 (205-278)||(51311574-51311646)
chr3 (207-251)||(11054453-11054497)
chr3 (274-322)||(51309396-51309444)
[»] chr4 (52 HSPs)
chr4 (207-365)||(23978192-23978350)
chr4 (207-365)||(37911801-37911959)
chr4 (207-365)||(28318494-28318652)
chr4 (207-365)||(28142699-28142857)
chr4 (207-317)||(8013214-8013324)
chr4 (207-365)||(47516268-47516426)
chr4 (210-324)||(53848387-53848501)
chr4 (207-321)||(46070641-46070756)
chr4 (207-325)||(5841896-5842014)
chr4 (205-365)||(40411016-40411176)
chr4 (207-325)||(8178356-8178473)
chr4 (205-365)||(49080170-49080332)
chr4 (233-368)||(32410271-32410406)
chr4 (207-317)||(40553687-40553796)
chr4 (210-322)||(29180505-29180616)
chr4 (206-292)||(29511362-29511446)
chr4 (276-365)||(5064732-5064821)
chr4 (220-322)||(30776577-30776678)
chr4 (220-322)||(30777413-30777514)
chr4 (207-321)||(32012421-32012534)
chr4 (207-321)||(38940782-38940895)
chr4 (210-322)||(39970082-39970193)
chr4 (210-322)||(52712979-52713090)
chr4 (210-322)||(53677572-53677683)
chr4 (207-322)||(37788364-37788478)
chr4 (207-322)||(50768358-50768472)
chr4 (207-278)||(17186965-17187036)
chr4 (207-322)||(30012045-30012160)
chr4 (232-320)||(10591598-10591685)
chr4 (207-307)||(55937811-55937910)
chr4 (213-262)||(4512954-4513003)
chr4 (207-322)||(29899628-29899742)
chr4 (220-264)||(8018308-8018352)
chr4 (207-259)||(39078055-39078107)
chr4 (225-319)||(43980429-43980522)
chr4 (259-322)||(47807158-47807222)
chr4 (210-319)||(3043263-3043371)
chr4 (207-322)||(5222386-5222505)
chr4 (211-266)||(21181111-21181166)
chr4 (207-290)||(42915427-42915509)
chr4 (207-322)||(38187819-38187933)
chr4 (225-319)||(9798171-9798264)
chr4 (207-251)||(41414788-41414832)
chr4 (259-322)||(49901990-49902054)
chr4 (207-278)||(16605018-16605089)
chr4 (207-286)||(35310918-35310997)
chr4 (207-290)||(35529569-35529652)
chr4 (207-290)||(48793798-48793880)
chr4 (259-321)||(51495112-51495175)
chr4 (225-290)||(8683475-8683540)
chr4 (207-251)||(2229176-2229220)
chr4 (207-251)||(14332688-14332732)
[»] chr2 (44 HSPs)
chr2 (207-368)||(32010021-32010182)
chr2 (207-365)||(26998236-26998394)
chr2 (207-365)||(38070915-38071072)
chr2 (209-365)||(32273592-32273748)
chr2 (219-361)||(20380054-20380196)
chr2 (205-325)||(8032792-8032912)
chr2 (207-322)||(9709433-9709547)
chr2 (221-365)||(4891722-4891866)
chr2 (220-325)||(11031046-11031151)
chr2 (207-365)||(44442052-44442208)
chr2 (218-325)||(16179823-16179930)
chr2 (213-317)||(921677-921782)
chr2 (222-325)||(33933042-33933146)
chr2 (210-322)||(792482-792593)
chr2 (207-322)||(21539673-21539787)
chr2 (210-318)||(15858740-15858847)
chr2 (205-322)||(14565499-14565616)
chr2 (207-322)||(38549769-38549883)
chr2 (210-319)||(8784314-8784422)
chr2 (205-322)||(28424188-28424304)
chr2 (210-322)||(29514145-29514256)
chr2 (225-319)||(22162253-22162347)
chr2 (207-322)||(33635252-33635366)
chr2 (274-322)||(15068717-15068765)
chr2 (220-322)||(43075679-43075780)
chr2 (207-278)||(19263999-19264070)
chr2 (205-318)||(28492434-28492546)
chr2 (207-290)||(29524219-29524301)
chr2 (207-306)||(44545400-44545499)
chr2 (220-322)||(44803828-44803928)
chr2 (205-321)||(4033802-4033917)
chr2 (272-322)||(13822896-13822946)
chr2 (210-322)||(29514601-29514711)
chr2 (273-322)||(9294636-9294685)
chr2 (220-322)||(5091666-5091769)
chr2 (205-269)||(5280679-5280743)
chr2 (205-319)||(35832326-35832439)
chr2 (232-290)||(8701526-8701584)
chr2 (207-269)||(33198833-33198895)
chr2 (207-260)||(45660262-45660315)
chr2 (207-251)||(6110386-6110430)
chr2 (209-269)||(11616925-11616985)
chr2 (207-290)||(25571944-25572028)
chr2 (222-266)||(28678828-28678871)
[»] chr6 (26 HSPs)
chr6 (206-368)||(4987859-4988021)
chr6 (207-365)||(3888344-3888502)
chr6 (207-365)||(4031904-4032062)
chr6 (207-325)||(5300717-5300834)
chr6 (253-365)||(16524343-16524454)
chr6 (221-323)||(15830626-15830728)
chr6 (207-307)||(5822162-5822263)
chr6 (207-291)||(1130436-1130520)
chr6 (207-307)||(5881894-5881994)
chr6 (205-322)||(30949049-30949165)
chr6 (210-319)||(10227831-10227939)
chr6 (210-322)||(17721936-17722047)
chr6 (207-321)||(17598209-17598322)
chr6 (220-322)||(374028-374129)
chr6 (298-365)||(16013516-16013583)
chr6 (207-322)||(31887248-31887363)
chr6 (210-322)||(12278625-12278736)
chr6 (209-266)||(2851479-2851536)
chr6 (207-259)||(16013580-16013632)
chr6 (220-322)||(33756185-33756286)
chr6 (267-322)||(32882820-32882875)
chr6 (210-322)||(30766365-30766476)
chr6 (233-286)||(13854852-13854905)
chr6 (207-251)||(3095907-3095951)
chr6 (207-251)||(21542349-21542393)
chr6 (207-251)||(34177827-34177871)
[»] chr1 (64 HSPs)
chr1 (207-365)||(7397626-7397783)
chr1 (207-324)||(35366328-35366445)
chr1 (205-365)||(37538726-37538886)
chr1 (207-325)||(5858495-5858614)
chr1 (210-365)||(15912122-15912275)
chr1 (207-322)||(41063660-41063775)
chr1 (207-307)||(51339040-51339140)
chr1 (207-322)||(16661434-16661549)
chr1 (256-362)||(25185391-25185497)
chr1 (207-307)||(51840638-51840738)
chr1 (221-368)||(30701466-30701611)
chr1 (207-325)||(5950358-5950476)
chr1 (219-365)||(13351611-13351757)
chr1 (205-325)||(43359607-43359727)
chr1 (262-365)||(44510303-44510406)
chr1 (207-325)||(34102097-34102213)
chr1 (207-317)||(46804663-46804773)
chr1 (232-321)||(13050294-13050383)
chr1 (207-321)||(26907220-26907333)
chr1 (210-322)||(40219976-40220086)
chr1 (207-321)||(18036461-18036573)
chr1 (210-322)||(44875098-44875209)
chr1 (207-365)||(45840149-45840290)
chr1 (225-323)||(50176448-50176545)
chr1 (220-322)||(28916645-28916746)
chr1 (210-322)||(25990667-25990778)
chr1 (207-322)||(29488664-29488778)
chr1 (207-325)||(52841569-52841689)
chr1 (207-290)||(33431460-33431543)
chr1 (210-322)||(23873957-23874068)
chr1 (210-322)||(46949240-46949351)
chr1 (207-269)||(47026394-47026456)
chr1 (207-322)||(4529103-4529217)
chr1 (220-319)||(28017587-28017685)
chr1 (205-322)||(36383842-36383958)
chr1 (207-322)||(38942571-38942685)
chr1 (259-322)||(18852189-18852253)
chr1 (259-322)||(43656167-43656231)
chr1 (207-278)||(1820315-1820386)
chr1 (207-290)||(6786737-6786820)
chr1 (206-281)||(25185497-25185572)
chr1 (207-278)||(28016934-28017005)
chr1 (219-322)||(37192879-37192981)
chr1 (207-290)||(44149011-44149093)
chr1 (207-269)||(7468152-7468214)
chr1 (210-322)||(15285723-15285834)
chr1 (207-307)||(49924335-49924434)
chr1 (210-321)||(9127962-9128072)
chr1 (207-322)||(40935743-40935857)
chr1 (207-322)||(40960604-40960718)
chr1 (207-278)||(15959830-15959901)
chr1 (220-321)||(39026377-39026477)
chr1 (207-297)||(46542881-46542972)
chr1 (207-290)||(47600218-47600301)
chr1 (271-365)||(16688119-16688213)
chr1 (210-322)||(35941760-35941871)
chr1 (207-296)||(4672799-4672887)
chr1 (276-321)||(8889818-8889863)
chr1 (207-322)||(31970439-31970552)
chr1 (207-251)||(2125968-2126012)
chr1 (207-251)||(12449153-12449197)
chr1 (207-251)||(32624192-32624236)
chr1 (207-251)||(39555772-39555816)
chr1 (259-322)||(47996920-47996984)
[»] chr8 (62 HSPs)
chr8 (207-365)||(17314747-17314905)
chr8 (219-365)||(25195131-25195278)
chr8 (242-365)||(41362392-41362515)
chr8 (207-365)||(8673299-8673456)
chr8 (207-325)||(17713140-17713258)
chr8 (205-367)||(41791543-41791704)
chr8 (207-365)||(26954477-26954635)
chr8 (208-325)||(28497638-28497755)
chr8 (206-368)||(2628246-2628408)
chr8 (207-317)||(5217309-5217419)
chr8 (261-365)||(17336713-17336817)
chr8 (205-365)||(4038966-4039127)
chr8 (221-325)||(27819590-27819694)
chr8 (207-325)||(14576270-14576385)
chr8 (207-365)||(8745502-8745658)
chr8 (213-325)||(12893899-12894010)
chr8 (205-325)||(25321711-25321830)
chr8 (221-365)||(29147322-29147465)
chr8 (207-322)||(34899841-34899957)
chr8 (207-322)||(3099871-3099986)
chr8 (225-322)||(27621067-27621163)
chr8 (206-325)||(27740524-27740641)
chr8 (207-278)||(35525496-35525567)
chr8 (207-262)||(38072114-38072169)
chr8 (210-322)||(35259979-35260090)
chr8 (207-322)||(11043976-11044090)
chr8 (272-325)||(14693365-14693418)
chr8 (207-322)||(24612608-24612722)
chr8 (296-365)||(38072169-38072238)
chr8 (207-321)||(36537977-36538090)
chr8 (207-278)||(24892736-24892807)
chr8 (207-289)||(4047075-4047156)
chr8 (221-315)||(8712452-8712545)
chr8 (210-322)||(37597992-37598103)
chr8 (207-322)||(27752505-27752619)
chr8 (207-322)||(32678637-32678751)
chr8 (207-325)||(17749690-17749805)
chr8 (267-322)||(2238721-2238776)
chr8 (207-278)||(34890365-34890436)
chr8 (207-322)||(44052539-44052654)
chr8 (225-322)||(44358619-44358715)
chr8 (265-322)||(11992704-11992761)
chr8 (261-321)||(31133158-31133219)
chr8 (207-322)||(33851151-33851265)
chr8 (213-278)||(34158482-34158547)
chr8 (205-269)||(30576027-30576091)
chr8 (259-322)||(37567559-37567623)
chr8 (259-322)||(39187202-39187266)
chr8 (221-297)||(40773560-40773636)
chr8 (205-249)||(41362846-41362890)
chr8 (274-322)||(41426324-41426372)
chr8 (207-290)||(13144141-13144223)
chr8 (275-322)||(34713514-34713561)
chr8 (207-290)||(36190669-36190752)
chr8 (227-297)||(2052753-2052823)
chr8 (259-321)||(40487794-40487856)
chr8 (207-318)||(16635494-16635604)
chr8 (232-319)||(44411340-44411426)
chr8 (207-251)||(7022590-7022634)
chr8 (207-251)||(7858457-7858501)
chr8 (207-290)||(8107798-8107881)
chr8 (209-261)||(33563718-33563770)
[»] chr7 (51 HSPs)
chr7 (207-365)||(35888052-35888209)
chr7 (219-365)||(31769045-31769190)
chr7 (207-368)||(38260234-38260396)
chr7 (205-324)||(39170452-39170570)
chr7 (207-317)||(22369145-22369255)
chr7 (207-322)||(36576333-36576447)
chr7 (207-286)||(25651422-25651501)
chr7 (210-322)||(45598822-45598933)
chr7 (255-324)||(3777945-3778014)
chr7 (206-263)||(24151764-24151821)
chr7 (211-322)||(39348708-39348818)
chr7 (232-322)||(23106393-23106482)
chr7 (225-322)||(48879321-48879417)
chr7 (223-317)||(33092770-33092864)
chr7 (209-321)||(47383323-47383434)
chr7 (207-322)||(3157351-3157465)
chr7 (207-322)||(44600361-44600475)
chr7 (220-322)||(42617599-42617700)
chr7 (210-322)||(43107990-43108102)
chr7 (267-322)||(33153013-33153068)
chr7 (225-322)||(34808152-34808248)
chr7 (225-322)||(35181125-35181221)
chr7 (267-321)||(30082327-30082381)
chr7 (205-251)||(39174179-39174225)
chr7 (248-308)||(29713149-29713209)
chr7 (207-278)||(25944476-25944547)
chr7 (207-322)||(37767145-37767255)
chr7 (207-322)||(19933140-19933254)
chr7 (207-322)||(19964279-19964393)
chr7 (207-322)||(41815778-41815892)
chr7 (258-322)||(6882371-6882434)
chr7 (220-322)||(23731488-23731589)
chr7 (206-250)||(46760444-46760488)
chr7 (207-278)||(4910822-4910893)
chr7 (274-325)||(18800856-18800907)
chr7 (283-322)||(28608363-28608402)
chr7 (207-290)||(35069013-35069095)
chr7 (220-321)||(40583073-40583173)
chr7 (207-290)||(47778672-47778754)
chr7 (225-321)||(22111416-22111511)
chr7 (205-321)||(40560295-40560410)
chr7 (211-322)||(21654206-21654316)
chr7 (273-322)||(35084186-35084235)
chr7 (272-321)||(48339348-48339397)
chr7 (265-322)||(48937974-48938031)
chr7 (265-322)||(48943000-48943057)
chr7 (207-251)||(16562679-16562723)
chr7 (207-251)||(16602939-16602983)
chr7 (207-251)||(18102460-18102504)
chr7 (205-322)||(32491192-32491307)
chr7 (259-322)||(41889136-41889200)
[»] scaffold0330 (1 HSPs)
scaffold0330 (207-365)||(3087-3245)
[»] scaffold0565 (1 HSPs)
scaffold0565 (205-365)||(5959-6116)
[»] scaffold0495 (1 HSPs)
scaffold0495 (210-319)||(4550-4657)
[»] scaffold0132 (2 HSPs)
scaffold0132 (207-278)||(912-983)
scaffold0132 (207-278)||(8872-8943)
[»] scaffold0009 (1 HSPs)
scaffold0009 (205-269)||(157692-157756)
[»] scaffold0182 (1 HSPs)
scaffold0182 (220-278)||(22718-22776)
[»] scaffold1157 (1 HSPs)
scaffold1157 (207-263)||(2045-2100)
[»] scaffold0045 (1 HSPs)
scaffold0045 (207-251)||(77888-77932)


Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 9 - 368
Target Start/End: Complemental strand, 29307630 - 29307268
Alignment:
Q  9 acatcatcatatgtaaaaggagctttaaataatgtcttaatggaattagttgaccttcacttttttgaaggaagttgaccttcacttgaaataataacat 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307630 acatcatcatatgtaaaaggagctttaaataatgtcttaatggaattagttgaccttcacttttttgaaggaagttgaccttcacttgaaataataacat 29307531  T
Q  109 ggtagctacttttgtgctaccaaattaacatgatgagtttttgattttctcaaggacaataatatgctt-ctttgtcccaacttataagcnnnnnnntta 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       |||    
T  29307530 ggtagctacttttgtgctaccaaattaacatgatgagtttttgattttctcaaggacaataatatgcttcctttgtcccaacttataagcaaaaaaatta 29307431  T
Q  208 ttttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaa 307  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  29307430 ttttctttgtttcaaattataagcaaaaaagactaacttttatcatatttaattatgtttttctaaaaaattat-ttttccaaaggaaaattaaatgcaa 29307332  T
Q  308 agtgcattcaatttgc---tcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    ||||||||||||||||   |         |||||||||| ||||||||||||||||||||||||    
T  29307331 agtgcattcaatttgctttttttttttttattttctctacaatcaactaccaatgaaaattatt 29307268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 8959557 - 8959717
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||||| | | |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8959557 ttattttctttatcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaattaaatg 8959656  T
Q  305 caaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
     ||||||| ||||||||||||        |||||||||||||||||||| |||||||||||    
T  8959657 taaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaatt 8959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 207 - 364
Target Start/End: Complemental strand, 16153587 - 16153430
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||| ||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||    
T  16153587 attttgtttgtcccaaatgataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaataca 16153488  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaat 364  Q
    ||||||||| |||||||||        | |||||||||||||||||||||||||||||    
T  16153487 aagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat 16153430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 8506356 - 8506474
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  8506356 attttctttctcccaaattataagtaaaaaagatcaacttttgtcatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaattaaatgca 8506455  T
Q  307 aagtgcattcaatttgctc 325  Q
    |||||||||||||||||||    
T  8506456 aagtgcattcaatttgctc 8506474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 1144740 - 1144622
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||| ||||| | |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  1144740 ttattttttttgtcctaaattataagcaaaaaagaccaacttttatcatatttaataatgtttttc-aaaaaattatcttttccaaagaaaaattaaatg 1144642  T
Q  305 caaagtgcattcaatttgct 324  Q
    ||||||||||||||||||||    
T  1144641 caaagtgcattcaatttgct 1144622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 221 - 324
Target Start/End: Complemental strand, 10154156 - 10154053
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10154156 aaattataagcaaaaaagacaaacttttatcatatttaattatgttgtttcaaaaaattatctcttccaaagaaaaattaaatgcaaagtgcattcaatt 10154057  T
Q  321 tgct 324  Q
    ||||    
T  10154056 tgct 10154053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 365
Target Start/End: Complemental strand, 3464059 - 3463899
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaa-ttatcttttccaaagaaaaattaaatg 304  Q
    |||||| ||| | ||| |||||||| ||||||||  ||||||||||||||||||||||||||||  |||||| |||| ||||||||  ||||||||||||    
T  3464059 tattttatttatcccatattataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattattttttccaagaaaaaattaaatg 3463960  T
Q  305 caaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||| ||||||    
T  3463959 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaatt 3463899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 28906987 - 28907102
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | |||||||||||| ||||||||| |||| ||||||||||||||||||||||  |||||||||||||||| |||   |||||||||||||    
T  28906987 attttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttttcaatagaaaattaaatgca 28907086  T
Q  307 aagtgcattcaatttg 322  Q
    ||||||||||||||||    
T  28907087 aagtgcattcaatttg 28907102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 28943382 - 28943497
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | |||||||||||| ||||||||| |||| ||||||||||||||||||||||  |||||||||||||||| |||   |||||||||||||    
T  28943382 attttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttttcaatagaaaattaaatgca 28943481  T
Q  307 aagtgcattcaatttg 322  Q
    ||||||||||||||||    
T  28943482 aagtgcattcaatttg 28943497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 315
Target Start/End: Original strand, 6391786 - 6391896
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||||  |||| |||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||| ||    
T  6391786 ttatttttattgtcccaaattataagcaaaaaagactaacttttatcataattaattatgttatttcaaaaaattatcttttccaaagagaaattaattg 6391885  T
Q  305 caaagtgcatt 315  Q
    |||| ||||||    
T  6391886 caaattgcatt 6391896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 12912535 - 12912418
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||  ||||||||||| |||||||||| ||||||||| || || ||||||||||| |||| |||||||||||||||||||    
T  12912535 attttctttgtctcaaattataaa-aaaaaagactagcttttatcatgtttaattatattgtttcaaaaaattatatttttcaaagaaaaattaaatgca 12912437  T
Q  307 aagtgcattcaatttgctc 325  Q
    ||||||||| |||||||||    
T  12912436 aagtgcatttaatttgctc 12912418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 29298454 - 29298373
Alignment:
Q  85 gaccttcacttgaaataataacatggtagctacttttgtgctaccaaattaacatgatgagtttttgattttctcaaggacaata 169  Q
    |||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29298454 gaccttcacttgaaataa-aac--ggtagctacttttgtggtaccaaattaacatgatgagtttttgattttctcaaggacaata 29298373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 35275466 - 35275353
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||| | |||||| || || ||||||||||||||||||||||||| |||||||| ||||||| |||| | ||||||||||||    
T  35275466 attttctttgtcccaaattatagg-aaaaaataccaaattttatcatatttaattatgttttttcaaaaaatcatctttttcaaaaagaaattaaatgca 35275368  T
Q  307 aagtgcattcaattt 321  Q
    || | ||||||||||    
T  35275367 aactacattcaattt 35275353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 32079424 - 32079538
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||||||||||||||| ||||||||  ||||||| ||||| ||||||||||| || |||||| |  ||||||| |||   ||||||||||||    
T  32079424 attttctttgttccaaattataagcaaaaaagataaacttttgtcatacttaattatgttatttcaaaaactcgtcttttctaaactgaaattaaatgca 32079523  T
Q  307 aagtgcattcaattt 321  Q
    || |||||| |||||    
T  32079524 aattgcatttaattt 32079538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 5659766 - 5659646
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaa-gactaacttttatcatatttaattatgt--ttttccaaaaaattatcttttccaaagaaaaattaaat 303  Q
    ||||||||| | | |||||||||| |||||| ||  |||||||||||||||||||||| |  ||||  ||||| ||||||| ||||||| ||||||||||    
T  5659766 attttctttatcctaaattataagcaaaaaaagatcaacttttatcatatttaattatatatttttttaaaaagttatcttctccaaaggaaaattaaat 5659667  T
Q  304 gcaaagtgcattcaatttgct 324  Q
    | |||||||||||||||||||    
T  5659666 gtaaagtgcattcaatttgct 5659646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 323
Target Start/End: Complemental strand, 3103560 - 3103452
Alignment:
Q  214 ttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgca 313  Q
    ||||| ||||||||||  ||||||  ||||||||||||||||||||||||||  || ||||||||||| ||||  ||||| |||||||||| ||| ||||    
T  3103560 ttgtttcaaattataaaaaaaaaat-ctaacttttatcatatttaattatgtcatttcaaaaaattatattttttaaagagaaattaaatgtaaattgca 3103462  T
Q  314 ttcaatttgc 323  Q
    |||| |||||    
T  3103461 ttcattttgc 3103452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 8146236 - 8146140
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  8146236 tataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 8146140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 42273549 - 42273632
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  ||||||| |||||||||||    
T  42273549 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttaaaaaaaatcatcttttccaa 42273632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 30086786 - 30086676
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||||||||||||| |||||||||   |||  ||||||||||| |||| |||| ||||||||||| | |||||||||| ||||    
T  30086786 ttctttgtctcaaaatataagtaaaaaagaccaacttttatgtcatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatacaaa 30086689  T
Q  309 gtgcattcaattt 321  Q
     ||||||||||||    
T  30086688 ttgcattcaattt 30086676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 12638832 - 12638921
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||||||||||||||||  ||||  ||||||||||| |||| ||||||| |||| ||| | ||||||||||||||| |||||||||||||    
T  12638832 aaaaaagactaacttttatgctatt--attatgttttttcaaacaaattatttttttcaatgtaaaattaaatgcaaattgcattcaatttg 12638921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 31690836 - 31690747
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  31690836 aaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 31690747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 8225363 - 8225434
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||  |||||||  |||||||    
T  8225363 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcatatttaatcttgttttttaaaaaaat 8225434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 24439490 - 24439604
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaa--aaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||  ||||| |||||| |||||| |||||||||||    
T  24439490 attttctttgtcgcaaaatataagcaaaaaagatcaacttttatgttatt--attatgttttttcaacaaaaatcatcttt-ccaaagtaaaattaaatg 24439586  T
Q  305 caaagtgcattcaatttg 322  Q
    |||| |||||||||||||    
T  24439587 caaattgcattcaatttg 24439604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 13146650 - 13146761
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||  ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||| |||    
T  13146650 ttctttgtatcaaaatataaacaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgtaaa 13146747  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  13146748 ttgcattcaatttg 13146761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 16286324 - 16286225
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||||||||||||| |||||||||   ||||  |||||||||| |||| |||||||||||| ||| | ||||||||||||    
T  16286324 attttctttgtctcaaaatataagtaaaaaagacaaacttttatgcaattt--ttatgttttttcaaacaaattatctttttcaatgtaaaattaaatgc 16286227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 5369209 - 5369161
Alignment:
Q  271 caaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  5369209 caaaaacttatctttttcaaaggaaaattaaatgcaaagtgcattcaat 5369161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 8541780 - 8541691
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||| ||||||    
T  8541780 aaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattaaatttg 8541691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 12730248 - 12730196
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaa 259  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||| |||||||    
T  12730248 attttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaa 12730196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 35462959 - 35462846
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||  ||||||| ||| | ||||||||||||    
T  35462959 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgc 35462862  T
Q  306 aaagtgcattcaattt 321  Q
    ||| | ||||||||||    
T  35462861 aaatttcattcaattt 35462846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 2002315 - 2002260
Alignment:
Q  267 tttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||| ||||||| ||||||||||||  ||||||||||||||| |||||||||||||    
T  2002315 tttcaaaaaaatcatcttttccaaaataaaattaaatgcaaattgcattcaatttg 2002260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 25840763 - 25840846
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||| ||| |||||||||  ||||||||  |||||||  ||||||| |||||||||||    
T  25840763 attttctttgtcccaaaatataagcaaaaatgacaaacttttattctatttaatcttgttttttaaaaaaatcatcttttccaa 25840846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 37066446 - 37066350
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| |||||||||||| |||| |  ||||  ||||| ||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  37066446 tataagcaaaaaagactaatttttttgctatt--attatattttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 37066350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 30893592 - 30893534
Alignment:
Q  208 ttttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtt 266  Q
    |||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  30893592 ttttttttgtcccaaattataagtgaaaacgacaaacttttgtcatatttaattatgtt 30893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 104480 - 104419
Alignment:
Q  208 ttttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    |||||| ||| ||||| |||||||||||||||| |||||||||| ||||||||  |||||||    
T  104480 ttttctctgtcccaaaatataagtaaaaaagacaaacttttatcctatttaatcttgttttt 104419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 9957677 - 9957624
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaat 260  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||    
T  9957677 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaat 9957624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 20914777 - 20914891
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||   ||| |||||| |||||| || |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  20914777 attttctttgtcttaaaatataagcaaaaaataccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 20914874  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  20914875 aagttgcatttaatttg 20914891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 29298496 - 29298444
Alignment:
Q  17 atatgtaaaaggagctttaaataatgtcttaatggaattagttgaccttcactt 70  Q
    |||| |||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  29298496 atatataaaaggagctttaaata-tgtcttaatcgaattagtggaccttcactt 29298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 42365010 - 42365067
Alignment:
Q  265 tttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| || |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  42365010 tttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 42365067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 11262114 - 11262070
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  11262114 attttctttgtcccaaaatataagtaaaaaagacaaacttttatc 11262070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 12793068 - 12793016
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaa 259  Q
    ||||||||||||||||| |||||| |||||| || |||||||||| |||||||    
T  12793068 attttctttgttccaaaatataagcaaaaaatacaaacttttatcctatttaa 12793016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 365
Target Start/End: Complemental strand, 1144606 - 1144575
Alignment:
Q  334 attttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||||||||||||||||||||||||||    
T  1144606 attttctctataatcaactaccaatgaaaatt 1144575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 4463271 - 4463342
Alignment:
Q  219 ccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||| |||||| ||||||||| ||||||||| |||||||||  |||||||  || |||| |||||||||||    
T  4463271 ccaaaatataagaaaaaaagacaaacttttattatatttaatcttgtttttaaaagaaatcatcttttccaa 4463342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 34425230 - 34425309
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatctttt 286  Q
    ||||||||||| | ||| |||||| ||||||||| ||||||||||  |||||||| |||||||  |||||| | ||||||    
T  34425230 attttctttgtcctaaaatataagcaaaaaagacaaacttttatcccatttaattttgtttttttaaaaaaatctctttt 34425309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 39505493 - 39505411
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||  ||||||||  | |||||  |||||| ||||||||||||    
T  39505493 attttctttgtcccaaaatataagcaaaaaagacaaacttttattttatttaatcttattttt-aaaaaaaatatcttttccaa 39505411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 25962693 - 25962594
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| |||||| || |||||||||  |||||  |||||||||| |||| |||| ||||||| ||| | ||||||||||||    
T  25962693 attttctttgtctcaaaatataagcaaaaaatacaaacttttatgctattt--ttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgc 25962596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 8143852 - 8143966
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||| ||||| ||| | |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| ||||  |||||| ||||| ||||||||||      
T  8143852 attttttttgtcccataatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcttctttttcaaagtaaaattaaatat 8143949  T
Q  306 aaagtgcattcaatttg 322  Q
    ||| |||||||||||||    
T  8143950 aaattgcattcaatttg 8143966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 24432637 - 24432527
Alignment:
Q  211 tctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaag 309  Q
    |||||||  |||| |||||| |||||| || |||||||||  |||||  |||| ||||| |||| |||| ||||||||||| | ||||||||||||||      
T  24432637 tctttgtctcaaaatataagcaaaaaaaaccaacttttatactattt--ttatattttttcaaataaatcatcttttccaatgtaaaattaaatgcaagt 24432540  T
Q  310 tgcattcaatttg 322  Q
    |||||| ||||||    
T  24432539 tgcatttaatttg 24432527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 34049810 - 34049734
Alignment:
Q  245 ttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||||||||||||||| ||| || | |||||| || ||||| ||||  |||||||||||||| | ||||| ||||    
T  34049810 ttttatcatatttaattacgttctttcgaaaaatcatattttctaaagcgaaattaaatgcaaattacattcgattt 34049734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 207 - 363
Target Start/End: Complemental strand, 22479255 - 22479099
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  22479255 attttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgca 22479156  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaa 363  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  22479155 aagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaa 22479099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 2994619 - 2994461
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  2994619 attttctttgtcccaaattataagaaaaaatgacaaacttttatcgtatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgca 2994520  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  2994519 aagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 2994461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 22456209 - 22456051
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  22456209 attttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgca 22456110  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    || ||||||||||||||||        ||||||||||||||||||||||||| ||||||    
T  22456109 aaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaatt 22456051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 10251928 - 10252086
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||| |||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||    
T  10251928 attttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagca 10252027  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  10252028 aagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaatt 10252086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 21214158 - 21214316
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||  ||||||||||| |||||||||||||||| ||||| |||||||||||||||  |||||||||||||    
T  21214158 attttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttttcaaaatattatcttttccaaatgaaaattaaatgca 21214257  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        |||||||| |||||||||||||||||||||||    
T  21214258 aagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaatt 21214316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 219 - 362
Target Start/End: Original strand, 49583894 - 49584037
Alignment:
Q  219 ccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  49583894 ccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaattaaatgtaaagtgcattcaa 49583993  T
Q  319 tttgctcnnnnnnnnattttctctataatcaactaccaatgaaa 362  Q
    |||||||        ||||||||| |||||| ||| ||||||||    
T  49583994 tttgctctgtttttcattttctctgtaatcatctatcaatgaaa 49584037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 10114829 - 10114986
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||| |||||| || |||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||| |||    
T  10114829 attttctttgtctcaaattataagcaaaaaatac-aacttttatcatatttaattatgttttttcaacagattatcttttccaaaggaaaattaaaagca 10114927  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  10114928 aagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaatt 10114986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 207 - 368
Target Start/End: Original strand, 38401297 - 38401458
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||    
T  38401297 attttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaaataatcttttccaaaagaaaattaaatgca 38401396  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    |||| |||| ||||| |||        |||||||||||||| ||||||||||||||||||||    
T  38401397 aagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatt 38401458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 47444177 - 47444016
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaatta---tgtttttccaaaaaattatcttttccaaagaaaaattaaat 303  Q
    ||||||||||| |||||||||||| |||||| |  |||||||||||||||||||||   ||||||| |||||||||||||||||||||| ||||||||||    
T  47444177 attttctttgtcccaaattataagcaaaaaatatcaacttttatcatatttaattactatgttttttcaaaaaattatcttttccaaaggaaaattaaat 47444078  T
Q  304 gcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||||         ||||||||||||||||||||||| ||||||||    
T  47444077 gcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaatt 47444016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 232 - 368
Target Start/End: Original strand, 48291764 - 48291900
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnn 331  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||          
T  48291764 aaaaaagatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatggaaagtgcattcaatttgctctctttt 48291863  T
Q  332 nnattttctctataatcaactaccaatgaaaattatt 368  Q
      ||||| ||| |||||||||||||||||||||||||    
T  48291864 tcattttttctgtaatcaactaccaatgaaaattatt 48291900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 34194807 - 34194923
Alignment:
Q  209 tttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||| ||| |||||||| ||||||||| |||||||||||| |||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  34194807 tttctttgtcccagattataagcaaaaaagaccaacttttatcatttttaattatgttgtttcaaaaaattatcttttccaaaggaaaattaaatgcaaa 34194906  T
Q  309 gtgcattcaatttgctc 325  Q
    ||||||||| |||||||    
T  34194907 gtgcattcagtttgctc 34194923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 30454926 - 30454807
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaaga-ctaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||| |||||||||||| |||||| | | |||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  30454926 attttctttgtcccaaattataagcaaaaaaaaaccaacttttagcatatttaattatgttgtttcaaaaaattatcttttccaaaggaaaattaaatgc 30454827  T
Q  306 aaagtgcattcaatttgctc 325  Q
    ||||||||||||||||||||    
T  30454826 aaagtgcattcaatttgctc 30454807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 365
Target Start/End: Original strand, 10014224 - 10014344
Alignment:
Q  245 ttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctat 344  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||| |||        |||||||||||    
T  10014224 ttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctattttttattttctctat 10014323  T
Q  345 aatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||||    
T  10014324 aatcaactaccaatgaaaatt 10014344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 54725804 - 54725686
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||   ||||||||||||||||||||| ||||| |||||||||||||||| ||||  |||||||||| ||    
T  54725804 attttctttgtcccaaattataagcaaaaaagatctacttttatcatatttaattatattttttcaaaaaattatctttttcaaaagaaaattaaataca 54725705  T
Q  307 aagtgcattcaatttgctc 325  Q
    |||||||||||||||||||    
T  54725704 aagtgcattcaatttgctc 54725686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 7886808 - 7886700
Alignment:
Q  218 tccaaattataagtaaaaaag-actaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattc 316  Q
    ||||||||||||| ||||||  || ||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||| |||||||||||||||||    
T  7886808 tccaaattataagcaaaaaaataccaacttttatcatatttaattatgttgttttaaaaaatcatcttttccaaagaaaaatcaaatgcaaagtgcattc 7886709  T
Q  317 aatttgctc 325  Q
    |||||||||    
T  7886708 aatttgctc 7886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 23209481 - 23209371
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||   |||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||| |||||| ||||||| ||||||||||||    
T  23209481 attttctttgtcttaaattataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaaaaatcatctttcccaaagagaaattaaatgca 23209382  T
Q  307 aagtgcattca 317  Q
    || ||||||||    
T  23209381 aattgcattca 23209371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 6784257 - 6784348
Alignment:
Q  213 tttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  6784257 tttgtcccaaattataag-aaaaaagactaacttttatcatatttaattat-ttttttcaaaaaattatctcttccaaagaaaaattaaatgca 6784348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 368
Target Start/End: Complemental strand, 8097182 - 8097058
Alignment:
Q  244 cttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctcta 343  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||        |||||||| |    
T  8097182 cttttatcatatttaataatgttgtttcaaaaaattattttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaa 8097083  T
Q  344 taatcaactaccaatgaaaattatt 368  Q
    ||| |||  ||||||||||||||||    
T  8097082 taagcaataaccaatgaaaattatt 8097058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 353
Target Start/End: Complemental strand, 25242379 - 25242233
Alignment:
Q  208 ttttctttgttccaaattataagtaaaaaaga-ctaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||| ||||| || || ||||  | || ||||||||| |||    
T  25242379 ttttctttgttccaaattataagcaaaaaaggtcaaacttttatcatatttaattatgttttttcaaaatatcatatttttaataggaaaattaaacgca 25242280  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaacta 353  Q
    |||||||||||||||| ||        ||||||||||||||||||||    
T  25242279 aagtgcattcaatttgttctcttttttattttctctataatcaacta 25242233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 32070164 - 32070277
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | |||||||||||| ||||| ||  |||||||||||||||||| |||||  || ||||||||||| ||||| ||||||||||||||||||    
T  32070164 attttctttctcccaaattataagcaaaaa-gataaacttttatcatatttaactatgtagtttcaaaaaattattttttcaaaagaaaaattaaatgca 32070262  T
Q  307 aagtgcattcaattt 321  Q
    ||||| |||||||||    
T  32070263 aagtgtattcaattt 32070277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 29676602 - 29676531
Alignment:
Q  253 tatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgct 324  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  29676602 tatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaattcaaagtgcattcaatatgct 29676531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 12128872 - 12128753
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||||| || |||||||| || ||||| | ||| |||||||||     
T  12128872 ttatttcctttgttcaaaattataagcaaaaaagactaactttta-catatttaattatgttatttcaaaaaatcattttttctatagagaaattaaata 12128774  T
Q  305 caaagtgcattcaatttgctc 325  Q
    |||| | |||| | |||||||    
T  12128773 caaattacatttattttgctc 12128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 362
Target Start/End: Complemental strand, 7615120 - 7614967
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| | |||||||||| |||||| || || |||| ||||||||||||||||| || |||||||| ||||||| ||||| |||| ||||||||    
T  7615120 attttctttgtcctaaattataaggaaaaaa-ac-aatttttgtcatatttaattatgttatttcaaaaaatcatctttttcaaaggaaaactaaatgca 7615023  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaa 362  Q
    |  |||||||||||| | |        |||||||||| ||||||| ||||||||||    
T  7615022 acttgcattcaatttaccctctcttttattttctctacaatcaacaaccaatgaaa 7614967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 27876088 - 27876005
Alignment:
Q  234 aaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattca 317  Q
    |||||||||||||||||||||||||||||| || || ||||||||  |||||| |||||| |||||||||||||  ||||||||    
T  27876088 aaaagactaacttttatcatatttaattatattatttcaaaaaatcttctttttcaaagagaaattaaatgcaatttgcattca 27876005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 55400658 - 55400769
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||||||| ||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  55400658 ttctttgtctcaaaatataagcaaaaaagacttacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 55400755  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  55400756 ttgcattcaatttg 55400769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 17587646 - 17587746
Alignment:
Q  223 attataagtaaa-aaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||||||||| |||||  ||||||||| ||||||||||||||| ||  ||||||| |||||||  ||||||||||||| || |||||||||| |||||    
T  17587646 attataagtaaataaagatcaacttttattatatttaattatgttgttttaaaaaatcatcttttttaaagaaaaattaagtgtaaagtgcatttaattt 17587745  T
Q  322 g 322  Q
    |    
T  17587746 g 17587746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 36189209 - 36189095
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttcca--aaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||||| ||||| |||||| ||||||||| | |||||||  ||||  ||||||||||| ||  ||||||  |||||||||||| |||||||||||    
T  36189209 attttctttgt-ccaaaatataagcaaaaaagaccatcttttatgttatt--attatgttttttcacaaaaaatcttcttttccaaagtaaaattaaatg 36189113  T
Q  305 caaagtgcattcaatttg 322  Q
    |||| |||||||||||||    
T  36189112 caaattgcattcaatttg 36189095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 13541192 - 13541305
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||| ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| | || |||| ||||||||||| | ||||||||||    
T  13541192 ttatattctttgtctcaaaatataagaaaaaaagaccaacttttatgttatt--attatgttttttcgaacaaatcatcttttccaatgtaaaattaaat 13541289  T
Q  304 gcaaagtgcattcaat 319  Q
    ||||| ||||||||||    
T  13541290 gcaaattgcattcaat 13541305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 21654164 - 21654276
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt--ccaaaaaattatcttttccaaagaaaaattaaatgcaa 307  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  |||||||||||  | || |||| ||||||||||| | ||||||||||||||    
T  21654164 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 21654261  T
Q  308 agtgcattcaatttg 322  Q
    | |||||||||||||    
T  21654262 attgcattcaatttg 21654276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 50651257 - 50651174
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||||||||  |||||| ||||||||  |||||||||| ||||||||  |||||||  ||||||| |||||||||||    
T  50651257 attttctttgttccaatatataagcaaaaaagataaacttttatcctatttaatcttgtttttttaaaaaatcatcttttccaa 50651174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 1335030 - 1335141
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| || ||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | |||||||||||||||    
T  1335030 ttctttgtctcaaaatataagcaaaaaagaccaatttttatgttatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaa 1335127  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  1335128 ttgcattcaatttg 1335141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 26641312 - 26641201
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | |||||||||||||||    
T  26641312 ttctttgtctcaaaatataagcaaaaaacaccaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaaggtaaaattaaatgcaaa 26641215  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  26641214 ttgcattcaatttg 26641201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 41935539 - 41935656
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||| ||||| |||||||||||| ||||| | | ||||||||||||||||||||||||| ||  ||||||| || |||| |||||| |||| | |||||    
T  41935539 attttttttgtcccaaattataagcaaaaaggcc-aacttttatcatatttaattatgttattttaaaaaatcatatttttcaaagagaaataatatgca 41935637  T
Q  307 aagtgcattcaatttgctc 325  Q
     | |||| ||| |||||||    
T  41935638 cattgcactcattttgctc 41935656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 46580456 - 46580567
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||||||||||||| |||||||||   |||  ||||||||||| |||| |||| || |||| ||| | |||||||||||||||    
T  46580456 ttctttgtctcaaaatataagtaaaaaagaccaacttttatgccatt--attatgttttttcaaacaaatcatattttacaatgtaaaattaaatgcaaa 46580553  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  46580554 ttgcattcaatttg 46580567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 44566987 - 44566895
Alignment:
Q  208 ttttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaa 301  Q
    |||| ||||| | |||||||||  ||| ||||  ||||||||||||||||||||||||| || |||||||| |||||||| ||||| |||||||    
T  44566987 ttttttttgtcctaaattataaacaaagaagaaaaacttttatcatatttaattatgttgtt-caaaaaatcatcttttctaaagagaaattaa 44566895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 32322442 - 32322329
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| ||||||||||||||||||  ||||||  |||||  |||||||||| |||| |||||||||||| ||| | |||||||||| |    
T  32322442 attttctttgtctcaaaatataagtaaaaaagactagattttatgctattt--ttatgttttttcaaacaaattatctttttcaatgtaaaattaaatac 32322345  T
Q  306 aaagtgcattcaattt 321  Q
    ||  |||||| |||||    
T  32322344 aagttgcatttaattt 32322329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 46918350 - 46918298
Alignment:
Q  271 caaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgc 323  Q
    |||||||||||||||||||||  |||||||| |||||||||||||| ||||||    
T  46918350 caaaaaattatcttttccaaatgaaaattaagtgcaaagtgcattccatttgc 46918298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 2927192 - 2927275
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    |||||||||||   ||| |||||| ||||||||| ||||||||| |||||||||  |||||||  ||||||| |||||||||||    
T  2927192 attttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaaatcatcttttccaa 2927275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 14752428 - 14752357
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  14752428 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaat 14752357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 37074862 - 37074941
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatctttt 286  Q
    ||||||||||| || || |||||| ||||||||| |||||||||| ||||||||  |||||||| |||||| | ||||||    
T  37074862 attttctttgtcccgaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttctaaaaaaatctctttt 37074941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 16033153 - 16033071
Alignment:
Q  242 aacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgct 324  Q
    |||||||||||||||||||||| || ||   | ||||  |||||||||||| ||  || ||||||||||||||||||||||||    
T  16033153 aacttttatcatatttaattatattgttttcataaatgttcttttccaaaggaattttcaatgcaaagtgcattcaatttgct 16033071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 23513487 - 23513598
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||  ||||||| ||| | |||||||||||||||    
T  23513487 ttctttgtctcaaaatataagcaaaaaataccaacttttatgctatt--attatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgcaaa 23513584  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  23513585 ttgcattcaatttg 23513598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 31126132 - 31126243
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||  ||||||||| |||||||||   |||  ||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  31126132 ttctttgtctcaaaatataaacaaaaaagaccaacttttatgccatt--attatgttttttcaaacaaatcattttttccaatgtaaaattaaatgcaaa 31126229  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  31126230 ttgcattcaatttg 31126243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 53020112 - 53020214
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgttttt--ccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattca 317  Q
    |||| ||||||||||||| || |||||||||  ||||  |||||||||||  | || |||| ||||||| ||| | ||||||||||||||| ||||||||    
T  53020112 caaaatataagtaaaaaataccaacttttatgctatt--attatgtttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattca 53020209  T
Q  318 atttg 322  Q
    |||||    
T  53020210 atttg 53020214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 37324230 - 37324173
Alignment:
Q  265 tttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| || |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  37324230 tttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 37324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 45781314 - 45781428
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | |||||||||| |    
T  45781314 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaattc 45781411  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  45781412 aagttgcatttaatttg 45781428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 46819966 - 46820080
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| ||||| |||||||||  |||||||||  |||||  ||||||||||  ||| |||| ||||||||||| | ||||||||||||    
T  46819966 attttctttgtctcaaaatataaataaaaaagatcaacttttatgctattt--ttatgtttttttaaacaaatcatcttttccaatgtaaaattaaatgc 46820063  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  46820064 aagttgcatttaatttg 46820080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 51255103 - 51255217
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||  |||| |||||||||||||||  |||||||||     ||| |||||||||| |||| |||| |||||||||||   ||||||||||    
T  51255103 ttattttctttgtctcaaaatataagtaaaaaagatcaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatctaaaattaaat 51255198  T
Q  304 gcaaagtgcattcaatttg 322  Q
    ||||  |||||| ||||||    
T  51255199 gcaagttgcatttaatttg 51255217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 28793076 - 28793193
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaag-aaaaattaaa 302  Q
    ||||||| |||||  |||| |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| |||||||| || | ||||||||||    
T  28793076 ttattttatttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttctaatgtaaaaattaaa 28793173  T
Q  303 tgcaaagtgcattcaatttg 322  Q
    |||||  |||||| ||||||    
T  28793174 tgcaagttgcatttaatttg 28793193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 6752569 - 6752624
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaat 260  Q
    ||||||||||||| | ||| | |||||||||||||| |||||||||| ||||||||    
T  6752569 ttattttctttgtcctaaaatttaagtaaaaaagacaaacttttatcctatttaat 6752624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 29676931 - 29676885
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcata 254  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  29676931 attttctttgtcccaaattataagtaaaaaagac-aacttatatcata 29676885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 33974779 - 33974708
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    |||||||||||  |||| |||||| ||||||||| ||||||| |||||||||||  |||||||  |||||||    
T  33974779 attttctttgtctcaaaatataagcaaaaaagacaaacttttttcatatttaatcttgttttttgaaaaaat 33974708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 16739358 - 16739263
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||| ||||| |||| |||| ||||||||||| | ||||||||||    
T  16739358 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcatcttttccaatgtaaaattaaat 16739263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 43575888 - 43575987
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    |||| |||||| ||||||||  |||||||||  |||||  ||||||||||| || |||| |||||||| || | ||||||||||||||  |||||| |||    
T  43575888 caaaatataagcaaaaaagatcaacttttatgctattt--ttatgtttttcaaacaaatcatcttttctaatgtaaaattaaatgcaagttgcatttaat 43575985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 46303525 - 46303575
Alignment:
Q  272 aaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||||  ||||||| |||||||||||||||||||| |||||| ||||||    
T  46303525 aaaaaatagtcttttctaaagaaaaattaaatgcaaattgcatttaatttg 46303575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 579356 - 579315
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaatt 261  Q
    |||| |||||||||||||||| |||||||||| |||||||||    
T  579356 caaaatataagtaaaaaagacaaacttttatcctatttaatt 579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 7866703 - 7866650
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaat 260  Q
    ||||||||||| ||||| |||||  ||||||||| |||||||||| ||||||||    
T  7866703 attttctttgtcccaaaatataaacaaaaaagacaaacttttatcctatttaat 7866650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 20847492 - 20847439
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaat 260  Q
    ||||||||||| |||||||||||||||||||||  |||| ||| | ||||||||    
T  20847492 attttctttgtcccaaattataagtaaaaaagataaactattaccttatttaat 20847439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 49068018 - 49068079
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    ||||||||||| |||| |||| ||||||| ||| | ||||||||||||||| ||||||||||    
T  49068018 attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaat 49068079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 51311574 - 51311646
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    |||||||| |||| ||||| |||||||||||||||| || ||||||| ||||||||  |||||||  |||||||    
T  51311574 ttattttcattgt-ccaaaatataagtaaaaaagacaaatttttatcctatttaatcttgttttttaaaaaaat 51311646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 11054497 - 11054453
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  11054497 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 11054453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 51309396 - 51309444
Alignment:
Q  274 aaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||| |||||||| |||  ||||||||||||||| |||||||||||||    
T  51309396 aaaataatcttttctaaattaaaattaaatgcaaattgcattcaatttg 51309444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 6e-56; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 23978350 - 23978192
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | ||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23978350 attttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaattaaatgca 23978251  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  23978250 aagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 23978192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 37911801 - 37911959
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  37911801 attttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttttcaaaatattatcttttccaaaggaaaattaaatgca 37911900  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||| |||||||||        ||||||||||||||||||||||||||||||||    
T  37911901 aagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaatt 37911959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 28318652 - 28318494
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |    
T  28318652 attttctttgtcccaaattgtaagcaaaaaaaactaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgta 28318553  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    || |||||||||||| ||         ||||||||||||||||||||||||||||||||    
T  28318552 aaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaatt 28318494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 28142857 - 28142699
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagact-aacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||||||||||||||| |||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  28142857 attttctttgttccaaattataagcaaaaaaaaatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgc 28142758  T
Q  306 aaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||  ||||| |||||||||        ||||||||||||||||||||||||||||||||    
T  28142757 aaa-agcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 28142699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 8013324 - 8013214
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  8013324 attttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattttttcaaaaaattatcttttccaagtaaaaattaaatgca 8013225  T
Q  307 aagtgcattca 317  Q
    |  ||||||||    
T  8013224 atttgcattca 8013214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 47516426 - 47516268
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||| | ||||||||||||| || |||||||||||||||||||||| |||||||||| ||    
T  47516426 attttctttgtcccaaattataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaaaaattatcttttccaaaggaaaattaaataca 47516327  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||  ||||||||        |||||||| |||| |||| |||||||||||||    
T  47516326 aagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaatt 47516268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 53848387 - 53848501
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaag 309  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||||||||| || || |||||||| ||||||| |||||||||| |||||||||||    
T  53848387 ttctttgtcccaaattataagtaaaaaagaccaacttttatcaaatttaattatattgtttcaaaaaatcatctttttcaaagaaaaaataaatgcaaag 53848486  T
Q  310 tgcattcaatttgct 324  Q
    |||||||||||||||    
T  53848487 tgcattcaatttgct 53848501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 46070756 - 46070641
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaa-gactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||| |||||||||||| |||||| ||| || |||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||    
T  46070756 attttctttgtcccaaattataagcaaaaaaagaccaatttttatcatatttaattatgttgtttgaaaaaattatcttttccaaaggaaaattaaatgc 46070657  T
Q  306 aaagtgcattcaattt 321  Q
    ||||||||||||||||    
T  46070656 aaagtgcattcaattt 46070641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 5842014 - 5841896
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||   ||||||||||||||||||| |||||||||||||||||| |||| || || ||||||||||||||||| ||||||||||| ||||||    
T  5842014 attttctttgtctaaaattataagtaaaaaagattaacttttatcatatttagttatattgtttcaaaaaattatcttttctaaagaaaaattcaatgca 5841915  T
Q  307 aagtgcattcaatttgctc 325  Q
    ||||||| |||||||||||    
T  5841914 aagtgcaatcaatttgctc 5841896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 40411016 - 40411176
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||||||||||||||||||||||  |||||| || ||||||||||||||||||||| ||||||  |||||| ||||||||  |||| |||||||||||    
T  40411016 ttattttctttgttccaaattataaacaaaaaaaaccaacttttatcatatttaattaagtttttttaaaaaaatatcttttttaaagtaaaattaaatg 40411115  T
Q  305 caaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
     ||| ||||||||||||| ||        ||||||||| ||||||||||||||| ||||||    
T  40411116 taaactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaatt 40411176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 8178473 - 8178356
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||| ||||||||| |||||||||||||||||||||| || || ||||||||||| ||||| |||  |||||||||||||    
T  8178473 attttctttgtctcaaattataag-aaaaaagaccaacttttatcatatttaattatattgtttcaaaaaattatattttctaaaagaaaattaaatgca 8178375  T
Q  307 aagtgcattcaatttgctc 325  Q
    |||||||||||||||||||    
T  8178374 aagtgcattcaatttgctc 8178356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 49080170 - 49080332
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaatta--tcttttccaaagaaaaattaaa 302  Q
    ||||||||| ||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||  |||||| |   | |||| ||||| |||||||||    
T  49080170 ttattttctctgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattgttatttttcaaaggaaaattaaa 49080269  T
Q  303 tgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||| ||        |||||| || ||||||||||||||||||||||    
T  49080270 tgcaaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaatt 49080332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 233 - 368
Target Start/End: Original strand, 32410271 - 32410406
Alignment:
Q  233 aaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnn 332  Q
    |||||||  |||||||||| ||||||||||| ||||| ||||| ||||  |||||||||| |||||||||||||||||| |||||||||||||           
T  32410271 aaaaagatcaacttttatcgtatttaattatattttttcaaaatattactttttccaaaggaaaattaaatgcaaagtgtattcaatttgctctcttttt 32410370  T
Q  333 nattttctctataatcaactaccaatgaaaattatt 368  Q
     |||||||||||||| ||||| ||||||||||||||    
T  32410371 tattttctctataattaactagcaatgaaaattatt 32410406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 40553687 - 40553796
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||| | ||||| ||| ||| ||||||||||||||||||||| ||  ||||||| |||||||||||||| ||||||||||||    
T  40553687 attttctttgtcccaaattatatgcaaaaa-gaccaacatttatcatatttaattatgttatttaaaaaaatcatcttttccaaagagaaattaaatgca 40553785  T
Q  307 aagtgcattca 317  Q
    || ||||||||    
T  40553786 aattgcattca 40553796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 29180616 - 29180505
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||||||||||||||| | |||||||||||||||    
T  29180616 ttctttgtctcaaaatataagcaaaaaagacaaacttttatgttatt--attatgttttttcaaagaaattatcttttccaatgtaaaattaaatgcaaa 29180519  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  29180518 ttgcattcaatttg 29180505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 29511362 - 29511446
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaag 292  Q
    |||||||||||||| |||||||||| |||||| || |||||||||||||||| ||||||||||| |||||||||||||||| |||||    
T  29511362 tattttctttgttc-aaattataagcaaaaaatacaaacttttatcatattt-attatgttttttcaaaaaattatcttttgcaaag 29511446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 5064821 - 5064732
Alignment:
Q  276 aattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||        ||||||||||||||||||||| ||||||||||    
T  5064821 aattatctttttcaaaggaaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaatt 5064732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 30776678 - 30776577
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||||||||||||||| | ||||||||||||||| |||||||||    
T  30776678 caaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaa 30776581  T
Q  319 tttg 322  Q
    ||||    
T  30776580 tttg 30776577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 30777413 - 30777514
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||||||||||||||| | ||||||||||||||| |||||||||    
T  30777413 caaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaattatcttttccaatgtaaaattaaatgcaaattgcattcaa 30777510  T
Q  319 tttg 322  Q
    ||||    
T  30777511 tttg 30777514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 32012534 - 32012421
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | ||||||||||||    
T  32012534 attttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgc 32012437  T
Q  306 aaagtgcattcaattt 321  Q
    ||| ||||||||||||    
T  32012436 aaattgcattcaattt 32012421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 38940782 - 38940895
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  38940782 attttctttgtctcaaaatataagcaaaaaataccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 38940879  T
Q  306 aaagtgcattcaattt 321  Q
    ||| ||||||||||||    
T  38940880 aaattgcattcaattt 38940895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 39970193 - 39970082
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||||||||| ||||||  ||||  ||||||||||| |||  |||| ||||||||||| | |||||||||||||||    
T  39970193 ttctttgtctcaaaatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaccaaatcatcttttccaatgtaaaattaaatgcaaa 39970096  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  39970095 ttgcattcaatttg 39970082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 52712979 - 52713090
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||||||||||||| || ||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  52712979 ttctttgtctcaaaatataagtaaaaaagaccaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 52713076  T
Q  309 gtgcattcaatttg 322  Q
     |||||| ||||||    
T  52713077 ttgcatttaatttg 52713090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 53677683 - 53677572
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  53677683 ttctttgtctcaaaatataagcaaaaaaaaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 53677586  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  53677585 ttgcattcaatttg 53677572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 37788364 - 37788478
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||| |  |||| |||||||||||||||| |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  37788364 attttctttatctcaaaatataagtaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 37788461  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  37788462 aacttgcatttaatttg 37788478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 50768358 - 50768472
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  50768358 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 50768455  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  50768456 aagttgcatttaatttg 50768472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 17187036 - 17186965
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| |||||||| ||||||||  |||||||    
T  17187036 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcatgttttttaaaaaaat 17186965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 30012160 - 30012045
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatctt--ttccaaagaaaaattaaatg 304  Q
    ||||||||||| ||||| |||||| ||||||||  |||||||||  ||||  |||||||||||  ||||||  ||| |  |||||||| |||||||||||    
T  30012160 attttctttgtcccaaaatataagcaaaaaagatcaacttttattctatt--attatgttttttaaaaaaaaaatcatctttccaaagtaaaattaaatg 30012063  T
Q  305 caaagtgcattcaatttg 322  Q
    |||| |||||||||||||    
T  30012062 caaattgcattcaatttg 30012045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 10591685 - 10591598
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||||||| ||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||    
T  10591685 aaaaaagactaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatt 10591598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 55937910 - 55937811
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||   ||| |||||| ||||||||| ||||||||| ||||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  55937910 attttctttgtcttaaaatataagcaaaaaagaccaacttttatgatattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 55937813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 4512954 - 4513003
Alignment:
Q  213 tttgttccaaattataagtaaaaaagactaacttttatcatatttaatta 262  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  4512954 tttgtcccaaattataagcaaaaaagaccaacttttatcatatttaatta 4513003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 29899628 - 29899742
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||| |||||| |||  |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  29899628 attttgtttgtttcaacatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 29899725  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  29899726 aagttgcatttaatttg 29899742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 8018308 - 8018352
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatg 264  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  8018308 caaattataagtaaaaatgactaatttttatcatatttaattatg 8018352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 39078055 - 39078107
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaa 259  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||| |||||||    
T  39078055 attttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaa 39078107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 43980429 - 43980522
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    ||||||||||||| || |||||||||  ||||  ||||| ||||| |||| |||| ||||||||||| | ||||||||||||||| ||||||||||    
T  43980429 tataagtaaaaaataccaacttttatgctatt--attatattttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaat 43980522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 47807158 - 47807222
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  47807158 attatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 47807222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 3043371 - 3043263
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| ||||||  |||||||  |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  3043371 ttctttgtctcaaaatataagcgaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 3043274  T
Q  309 gtgcattcaat 319  Q
     ||||||||||    
T  3043273 ttgcattcaat 3043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 5222505 - 5222386
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaa------ttatcttttccaaagaaaaatta 300  Q
    ||||||||||| | ||| |||||||||||||||| |||||||||  ||||  |||||||||||  ||||||      | || |||||||||| |||||||    
T  5222505 attttctttgtcctaaaatataagtaaaaaagaccaacttttatactatt--attatgtttttttaaaaaaaaaaaatcattttttccaaagtaaaatta 5222408  T
Q  301 aatgcaaagtgcattcaatttg 322  Q
    |||||||| |||||| ||||||    
T  5222407 aatgcaaattgcattgaatttg 5222386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 21181166 - 21181111
Alignment:
Q  211 tctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtt 266  Q
    ||||||| ||||||||||| |||||||||| || ||||||| ||||||||||||||    
T  21181166 tctttgtcccaaattataaataaaaaagacaaatttttatcctatttaattatgtt 21181111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 42915427 - 42915509
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||| |||||||||  |||||||  ||||||| || ||||||||    
T  42915427 attttctttgtcccaaaatataagcaaaaaagacaaacttttattatatttaatcttgttttt-aaaaaaatcatattttccaa 42915509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 38187933 - 38187819
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||| |  |||| |||||||||||||||  |||||||||  ||||  | ||||| ||| |||| |||| ||||||||||| | ||||||||||||    
T  38187933 attttctttatctcaaaatataagtaaaaaagatcaacttttatgctatt--agtatgtattttcaaacaaatcatcttttccaatgtaaaattaaatgc 38187836  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  38187835 aagttgcattcaatttg 38187819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 9798264 - 9798171
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| || |||||||    
T  9798264 tataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattggattcaat 9798171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 41414832 - 41414788
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  41414832 attttctttgtcccaaaatataagtaaaaaagacaaacttttatc 41414788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 49901990 - 49902054
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| |||| |||||||||||   ||||||||||||||| |||||||||||||    
T  49901990 attatgttttttcaaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaatttg 49902054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 16605089 - 16605018
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||  ||||||||  |||||||  |||||||    
T  16605089 attttctttgtcccaaaatataagcaaaaaagacaaacttttatgctatttaatattgtttttttaaaaaat 16605018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 35310997 - 35310918
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatctttt 286  Q
    |||||||||||   ||| |||||| ||||||||| ||||||||| |||||||||  |||||||  ||||||| |||||||    
T  35310997 attttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatctttt 35310918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 35529569 - 35529652
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||  ||||||||  |||||||   ||||| | ||||||||||    
T  35529569 attttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttttttaaaaaatctcttttccaa 35529652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 48793880 - 48793798
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| | ||||||| |||||||||  ||||||||  |||||||  ||||||| |||||||||||    
T  48793880 attttctttgtcccaaaatataagcataaaagacaaacttttattctatttaatcttgttttt-taaaaaatcatcttttccaa 48793798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 51495112 - 51495175
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||||||||  ||| |||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  51495112 attatgtttttttaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 51495175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 8683540 - 8683475
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    |||||| ||||||||| |||||||||  ||||||||  |||||||  ||||||| |||||||||||    
T  8683540 tataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaaatcatcttttccaa 8683475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 2229176 - 2229220
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  2229176 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 2229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 14332688 - 14332732
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  14332688 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 14332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 207 - 368
Target Start/End: Original strand, 32010021 - 32010182
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||    
T  32010021 attttctttgttccaaattataagtaaaaaagatcaacttttatcatatttaattatattttttcaaaaaattatctttttcaaaggaaaattaaatgca 32010120  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    ||||||||| |||||||||        |||||||||||||||||||||||||||||||||||    
T  32010121 aagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatt 32010182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 26998236 - 26998394
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| | |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  26998236 attttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatattttttcaaaaaattatcttttccaaaggaaaattaaatgca 26998335  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26998336 aagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 26998394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 38070915 - 38071072
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |    
T  38070915 attttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgta 38071014  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  38071015 aagtgcattcaatttgctc-tattttcattttctctataatcaactaccaatgaaaatt 38071072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 209 - 365
Target Start/End: Original strand, 32273592 - 32273748
Alignment:
Q  209 tttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||| | |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||    
T  32273592 tttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatattttccaaaggaaaattaaatgtaaa 32273691  T
Q  309 gtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  32273692 gtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 32273748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 219 - 361
Target Start/End: Original strand, 20380054 - 20380196
Alignment:
Q  219 ccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  20380054 ccaaattataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaaatattatcttttccaaaggaaaattaaatgcaaagtgcattcaa 20380153  T
Q  319 tttgctcnnnnnnnnattttctctataatcaactaccaatgaa 361  Q
    |||||||        ||||||||||||||||||||||||||||    
T  20380154 tttgctctcgttttcattttctctataatcaactaccaatgaa 20380196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 8032912 - 8032792
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||||||| |||||||||||||||||||  |  |||||||||||||||||||||||| ||  ||||||||||||||| |||||||||||||||||    
T  8032912 ttattttctttgtcccaaattataagtaaaaaatgcatacttttatcatatttaattatgttgttttaaaaaattatctttttcaaagaaaaattaaatg 8032813  T
Q  305 caaagtgcattcaatttgctc 325  Q
    |||| ||||||||||||||||    
T  8032812 caaaatgcattcaatttgctc 8032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 9709433 - 9709547
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||    
T  9709433 attttctttgtcccaaattataataaaaaaagactaacttttatcatatttaattatgttgtttcaaaaaattatctttaccaaagaaaaatt-aatgca 9709531  T
Q  307 aagtgcattcaatttg 322  Q
    || |||||||||||||    
T  9709532 aattgcattcaatttg 9709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 365
Target Start/End: Complemental strand, 4891866 - 4891722
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||||| |||||| |  |||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| ||||||||||||||     
T  4891866 aaattataagcaaaaaatatcaacttttatcatatttaattatgttttttcaaaaaattatatttttcaaaggaaaattaaatgtaaagtgcattcaatc 4891767  T
Q  321 tgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||        ||||||| ||||||||||||||||| ||||||    
T  4891766 tgctctctttttcattttctttataatcaactaccaataaaaatt 4891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 11031151 - 11031046
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||  |||||||| || ||||||||  ||||||||||||||||||||||||||    
T  11031151 caaattataagtaaaaaagatcaacttttatcatatttaattatgttgttttaaaaaattgtcatttccaaaagaaaattaaatgcaaagtgcattcaat 11031052  T
Q  320 ttgctc 325  Q
    ||||||    
T  11031051 ttgctc 11031046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 44442052 - 44442208
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaa-aattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||| |||||||||||| ||||| ||  |||||||||  |||||||||||||||||  |||| |||||||||||| |||| ||||||||||||    
T  44442052 attttctttgtcccaaattataaggaaaaa-gagcaacttttat--tatttaattatgttttttgaaaaaaattatcttttctaaaggaaaattaaatgc 44442148  T
Q  306 aaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||         |||||||||||||||||||| |||||||||||    
T  44442149 aaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaatt 44442208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 16179930 - 16179823
Alignment:
Q  218 tccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattca 317  Q
    ||||||||||||||||||||||| || |||||||||||||||| || || || ||||||||||| |||||||||| ||||||||||| |||||||||| |    
T  16179930 tccaaattataagtaaaaaagaccaatttttatcatatttaatgatattgtttcaaaaaattattttttccaaaggaaaattaaatgtaaagtgcattga 16179831  T
Q  318 atttgctc 325  Q
    | ||||||    
T  16179830 aattgctc 16179823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 921782 - 921677
Alignment:
Q  213 tttgttccaaattataagtaaaaaagactaactttt-atcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtg 311  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||| || ||||| ||| | |||||||||||||  ||    
T  921782 tttgttccaaattataaggcaaaaagactaactttttatcatatttaattatgttttttcaaaaaataatattttctaaaaagaaattaaatgcaatatg 921683  T
Q  312 cattca 317  Q
    ||||||    
T  921682 cattca 921677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 33933146 - 33933042
Alignment:
Q  222 aattataagtaaaaaagactaacttttatcatatttaattatgtt-tttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    ||||||||| |||||||| ||| |||||| ||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||| ||  |||||||| ||    
T  33933146 aattataagaaaaaaagattaatttttattatatttaattacgttatttcaaaaaaatcatcttttccaaagaaaaattaaatgtaagttgcattcattt 33933047  T
Q  321 tgctc 325  Q
    |||||    
T  33933046 tgctc 33933042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 792593 - 792482
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  792593 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaa 792496  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  792495 ttgcattcaatttg 792482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 21539673 - 21539787
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  21539673 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 21539770  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  21539771 aagttgcattcaatttg 21539787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 318
Target Start/End: Complemental strand, 15858847 - 15858740
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||||||||||||| || ||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  15858847 ttctttgtctcaaaatataagtaaaaaagaccaaattttatgctatt--attatgttttttcaaataaatcatcttttccaatgtaaaattaaatgcaaa 15858750  T
Q  309 gtgcattcaa 318  Q
     |||||||||    
T  15858749 ttgcattcaa 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 322
Target Start/End: Complemental strand, 14565616 - 14565499
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt--ccaaaaaattatcttttccaaagaaaaattaaa 302  Q
    |||| ||||||||  |||| |||||| |||||||||||||||||||  ||||  |||||||||||  | || |||| ||||||||||| | |||||||||    
T  14565616 ttatattctttgtctcaaaatataagcaaaaaagactaacttttatgctatt--attatgtttttttcaaagaaatcatcttttccaatgtaaaattaaa 14565519  T
Q  303 tgcaaagtgcattcaatttg 322  Q
    |||||| |||||| ||||||    
T  14565518 tgcaaattgcatttaatttg 14565499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 38549883 - 38549769
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  38549883 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcatcttttccaatgtaaaattaaatgc 38549786  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  38549785 aagttgcattcaatttg 38549769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 8784314 - 8784422
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtt-tttccaaaaaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||||||||||||| |||||||||  ||||  |||||||| |||| || |||| ||||||| ||| | |||||||||||||||    
T  8784314 ttctttgtctcaaaatataagtaaaaaagaccaacttttatgctatt--attatgttatttcaaacaaatcatctttttcaatgtaaaattaaatgcaaa 8784411  T
Q  309 gtgcattcaat 319  Q
     ||||||||||    
T  8784412 ttgcattcaat 8784422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 28424188 - 28424304
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||| ||||||||  |||| | |||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||    
T  28424188 ttatattctttgtctcaaaatttaagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 28424285  T
Q  304 gcaaagtgcattcaatttg 322  Q
    ||||| || ||||||||||    
T  28424286 gcaaattgtattcaatttg 28424304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 29514256 - 29514145
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| |||||||  || | |||||||||||||||    
T  29514256 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttttaatgtaaaattaaatgcaaa 29514159  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  29514158 ttgcattcaatttg 29514145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 22162253 - 22162347
Alignment:
Q  225 tataagtaaaaaagact-aacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    |||||| |||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| ||||||||||    
T  22162253 tataagcaaaaaagacttaacttttatgctatt--attatgttttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaat 22162347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 33635252 - 33635366
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| |||||||| || | ||||||||||||    
T  33635252 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttctaatgtaaaattaaatgc 33635349  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  33635350 aagttgcatttaatttg 33635366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 15068717 - 15068765
Alignment:
Q  274 aaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  15068717 aaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaatttg 15068765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 43075679 - 43075780
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| |||| |||||| | ||||||||||||||| |||||||||    
T  43075679 caaaatataagcaaaaaataccaacttttatgctatt--attatgttttttcaaacaaatcatctattccaatgtaaaattaaatgcaaattgcattcaa 43075776  T
Q  319 tttg 322  Q
    ||||    
T  43075777 tttg 43075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 19263999 - 19264070
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  19263999 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaat 19264070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 28492434 - 28492546
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||   ||| |||||| ||||||||| |||||||||  ||||  ||||| ||||| |||| |||| || |||||||| | ||||||||||    
T  28492434 ttattttctttgtcttaaaatataagcaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcattttttccaatgtaaaattaaat 28492531  T
Q  304 gcaaagtgcattcaa 318  Q
    ||||| |||||||||    
T  28492532 gcaaattgcattcaa 28492546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 29524301 - 29524219
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||  ||||||||  |||||||  ||||||| || ||||||||    
T  29524301 attttctttgtcccaaaatataagtaaaaaagacaaacttttattctatttaatattgttttt-aaaaaaatcatattttccaa 29524219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 44545400 - 44545499
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||||| ||||||||||||||||| || |||||||||  |||  ||| || || || |||||||| || |||||||||   ||||||||||||    
T  44545400 attttctttgttcaaaattataagtaaaaaaaaccaacttttattctatggaatgatattgtttcaaaaaatcatattttccaaaatgaaattaaatgca 44545499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 44803828 - 44803928
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    |||| |||||||||||||||  |||||||||  ||||  ||||| |||||  || |||| ||||||||||| | |||||||||| |||| ||||||||||    
T  44803828 caaaatataagtaaaaaagataaacttttatgttatt--attatattttttaaataaatcatcttttccaatgtaaaattaaatacaaattgcattcaat 44803925  T
Q  320 ttg 322  Q
    |||    
T  44803926 ttg 44803928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 321
Target Start/End: Complemental strand, 4033917 - 4033802
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||  |||| |||||| ||||||||  || ||||||  ||||  ||||||||||| |||| |||  ||||||| ||| | ||||||||||    
T  4033917 ttattttctttgtctcaaaatataagcaaaaaagatcaatttttatgctatt--attatgttttttcaaacaaaacatctttttcaatgtaaaattaaat 4033820  T
Q  304 gcaaagtgcattcaattt 321  Q
    ||||| ||||||||||||    
T  4033819 gcaaattgcattcaattt 4033802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 13822946 - 13822896
Alignment:
Q  272 aaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||| ||||||| ||||| ||||||||||||||| |||||||||||||    
T  13822946 aaaaaataatctttttcaaagtaaaattaaatgcaaattgcattcaatttg 13822896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 29514711 - 29514601
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| |||||| |||| | ||||||||||| |||    
T  29514711 ttctttgtctcaaaatataag-aaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatctttcccaatgtaaaattaaatgtaaa 29514615  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  29514614 ttgcattcaatttg 29514601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 9294636 - 9294685
Alignment:
Q  273 aaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||||||| ||||| ||||||||||||||| |||||||||||||    
T  9294636 aaaaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttg 9294685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 5091769 - 5091666
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgttttt---ccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattc 316  Q
    |||| |||||||||||||||| |||||||||   |||  |||||||||||   | || |||| ||||||| ||| | ||||||||||||||| |||||||    
T  5091769 caaaatataagtaaaaaagaccaacttttatgccatt--attatgttttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattc 5091672  T
Q  317 aatttg 322  Q
    ||||||    
T  5091671 aatttg 5091666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 5280743 - 5280679
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||||||| ||||| |||||| ||||||||| || ||||||| ||||||||  |||||||    
T  5280743 ttattttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatttaatcttgttttt 5280679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 35832326 - 35832439
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||| ||||||||  |||| |||||| |||||||||  | ||||||  ||||  ||||||||||| |||| |||| |||||||||||   ||||||||||    
T  35832326 ttatattctttgtctcaaaatataagcaaaaaagacatatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatataaaattaaat 35832423  T
Q  304 gcaaagtgcattcaat 319  Q
    ||||| ||||||||||    
T  35832424 gcaaattgcattcaat 35832439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 8701526 - 8701584
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||| ||||||||| |||||||||  |||||||  ||||||| |||||||||||    
T  8701526 aaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatcttttccaa 8701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 33198895 - 33198833
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||||| ||||| |||||| ||||||||| || ||||||| ||||||||  |||||||    
T  33198895 attttctttgtcccaaaatataagcaaaaaagacaaaattttatcctatttaatcttgttttt 33198833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 45660262 - 45660315
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaat 260  Q
    ||||||||||| ||||| |||||| |||||| || |||||||||| ||||||||    
T  45660262 attttctttgtcccaaaatataagcaaaaaaaacaaacttttatcctatttaat 45660315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 6110430 - 6110386
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  6110430 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6110386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 11616925 - 11616985
Alignment:
Q  209 tttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||| | ||| |||||||||||||||  |||||||||| ||||||||  |||||||    
T  11616925 tttctttgtcctaaaatataagtaaaaaagataaacttttatcctatttaatcttgttttt 11616985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 25571944 - 25572028
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatg-tttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| |||||| || |||||||||  ||||||||  || |||||  ||||||| |||||||||||    
T  25571944 attttctttgtcccaaaatataagcaaaaaaaacaaacttttattctatttaatcttgttttttaaaaaaaatcatcttttccaa 25572028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 28678871 - 28678828
Alignment:
Q  222 aattataagtaaaaaagactaacttttatcatatttaattatgtt 266  Q
    ||||||||||||||||||| || |||||||| |||||||||||||    
T  28678871 aattataagtaaaaaagac-aaattttatcacatttaattatgtt 28678828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 206 - 368
Target Start/End: Original strand, 4987859 - 4988021
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||  ||||||||||||||| ||||| ||||||||||||    
T  4987859 tattttctttgtcccaaattataaataaaaaagactaacttttatcatattcaaatatgtttttttaaaaaattatctttttcaaaggaaaattaaatgc 4987958  T
Q  306 aaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    ||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  4987959 aaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatt 4988021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 3888344 - 3888502
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  3888344 attttctttattctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatctttttcaaaggaaaattaaatgca 3888443  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||| ||        |||||||||||||||||||||| |||||||||    
T  3888444 aagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaatt 3888502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 4031904 - 4032062
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| |  ||||||||||| | ||||||| |||||| ||||||||||||||||||||| | ||||||||||||||| || | |||||||||||||    
T  4031904 attttctttatctcaaattataagcataaaagaccaactttaatcatatttaattatgttttttcgaaaaattatcttttcaaagggaaaattaaatgca 4032003  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  4032004 aagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 4032062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 5300834 - 5300717
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||| ||    
T  5300834 attttctttgtcccaaattataagcaaaaa-gatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaagaaaattaaataca 5300736  T
Q  307 aagtgcattcaatttgctc 325  Q
    |||||||||||||||||||    
T  5300735 aagtgcattcaatttgctc 5300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 253 - 365
Target Start/End: Original strand, 16524343 - 16524454
Alignment:
Q  253 tatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaact 352  Q
    ||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||        |||||||||||||||||||    
T  16524343 tatttaattatgttttttcaaaaaattattttttccaaaagaaaattaaatgcaaagtgcattcaatttgttc-tcttttcattttctctataatcaact 16524441  T
Q  353 accaatgaaaatt 365  Q
    |||||||||||||    
T  16524442 accaatgaaaatt 16524454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 221 - 323
Target Start/End: Original strand, 15830626 - 15830728
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||  ||||||||||| || |||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||||| |||||||||||||||    
T  15830626 aaattattggtaaaaaagacaaatttttatcatatttaattacgttttttcaaaaaattattttttccaaaggaatattaaatgtaaagtgcattcaatt 15830725  T
Q  321 tgc 323  Q
    |||    
T  15830726 tgc 15830728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 5822263 - 5822162
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgt-ttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||| ||| |||||||||||  |||||||||||| ||||||||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||||    
T  5822263 attttctctgtcccaaattataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttccaaagagaaattaaatgc 5822164  T
Q  306 aa 307  Q
    ||    
T  5822163 aa 5822162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 1130436 - 1130520
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaa 291  Q
    ||||||||||| |||||||||||| |||||| || ||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  1130436 attttctttgtcccaaattataagcaaaaaaaaccaacttttatcatatttaattacgttgtttcaaaaaattatcttttccaaa 1130520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 5881994 - 5881894
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||| ||| |||||||||||  ||||| |||||| |||||||||||||||||||||||||  ||||||| |||||||||||||| | ||||||||||    
T  5881994 attttctctgtcccaaattataaacaaaaatgactaatttttatcatatttaattatgtttttaaaaaaaatcatcttttccaaagagagattaaatgca 5881895  T
Q  307 a 307  Q
    |    
T  5881894 a 5881894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 30949049 - 30949165
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||  |||| |||||| |||||||||||||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||    
T  30949049 ttattttctttgtctcaaaatataagcaaaaaagactaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 30949146  T
Q  304 gcaaagtgcattcaatttg 322  Q
    ||||  |||||| ||||||    
T  30949147 gcaagttgcatttaatttg 30949165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 10227831 - 10227939
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  |||||||||||||||| |||| |||||||||||   |||||||||||||||    
T  10227831 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgtttttccaaacaaatcatcttttccaatataaaattaaatgcaaa 10227928  T
Q  309 gtgcattcaat 319  Q
     ||||||||||    
T  10227929 ttgcattcaat 10227939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 17722047 - 17721936
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  17722047 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaagaaatcatattttccaatgtaaaattaaatgcaaa 17721950  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  17721949 ttgcattcaatttg 17721936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 17598209 - 17598322
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||| |||  ||||  ||||||||||| |||| ||||  |||||||||| | ||||||||||||    
T  17598209 attttttttgtcccaaaatataagcaaaaaagaccaacttgtatgttatt--attatgttttttcaaacaaatcttcttttccaatgtaaaattaaatgc 17598306  T
Q  306 aaagtgcattcaattt 321  Q
    ||| ||||||||||||    
T  17598307 aaattgcattcaattt 17598322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 374028 - 374129
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| || |||||| | | ||||||||||||||| |||||||||    
T  374028 caaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatattttccgatgtaaaattaaatgcaaattgcattcaa 374125  T
Q  319 tttg 322  Q
    ||||    
T  374126 tttg 374129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 16013583 - 16013516
Alignment:
Q  298 ttaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||| ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 16013516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 31887363 - 31887248
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||| | ||||||| |||||||||  |||||   | | |||||| || |||| ||||||||||| | |||||||||||||    
T  31887363 attttctttgtctcaaattataagcataaaagaccaacttttatgctatttttatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 31887264  T
Q  307 aagtgcattcaatttg 322  Q
    |  |||||| ||||||    
T  31887263 agttgcatttaatttg 31887248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 12278625 - 12278736
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| || ||||| || | |||||||||||||||    
T  12278625 ttctttgtctcaaaatataagcaaaaaagatcaacttttatgttatt--attatgttttttcaaacaaatcattttttcaaatgtaaaattaaatgcaaa 12278722  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  12278723 ttgcattcaatttg 12278736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 2851479 - 2851536
Alignment:
Q  209 tttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtt 266  Q
    ||||||||| ||||||||||| | |||||||| || ||||||| ||||||||||||||    
T  2851479 tttctttgtcccaaattataaatgaaaaagacaaatttttatcctatttaattatgtt 2851536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 16013632 - 16013580
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaa 259  Q
    |||||||||||  |||||||| ||||||| |||| ||||||||||||||||||    
T  16013632 attttctttgtctcaaattatgagtaaaatagaccaacttttatcatatttaa 16013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 33756185 - 33756286
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| || |||| ||| | ||||||||||||||| |||||||||    
T  33756185 caaaatataagaaaaaaataccaacttttatgctatt--attatgttttttcaaacaaatcatttttttcaatgtaaaattaaatgcaaattgcattcaa 33756282  T
Q  319 tttg 322  Q
    ||||    
T  33756283 tttg 33756286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 32882875 - 32882820
Alignment:
Q  267 tttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||| ||||| | ||||||||||||| |||||||||||||||  ||||||||||||    
T  32882875 tttcaaaaaagtcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttg 32882820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 30766365 - 30766476
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||| |  |||||||||  ||||  ||||||||||| |||| ||||||| |||| ||| | |||||||||||||||    
T  30766365 ttctttgtctcaaaatataagcaaaaaaaatcaacttttatgttatt--attatgttttttcaaagaaattatttttttcaatgtaaaattaaatgcaaa 30766462  T
Q  309 gtgcattcaatttg 322  Q
     |||||| ||||||    
T  30766463 ttgcattgaatttg 30766476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 13854905 - 13854852
Alignment:
Q  233 aaaaagactaacttttatcatatttaattatgtttttccaaaaaattatctttt 286  Q
    |||||||| |||||||||||||||||||||| || ||  |||||| ||||||||    
T  13854905 aaaaagaccaacttttatcatatttaattatattgtttgaaaaaactatctttt 13854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 3095951 - 3095907
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  3095951 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 3095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 21542349 - 21542393
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  21542349 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 21542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 34177871 - 34177827
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| ||||||||||||| || ||||||||||    
T  34177871 attttctttgtaccaaaatataagtaaaaaacacaaacttttatc 34177827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 7397626 - 7397783
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  7397626 attttctttgtcccaaattataagcaaaaaagcctaacttttatcatatttaatta-gttttttcaaaaaattatcttttccaaaggaaaattaaatgca 7397724  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||| ||||||||||||||    
T  7397725 aagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaatt 7397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 35366445 - 35366328
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| | |||||||||| ||||||||  ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||    
T  35366445 attttctttgtccaaaattataagcaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaattatattttccaaagaaaaattaaattca 35366346  T
Q  307 aagtgcattcaatttgct 324  Q
    ||||||||||||||||||    
T  35366345 aagtgcattcaatttgct 35366328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 37538726 - 37538886
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||||||| |||||||||||  ||||||||  ||||||||||||||||||||||||| || |||||||||||||||| || || |||||||| ||    
T  37538726 ttattttctttgtcccaaattataaacaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaattatcttttacataggaaaattaactg 37538825  T
Q  305 caaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||||        |||||||| |||| |||| |||||||||||||    
T  37538826 caaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaatt 37538886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 5858614 - 5858495
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaa-gactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||| | |||||||||||| |||||| ||| ||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  5858614 attttctttatcccaaattataagcaaaaaaagacaaacttttatcatatttaattatgttgtttcaaaaaattatctttttcaaaggaaaattaaatgc 5858515  T
Q  306 aaagtgcattcaatttgctc 325  Q
    ||||||||||||||||||||    
T  5858514 aaagtgcattcaatttgctc 5858495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 210 - 365
Target Start/End: Original strand, 15912122 - 15912275
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaag 309  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||     
T  15912122 ttctttgttccaaattataaggaaaaaa-ac-aacttttatcatatttaattatgttatttcaaaaaatcattttttccaaagaaaaattaaatgcaaac 15912219  T
Q  310 tgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||||||||||        ||||||||| |||||||| | |||||||||||    
T  15912220 tgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaatt 15912275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 41063660 - 41063775
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||| ||||| |||||||||||| ||||||||| |||||||||||| ||||||||| || || |||||||||||||||| |||||||||||||||||||    
T  41063660 attttatttgtcccaaattataagaaaaaaagaccaacttttatcatttttaattatattgtttcaaaaaattatctttttcaaagaaaaattaaatgca 41063759  T
Q  307 aagtgcattcaatttg 322  Q
    ||||||||||||||||    
T  41063760 aagtgcattcaatttg 41063775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 51339140 - 51339040
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||    
T  51339140 attttctttgtcgcaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaaaaatcatcttttccaaagagaaattaaatgca 51339041  T
Q  307 a 307  Q
    |    
T  51339040 a 51339040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 16661434 - 16661549
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | |||||||||||| ||||||||| |||| ||||||||||||||||||||||  |||||||||||||||| |||   |||||||||||||    
T  16661434 attttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttttcaatagaaaattaaatgca 16661533  T
Q  307 aagtgcattcaatttg 322  Q
    ||||||||||||||||    
T  16661534 aagtgcattcaatttg 16661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 25185497 - 25185391
Alignment:
Q  256 ttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactacc 355  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||    
T  25185497 ttaaatatgttttttcaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacc 25185398  T
Q  356 aatgaaa 362  Q
    |||||||    
T  25185397 aatgaaa 25185391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 207 - 307
Target Start/End: Complemental strand, 51840738 - 51840638
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||   |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||    
T  51840738 attttctttgtcgtaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaaaaatcatcttttccaaagagaaattaaatgca 51840639  T
Q  307 a 307  Q
    |    
T  51840638 a 51840638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 30701611 - 30701466
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||||  |||||||||| |||| ||||  ||||||||||  || || |||||||||    
T  30701611 aaattataag-aaaaaagaccaa-ttttatcatatttaattatgtttttttaaaaaattatttttttcaaaagaaaattaaatataaggtacattcaatt 30701514  T
Q  321 tgctcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    |||||        |||||||||||||||||||||||||||||||||||    
T  30701513 tgctctctttttcattttctctataatcaactaccaatgaaaattatt 30701466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 5950358 - 5950476
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| ||| |||| ||| ||||||||| || |||||||||||||||||||  | |  |||||||||||||||||||||| ||||||||||| |    
T  5950358 attttctttgtcccagattacaagcaaaaaagacaaatttttatcatatttaattataatgtctcaaaaaattatcttttccaaaggaaaattaaatgta 5950457  T
Q  307 aagtgcattcaatttgctc 325  Q
    ||||||||| |||||||||    
T  5950458 aagtgcatttaatttgctc 5950476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 365
Target Start/End: Original strand, 13351611 - 13351757
Alignment:
Q  219 ccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||||  ||||||  |    |||| ||| |||| ||||||||||||||||||||    
T  13351611 ccaaattataagcaaaaaagaccaacttttattatatttaattatgttttttaaaaaaaaaaaaaattccgaaggaaaactaaatgcaaagtgcattcaa 13351710  T
Q  319 tttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||| ||        ||||||||||||||||||||||||||||||||    
T  13351711 tttgttctccttttcattttctctataatcaactaccaatgaaaatt 13351757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 43359607 - 43359727
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||||||||||  ||||||||||  ||||||||  || |||||||||||||||||||||| ||  ||||| ||||||||| ||||  |||||||||||    
T  43359607 ttattttctttgtctcaaattataaacaaaaaagataaatttttatcatatttaattatgttgttttaaaaatttatctttttcaaaagaaaattaaatg 43359706  T
Q  305 caaagtgcattcaatttgctc 325  Q
    |||||| ||||||||||||||    
T  43359707 caaagtacattcaatttgctc 43359727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 44510406 - 44510303
Alignment:
Q  262 atgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaa 361  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||| || |||||||    
T  44510406 atgttttttcaaaaaattaccttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaa 44510307  T
Q  362 aatt 365  Q
    ||||    
T  44510306 aatt 44510303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 34102213 - 34102097
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||| |||  ||||||||||  ||||||||| ||||||||||||||||||||||||| || | |||||| ||||||| ||||| |||||||||||||    
T  34102213 attttctctgtatcaaattataaacaaaaaagacaaacttttatcatatttaattatgttatttc-aaaaatcatctttttcaaaggaaaattaaatgca 34102115  T
Q  307 aagtgcattcaatttgctc 325  Q
    ||||||| |||||||||||    
T  34102114 aagtgca-tcaatttgctc 34102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 46804773 - 46804663
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||  | ||||||||||| ||||||||||||||| || ||||| ||||||||  |||||||||| || ||||||||||||    
T  46804773 attttctttgtcccaaattataaacagaaaagactaacgtttatcatatttaataatattttttcaaaaaatcttcttttccaaggagaaattaaatgca 46804674  T
Q  307 aagtgcattca 317  Q
    |  ||||||||    
T  46804673 atttgcattca 46804663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 13050294 - 13050383
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||| ||| ||||| |||| |||||||||| |||||||||||||||||    
T  13050294 aaaaaaaaccaacttttatcatatttaattatattttttcaaaaaactatattttcgaaaggaaaattaaatacaaagtgcattcaattt 13050383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 26907333 - 26907220
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||||||||||||| |||||||||  ||||  ||||||||||| |||| |||||||||||| ||| | ||||||||||||    
T  26907333 attttctttgtctcaaaatataagtaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaattatctttttcaatgtaaaattaaatgc 26907236  T
Q  306 aaagtgcattcaattt 321  Q
    ||| ||||||||||||    
T  26907235 aaattgcattcaattt 26907220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 40219976 - 40220086
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaag 309  Q
    ||||||||  |||| |||||| |||||||||||| ||||||  ||||  ||||||||||| |||| || |||||||||||| | |||||||||||||||     
T  40219976 ttctttgtctcaaaatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaacaaatatcttttccaatgtaaaattaaatgcaaat 40220073  T
Q  310 tgcattcaatttg 322  Q
    |||||||||||||    
T  40220074 tgcattcaatttg 40220086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 18036461 - 18036573
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||||| ||||||||||||    
T  18036461 attttctttgtctcaaaatataag-aaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaaagtaaaattaaatgc 18036557  T
Q  306 aaagtgcattcaattt 321  Q
    ||| ||||||||||||    
T  18036558 aaattgcattcaattt 18036573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 44875098 - 44875209
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  44875098 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 44875195  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  44875196 ttgcattcaatttg 44875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 45840290 - 45840149
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| |||||||   || |||||||||||||||||||||                 |||| |||||||||||||||||||    
T  45840290 attttctttgtcccaaattataagcaaaaaagttcaaattttatcatatttaattatgt-----------------tttttcaaagaaaaattaaatgca 45840208  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  45840207 aagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaatt 45840149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 323
Target Start/End: Original strand, 50176448 - 50176545
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgc 323  Q
    |||||| ||||| || ||||||||||||| |||||||||||| |  |||||||| | ||||| ||||| |||||||||| |||||||||||||||||||    
T  50176448 tataagcaaaaaggattaacttttatcatgtttaattatgttgtatcaaaaaataa-ctttttcaaagcaaaattaaatacaaagtgcattcaatttgc 50176545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 28916746 - 28916645
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||||||||||||| |||||||||  ||||  ||||||||||| |||| |||| |||||||||||   ||||||||||||||| |||||||||    
T  28916746 caaaatataagtaaaaaagacaaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatataaaattaaatgcaaattgcattcaa 28916649  T
Q  319 tttg 322  Q
    ||||    
T  28916648 tttg 28916645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 25990667 - 25990778
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| || ||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  25990667 ttctttgtctcaaaatataagcaaaaaagaccaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 25990764  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  25990765 ttgcattcaatttg 25990778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 29488664 - 29488778
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| || |||||||| | ||||||||||||    
T  29488664 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaataatattttccaatgtaaaattaaatgc 29488761  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  29488762 aagttgcattcaatttg 29488778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 52841689 - 52841569
Alignment:
Q  207 attttctttgttccaaattataagtaaaa-aagactaacttttatcatatttaattatgtttttccaaaaaattatc-ttttccaaagaaaaattaaatg 304  Q
    ||||||||| || ||||||||||| |||| ||||  ||||||||| ||||||||||||||| || |||||| ||||| ||||  ||||| ||||||| ||    
T  52841689 attttctttatttcaaattataagaaaaataagatcaacttttattatatttaattatgttatttcaaaaatttatctttttttaaagagaaattaagtg 52841590  T
Q  305 caaagtgcattcaatttgctc 325  Q
    |||| |||| ||| |||||||    
T  52841589 caaattgcaatcattttgctc 52841569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 33431460 - 33431543
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||||||||| |||||||||||||||| || |||| ||  |||||||  |||||||  ||||||| |||||||||||    
T  33431460 attttctttgttccaaaatataagtaaaaaagacaaaattttctcccatttaatcttgtttttaaaaaaaatcatcttttccaa 33431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 23874068 - 23873957
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||| | ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  23874068 ttctttgtctcaaaatatacgcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 23873971  T
Q  309 gtgcattcaatttg 322  Q
     |||||| ||||||    
T  23873970 ttgcatttaatttg 23873957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 46949240 - 46949351
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | |||||||||||||||    
T  46949240 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaa 46949337  T
Q  309 gtgcattcaatttg 322  Q
     || ||||||||||    
T  46949338 ttgtattcaatttg 46949351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 47026394 - 47026456
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||  |||||||    
T  47026394 attttctttgttctaaaatataagtaaaaaagacaaacttttatcctatttaatcttgttttt 47026456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 4529103 - 4529217
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||| |||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| || |||||||| | ||||||||||||    
T  4529103 attttttttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcattttttccaatgtaaaattaaatgc 4529200  T
Q  306 aaagtgcattcaatttg 322  Q
    ||| |||||||||||||    
T  4529201 aaattgcattcaatttg 4529217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 28017587 - 28017685
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||    
T  28017587 caaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaa 28017684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 36383842 - 36383958
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttcc--aaaaaattatcttttccaaagaaaaattaaa 302  Q
    ||||||| |||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |  ||||||| |||||| |||||| |||||||||    
T  36383842 ttattttatttgtcacaaaatataagcaaaaaagatcaacttttatgttatt--attatgttttttctaaaaaaatcatcttt-ccaaagtaaaattaaa 36383938  T
Q  303 tgcaaagtgcattcaatttg 322  Q
    |||||| |||||||||||||    
T  36383939 tgcaaattgcattcaatttg 36383958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 38942685 - 38942571
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| || |||||||| | ||||||||||||    
T  38942685 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaacaaatcattttttccaatgtaaaattaaatgc 38942588  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  38942587 aagttgcattcaatttg 38942571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 18852189 - 18852253
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| ||||||| |||||||| | ||||||||||||||| |||||||||||||    
T  18852189 attatgttttttcaaacaaattattttttccaatgtaaaattaaatgcaaattgcattcaatttg 18852253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 43656231 - 43656167
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  43656231 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 43656167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 1820315 - 1820386
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||| | | ||| |||||||||||||||| |||||||||| ||||||||| |||||||  |||||||    
T  1820315 attttctttatcctaaaatataagtaaaaaagacaaacttttatcctatttaattttgtttttttaaaaaat 1820386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 6786737 - 6786820
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| | ||||||  |||||||  |||||| | ||||||||||    
T  6786737 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctctttaatcttgtttttttaaaaaaatctcttttccaa 6786820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 25185572 - 25185497
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattat 281  Q
    |||||||||||| |||||||||||  |||||  |  |||||||||||||||||| ||||||||  |||||||||||    
T  25185572 tattttctttgtcccaaattataataaaaaacaaacaacttttatcatatttaaatatgttttctcaaaaaattat 25185497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 28017005 - 28016934
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  28017005 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaaaat 28016934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 37192981 - 37192879
Alignment:
Q  219 ccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||||||||||| |||||| |  |||| || || |||||||||||||| ||   ||||||||||||||||||||  |||||| |||||||  ||||||||    
T  37192981 ccaaattataagaaaaaaacatcaactgtt-tcttatttaattatgttgtttataaaaattatcttttccaaagtgaaattatatgcaaacggcattcaa 37192883  T
Q  319 tttg 322  Q
    ||||    
T  37192882 tttg 37192879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 44149093 - 44149011
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||  ||||||||  |||||||  ||||||| |||||||||||    
T  44149093 attttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt-aaaaaaatcatcttttccaa 44149011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 7468214 - 7468152
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||    
T  7468214 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttt 7468152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 15285723 - 15285834
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| || ||||||   |||  ||||||||||| |||| |||| ||||||| ||| | |||||||||||||||    
T  15285723 ttctttgtctcaaaatataagcaaaaaagaccaatttttatgccatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaa 15285820  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  15285821 ttgcattcaatttg 15285834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 49924335 - 49924434
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  49924335 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 49924432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 9127962 - 9128072
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||| ||||| |||| |||| ||||||| ||| | ||||||||||| |||    
T  9127962 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcatctttttcaatgtaaaattaaatgtaaa 9128059  T
Q  309 gtgcattcaattt 321  Q
     ||||||||||||    
T  9128060 ttgcattcaattt 9128072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 40935857 - 40935743
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  |||||  |||||||| | |||| |||| ||||||||||| | ||||||||||||    
T  40935857 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgtttcttcaaacaaatcatcttttccaatgtaaaattaaatgc 40935760  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  40935759 aagttgcatttaatttg 40935743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 40960718 - 40960604
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||| ||| | ||||||||||||    
T  40960718 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgc 40960621  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  40960620 aagttgcatttaatttg 40960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 15959901 - 15959830
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| || ||||||| ||||||||  |||||||  |||||||    
T  15959901 attttctttgtcccaaaatataagcaaaaaagacaaatttttatcttatttaatcttgtttttttaaaaaat 15959830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 39026477 - 39026377
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| || |||||||| | ||||||||||||||  |||||| ||    
T  39026477 caaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaataaatcatattttccaatgtaaaattaaatgcaagttgcatttaa 39026380  T
Q  319 ttt 321  Q
    |||    
T  39026379 ttt 39026377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 46542881 - 46542972
Alignment:
Q  207 attttctttgttccaaattataag-taaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaa 297  Q
    ||||||||||| ||||| ||||||  ||||||||| ||||||| || ||||||||| |||||||  ||||||| || |||| | ||||||||    
T  46542881 attttctttgtcccaaaatataagcaaaaaaagacaaacttttctcctatttaattttgtttttaaaaaaaatcatttttttccaagaaaaa 46542972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 47600301 - 47600218
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| | ||| |||||||||||||||| || ||||||| ||||||||  | |||||  |||||| | ||||||||||    
T  47600301 attttctttgtccgaaagtataagtaaaaaagacaaatttttatcctatttaatcttatttttaaaaaaaaatctcttttccaa 47600218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 16688119 - 16688213
Alignment:
Q  271 caaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||| |||||||||||| || ||||||||||||||||| |||| ||| ||||         |||||||| |||| |||| |||||||||||||    
T  16688119 caaaaatttatcttttccagaggaaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaatt 16688213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 35941760 - 35941871
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||| |  |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | |||||||||| ||||    
T  35941760 ttctttgtctcaaaatataagcaaaaaaaatcaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatacaaa 35941857  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  35941858 ttgcattcaatttg 35941871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 4672799 - 4672887
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaa 296  Q
    ||||||||||| ||||| |||||| ||||||||  || ||||||| ||||||||  |||||||  |||||| | ||||||||||| ||||    
T  4672799 attttctttgtcccaaaatataagcaaaaaagataaatttttatcctatttaatcttgttttt-taaaaaaatctcttttccaaaaaaaa 4672887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 8889863 - 8889818
Alignment:
Q  276 aattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    ||||||| |||  |||||||||||||||| ||||||||||||||||    
T  8889863 aattatcctttttaaagaaaaattaaatgtaaagtgcattcaattt 8889818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 31970552 - 31970439
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  |||||  |||||| ||| |||| |||| ||||||||||| | ||||||||||||    
T  31970552 attttctttgtatcaaaatataag-aaaaaagatcaacttttatgttattt--ttatgtcttttcaaacaaatcatcttttccaatgtaaaattaaatgc 31970456  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  31970455 aagttgcatttaatttg 31970439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 2125968 - 2126012
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| | ||| |||||||||||||||| ||||||||||    
T  2125968 attttctttgtcctaaaatataagtaaaaaagacaaacttttatc 2126012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 12449197 - 12449153
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  12449197 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 12449153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 32624236 - 32624192
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  32624236 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 32624192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 39555816 - 39555772
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  39555816 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 39555772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 47996920 - 47996984
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| |||| ||||||||||| | |||||||||| |||| || ||||||||||    
T  47996920 attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatacaaattgtattcaatttg 47996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 9e-49; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 17314747 - 17314905
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||| |||||||||| |||  |||||||||| ||    
T  17314747 attttctttgttccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaacttatcttttctaaaagaaaattaaatcca 17314846  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  17314847 aagtgcattcaatttgctctccttttcattttctctataatcaactaccaatgaaaatt 17314905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 25195278 - 25195131
Alignment:
Q  219 ccaaattataagtaaaaaa-gactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattca 317  Q
    |||||||||||| |||||| | | ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  25195278 ccaaattataagcaaaaaaaggccaacttctatcatatttaattatgttttttcaaaaacttatcttttccaaagaaaaattaaatgcaaagtgcattca 25195179  T
Q  318 atttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||        |||||||||||||||||| |||||||||||||    
T  25195178 atttgctctctttttcattttctctataatcaaccaccaatgaaaatt 25195131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 242 - 365
Target Start/End: Complemental strand, 41362515 - 41362392
Alignment:
Q  242 aacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctc 341  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||        ||||||||    
T  41362515 aacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttctc 41362416  T
Q  342 tataatcaactaccaatgaaaatt 365  Q
    ||||||||||||||||||||||||    
T  41362415 tataatcaactaccaatgaaaatt 41362392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 8673299 - 8673456
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||  |  |||||||  ||||||||||||||||||||| |||||||||||||    
T  8673299 attttctttgtcccaaattataagcaaaaaagaccaacttttatcatattttttagtgttttta-aaaaaattatcttttccaaaggaaaattaaatgca 8673397  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||| ||||||||||||||        ||||||||||||||||||||||||||||||||    
T  8673398 aagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaatt 8673456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 207 - 325
Target Start/End: Original strand, 17713140 - 17713258
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||    
T  17713140 attttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattgtttcaacaaattatcttttccaaaggaaaattaaatgca 17713239  T
Q  307 aagtgcattcaatttgctc 325  Q
    ||||||||||||| |||||    
T  17713240 aagtgcattcaatgtgctc 17713258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 205 - 367
Target Start/End: Complemental strand, 41791704 - 41791543
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||||||| | |||||||||| |||| | || |||||||||||||||||||||| ||||| |||||||| ||||||||||||  |||||||||||    
T  41791704 ttattttctttgtcctaaattataagcaaaacaaac-aacttttatcatatttaattatcttttttcaaaaaatcatcttttccaaaagaaaattaaatg 41791606  T
Q  305 caaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaattat 367  Q
     ||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  41791605 taaaatgcattcaatttgctctcttttttattttctctataatcaactaccaatgaaaattat 41791543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 26954635 - 26954477
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||||||| | |||||| || |||||||||||||||||||||  |||||||||||||    
T  26954635 attttctttgtcccaaattataagtaaaaaagaccaaattttatcatattttactatgttgtttcaaaaaattatcttttccaaaagaaaattaaatgca 26954536  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||||| ||||||         |||||||| |||| |||| |||||||||||||    
T  26954535 aagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaatt 26954477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 28497755 - 28497638
Alignment:
Q  208 ttttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaa 307  Q
    |||| ||||| |||||||||||| |||| | || ||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||     
T  28497755 ttttttttgtcccaaattataagcaaaatataccaacttttatcatatttaattatgttatttcaaaaaattatcttttccaaaggaaaattaaatgcat 28497656  T
Q  308 agtgcattcaatttgctc 325  Q
    ||||||||||||||||||    
T  28497655 agtgcattcaatttgctc 28497638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 368
Target Start/End: Complemental strand, 2628408 - 2628246
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||| |||| |||||||||||| |||||| || |||||||||||||||||||||| || || |||||||||||||||| ||||| |||||| |||||    
T  2628408 tattttccttgtcccaaattataagaaaaaaacaccaacttttatcatatttaattatattgtttcaaaaaattatctttttcaaaggaaaatttaatgc 2628309  T
Q  306 aaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    |||||| |||||||||||||        |||||||| |||| |||  ||||||||||||||||    
T  2628308 aaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatt 2628246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 5217309 - 5217419
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| || |||||| |||| || ||||||||||||    
T  5217309 attttctttgtaccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaacatcatctttcccaaggagaaattaaatgca 5217408  T
Q  307 aagtgcattca 317  Q
    |  ||||||||    
T  5217409 atttgcattca 5217419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 17336713 - 17336817
Alignment:
Q  261 tatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatga 360  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||    
T  17336713 tatgttttttcaaaaaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatga 17336812  T
Q  361 aaatt 365  Q
    |||||    
T  17336813 aaatt 17336817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 365
Target Start/End: Complemental strand, 4039127 - 4038966
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgt-ttttccaaaaaattatcttttccaaagaaaaattaaat 303  Q
    ||||||||||||| ||| |||||||  |||||| ||||||||||||||||||||||||||| ||||  ||||||  |     | ||| ||||||||||||    
T  4039127 ttattttctttgtcccatattataaaaaaaaaaaactaacttttatcatatttaattatgttttttttaaaaaaaaaaaaaattcaaggaaaaattaaat 4039028  T
Q  304 gcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    | ||||||||||||||||||||        ||||||||||||||||||||| ||||||||||    
T  4039027 gtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaatt 4038966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 27819590 - 27819694
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||||| ||||||||  |||||||||||||||||||| |||| || |||||||| ||||||| ||||| ||||||||||||||| | |||| ||||    
T  27819590 aaattataagcaaaaaagataaacttttatcatatttaattttgttatttcaaaaaatcatctttttcaaaggaaaattaaatgcaaactacatttaatt 27819689  T
Q  321 tgctc 325  Q
    |||||    
T  27819690 tgctc 27819694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 14576385 - 14576270
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | | |||||||||  ||||||||  ||||||||||||||||||||||||| || |||||||  |  |   ||||||||||||||||||||    
T  14576385 attttctttatcctaaattataataaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaaaaaaat---ccaaagaaaaattaaatgca 14576289  T
Q  307 aagtgcattcaatttgctc 325  Q
    |||||||||||||||||||    
T  14576288 aagtgcattcaatttgctc 14576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 8745502 - 8745658
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||| ||||||||||| ||||||    ||||| ||||||||||||||||||| || |||||||| ||||||| ||||  |||||||||||||    
T  8745502 attttctttgttgcaaattataagaaaaaaatc--aacttctatcatatttaattatgttatttcaaaaaatcatctttttcaaaagaaaattaaatgca 8745599  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    || |   || |||||||||        ||||| |||||||||||| |||||||||||||    
T  8745600 aactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaatt 8745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 12894010 - 12893899
Alignment:
Q  213 tttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgc 312  Q
    ||||| ||||||||||||  ||||| |||||||||||||||||||||||||||| ||  |||||| |||||||| |||||| |||||||||| ||| | |    
T  12894010 tttgtcccaaattataagctaaaaaaactaacttttatcatatttaattatgttattttaaaaaa-tatcttttacaaagagaaattaaatgaaaatttc 12893912  T
Q  313 attcaatttgctc 325  Q
    ||| | |||||||    
T  12893911 attaattttgctc 12893899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 25321830 - 25321711
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||  |||| |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||    
T  25321830 ttattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 25321733  T
Q  304 gcaaagtgcattcaatttgctc 325  Q
    ||||  |||||| |||||||||    
T  25321732 gcaagttgcatttaatttgctc 25321711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 365
Target Start/End: Complemental strand, 29147465 - 29147322
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatt 320  Q
    |||||||||| |||||| | ||| |||||||| ||||||||||||| || |||||||| || ||||   ||| ||||||||||||||| |||||| ||||    
T  29147465 aaattataagaaaaaaa-attaatttttatcacatttaattatgttatttcaaaaaatcatatttttttaaggaaaattaaatgcaaactgcatttaatt 29147367  T
Q  321 tgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    || ||        |||||||||||||||||| || ||||||||||    
T  29147366 tgatctccatttcattttctctataatcaacaactaatgaaaatt 29147322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 34899841 - 34899957
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagacta-acttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||| || |||||||  ||| ||||||||| | || || |||||||||||||||||| || |||||||| |||||||| |||| ||||||||||||    
T  34899841 attttcttcgtcccaaatttcaagcaaaaaagaccacacattaatcatatttaattatgttatttcaaaaaatcatcttttctaaagtaaaattaaatgc 34899940  T
Q  306 aaagtgcattcaatttg 322  Q
     || | |||||||||||    
T  34899941 taatttcattcaatttg 34899957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 3099871 - 3099986
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt--ccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||||||||| |||| |||||| ||||||||| | |||||||  ||||  |||||||||||  | || |||| ||||||||||| | |||||||||||    
T  3099871 attttctttgtttcaaaatataagcaaaaaagacaatcttttatgctatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatg 3099968  T
Q  305 caaagtgcattcaatttg 322  Q
    |||| |||||||||||||    
T  3099969 caaattgcattcaatttg 3099986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 27621067 - 27621163
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  27621067 tataagcaaaaaagacaaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 27621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 27740524 - 27740641
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||||||||| ||  |||| || ||||||||| |||  ||||||||||     
T  27740524 tattttttttgttctaaattataag-aaaaaagataaacttttatcatatttaattatgttgttttaaaatatcatcttttcc-aagtcaaattaaatgt 27740621  T
Q  306 aaagtgcattcaatttgctc 325  Q
    ||| | ||||| ||||||||    
T  27740622 aaatttcattcgatttgctc 27740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 35525496 - 35525567
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||  |||||||| |||||||    
T  35525496 attttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatttaatcttgtttttctaaaaaat 35525567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 38072114 - 38072169
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaatta 262  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttatcatatttaatta 38072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 35259979 - 35260090
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  35259979 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 35260076  T
Q  309 gtgcattcaatttg 322  Q
     | |||||||||||    
T  35260077 ttccattcaatttg 35260090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 11043976 - 11044090
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| || |||||||| | ||||||||||||    
T  11043976 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaataaatcatattttccaatgtaaaattaaatgc 11044073  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  11044074 aagttgcattcaatttg 11044090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 14693365 - 14693418
Alignment:
Q  272 aaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctc 325  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  14693365 aaaaaattcttttttccaaagaaaaattaaatacaaagtgcattcaatttgctc 14693418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 24612722 - 24612608
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | ||||||||||||    
T  24612722 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgc 24612625  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  24612624 aagttgcattcaatttg 24612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 38072169 - 38072238
Alignment:
Q  296 aattaaatgcaaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaatt 38072238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 36537977 - 36538090
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  36537977 attttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 36538074  T
Q  306 aaagtgcattcaattt 321  Q
    ||  |||||| |||||    
T  36538075 aatttgcatttaattt 36538090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 24892736 - 24892807
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  24892736 attttctttgttccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgttttttaaaaaaat 24892807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 4047156 - 4047075
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttcca 289  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||  ||||||||  |||||||  ||||||||||||||||||    
T  4047156 attttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt-aaaaaaattatcttttcca 4047075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 8712452 - 8712545
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcatt 315  Q
    |||||||||||||||| ||| |||||||||  |||||||||||||| ||  ||||| |||| |||| |||| |||||||||||| ||| ||||||    
T  8712452 aaattataagtaaaaa-gaccaacttttattttatttaattatgttattttaaaaatttattttttacaaaaaaaaattaaatgtaaattgcatt 8712545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 37597992 - 37598103
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  | ||  ||||||||||| |||| |||| || |||||||| | |||||||||||||||    
T  37597992 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgttgtt--attatgttttttcaaacaaatcattttttccaatgtaaaattaaatgcaaa 37598089  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  37598090 ttgcattcaatttg 37598103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 27752505 - 27752619
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||  ||||||||| |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  27752505 attttctttgtctcaaaatataaacaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 27752602  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  27752603 aagttgcatttaatttg 27752619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 32678751 - 32678637
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||||  ||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  32678751 attttctttgttttaaaatataagcaaaaaagataaacttttatgttatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 32678654  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  32678653 aagttgcatttaatttg 32678637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 17749805 - 17749690
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| |  ||||||||||||||||| |||| |||| |||||||||||||||| || || || ||| | || |||| |   | |||||||||||||    
T  17749805 attttctttataacaaattataagtaaaaatgactcacttatatcatatttaattatattatttcataaactcatatttttc---gtaaaattaaatgca 17749709  T
Q  307 aagtgcattcaatttgctc 325  Q
    || |||||| |||||||||    
T  17749708 aattgcatttaatttgctc 17749690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 2238776 - 2238721
Alignment:
Q  267 tttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||| ||||||| ||||||||||||| |||||||||||||||  ||||||||||||    
T  2238776 tttcaaaaaaatcatcttttccaaagtaaaattaaatgcaaatcgcattcaatttg 2238721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 34890436 - 34890365
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  34890436 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaat 34890365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 44052539 - 44052654
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt--ccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||| |  |||| |||||| |||||| || |||||||||  ||||  |||||||||||  | || |||| ||||||||||| | |||||||||||    
T  44052539 attttctttatctcaaaatataagcaaaaaaaaccaacttttatgttatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatg 44052636  T
Q  305 caaagtgcattcaatttg 322  Q
    |||| |||||||||||||    
T  44052637 caaattgcattcaatttg 44052654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 44358715 - 44358619
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||||||||  |||||||||  ||||  |||| |||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  44358715 tataagcaaaaaagatcaacttttatgttatt--attacgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 44358619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 11992704 - 11992761
Alignment:
Q  265 tttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| || |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  11992704 tttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 11992761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 31133219 - 31133158
Alignment:
Q  261 tatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    ||||||||| |||| |||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  31133219 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 31133158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 33851265 - 33851151
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||   |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  33851265 attttctttgcctcaaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 33851168  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  33851167 aagttgcatttaatttg 33851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 34158547 - 34158482
Alignment:
Q  213 tttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| |||||||||||||||  |||||||||| ||||||||  |||||||  |||||||    
T  34158547 tttgttccaaaatataagtaaaaaagataaacttttatcgtatttaatcttgttttttaaaaaaat 34158482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 30576091 - 30576027
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||||||| ||||| |||||| ||||||||| || ||||||| ||||||||  |||||||    
T  30576091 ttattttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatttaatcttgttttt 30576027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 37567623 - 37567559
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| || | |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  37567623 attatgttttttcagacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 37567559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 39187202 - 39187266
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| |||| ||| ||||||| | ||||||||||||||| |||||||||||||    
T  39187202 attatgttttttcaaacaaatcatcatttccaatgtaaaattaaatgcaaattgcattcaatttg 39187266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 40773636 - 40773560
Alignment:
Q  221 aaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaa 297  Q
    ||||||||||||||||||| ||||||||| | |||||||| | ||| || |||||| | || ||||||||| |||||    
T  40773636 aaattataagtaaaaaagattaacttttaccctatttaatcacgttgtttcaaaaactcattttttccaaataaaaa 40773560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 41362890 - 41362846
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaactttta 249  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||    
T  41362890 ttattttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 41426324 - 41426372
Alignment:
Q  274 aaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||| ||||||| ||||| ||||||||||||||| |||||||||||||    
T  41426324 aaaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttg 41426372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 13144223 - 13144141
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||| ||||||| ||| |||||  |||||| ||| ||||||||    
T  13144223 attttctttgtctcaaaatataagcaaaaaagacaaacttttatcctatttaa-tattttttttaaaaaaaatattttttccaa 13144141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 34713514 - 34713561
Alignment:
Q  275 aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  34713514 aaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 34713561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 36190669 - 36190752
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| |||||||||  ||||||||| ||||||||  |||||||  |||||| | | ||||||||    
T  36190669 attttctttgtcccaaaatataagcaaaaaagacacacttttatcctatttaatcttgtttttaaaaaaaaatctattttccaa 36190752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 2052753 - 2052823
Alignment:
Q  227 taagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaa 297  Q
    |||||||||||||  |||||||||| ||||||||  |||||||| ||||||  ||||||| |||| |||||    
T  2052753 taagtaaaaaagataaacttttatcctatttaatcttgtttttctaaaaaaccatctttttcaaaaaaaaa 2052823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 40487856 - 40487794
Alignment:
Q  259 attatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||||||||| || |||| ||||||||||| | |||||| |||||||  ||||||||||||    
T  40487856 attatgtttttcaaacaaatcatcttttccaatgtaaaattcaatgcaagttgcattcaattt 40487794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 318
Target Start/End: Original strand, 16635494 - 16635604
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttt-tccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||| | ||| ||||||||| |||||| |||||||||  ||||  | |||||||| | |||||||| |||||||| |||| |||||| ||| |    
T  16635494 attttctttgtcctaaaatataagtaagaaagaccaacttttatgctatt--actatgttttcttcaaaaaatcatcttttcaaaagtaaaatttaattc 16635591  T
Q  306 aaagtgcattcaa 318  Q
    ||| | |||||||    
T  16635592 aaatttcattcaa 16635604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 44411426 - 44411340
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaat 319  Q
    ||||||||| |||||||||  ||||  ||||| ||||| |||| |||| ||||||| ||| | ||||||||||||||| ||||||||||    
T  44411426 aaaaaagaccaacttttatgctatt--attatattttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaat 44411340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 7022634 - 7022590
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  7022634 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7022590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 7858457 - 7858501
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  7858457 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7858501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 8107881 - 8107798
Alignment:
Q  207 attttctttgttccaaattataag-taaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| ||||||  ||||||||| || ||||||| ||||||||  |||||||  |||||| ||||||||||||    
T  8107881 attttctttgtcccaaaatataagcaaaaaaagacaaatttttatcttatttaatcttgtttttttaaaaaa-tatcttttccaa 8107798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 33563770 - 33563718
Alignment:
Q  209 tttctttgttccaaattataagtaaaaaagactaacttttatcatatttaatt 261  Q
    ||||||||| |||||||||||| ||||| ||  |||||||||| |||||||||    
T  33563770 tttctttgtcccaaattataagcaaaaatgataaacttttatcctatttaatt 33563718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 35888209 - 35888052
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||| ||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  35888209 attttatttgtcccaaattataag-aaaaaagaccaactttcatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaataaaatgca 35888111  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||||||        ||||||||||||||||||||| ||||||||||    
T  35888110 aagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaatt 35888052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 219 - 365
Target Start/End: Complemental strand, 31769190 - 31769045
Alignment:
Q  219 ccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  31769190 ccaaattataagcaaaaa-gaccaacttttatcatatttaattatgttttttcaaaatattatcttttccaaaggaaaattaaatgcaaagtgcattcaa 31769092  T
Q  319 tttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||        |||||||||||||||||||| |||||||||||    
T  31769091 tttgctctcatttttattttctctataatcaactatcaatgaaaatt 31769045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 368
Target Start/End: Original strand, 38260234 - 38260396
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaactttt-atcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||||| ||||||||||||||||||| || ||||||| || |||||||||||| || || |||||||||||||||||||||  ||||||||||||    
T  38260234 attttctttgtcccaaattataagtaaaaaatacaaactttttatgatatttaattatattgtttcaaaaaattatcttttccaaatgaaaattaaatgc 38260333  T
Q  306 aaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaattatt 368  Q
    |||||||||| |||||||||        |||||||| ||||| ||  ||||||||||||||||    
T  38260334 aaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatt 38260396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 39170452 - 39170570
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    |||||||||||||  ||||||||||  |||||| |  ||||||||| ||||||||||||||| || ||||||||||||||||| |||| |||||||||||    
T  39170452 ttattttctttgtctcaaattataaacaaaaaatatcaacttttattatatttaattatgttgttacaaaaaattatcttttcaaaag-aaaattaaatg 39170550  T
Q  305 caaagtgcattcaatttgct 324  Q
    ||||||||||||||||||||    
T  39170551 caaagtgcattcaatttgct 39170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 22369145 - 22369255
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    |||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||| |||||||| || || ||||||||||||    
T  22369145 attttctttgtatcaaattataagaaaaaaaaactaacttttatcatatttaattatgttttttcaaaaaatcatcttttcaaaggagaaattaaatgca 22369244  T
Q  307 aagtgcattca 317  Q
    |  ||||||||    
T  22369245 atttgcattca 22369255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 36576333 - 36576447
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||||||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  36576333 attttctttgtctcaaaatataagtaaaaaagacaaacttttatgctatt--attatgttttttcaaataaatcatcttttccaatgtaaaattaaatgc 36576430  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  36576431 aagttgcattcaatttg 36576447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 25651501 - 25651422
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatctttt 286  Q
    ||||||||| | ||||||| ||||| |||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  25651501 attttctttatcccaaattttaagttaaaaagactaacttttatcatatttagttaagttttttcaaaaaatcatctttt 25651422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 45598822 - 45598933
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| |||||||||||| ||||||  ||||  ||||||||||| |||| |||| ||||||||||| | |||||||||||||||    
T  45598822 ttctttgtctcaaaatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaa 45598919  T
Q  309 gtgcattcaatttg 322  Q
     |||||||||||||    
T  45598920 ttgcattcaatttg 45598933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 3777945 - 3778014
Alignment:
Q  255 tttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgct 324  Q
    ||||||||| || || |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3777945 tttaattatattgtttcaaaaatttatcttttccaaaggaaaattaaatgaaaagtgcattcaatttgct 3778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 24151821 - 24151764
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattat 263  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  24151821 tattttctttgtcccaaattataagcaaaaaagaccaacttttatcatatttaattat 24151764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 39348708 - 39348818
Alignment:
Q  211 tctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaatta-tcttttccaaagaaaaattaaatgcaaag 309  Q
    ||||||| ||||| |||||| ||||||||| |||||||||  ||||  ||| |||| || |||||||||| |||||||||||| |||||||||||||||     
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttatgctatt--attgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaaat 39348805  T
Q  310 tgcattcaatttg 322  Q
    || ||||||||||    
T  39348806 tgtattcaatttg 39348818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 23106393 - 23106482
Alignment:
Q  232 aaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||||||||||||||||  ||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||||||| |||||||||||||    
T  23106393 aaaaaagactaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttg 23106482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 48879321 - 48879417
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaatt-atcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||||||||||||| |||||||||  ||||  ||||||||||| ||||||| | ||||||| ||| | ||||||||||||||| |||||||||||||    
T  48879321 tataagtaaaaaagaccaacttttatgttatt--attatgttttttcaaaaaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttg 48879417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 33092864 - 33092770
Alignment:
Q  223 attataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattca 317  Q
    |||||||| |||||| || ||||||||||||| | ||||||||| ||  ||||||| |||||||  ||||| |||||||||||||| ||||||||    
T  33092864 attataagcaaaaaataccaacttttatcatactcaattatgttatttaaaaaaatcatctttttaaaagagaaattaaatgcaaaatgcattca 33092770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 47383323 - 47383434
Alignment:
Q  209 tttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaa 307  Q
    |||||||||  |||| |||||| |||||| || ||||||||| |||||  ||||||||||| |||| |||| ||||||||||| | ||||||||||| ||    
T  47383323 tttctttgtctcaaaatataagcaaaaaataccaacttttatgatatt--attatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgtaa 47383420  T
Q  308 agtgcattcaattt 321  Q
    | ||||||||||||    
T  47383421 attgcattcaattt 47383434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 3157351 - 3157465
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||| ||||  |||| |||||| |||||||||||||||||||  ||||  ||||||| ||| |||| |||| ||||||||||| | ||||||||||||    
T  3157351 attttccttgtctcaaaatataagcaaaaaagactaacttttatgctatt--attatgtattttcaaacaaatcatcttttccaatgtaaaattaaatgc 3157448  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  3157449 aagttgcattcaatttg 3157465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 44600361 - 44600475
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||||||  | ||||||||||||    
T  44600361 attttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaataaatcatcttttccagtgtaaaattaaatgc 44600458  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  44600459 aagttgcattcaatttg 44600475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 42617599 - 42617700
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||| |||| |||| |||||  ||||||||||| |||| ||||||| |||| ||| | ||||||||||||||| |||||||||    
T  42617599 caaaatataagcaaaaaagacaaactcttatgatatt--attatgttttttcaaacaaattatttttttcaatgtaaaattaaatgcaaattgcattcaa 42617696  T
Q  319 tttg 322  Q
    ||||    
T  42617697 tttg 42617700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 43108102 - 43107990
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt--ccaaaaaattatcttttccaaagaaaaattaaatgcaa 307  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  |||||||||||  | || |||| ||||||||||| | ||||||||||||||    
T  43108102 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--attatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 43108005  T
Q  308 agtgcattcaatttg 322  Q
    | |||||||||||||    
T  43108004 attgcattcaatttg 43107990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 33153013 - 33153068
Alignment:
Q  267 tttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  33153013 tttcaaaaaaattatctttttcaaagtaaaattaaatgcaaattgcattcaatttg 33153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 34808152 - 34808248
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | ||||||||||||||| |||||||||||||    
T  34808152 tataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaacaaatcatctttttcaacgtaaaattaaatgcaaattgcattcaatttg 34808248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 35181125 - 35181221
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||||||||| |||||||||  ||||  ||||||||||| |||| |||| ||||||| ||| | ||||||||||||||| |||||||||||||    
T  35181125 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatttg 35181221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 30082327 - 30082381
Alignment:
Q  267 tttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  30082327 tttcaaaaaaatcatcttttccaaagtaaaattaaatgcaaattgcattcaattt 30082381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 39174179 - 39174225
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  39174179 ttattttctttgttccaaaatataagtaaaaaagacaaacttttatc 39174225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 29713149 - 29713209
Alignment:
Q  248 tatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    |||||||||||||| |||| || ||||||||||| |||| |||||| ||||||||||||||    
T  29713149 tatcatatttaattttgttatttcaaaaaattatttttttcaaagagaaattaaatgcaaa 29713209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 25944476 - 25944547
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  25944476 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttatttaatcttgtttttttaaaaaat 25944547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 37767255 - 37767145
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||||| | |||||||||||||||||||| ||||||| ||    ||||||||||| || ||||||   ||||||||||||   ||||||| ||||    
T  37767255 attttctttgtcctaaattataagtaaaaaagacaaacttttgtc--ccttaattatgttatttcaaaaa---atcttttccaaaatgaaattaagtgca 37767161  T
Q  307 aagtgcattcaatttg 322  Q
    || |||||| ||||||    
T  37767160 aattgcatttaatttg 37767145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 19933254 - 19933140
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||| |  |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  19933254 attttctttatctcaaaatataagcaaaaaagataaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 19933157  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  19933156 aagttgcatttaatttg 19933140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 19964393 - 19964279
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    ||||||||| |  |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||    
T  19964393 attttctttatctcaaaatataagcaaaaaagataaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 19964296  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||| ||||||    
T  19964295 aagttgcatttaatttg 19964279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 41815892 - 41815778
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgc 305  Q
    |||||||||||  |||| |||||| ||||||||  |||||||||  ||||  ||||||||||| |||| |||| || |||||||| | |||||||||||     
T  41815892 attttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt--attatgttttttcaaataaatcatattttccaatgtaaaattaaatgt 41815795  T
Q  306 aaagtgcattcaatttg 322  Q
    ||  |||||||||||||    
T  41815794 aagttgcattcaatttg 41815778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 6882371 - 6882434
Alignment:
Q  258 aattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||||| ||||||| || |||| ||||||||||||||||| ||| |||||| ||||||    
T  6882371 aattatgtttttc-aaaaaatcatatttttcaaagaaaaattaaatgaaaattgcatttaatttg 6882434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 23731488 - 23731589
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| ||||||||  |||||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||||||  |||||| ||    
T  23731488 caaaatataagcaaaaaagatcaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatttaa 23731585  T
Q  319 tttg 322  Q
    ||||    
T  23731586 tttg 23731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 46760488 - 46760444
Alignment:
Q  206 tattttctttgttccaaattataagtaaaaaagactaacttttat 250  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||    
T  46760488 tattttctttgtcccaaaatataagtaaaaaagacaaacttttat 46760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 4910893 - 4910822
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| |||||  || ||||||||| |||||||||  ||||||| ||||||||    
T  4910893 attttctttgtcccaaaatataagcaaaaagaacaaacttttattatatttaatcttgttttttcaaaaaat 4910822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 325
Target Start/End: Complemental strand, 18800907 - 18800856
Alignment:
Q  274 aaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgctc 325  Q
    ||||| ||||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  18800907 aaaatcatctttttcaaagtaaaattaaatgtaaattgcattcaatttgctc 18800856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 28608363 - 28608402
Alignment:
Q  283 ttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  28608363 ttttccaaagtaaaattaaatgcaaattgcattcaatttg 28608402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 35069095 - 35069013
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||| ||||| ||||| |||||||||||| ||| |||||||||| ||||||||  || ||||  ||||||| |||||||||||    
T  35069095 attttttttgtcccaaaatataagtaaaaatgacaaacttttatcctatttaatcttg-ttttaaaaaaaatcatcttttccaa 35069013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 40583073 - 40583173
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaa 318  Q
    |||| |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| || |||| ||| | ||||||||||||||| |||||||||    
T  40583073 caaaatataagcaaaaaataccaacttttatgttatt--attatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaa 40583170  T
Q  319 ttt 321  Q
    |||    
T  40583171 ttt 40583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 47778672 - 47778754
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaa 290  Q
    ||||||||||| ||||| |||||| ||||||||| || ||||||  ||||||||  |||||||  ||||||| |||||||||||    
T  47778672 attttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatcttgttttt-aaaaaaatcatcttttccaa 47778754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 22111511 - 22111416
Alignment:
Q  225 tataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||| |||||| || |||||||||  ||||  ||||||||||| |||| |||| || |||| ||| | ||||||||||||||| ||||||||||||    
T  22111511 tataagcaaaaaataccaacttttatgttatt--attatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaattt 22111416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 40560295 - 40560410
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||  |||| |||||  |||||||||  | ||||||  |||||  |||||||||| |||| |||| ||||||||||| | ||||||||||    
T  40560295 ttattttctttgtctcaaaatataatcaaaaaagacccatttttatgctattt--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 40560392  T
Q  304 gcaaagtgcattcaattt 321  Q
    ||||  |||||| |||||    
T  40560393 gcaagttgcatttaattt 40560410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 21654316 - 21654206
Alignment:
Q  211 tctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaag 309  Q
    |||||||  |||| |||||  ||||| ||| |||||||||  ||||  ||||||||||| |||| |||| | ||||||||| | |||||||||||||||     
T  21654316 tctttgtctcaaaatataaacaaaaaggaccaacttttatgctatt--attatgttttttcaaacaaatcaccttttccaatgtaaaattaaatgcaaat 21654219  T
Q  310 tgcattcaatttg 322  Q
    | |||||||||||    
T  21654218 tacattcaatttg 21654206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 35084235 - 35084186
Alignment:
Q  273 aaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||| ||||||    
T  35084235 aaaaatcatcctttccaaagtaaaattaaatgcaaattgcattgaatttg 35084186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 48339397 - 48339348
Alignment:
Q  272 aaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaattt 321  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| |||||    
T  48339397 aaaaaactatcttttccaaactaaaattaaatgcaaactgcatttaattt 48339348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 48938031 - 48937974
Alignment:
Q  265 tttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| || |||| ||||||||||| | |||||||||| |||| |||||||||||||    
T  48938031 tttttcaaacaaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttg 48937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 48943057 - 48943000
Alignment:
Q  265 tttttccaaaaaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    |||||| || |||| ||||||||||| | |||||||||| |||| |||||||||||||    
T  48943057 tttttcaaacaaatcatcttttccaatgtaaaattaaatacaaattgcattcaatttg 48943000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 16562679 - 16562723
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||||||||||||| || |||||||    
T  16562679 attttctttgtcccaaaatataagtaaaaaagacaaatttttatc 16562723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 16602983 - 16602939
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||||||||||||| || |||||||    
T  16602983 attttctttgtcccaaaatataagtaaaaaagacaaatttttatc 16602939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 18102460 - 18102504
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  18102460 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 18102504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 322
Target Start/End: Complemental strand, 32491307 - 32491192
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaat 303  Q
    |||||||||||||   ||| |||||| |||||| || |||||||||  |||||   ||||||||| |||| |||| |||||||| || | ||||||||||    
T  32491307 ttattttctttgtctgaaaatataagcaaaaaaaaccaacttttatgctattt---tatgttttttcaaacaaatcatcttttcgaatgtaaaattaaat 32491211  T
Q  304 gcaaagtgcattcaatttg 322  Q
    ||||  |||||| ||||||    
T  32491210 gcaagttgcatttaatttg 32491192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 41889136 - 41889200
Alignment:
Q  259 attatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 322  Q
    ||||||||||| |||| |||| ||||||||||| | |||||| || ||||| |||||||||||||    
T  41889136 attatgttttttcaaacaaatcatcttttccaatgtaaaattcaaagcaaattgcattcaatttg 41889200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 3087 - 3245
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatgca 306  Q
    ||||||||| | | |||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  3087 attttctttatcctaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagcaaaattatatgca 3186  T
Q  307 aagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    |||||||||||||||| |         |||||||||||||||||||||||||| |||||    
T  3187 aagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaatt 3245  T

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Target: scaffold0565 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 365
Target Start/End: Complemental strand, 6116 - 5959
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaattatcttttccaaagaaaaattaaatg 304  Q
    ||||||||||||| |||| ||||||| |||||| || |||||||||||||||||||||||||||| ||||||   ||||||| ||||  |||||||||||    
T  6116 ttattttctttgtcccaagttataagcaaaaaa-accaacttttatcatatttaattatgttttttcaaaaa--catctttttcaaaagaaaattaaatg 6020  T
Q  305 caaagtgcattcaatttgctcnnnnnnnnattttctctataatcaactaccaatgaaaatt 365  Q
    ||||||||||||||||| |||        ||||| |||||||||||||| ||| |||||||    
T  6019 caaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaatt 5959  T

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Target: scaffold0495 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 4550 - 4657
Alignment:
Q  210 ttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaa-aaattatcttttccaaagaaaaattaaatgcaaa 308  Q
    ||||||||  |||| |||||| ||||||||| |||||||||  ||||  |||||||||||||||| |||| |||||| ||||   |||||||||||||||    
T  4550 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgtttttccaaacaaatcatcttt-ccaatataaaattaaatgcaaa 4646  T
Q  309 gtgcattcaat 319  Q
     ||||||||||    
T  4647 ttgcattcaat 4657  T

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Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 912 - 983
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  912 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttttaaaaaat 983  T

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Target: scaffold0132; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 8872 - 8943
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||| |||||| ||||||||| |||||||||| ||||||||  |||||||  |||||||    
T  8872 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttttaaaaaat 8943  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 157692 - 157756
Alignment:
Q  205 ttattttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattatgttttt 269  Q
    ||||||||||||| ||||| |||||| ||||||||| |||||||||  ||||||||  |||||||    
T  157692 ttattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgttttt 157756  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 22776 - 22718
Alignment:
Q  220 caaattataagtaaaaaagactaacttttatcatatttaattatgtttttccaaaaaat 278  Q
    ||||||||||| ||||||||| ||||||| | ||| ||||||||||| || ||||||||    
T  22776 caaattataagcaaaaaagacaaacttttgttatacttaattatgttatttcaaaaaat 22718  T

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Target: scaffold1157 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 2100 - 2045
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatcatatttaattat 263  Q
    ||||||| ||| |||||||||||| ||||| ||| ||||||| ||||||||||||||    
T  2100 attttctatgtcccaaattataagcaaaaa-gacaaacttttgtcatatttaattat 2045  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 77888 - 77932
Alignment:
Q  207 attttctttgttccaaattataagtaaaaaagactaacttttatc 251  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  77888 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77932  T

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