View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_high_71 (Length: 269)
Name: NF2014_high_71
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_high_71 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 23766832 - 23766592
Alignment:
| Q |
18 |
ctcatgagattgaatccttattttccacttctcctagcggtggtaagaatcataagaaggtcaaacttttttaacaaattgatcatgatcatgtatgtag |
117 |
Q |
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| T |
23766832 |
ctcatgagattgaatccttattttccacttctccaagcggtggtaagaatcataagaaggtcaaacttttttaacaaattgatcatgatcatgtatgtag |
23766733 |
T |
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| Q |
118 |
tgaccacaaaataatatgcatgtgggagagttgttgagttgatcgacccatgacatatctttttatttattgatcattaattactagtatatgttacgta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23766732 |
tgaccacaaaataatatgcatgtgggagagttgttgagttgatcgacccatgacatatctttttatttattgatcattaattactagtatatgttacgta |
23766633 |
T |
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| Q |
218 |
gtacctctagtgttcatttgttagttgtagaaatttccttt |
258 |
Q |
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| T |
23766632 |
gtacctctagtgttcatgtgttagttgtagaaatttccttt |
23766592 |
T |
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