View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2014_low_102 (Length: 244)

Name: NF2014_low_102
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2014_low_102
NF2014_low_102
[»] chr7 (61 HSPs)
chr7 (20-180)||(40463762-40463922)
chr7 (21-105)||(42798629-42798713)
chr7 (22-105)||(47077945-47078028)
chr7 (18-89)||(39123866-39123937)
chr7 (21-105)||(42805484-42805568)
chr7 (21-105)||(47716419-47716503)
chr7 (18-105)||(18326994-18327081)
chr7 (22-105)||(21172099-21172182)
chr7 (22-105)||(32758221-32758304)
chr7 (18-105)||(42495923-42496010)
chr7 (22-104)||(10693163-10693245)
chr7 (21-105)||(2541110-2541195)
chr7 (21-105)||(43557432-43557516)
chr7 (21-105)||(46354154-46354238)
chr7 (22-105)||(48735212-48735296)
chr7 (21-100)||(19426980-19427059)
chr7 (18-85)||(28078219-28078286)
chr7 (21-103)||(27629596-27629678)
chr7 (32-106)||(35334916-35334990)
chr7 (21-105)||(7794597-7794681)
chr7 (21-105)||(22699061-22699145)
chr7 (21-90)||(29907392-29907463)
chr7 (21-104)||(11617679-11617762)
chr7 (18-89)||(33871997-33872068)
chr7 (23-105)||(7193045-7193127)
chr7 (21-110)||(1424001-1424090)
chr7 (21-90)||(3469270-3469339)
chr7 (36-105)||(14732928-14732997)
chr7 (21-90)||(19265790-19265859)
chr7 (21-90)||(28362236-28362305)
chr7 (46-105)||(8149062-8149121)
chr7 (22-89)||(42476849-42476916)
chr7 (21-74)||(38262287-38262340)
chr7 (22-83)||(42391190-42391251)
chr7 (21-105)||(5180248-5180332)
chr7 (21-89)||(7644932-7645000)
chr7 (21-105)||(21447550-21447634)
chr7 (22-89)||(13805078-13805145)
chr7 (18-105)||(34626295-34626382)
chr7 (19-90)||(44123710-44123781)
chr7 (23-90)||(48123577-48123644)
chr7 (21-103)||(5814433-5814515)
chr7 (19-88)||(6736867-6736936)
chr7 (21-102)||(12473267-12473348)
chr7 (21-90)||(14099097-14099166)
chr7 (21-90)||(14409114-14409183)
chr7 (21-90)||(16341253-16341322)
chr7 (21-90)||(23419765-23419834)
chr7 (22-105)||(2663025-2663106)
chr7 (21-79)||(18747472-18747530)
chr7 (25-90)||(1524281-1524346)
chr7 (21-78)||(8491906-8491963)
chr7 (21-78)||(8518715-8518772)
chr7 (21-105)||(25198682-25198769)
chr7 (21-102)||(42101976-42102056)
chr7 (21-61)||(7879642-7879682)
chr7 (46-86)||(11741774-11741814)
chr7 (46-90)||(19266425-19266469)
chr7 (21-89)||(22065564-22065632)
chr7 (18-82)||(32233222-32233286)
chr7 (21-61)||(35203443-35203483)
[»] chr8 (35 HSPs)
chr8 (18-105)||(13160662-13160749)
chr8 (22-106)||(20869588-20869672)
chr8 (18-102)||(28407379-28407463)
chr8 (21-105)||(35261639-35261723)
chr8 (22-105)||(12670340-12670423)
chr8 (18-101)||(18164847-18164930)
chr8 (22-105)||(30454187-30454270)
chr8 (21-105)||(28817717-28817801)
chr8 (21-105)||(36720756-36720840)
chr8 (21-105)||(39461087-39461171)
chr8 (20-105)||(7136619-7136704)
chr8 (20-101)||(17823540-17823621)
chr8 (21-105)||(2626479-2626563)
chr8 (21-105)||(20284164-20284248)
chr8 (21-105)||(21070793-21070877)
chr8 (21-105)||(25250482-25250566)
chr8 (21-105)||(44530109-44530193)
chr8 (18-89)||(45071241-45071312)
chr8 (21-101)||(6760786-6760866)
chr8 (21-105)||(29521776-29521860)
chr8 (21-88)||(24365151-24365218)
chr8 (21-82)||(11748282-11748343)
chr8 (21-90)||(14018060-14018129)
chr8 (24-105)||(24245411-24245491)
chr8 (21-105)||(8897855-8897939)
chr8 (21-89)||(26954108-26954176)
chr8 (21-90)||(42083790-42083859)
chr8 (22-90)||(44781598-44781666)
chr8 (21-90)||(22598132-22598201)
chr8 (21-86)||(30962864-30962929)
chr8 (22-86)||(35105902-35105966)
chr8 (21-83)||(31457155-31457217)
chr8 (21-94)||(12625860-12625933)
chr8 (19-79)||(23000307-23000365)
chr8 (21-90)||(26457690-26457759)
[»] chr4 (58 HSPs)
chr4 (18-105)||(5648219-5648306)
chr4 (18-105)||(6430713-6430800)
chr4 (21-104)||(16408694-16408777)
chr4 (22-105)||(48598915-48598998)
chr4 (19-105)||(17315387-17315473)
chr4 (21-106)||(21646923-21647008)
chr4 (21-105)||(14590797-14590881)
chr4 (25-105)||(16911522-16911602)
chr4 (22-105)||(5306755-5306838)
chr4 (22-105)||(11054238-11054321)
chr4 (18-105)||(30639340-30639427)
chr4 (19-89)||(40915805-40915875)
chr4 (21-105)||(14983794-14983878)
chr4 (18-90)||(42164236-42164308)
chr4 (21-105)||(54730209-54730293)
chr4 (22-105)||(20224944-20225027)
chr4 (22-105)||(47528620-47528703)
chr4 (25-90)||(487230-487295)
chr4 (46-105)||(23501753-23501812)
chr4 (21-90)||(35567145-35567214)
chr4 (21-90)||(47441621-47441690)
chr4 (21-90)||(54640430-54640499)
chr4 (21-105)||(30352682-30352766)
chr4 (21-87)||(23580299-23580365)
chr4 (22-84)||(39077886-39077948)
chr4 (20-86)||(49938680-49938746)
chr4 (21-105)||(10660364-10660448)
chr4 (21-105)||(10874509-10874593)
chr4 (21-105)||(37494811-37494895)
chr4 (21-89)||(44363223-44363291)
chr4 (18-85)||(54175043-54175111)
chr4 (26-105)||(55766561-55766641)
chr4 (26-105)||(55830816-55830896)
chr4 (22-85)||(17043486-17043549)
chr4 (23-86)||(30496413-30496476)
chr4 (21-79)||(25463108-25463166)
chr4 (21-87)||(30690274-30690340)
chr4 (21-82)||(7385567-7385628)
chr4 (25-90)||(12257688-12257753)
chr4 (21-90)||(39029152-39029221)
chr4 (24-89)||(43035224-43035289)
chr4 (49-105)||(5313113-5313169)
chr4 (21-89)||(19027824-19027892)
chr4 (21-89)||(25343163-25343231)
chr4 (22-82)||(41018885-41018945)
chr4 (45-88)||(3580951-3580994)
chr4 (46-105)||(13256513-13256572)
chr4 (54-105)||(20405053-20405104)
chr4 (21-104)||(54966983-54967065)
chr4 (26-100)||(8473716-8473790)
chr4 (18-80)||(32629356-32629418)
chr4 (22-87)||(9832403-9832468)
chr4 (68-105)||(18969701-18969738)
chr4 (18-87)||(32478873-32478942)
chr4 (21-90)||(36589719-36589787)
chr4 (66-102)||(20908774-20908809)
chr4 (18-86)||(49938526-49938594)
chr4 (38-90)||(50856344-50856396)
[»] chr2 (42 HSPs)
chr2 (21-105)||(25079809-25079893)
chr2 (22-105)||(7214494-7214577)
chr2 (18-105)||(12024006-12024093)
chr2 (18-105)||(25249825-25249912)
chr2 (22-105)||(8455408-8455491)
chr2 (21-105)||(11514396-11514480)
chr2 (21-105)||(14530278-14530362)
chr2 (21-94)||(24200716-24200789)
chr2 (22-105)||(9671140-9671224)
chr2 (21-105)||(10543658-10543742)
chr2 (22-105)||(21779351-21779434)
chr2 (22-105)||(23397726-23397809)
chr2 (21-87)||(5841006-5841072)
chr2 (21-98)||(17623531-17623608)
chr2 (14-105)||(17705455-17705547)
chr2 (21-105)||(17896219-17896303)
chr2 (18-105)||(22371017-22371102)
chr2 (21-96)||(17667971-17668046)
chr2 (21-90)||(21377164-21377233)
chr2 (18-87)||(44604832-44604901)
chr2 (28-88)||(99361-99421)
chr2 (21-89)||(40416962-40417030)
chr2 (18-85)||(17380324-17380391)
chr2 (22-93)||(45235910-45235981)
chr2 (21-87)||(5450263-5450329)
chr2 (19-105)||(27573581-27573667)
chr2 (21-90)||(23145789-23145858)
chr2 (21-90)||(23557579-23557648)
chr2 (21-90)||(44521464-44521533)
chr2 (18-74)||(14444720-14444776)
chr2 (21-105)||(19977805-19977889)
chr2 (21-89)||(39914397-39914465)
chr2 (21-87)||(31158532-31158598)
chr2 (21-90)||(4516442-4516511)
chr2 (21-90)||(29419980-29420049)
chr2 (66-105)||(39189557-39189596)
chr2 (21-87)||(17472949-17473015)
chr2 (19-101)||(24860075-24860157)
chr2 (18-80)||(25641487-25641549)
chr2 (21-90)||(33795260-33795329)
chr2 (25-105)||(14544023-14544103)
chr2 (21-61)||(17471552-17471592)
[»] chr1 (51 HSPs)
chr1 (21-105)||(46248044-46248128)
chr1 (18-105)||(27474264-27474351)
chr1 (21-105)||(30395819-30395903)
chr1 (18-105)||(32632644-32632731)
chr1 (22-105)||(34725188-34725271)
chr1 (23-105)||(14617021-14617103)
chr1 (21-105)||(41319897-41319981)
chr1 (18-105)||(22930155-22930242)
chr1 (18-101)||(33222971-33223054)
chr1 (22-105)||(38478372-38478455)
chr1 (22-105)||(47214494-47214577)
chr1 (21-90)||(18724636-18724705)
chr1 (21-94)||(23768411-23768484)
chr1 (21-105)||(18944626-18944710)
chr1 (21-105)||(20004183-20004267)
chr1 (21-105)||(46991787-46991871)
chr1 (21-105)||(25290146-25290232)
chr1 (18-105)||(45402078-45402164)
chr1 (22-105)||(45812627-45812710)
chr1 (21-89)||(4430117-4430185)
chr1 (21-89)||(6925099-6925167)
chr1 (18-90)||(11596511-11596583)
chr1 (33-105)||(34714606-34714678)
chr1 (23-89)||(20036219-20036285)
chr1 (21-105)||(10668203-10668292)
chr1 (21-90)||(17470437-17470506)
chr1 (21-105)||(18742051-18742136)
chr1 (22-90)||(35117860-35117928)
chr1 (22-89)||(19414438-19414505)
chr1 (26-89)||(27201646-27201709)
chr1 (46-105)||(40424725-40424784)
chr1 (28-105)||(9939443-9939521)
chr1 (21-90)||(2435878-2435947)
chr1 (21-90)||(2435984-2436053)
chr1 (21-86)||(22327101-22327166)
chr1 (21-90)||(52910215-52910284)
chr1 (21-105)||(8197026-8197110)
chr1 (47-103)||(19932869-19932925)
chr1 (21-88)||(19701570-19701637)
chr1 (21-88)||(25468354-25468421)
chr1 (21-105)||(24564327-24564411)
chr1 (25-89)||(50760321-50760385)
chr1 (22-105)||(12126927-12127010)
chr1 (66-105)||(21723647-21723686)
chr1 (21-72)||(35005139-35005190)
chr1 (18-56)||(22324925-22324963)
chr1 (36-89)||(6983915-6983968)
chr1 (21-90)||(50811937-50812006)
chr1 (46-90)||(10378841-10378885)
chr1 (21-105)||(18335379-18335463)
chr1 (22-74)||(35253277-35253329)
[»] chr5 (26 HSPs)
chr5 (18-105)||(41014279-41014366)
chr5 (22-105)||(22861758-22861841)
chr5 (18-105)||(2838738-2838826)
chr5 (21-105)||(4619197-4619281)
chr5 (21-105)||(24448850-24448934)
chr5 (21-105)||(38879541-38879625)
chr5 (21-105)||(43334162-43334246)
chr5 (22-105)||(35710273-35710356)
chr5 (22-105)||(37024646-37024729)
chr5 (21-105)||(23974741-23974824)
chr5 (21-89)||(27328728-27328796)
chr5 (22-105)||(8170074-8170157)
chr5 (21-105)||(1565391-1565475)
chr5 (21-90)||(28516525-28516594)
chr5 (14-80)||(22907948-22908014)
chr5 (25-90)||(39301098-39301163)
chr5 (21-105)||(22187245-22187329)
chr5 (22-78)||(32703411-32703467)
chr5 (18-105)||(31299592-31299679)
chr5 (39-90)||(39079875-39079926)
chr5 (18-90)||(209015-209087)
chr5 (17-81)||(1850624-1850688)
chr5 (21-85)||(34074653-34074717)
chr5 (22-89)||(22600430-22600497)
chr5 (37-90)||(10634253-10634306)
chr5 (49-89)||(31362454-31362494)
[»] chr3 (38 HSPs)
chr3 (18-105)||(10870039-10870126)
chr3 (18-105)||(16735423-16735510)
chr3 (18-105)||(22609749-22609835)
chr3 (21-105)||(8247780-8247864)
chr3 (21-105)||(13730695-13730779)
chr3 (22-105)||(7696977-7697060)
chr3 (21-105)||(46421128-46421212)
chr3 (25-105)||(52926305-52926385)
chr3 (22-105)||(39203498-39203581)
chr3 (24-105)||(13628886-13628968)
chr3 (21-105)||(40272903-40272987)
chr3 (22-105)||(1217072-1217155)
chr3 (22-105)||(22123007-22123090)
chr3 (14-86)||(5173804-5173876)
chr3 (18-94)||(26869700-26869776)
chr3 (21-105)||(29366813-29366897)
chr3 (18-105)||(6411909-6411996)
chr3 (21-88)||(34420735-34420802)
chr3 (21-90)||(26573124-26573193)
chr3 (21-90)||(30928238-30928307)
chr3 (21-90)||(45620920-45620989)
chr3 (21-105)||(4495755-4495839)
chr3 (21-105)||(9607185-9607269)
chr3 (21-105)||(12914126-12914210)
chr3 (11-90)||(53062035-53062115)
chr3 (21-79)||(516417-516475)
chr3 (57-106)||(25517300-25517349)
chr3 (21-90)||(35417913-35417982)
chr3 (21-90)||(53996657-53996726)
chr3 (21-89)||(26782364-26782432)
chr3 (21-84)||(7942993-7943056)
chr3 (21-88)||(25944468-25944535)
chr3 (21-76)||(54032650-54032705)
chr3 (21-105)||(12525392-12525473)
chr3 (18-76)||(33926094-33926152)
chr3 (22-76)||(45139570-45139624)
chr3 (36-105)||(4537013-4537082)
chr3 (22-90)||(28904940-28905008)
[»] chr6 (26 HSPs)
chr6 (21-106)||(14975171-14975256)
chr6 (21-101)||(12222008-12222088)
chr6 (14-105)||(9161083-9161174)
chr6 (21-105)||(3815168-3815252)
chr6 (22-105)||(1346924-1347007)
chr6 (22-105)||(1354847-1354930)
chr6 (24-105)||(29355951-29356033)
chr6 (21-105)||(8409203-8409287)
chr6 (38-105)||(33922936-33923003)
chr6 (21-94)||(6024204-6024277)
chr6 (21-105)||(20400627-20400711)
chr6 (22-88)||(2166504-2166570)
chr6 (22-88)||(2178137-2178203)
chr6 (21-102)||(12889390-12889470)
chr6 (21-105)||(12063427-12063511)
chr6 (21-104)||(13905070-13905152)
chr6 (33-94)||(8417443-8417504)
chr6 (21-105)||(15866128-15866212)
chr6 (21-105)||(24734593-24734677)
chr6 (21-80)||(18277284-18277343)
chr6 (21-88)||(32728247-32728314)
chr6 (21-87)||(22967149-22967215)
chr6 (21-87)||(23821178-23821244)
chr6 (21-94)||(14553483-14553555)
chr6 (21-106)||(24097540-24097625)
chr6 (21-105)||(1941815-1941899)
[»] scaffold0258 (1 HSPs)
scaffold0258 (19-105)||(13112-13198)
[»] scaffold0005 (1 HSPs)
scaffold0005 (21-105)||(226497-226581)
[»] scaffold0187 (4 HSPs)
scaffold0187 (22-105)||(10140-10223)
scaffold0187 (22-105)||(20468-20551)
scaffold0187 (46-105)||(8905-8964)
scaffold0187 (46-105)||(19233-19292)
[»] scaffold0168 (1 HSPs)
scaffold0168 (22-105)||(30539-30622)
[»] scaffold0031 (1 HSPs)
scaffold0031 (14-94)||(43100-43180)
[»] scaffold0024 (1 HSPs)
scaffold0024 (37-105)||(83835-83903)
[»] scaffold0223 (1 HSPs)
scaffold0223 (22-104)||(11093-11174)
[»] scaffold0194 (1 HSPs)
scaffold0194 (36-105)||(24624-24693)
[»] scaffold0057 (2 HSPs)
scaffold0057 (21-105)||(24863-24942)
scaffold0057 (21-102)||(46794-46875)
[»] scaffold0049 (1 HSPs)
scaffold0049 (21-105)||(58937-59021)
[»] scaffold0116 (1 HSPs)
scaffold0116 (18-89)||(8867-8938)
[»] scaffold0254 (1 HSPs)
scaffold0254 (22-88)||(4134-4200)
[»] scaffold0036 (1 HSPs)
scaffold0036 (26-79)||(35114-35167)
[»] scaffold1176 (1 HSPs)
scaffold1176 (22-89)||(1677-1744)
[»] scaffold0311 (1 HSPs)
scaffold0311 (48-94)||(10781-10827)
[»] scaffold0018 (1 HSPs)
scaffold0018 (21-103)||(72958-73034)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 40463922 - 40463762
Alignment:
Q  20 gtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttataagagggtgttta 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40463922 gtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggttataagagggtgttta 40463823  T
Q  120 taaaagaagtggggtatgactcacaaatcacacataaaacaattgggtcaattttctatag 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40463822 taaaagaagtggggtatgactcacaaatcacacataaaacaattgggtctattttctatag 40463762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 42798713 - 42798629
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  42798713 tttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 42798629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 47077945 - 47078028
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  47077945 ttttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 47078028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 39123937 - 39123866
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  39123937 ctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacc 39123866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 42805568 - 42805484
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||  ||||||||||    
T  42805568 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggtta 42805484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 47716503 - 47716419
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||| |||||||||| || |||||||||||||||    
T  47716503 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggtta 47716419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 18327081 - 18326994
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| |||||||   |||||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||||||    
T  18327081 ctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggtta 18326994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 21172099 - 21172182
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||| ||||||||||||||||||| |||| ||||||||||    
T  21172099 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggtta 21172182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 32758304 - 32758221
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  32758304 ttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 32758221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 42495923 - 42496010
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||| ||||||| ||||||| | |||||||||||||||| || |||||| ||||||||||||||||| |||| ||||||||||    
T  42495923 ctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggtta 42496010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 10693163 - 10693245
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtt 104  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||  |||| |||||||||    
T  10693163 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 2541110 - 2541195
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttac-agtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || | ||||||||||||||||||||||| |||| ||||||||||    
T  2541110 tttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggtta 2541195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 43557516 - 43557432
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| | ||||||||    
T  43557516 tttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggtta 43557432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 46354238 - 46354154
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| | |||||||||||||||| || || ||||||||||||||||||||| |||| ||||||||||    
T  46354238 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccagttgcgccaaggtta 46354154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 48735212 - 48735296
Alignment:
Q  22 ttttacacaagagactgtttctaag-acttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||  |||||| ||| ||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  48735212 ttttacacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 48735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 19426980 - 19427059
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaa 100  Q
    |||||||||||||| ||||||| | |||||||||||||||| || | |||||||||||||||||||||| |||| |||||    
T  19426980 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 28078219 - 28078286
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactt 85  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  28078219 ctgtttttttacacgagactgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 27629678 - 27629596
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggt 103  Q
    |||||||||||||| ||||||| | |||||||||||||||| || | |||| ||||||||||||||||| |||| ||||||||    
T  27629678 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 35334916 - 35334990
Alignment:
Q  32 gagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttat 106  Q
    ||||||||||| | ||||||||| |||||| || |||||||||||||||||||||||| |||| |||||||||||    
T  35334916 gagactgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttat 35334990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 7794597 - 7794681
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||| ||||| ||||||| | |||||||||||||||| || ||||||||| |||||||||||||| |||| || |||||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggtta 7794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 22699061 - 22699145
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| |||| | ||||||||||| | || || |||||||||||||||||||||||| |||| | ||||||||    
T  22699061 tttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 22699145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 29907463 - 29907392
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatg--acaacaactttaccg 90  Q
    |||||||||||||| ||||||||| |||||||||||||||| || ||||||||||  |||||||||||||||    
T  29907463 tttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttaccg 29907392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 11617679 - 11617762
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtt 104  Q
    ||||||||||||||  |||||| | |||||||||| ||||| || |||||||||||||||||||||||| |||| ||| |||||    
T  11617679 tttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 33871997 - 33872068
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||||||  |||||| | |||||||||||| ||| || ||||||||||||||||||||||||    
T  33871997 ctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 33872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 7193127 - 7193045
Alignment:
Q  23 tttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||  |||||| | |||||||||||||||| || |||||||||||||||||||||||  |||  ||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggtta 7193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 1424001 - 1424090
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttataaga 110  Q
    ||||||||||| |||||||||| | || ||||| ||||||| || ||||||||| |||||||||||||| |||| ||||| |||| ||||    
T  1424001 tttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgccaaagttaaaaga 1424090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 3469270 - 3469339
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||| |||||||| |||||||  | ||||| || |||||||||||||||||||||||||    
T  3469270 tttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttaccg 3469339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 14732928 - 14732997
Alignment:
Q  36 ctgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  14732928 ctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggtta 14732997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 19265859 - 19265790
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||| | |||| || |||||||||||||||||| || ||||||| |||||||||||||||||    
T  19265859 tttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 19265790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 28362236 - 28362305
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| | ||||||| |||||||||| ||||| || ||| |||||||||||||||||||||    
T  28362236 tttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaactttaccg 28362305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 8149062 - 8149121
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||| |||||| || |||||||||||||||||| ||||| |||||||||||||||    
T  8149062 gacttgaactcgtgactttgcagtcacatgacaacaacattaccagttgtgccaaggtta 8149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 42476916 - 42476849
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||||||||| |  ||||||| ||||||| ||  |||||||||||||||||||||||    
T  42476916 ttttacacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttacc 42476849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 38262287 - 38262340
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacat 74  Q
    |||||||||||||||||||||| | |||||||||||||||| || |||||||||    
T  38262287 tttttacacaagagactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 42391190 - 42391251
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaac 83  Q
    ||||||||||||  ||||||| | |||||||||||||||| || ||||||||||||||||||    
T  42391190 ttttacacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 5180248 - 5180332
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||| ||||||||| ||||||| |  | |||||||| |||| || |||||||||||||||||||||||| |||| | ||||||||    
T  5180248 ttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 5180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 7645000 - 7644932
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||| ||||||| | |||||||||||||||| || ||||||| | ||||||| ||||||    
T  7645000 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacc 7644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 21447634 - 21447550
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||  |||||||||| ||||||| || || | |||||||||||| |||| | |||| ||||||||||    
T  21447634 tttttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggtta 21447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 13805145 - 13805078
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||| |||| || |||| | ||||||||||||| || || ||||||||||||||||||||||||    
T  13805145 ttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaactttacc 13805078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 34626295 - 34626382
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||| ||||||| | |||||||| | ||| | || || ||||||||||||||||||||| |||| || |||||||    
T  34626295 ctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggtta 34626382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 44123710 - 44123781
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||||| ||||||| |  |||||||||||| |  || ||||||||||||| |||||||||||    
T  44123710 tgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttaccg 44123781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 48123577 - 48123644
Alignment:
Q  23 tttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||| ||||||| | ||||||||||| |||| || ||| ||||||| |||||||||||||    
T  48123577 tttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaactttaccg 48123644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 5814515 - 5814433
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggt 103  Q
    |||||||| |||||  | |||| || ||||||||||||||| || || |||||| ||||||||||||||| ||| ||||||||    
T  5814515 tttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaaggt 5814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 6736936 - 6736867
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||| |||||||  |||||  | |||||||||||||||| || ||||| |||||||||||||||||    
T  6736936 tgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 12473348 - 12473267
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaagg 102  Q
    |||| |||||||||  |||||  | ||||||||||| |||| || |||  |||||||||||||||||||||||| |||||||    
T  12473348 ttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccggttgcgccaagg 12473267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 14099097 - 14099166
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||| || || |||| | ||||| ||||| |||| || |||||||||||||||||||||||||    
T  14099097 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttaccg 14099166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 14409114 - 14409183
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||| || || |||| | ||||| ||||| |||| || |||||||||||||||||||||||||    
T  14409114 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttaccg 14409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 16341322 - 16341253
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| |||||||||  ||||||||||||||| || ||   |||||| |||||||||||||    
T  16341322 tttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttaccg 16341253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 23419765 - 23419834
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| |  ||||||||| ||||| ||  |||||||||||| |||||||||||    
T  23419765 tttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttaccg 23419834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 2663025 - 2663106
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | ||||||||||  ||||  | ||||||||| |||||||||||||  |||| ||||||||||    
T  2663025 ttttacacaagaggctgtttccaggacttgaacctatgac--tccagtcacataacaacaactttactagttgcgccaaggtta 2663106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 18747530 - 18747472
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaa 79  Q
    ||||||||||| || ||||||| ||||||||| |||||||| || ||||||| ||||||    
T  18747530 tttttacacaaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 1524281 - 1524346
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||| |||||| ||||||||||||  ||||| || ||||| | ||||||| |||||||||    
T  1524281 tacacaagaggctgtttataagacttgaacttgtgacctttcagtctcgtgacaaccactttaccg 1524346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 8491963 - 8491906
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgaca 78  Q
    |||||| |||||||||||||| ||||||||||||  ||||| || ||||||| |||||    
T  8491963 tttttaaacaagagactgtttttaagacttgaacttgtgacctttcagtcacgtgaca 8491906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 8518772 - 8518715
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgaca 78  Q
    |||||| |||||||||||||| ||||||||||||  ||||| || ||||||| |||||    
T  8518772 tttttaaacaagagactgtttttaagacttgaacttgtgacctttcagtcacgtgaca 8518715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 25198769 - 25198682
Alignment:
Q  21 tttttacacaagagactgtttctaagactt---gaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||| |||||||||| |||||||   || ||| |||  || |||||| ||||||||||||||||| |||  ||||||||||    
T  25198769 tttttacacaaaagactgtttccaagactttttgatcccatgatctttcagtcatatgacaacaactttaccagttacgccaaggtta 25198682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 42101976 - 42102056
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaagg 102  Q
    |||||||  ||||| ||||||| | |||||||||   |||| || ||||||| |||||||||||||||| ||||||||||||    
T  42101976 tttttacggaagaggctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc-gttgtgccaagg 42102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 7879682 - 7879642
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgac 61  Q
    ||||||||||||||| |||||| | ||||||||||||||||    
T  7879682 tttttacacaagagattgtttccaggacttgaacccgtgac 7879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 11741814 - 11741774
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  11741814 gacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 19266469 - 19266425
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||  ||| || |||||||||||||||||||||||||    
T  19266469 gacttgaacccacgacctttcagtcacatgacaacaactttaccg 19266425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 22065632 - 22065564
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||  |||||| || |||||||| | |||| || || |||| ||||||||||||||||    
T  22065632 tttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacc 22065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 32233222 - 32233286
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaa 82  Q
    |||||||||||||||||  |||||| | ||||||||||| |||| || ||||||  |||||||||    
T  32233222 ctgtttttacacaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 35203483 - 35203443
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgac 61  Q
    ||||||||||||||| |||||| | ||||||||||||||||    
T  35203483 tttttacacaagagaatgtttccaggacttgaacccgtgac 35203443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 13160749 - 13160662
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||    
T  13160749 ctgtttttacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggtta 13160662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 20869588 - 20869672
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttat 106  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttat 20869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 28407463 - 28407379
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaagg 102  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| |||||||    
T  28407463 ctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 35261723 - 35261639
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||||||||| | | |||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  35261723 tttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 35261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 12670340 - 12670423
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  12670340 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 12670423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 18164847 - 18164930
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaag 101  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||| |||||||| ||||||    
T  18164847 ctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaag 18164930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 30454187 - 30454270
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  30454187 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 30454270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 28817717 - 28817801
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||  |||||||||    
T  28817717 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggtta 28817801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 36720840 - 36720756
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||  ||||||||||    
T  36720840 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggtta 36720756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 39461087 - 39461171
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || ||||| |||||||||||||||||| |||| ||||||||||    
T  39461087 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggtta 39461171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 7136619 - 7136704
Alignment:
Q  20 gtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||  |||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  7136619 gtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 7136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 17823621 - 17823540
Alignment:
Q  20 gtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaag 101  Q
    ||||||||||||||| ||||||| | |||||||||||||||| || | |||||||||||||||||||||| |||| ||||||    
T  17823621 gtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaag 17823540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 2626563 - 2626479
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || | ||||||||||||||||||||||  ||| ||||||||||    
T  2626563 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggtta 2626479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 20284164 - 20284248
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| | ||||||||    
T  20284164 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 20284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 21070793 - 21070877
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| | ||||||||    
T  21070793 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 21070877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 25250566 - 25250482
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||| || ||||||| | |||||||||  ||||| || |||||||||||||||||||||||| |||||||||||||||    
T  25250566 tttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggtta 25250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 44530193 - 44530109
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| |||||||||||||||||| ||  |||||||||||| |||||||||| |||| ||||||||||    
T  44530193 tttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggtta 44530109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 45071312 - 45071241
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||||| ||||||| |  ||||||||||||||| ||||| |||||||||||||||||||||    
T  45071312 ctgtttttacacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttacc 45071241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 6760866 - 6760786
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaag 101  Q
    |||||||||||||| ||||||| | |||||||||||||||| ||  ||||| ||||||||||||||||| |||| ||||||    
T  6760866 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaag 6760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 29521776 - 29521860
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| || |||||||| ||||||||||||| | |||| ||||||||||    
T  29521776 tttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggtta 29521860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24365151 - 24365218
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||||||| ||||||||| | |||||||||||||| ||  ||||||||||||||||||||||    
T  24365151 tttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 11748343 - 11748282
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaa 82  Q
    |||||||| ||||| ||||||| |||||||||||||||||| || |||||||||||||||||    
T  11748343 tttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 11748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 14018060 - 14018129
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||||||||||| ||||||||||||| |||| || || |||| |||||||||| ||||||    
T  14018060 tttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattaccg 14018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 24245491 - 24245411
Alignment:
Q  24 ttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||| ||||||| ||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||  |||||||||    
T  24245491 ttacataagagac-gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggtta 24245411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 8897855 - 8897939
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||| |  |||||| | ||||| |||||||||| || | |||||||||||||||||||||| ||||||||| |||||    
T  8897855 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttgtgccagggtta 8897939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 26954176 - 26954108
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||| ||||||| | |||||||||||||||| ||  | |||||||||||||||||||||    
T  26954176 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacc 26954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 42083790 - 42083859
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||| || ||||||| | |||||||||||||||| || ||||||| ||||||||| |||||||    
T  42083790 tttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttaccg 42083859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 44781598 - 44781666
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||  |||||| | |||||||||||||||  || ||||||| |||||||||||||||||    
T  44781598 ttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttaccg 44781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 22598201 - 22598132
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||  |||||| | || ||||||||||||| || ||||||  |||||||||||||||||    
T  22598201 tttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttaccg 22598132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 30962864 - 30962929
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    |||||||||||||| ||||||| | ||||||||  |||||| || || ||||||||||||||||||    
T  30962864 tttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 35105966 - 35105902
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    |||||||||||||  |||||| | |||||||||||||||| || ||| ||| |||||||||||||    
T  35105966 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 31457217 - 31457155
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaac 83  Q
    ||||||||||||||  |||||  | |||||||||||||||| || ||| ||||||||||||||    
T  31457217 tttttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 12625933 - 12625860
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    ||||||||||||||  |||||| | ||||||| |||||||| |   ||||||| ||||||||||||||| ||||    
T  12625933 tttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttg 12625860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 23000307 - 23000365
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaa 79  Q
    |||||||||||||||| ||||||| | |||||  ||||||||| || ||||||||||||||    
T  23000307 tgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 26457759 - 26457690
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||| ||| ||| |||||| ||||||| |||| || || ||||  ||||||||||||||||    
T  26457759 tttttacacaagaaactctttttaagacctgaacccatgacctttcaatcacgcgacaacaactttaccg 26457690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 5648306 - 5648219
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  5648306 ctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 5648219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 6430713 - 6430800
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  6430713 ctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 6430800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 16408694 - 16408777
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtt 104  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||    
T  16408694 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 48598915 - 48598998
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  48598915 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 48598998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 17315387 - 17315473
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||  |||||| | || ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  17315387 tgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 17315473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 21647008 - 21646923
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttat 106  Q
    |||||||||||||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||| |||| |||||||||||    
T  21647008 tttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttat 21646923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 14590881 - 14590797
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||||| |||||||| ||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  14590881 tttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 14590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 16911602 - 16911522
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||||||    
T  16911602 tacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggtta 16911522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 5306755 - 5306838
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || ||||||||||||| |||||||||| |||| ||||||||||    
T  5306755 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggtta 5306838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 11054238 - 11054321
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||  | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||| ||||    
T  11054238 ttttacacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagtta 11054321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 30639427 - 30639340
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||| ||||| || |||||||| ||||||||||||||| |||| ||||||||||    
T  30639427 ctgtttttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggtta 30639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 40915875 - 40915805
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||||| ||||||| | |||||||||||||||| ||| |||||||||||||||||||||||    
T  40915875 tgtttttacacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttacc 40915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 14983878 - 14983794
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| |||||||||| ||||||| || || ||| ||||||||||||||||| ||| |||||||||||    
T  14983878 tttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttaccagttctgccaaggtta 14983794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 42164236 - 42164308
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||||||  |||||| |||||||||||||||||| || ||||||||||||||||| |||||||    
T  42164236 ctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttaccg 42164308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 54730293 - 54730209
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||   ||||||||||||||||||||||| ||| ||||| ||||    
T  54730293 tttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagtta 54730209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 20225027 - 20224944
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||  |||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  20225027 ttttacacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 20224944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 47528620 - 47528703
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||| ||||  |||||||||    
T  47528620 ttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggtta 47528703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 487230 - 487295
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||  |||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccg 487295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 23501812 - 23501753
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 23501753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 35567214 - 35567145
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||| | ||||||| ||||||||||||| |||| || |||| ||||||||||||||||||||    
T  35567214 tttttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttaccg 35567145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 47441621 - 47441690
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||| ||||||||||||||  |||||||||| ||||| || ||||||| |||||||||||||||||    
T  47441621 tttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaactttaccg 47441690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 54640430 - 54640499
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| |||||||||||||||||| || ||| ||| ||||||||| |||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttaccg 54640499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 30352682 - 30352766
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | ||||  |||||||||| || | ||||| |||||||||||||||| |||| ||||||||||    
T  30352682 tttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggtta 30352766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 23580299 - 23580365
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    |||||||||||||| || ||||||  ||||||||||||||| || ||||||| ||||||||||||||    
T  23580299 tttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 39077886 - 39077948
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaact 84  Q
    ||||||||||||| ||||||| | |||||||||||||||| || || ||||||||||||||||    
T  39077886 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 49938680 - 49938746
Alignment:
Q  20 gtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    ||||||||||||||| ||||||| | |||||||||| ||||| || ||||||| |||||||||||||    
T  49938680 gtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 10660448 - 10660364
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||| |||||  |||||| | |||||||||  || || || |||||||||||||||||||||||| |||| ||||||||||    
T  10660448 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 10660364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 10874593 - 10874509
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||| |||||  |||||| | |||||||||  || || || |||||||||||||||||||||||| |||| ||||||||||    
T  10874593 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 10874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 37494895 - 37494811
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| | |||||||||| ||||| || ||||| |||| ||||||||||||| ||||  |||||||||    
T  37494895 tttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggtta 37494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 44363223 - 44363291
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||| ||| ||||||  | ||||||||| |||||| || ||||||||||||||||||||||||    
T  44363223 tttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 44363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 54175111 - 54175043
Alignment:
Q  18 ctgtttttacacaagagactgttt-ctaagacttgaacccgtgacgttacagtcacatgacaacaactt 85  Q
    ||||||||||||||||| |||||| | | |||||||| ||||||| || ||||||||||||||||||||    
T  54175111 ctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 55766561 - 55766641
Alignment:
Q  26 acacaagagactgtttctaagacttgaaccc-gtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||| |||||||| || |||||||||| ||||| || | |||||||||||||||||||||| |||| | ||||||||    
T  55766561 acacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggtta 55766641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 55830816 - 55830896
Alignment:
Q  26 acacaagagactgtttctaagacttgaac-ccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| || |||||||| ||||||| || |  ||||||||||||||||||||| |||| | ||||||||    
T  55830816 acacaagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgtcaaggtta 55830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 17043486 - 17043549
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactt 85  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || ||||||| ||||||||||||    
T  17043486 ttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 30496413 - 30496476
Alignment:
Q  23 tttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    |||||||||||| ||||||| | ||||||||| |||||| || ||||||| |||||||||||||    
T  30496413 tttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 25463166 - 25463108
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaa 79  Q
    ||||||||||||||  |||||| | |||||||||||||||| || ||||||||||||||    
T  25463166 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 30690274 - 30690340
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    |||||||||||||| || |||| | |||||||||||||||| || ||||||| ||||||| ||||||    
T  30690274 tttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 7385567 - 7385628
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaa 82  Q
    |||||||||| ||| ||||||| | | |||||||||||||| || |||||||||||||||||    
T  7385567 tttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 12257688 - 12257753
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||  ||||||||| || ||||||||||||| || || |||| |||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttaccg 12257753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 39029152 - 39029221
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| ||| ||||||||  |||| ||  ||||||| ||||||||||||||||    
T  39029152 tttttacacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaactttaccg 39029221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  24 ttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||  ||||||   |||||||||||||||| || ||||||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 5313113 - 5313169
Alignment:
Q  49 ttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| || || ||||||||||||||||||||| |||  ||||||||||    
T  5313113 ttgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggtta 5313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 19027892 - 19027824
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||   |||||| | |||||||||||||||| || ||||||| ||||||||||| ||||    
T  19027892 tttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacc 19027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 25343231 - 25343163
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||||| |||| |  ||||||||| ||||| |  ||||||| ||||||||||||||||    
T  25343231 tttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacc 25343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 41018885 - 41018945
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaa 82  Q
    |||||||||||||  |||||| | |||||||||||||||| || ||||||| |||||||||    
T  41018885 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 3580951 - 3580994
Alignment:
Q  45 agacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||| |||||| || |||||||||||||||||||||||    
T  3580951 agacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 13256513 - 13256572
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||  |||| || |||||||||||||||||||||||| ||||  |||||||||    
T  13256513 gacttgaacctatgaccttccagtcacatgacaacaactttaccagttgcaccaaggtta 13256572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 20405104 - 20405053
Alignment:
Q  54 cccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||| || |||||||||||||||||||||||| |||| | ||||||||    
T  20405104 cccgtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggtta 20405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 54967065 - 54966983
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtt 104  Q
    ||||||||||||||  | |||| |  ||||||||  ||||| || |||||||||||||||||||||||| |||| |||||||||    
T  54967065 tttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 54966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 8473716 - 8473790
Alignment:
Q  26 acacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaa 100  Q
    ||||||||| ||||||| | ||||||||||||  || || | |||| ||||||||||||||||| |||| |||||    
T  8473716 acacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 32629356 - 32629418
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaac 80  Q
    ||||||||  ||||||| ||||||| | || ||||||||||||| || |||||||||||||||    
T  32629356 ctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 9832403 - 9832468
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    ||||||||||||| ||||||  | |||||||||||||||| || |||||| || ||||||| ||||    
T  9832403 ttttacacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 18969738 - 18969701
Alignment:
Q  68 gtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggtta 18969701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 32478873 - 32478942
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    |||||||||||| ||||  |||||| | |||||||||| ||||| |  | ||||||||||||||||||||    
T  32478873 ctgtttttacactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 36589787 - 36589719
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| | |||||||||| | |||||| ||||||  ||||| |||||||||||    
T  36589787 tttttacacaagaggctgtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttaccg 36589719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 20908774 - 20908809
Alignment:
Q  66 cagtcacatgacaacaactttaccggttgtgccaagg 102  Q
    |||||||||||||||||||||||| ||||||||||||    
T  20908774 cagtcacatgacaacaactttacc-gttgtgccaagg 20908809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 49938526 - 49938594
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    |||||||||||||| |  ||| ||| |||||||||| | ||||| || ||||||| |||||||||||||    
T  49938526 ctgtttttacacaatacgctgcttccaagacttgaatctgtgacctttcagtcacgtgacaacaacttt 49938594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 50856344 - 50856396
Alignment:
Q  38 gtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||| |||||||||||||||| || || |||  |||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttaccg 50856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 25079809 - 25079893
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  25079809 tttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 25079893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 7214577 - 7214494
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||| ||||||||||||| |||| || |||||||||||||||||||||||| |||||||||| ||||    
T  7214577 ttttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagtta 7214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 12024006 - 12024093
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  12024006 ctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 12024093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 25249825 - 25249912
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  25249825 ctgtttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggtta 25249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 8455408 - 8455491
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  8455408 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 8455491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 11514480 - 11514396
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | || ||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  11514480 tttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 11514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 14530362 - 14530278
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  14530362 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 14530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 24200716 - 24200789
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||    
T  24200716 tttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttg 24200789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 9671224 - 9671140
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttac-agtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | || ||||||||||||| || | |||||||||||||||||||||||||||| ||||||||||    
T  9671224 ttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggtta 9671140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 10543742 - 10543658
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| | ||||| | |||||||||||||||| || |||||||||||||||||||||| | |||| ||||||||||    
T  10543742 tttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggtta 10543658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 21779351 - 21779434
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| |||| || | |||||||||||||||| || |||||||||||||||||||| ||| |||| ||||||||||    
T  21779351 ttttacacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggtta 21779434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 23397809 - 23397726
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | ||||||||||| |||| || |||||||||||||||||||||||| ||||  |||||||||    
T  23397809 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggtta 23397726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 5841072 - 5841006
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    ||||||||||| || ||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  5841072 tttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 17623608 - 17623531
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgcc 98  Q
    ||||||||||||||  |||||| | |||||||||||||||| || ||||| |||||||||||||||||| ||||||||    
T  17623608 tttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttgtgcc 17623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 17705547 - 17705455
Alignment:
Q  14 tactctgtt-tttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||| |||||||||||| | ||||| | |||||||||||||||| ||  ||||||||||||||||||||||| ||||  |||||||||    
T  17705547 tactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggtta 17705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 17896303 - 17896219
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||||| |||||||| ||||||| || | |||||||||||||||||||||| |||| | ||||||||    
T  17896303 tttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggtta 17896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 22371102 - 22371017
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||  ||| ||||||| | |||||||||||||||| |  |||||||||||||||||||||||| |||| ||||||||||    
T  22371102 ctgtttttacac--gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggtta 22371017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 17668046 - 17667971
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtg 96  Q
    ||||||||||||||  | |||| | |||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  17668046 tttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgtg 17667971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 21377164 - 21377233
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||  |||||||| ||||||||| ||| || || |||||||||||||||||||||||||    
T  21377164 tttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttaccg 21377233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 44604901 - 44604832
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    |||||||||||||||||  |||||| | |||||||||| ||||| || ||||||||||||||||||||||    
T  44604901 ctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 99361 - 99421
Alignment:
Q  28 acaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    ||||||| ||||||||| |||||||||||||||| || ||||||| |||||||||||||||    
T  99361 acaagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 40416962 - 40417030
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||| |||||||  |||||| | |||||||||||||||| || ||||||||||||||||||||||||    
T  40416962 tttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacc 40417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 17380324 - 17380391
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactt 85  Q
    |||||| ||||||||||  |||||| |||||||||||||||||| || | ||||||||||||||||||    
T  17380324 ctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 45235910 - 45235981
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggtt 93  Q
    ||||||| ||||||||||||||| ||||||||| |||||  || ||||||||||| ||||||||||| ||||    
T  45235910 ttttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttactggtt 45235981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 5450329 - 5450263
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    ||||||||||||||  |||||| | || ||||||||||||| || ||||||||||||||||||||||    
T  5450329 tttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 27573667 - 27573581
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||| |||||||||| ||||| |   ||||||||||  |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  27573667 tgtttatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 23145789 - 23145858
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||  |||||||||||||||||| || |||||||   |||||||||||||||    
T  23145789 tttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttaccg 23145858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 23557579 - 23557648
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||  |||||||||||||||||| || |||||||   |||||||||||||||    
T  23557579 tttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttaccg 23557648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 44521464 - 44521533
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||| |||||| |||| |||||| |||||| || ||||||| ||| |||||||||||||    
T  44521464 tttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaactttaccg 44521533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 14444776 - 14444720
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacat 74  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||    
T  14444776 ctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 19977805 - 19977889
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||| ||||| ||||||| |  ||||||||||||||| || | |||||||||||||||||| ||| |||  ||||||||||    
T  19977805 tttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggtta 19977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 39914397 - 39914465
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||  |||||| |  |||||| |||||||| || ||||||||||||||||||||||||    
T  39914397 tttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttacc 39914465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 31158532 - 31158598
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    ||||||| |||||| ||||||  ||||||| ||||| |||| || ||||||||||||||||||||||    
T  31158532 tttttacgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 4516442 - 4516511
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| |||||||||  |||||||   ||||| || ||||||| |||||||||||||||||    
T  4516442 tttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttaccg 4516511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 29419980 - 29420049
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||  |||||| | ||||||||| |||||| || ||||||  |||||||||||||||||    
T  29419980 tttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttaccg 29420049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 39189557 - 39189596
Alignment:
Q  66 cagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  39189557 cagtcacatgacaacaactttaccagttgcgccaaggtta 39189596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 17473015 - 17472949
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    ||||||||||| || || |||||||||| |||||||||||| || || |||  ||||||||||||||    
T  17473015 tttttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaacttta 17472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 24860075 - 24860157
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaag 101  Q
    ||||||||||| ||||  |||||| | | ||| ||||||| || || ||||||||||||||||| |||||| |||| ||||||    
T  24860075 tgtttttacaccagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 25641549 - 25641487
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaac 80  Q
    ||||||| |||||| |  ||||||| | |||||||||||||||| || |||||||||||||||    
T  25641549 ctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 33795329 - 33795260
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||| ||||||  ||||||   |||||||||||||||| || || |||| |||||||||||||||||    
T  33795329 tttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgacaacaactttaccg 33795260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 14544103 - 14544023
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| ||||||| |  || || ||| || || || ||||||||||||||||||||||||  ||| ||||||||||    
T  14544103 tacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggtta 14544023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 17471592 - 17471552
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgac 61  Q
    |||||||||||||| |||||||| ||||||||||| |||||    
T  17471592 tttttacacaagaggctgtttctgagacttgaacctgtgac 17471552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 46248044 - 46248128
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  46248044 tttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggtta 46248128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 27474351 - 27474264
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||||| |||| || |||||||    
T  27474351 ctgtttttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggtta 27474264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 30395819 - 30395903
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||||    
T  30395819 tttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 32632644 - 32632731
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||| ||||||||||||||||| |||| ||||||||||    
T  32632644 ctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggtta 32632731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 34725188 - 34725271
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  34725188 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 34725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 14617103 - 14617021
Alignment:
Q  23 tttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||| ||||||| | ||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  14617103 tttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 14617021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 41319897 - 41319981
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||||||||| | ||||| |||| ||||| || |||||||||||||||||||||||| |||||| ||||||||    
T  41319897 tttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggtta 41319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 22930155 - 22930242
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| || ||||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  22930155 ctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 22930242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 33223054 - 33222971
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaag 101  Q
    ||||||||||||||||| ||||||| | ||||| || ||||||| || ||||||||||||||||||||||||||||| ||||||    
T  33223054 ctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 38478372 - 38478455
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||| |||||  |||| ||||||||||    
T  38478372 ttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggtta 38478455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 47214577 - 47214494
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||| ||||||||||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||| ||||    
T  47214577 ttttaaacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagtta 47214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 18724636 - 18724705
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||||    
T  18724636 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccg 18724705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 23768411 - 23768484
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||||||| ||||||| | |||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  23768411 tttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttg 23768484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 18944710 - 18944626
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | | |||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  18944710 tttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 18944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 20004183 - 20004267
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||| |||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||  |||||||||    
T  20004183 tttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggtta 20004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 46991871 - 46991787
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||  |||||||||    
T  46991871 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggtta 46991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 25290232 - 25290146
Alignment:
Q  21 tttttacacaagagactgt--ttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||  ||| ||||||||||| |||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  25290232 tttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggtta 25290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 45402164 - 45402078
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | ||||||||||||| || || || ||||||||||||||||||||| |||| ||||||||||    
T  45402164 ctgtttttacacaagaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaaggtta 45402078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 45812627 - 45812710
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||  | |||||||||| ||||| || |||||||||||||||||||||| | |||| ||||||||||    
T  45812627 ttttacacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggtta 45812710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 4430117 - 4430185
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||| |||||||  ||||||| |||||||||| || ||||||||||||||||||||||||    
T  4430117 tttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactttacc 4430185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 6925167 - 6925099
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||| || |||| | |||||||||||||||| || ||||||||||||||||||||||||    
T  6925167 tttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 6925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 11596583 - 11596511
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||||||  |||||||| |||||||||||||||| || ||||||||||||| | |||||||||    
T  11596583 ctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagccactttaccg 11596511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 34714678 - 34714606
Alignment:
Q  33 agactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| | |||||||||||||||| || || ||||||||||||||||||||| |||| ||||||||||    
T  34714678 agactgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggtta 34714606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 20036285 - 20036219
Alignment:
Q  23 tttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||  |||||| | |||||||||||||||| || ||||||||||||||||||||||||    
T  20036285 tttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 10668292 - 10668203
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacag-----tcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||     ||||||||||||||||||||| |||| ||||||||||    
T  10668292 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggtta 10668203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 17470437 - 17470506
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||||| ||||||||||| ||||  | ||||||| |||||||||||||||||    
T  17470437 tttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttaccg 17470506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 18742051 - 18742136
Alignment:
Q  21 tttttacacaagagactgtttct-aagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| |||| ||||||||||  |||| |||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  18742051 tttttatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 18742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 35117860 - 35117928
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||| || |||| | |||||||||||||||| || ||||||| |||||||||||||||||    
T  35117860 ttttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 35117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 19414505 - 19414438
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||| ||||| || |||||| |||||||||||||||| || |||||| |||||||||||||||||    
T  19414505 ttttacataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 19414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 27201709 - 27201646
Alignment:
Q  26 acacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||| ||||||| | ||||||||||| |||| || ||||||||||||||||||||||||    
T  27201709 acacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 27201646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 40424784 - 40424725
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| | || |||||||||||||||||||||||| |||| ||||||||||    
T  40424784 gacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggtta 40424725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9939521 - 9939443
Alignment:
Q  28 acaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaac-tttaccggttgtgccaaggtta 105  Q
    |||||||  |||||| | ||||||||| |||||| || |||||||||||||||||| ||||||||||| ||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 2435878 - 2435947
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||| ||||| ||| ||||||| | |||||||||||||||| || ||||||| |||||||||||||||||    
T  2435878 ttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 2435947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 2435984 - 2436053
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||| |||  |||||| | |||||||||||||||| || ||||||| |||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 2436053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 22327166 - 22327101
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    ||||||||||||||  |||||| | |||||||||||| ||| || |||||||||||||||||||||    
T  22327166 tttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 52910284 - 52910215
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||  ||||| ||||||| |||| ||||||| ||||| || |||||||||||||||||||||||||    
T  52910284 tttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttaccg 52910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 8197110 - 8197026
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| |  || | | |||||||||||||||| || |||||||||||||||||||| ||| ||||  |||||||||    
T  8197110 tttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggtta 8197026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 19932869 - 19932925
Alignment:
Q  47 acttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggt 103  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 19932925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 19701637 - 19701570
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||||||| ||||||  | ||||| |||||||||| || |||||||| ||||||||||||||    
T  19701637 tttttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 25468354 - 25468421
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    ||||||||||||||  |||||| | ||||||||||| |||| || || ||||||||||||||||||||    
T  25468354 tttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 24564411 - 24564327
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| |||||||||| | | ||| || || ||||| |||| ||||||||| ||||| ||||||||||    
T  24564411 tttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatcacaagacatcaactttactggttgcgccaaggtta 24564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 50760321 - 50760385
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||| ||||||  | |||||||||||||||| |  ||||||||||||||| ||||||||    
T  50760321 tacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 12126927 - 12127010
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||  ||||||| |  |||| |||||||||| || || | ||||||||||||||||||  |||| ||||||||||    
T  12126927 ttttacacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 21723686 - 21723647
Alignment:
Q  66 cagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  21723686 cagtcacatgacaacaactttaccagttgtgcgaaggtta 21723647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 35005190 - 35005139
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcac 72  Q
    |||||||||||||| ||||||  |||||||||||||||||| || |||||||    
T  35005190 tttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22324963 - 22324925
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaaccc 56  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  22324963 ctgtttttacacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 6983915 - 6983968
Alignment:
Q  36 ctgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||| | |||||||||| ||||| || ||||||| ||||||||||||||||    
T  6983915 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacc 6983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 50812006 - 50811937
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||  ||||||| | ||| |||  ||||||| || ||||||| |||||||||||||||||    
T  50812006 tttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttaccg 50811937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 10378841 - 10378885
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||| || || ||||||| |||||||||||||||||    
T  10378841 gacttgaacccgtaacctttcagtcacgtgacaacaactttaccg 10378885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 18335379 - 18335463
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||||||||||| | ||||| |||  ||||| || ||| |||||||||| ||||||| |  ||| ||||||||||    
T  18335379 tttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaaaaactttatcacttgcgccaaggtta 18335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 35253277 - 35253329
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacat 74  Q
    ||||||||||||| ||||||| | |||||||||||||||  || |||||||||    
T  35253277 ttttacacaagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 41014366 - 41014279
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  41014366 ctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 41014279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 22861758 - 22861841
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||| |||||||| ||||||| || |||||||||||||||||||||| | |||||||||||||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggtta 22861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 2838826 - 2838738
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgtt-acagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||  |||||||| |||||||| | |||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  2838826 ctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaactttaccggttgcgccaaggtta 2838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 4619197 - 4619281
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| || |||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  4619197 tttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 4619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 24448934 - 24448850
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||| || ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  24448934 tttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 24448850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 38879625 - 38879541
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  38879625 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 38879541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 43334246 - 43334162
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| ||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  43334246 tttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 43334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 35710356 - 35710273
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||| ||||||||||||||||||| |||| ||||||||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggtta 35710273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 37024646 - 37024729
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||  |||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggtta 37024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 23974824 - 23974741
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggtta 23974741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 27328796 - 27328728
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||||||||||| | |||||||||| ||||| || ||||||||||||||||||||||||    
T  27328796 tttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 27328728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 8170074 - 8170157
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| || ||||||| | |||||||||||||||| || | |||||||||||||||||||||| |||| ||||||||||    
T  8170074 ttttacacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 1565475 - 1565391
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| ||||||  |||||| | |||||||||||| ||| || |||||||||||||||||||||||| |||| ||||||||||    
T  1565475 tttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 1565391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 28516525 - 28516594
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||  |||||| |||||||||||||||||| || ||| ||| |||||||||||||||||    
T  28516525 tttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttaccg 28516594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 22907948 - 22908014
Alignment:
Q  14 tactctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaac 80  Q
    ||||||||||||||||||||| ||||||||  ||||||||||| |||| || ||||||||| |||||    
T  22907948 tactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 39301163 - 39301098
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||  |||| | |||||||||||||||||| || |||| ||||||||||||||||||||    
T  39301163 tacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttaccg 39301098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 22187329 - 22187245
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | ||||| |||| ||||| || |||||| ||||||||||||||||  |||| ||||| ||||    
T  22187329 tttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagtta 22187245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 32703467 - 32703411
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgaca 78  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||    
T  32703467 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 31299679 - 31299592
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| | ||||||| ||||||||| |||||||||  ||||| |   ||||||||||||||||||||||| ||||  |||||||||    
T  31299679 ctgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccagttgcaccaaggtta 31299592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 39079875 - 39079926
Alignment:
Q  39 tttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||| |||||||||||||||||| || | |||||||||||||||||||||||    
T  39079875 tttccaagacttgaacccgtgacctttctgtcacatgacaacaactttaccg 39079926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 209015 - 209087
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||||||  |||| | | |||||||||  ||||| ||  ||||||||||||||||||||||||    
T  209015 ctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttaccg 209087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 1850688 - 1850624
Alignment:
Q  17 tctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaaca 81  Q
    ||||||||||||||||||  | ||||   |||||||||||||||| || ||||||||||||||||    
T  1850688 tctgtttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 34074653 - 34074717
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactt 85  Q
    |||||||||||||| ||||||||| |||||||||  ||||| || ||||||  ||||||||||||    
T  34074653 tttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 22600497 - 22600430
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||| | | |||||| | ||||||||||||| || || ||||||||||| ||||||||||||    
T  22600497 ttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaactttacc 22600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 10634253 - 10634306
Alignment:
Q  37 tgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||| ||||||||||| |||| || ||||||| |||||||||||| ||||    
T  10634253 tgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcaccg 10634306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 31362454 - 31362494
Alignment:
Q  49 ttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||| || || |||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacc 31362494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 10870039 - 10870126
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  10870039 ctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 10870126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 16735510 - 16735423
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||  ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  16735510 ctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggtta 16735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 22609835 - 22609749
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||    
T  22609835 ctgtttttacacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggtta 22609749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 8247780 - 8247864
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  8247780 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 8247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 13730695 - 13730779
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  13730695 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 13730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 7696977 - 7697060
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||| | |||||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||||||    
T  7696977 ttttacacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggtta 7697060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 46421128 - 46421212
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||||||    
T  46421128 tttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggtta 46421212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 52926305 - 52926385
Alignment:
Q  25 tacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  52926305 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 52926385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 39203581 - 39203498
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||  |||||||||||||||    
T  39203581 ttttacacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggtta 39203498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 13628886 - 13628968
Alignment:
Q  24 ttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaac-tttaccggttgtgccaaggtta 105  Q
    ||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||| |||||| |||||||||||||||    
T  13628886 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggtta 13628968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 40272903 - 40272987
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  40272903 tttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 40272987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 1217155 - 1217072
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||| ||||||| ||||||||||| |||| ||||||||||    
T  1217155 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggtta 1217072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 22123007 - 22123090
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||| | |||||||||||| ||| || ||||||||||||||||| |||||| || | ||||||||||    
T  22123007 ttttacacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaaggtta 22123090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 5173804 - 5173876
Alignment:
Q  14 tactctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttt 86  Q
    |||| ||||||||||||||||  |||||| | |||||||||||||||| || |||||||||||||||||||||    
T  5173804 tactttgtttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 26869776 - 26869700
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||||| |||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||| ||||    
T  26869776 ctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 26869700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 29366813 - 29366897
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| ||  ||||||||||||||||||||||| |||  ||||||||||    
T  29366813 tttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggtta 29366897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 6411909 - 6411996
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||| ||||||  ||||||||||||| |||| |  |||| ||||||||||||||||||| |||| | ||||||||    
T  6411909 ctgtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaaggtta 6411996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 34420735 - 34420802
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||||||| ||||||| | |||||||||||||||| || ||||||| |||||||||||||||    
T  34420735 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 26573193 - 26573124
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||| ||| ||||||| | |||||||||||||||| || ||||||| |||||||||||||||||    
T  26573193 tttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 26573124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 30928238 - 30928307
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||| ||||| ||||    
T  30928238 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaacttgaccg 30928307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 45620920 - 45620989
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| |  ||||||||||||||| || ||||||| |||||||||||||||||    
T  45620920 tttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 45620989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 4495755 - 4495839
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||| || || |||  | |||||||||||||||| || |||||||||||||||||||||||| |||| || |||||||    
T  4495755 tttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggtta 4495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 9607269 - 9607185
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| |||||| ||||||| | ||||||||||  |||| || |||||||||||||||||||||||  |||| ||||||||||    
T  9607269 tttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaaggtta 9607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 12914126 - 12914210
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||||||||  ||||| || | ||||||| |||||||||||||| |||| ||||||||||    
T  12914126 tttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggtta 12914210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 53062115 - 53062035
Alignment:
Q  11 ttatactctgttttt-acacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||| |||||||| ||||| ||| ||||||| | ||||||||| |||||| || |||||||||||||||||||||||||    
T  53062115 ttataccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttaccg 53062035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 516475 - 516417
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaa 79  Q
    |||||||||||||| ||||||| | |||||||||||||||| || ||||||||||||||    
T  516475 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 25517300 - 25517349
Alignment:
Q  57 gtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttat 106  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||    
T  25517300 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttat 25517349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 35417982 - 35417913
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    |||||||||||||| ||||||| | || |||||| |||||| |  ||||||||||| |||||||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttaccg 35417913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 53996657 - 53996726
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||  |||||| | ||||||||| |||||| || |||||| |||||||||| |||||||    
T  53996657 tttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttaccg 53996726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 26782432 - 26782364
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||| |||||| | |||||||| ||||||| || || || |||||||| |||||||||    
T  26782432 tttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttacc 26782364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 7943056 - 7942993
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaact 84  Q
    |||||| ||||||  ||||||| | |||||||| ||||||| || |||||||||||||||||||    
T  7943056 tttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 25944535 - 25944468
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    ||||||||| |||| | ||||| | ||||||||||| |||| || ||||||| |||||||||||||||    
T  25944535 tttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 54032650 - 54032705
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatga 76  Q
    ||||||||||||||  |||||| | |||||||||||||||| || |||||||||||    
T  54032650 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 12525473 - 12525392
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| ||||||| | |||| ||||| ||||| || |||||| |||   ||||||||||| |||| ||||||||||    
T  12525473 tttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgccaaggtta 12525392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33926152 - 33926094
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatga 76  Q
    ||||||||||||||||| || |||| | ||||||||||| |||| || |||||||||||    
T  33926152 ctgtttttacacaagaggctatttccaggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 45139570 - 45139624
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatga 76  Q
    |||||||||||||  |||||| || ||||||||||||||| || |||||||||||    
T  45139570 ttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 4537082 - 4537013
Alignment:
Q  36 ctgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| || |||| |||||||||| || || ||||||||| ||||| |||||| || |||||||||||    
T  4537082 ctgtttccaaaacttaaacccgtgacctttcaatcacatgaccacaacattaccgattatgccaaggtta 4537013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 28905008 - 28904940
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccg 90  Q
    ||||||||||||||||||| |   ||||| |||  ||||| ||  ||||||||||||||||||||||||    
T  28905008 ttttacacaagagactgttccctggacttaaacatgtgactttttagtcacatgacaacaactttaccg 28904940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 14975171 - 14975256
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttat 106  Q
    |||||||||||||| ||||||| | |||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttat 14975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 12222008 - 12222088
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaag 101  Q
    |||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||    
T  12222008 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 9161174 - 9161083
Alignment:
Q  14 tactctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||||||||| ||||||| | |||||||||| ||||| || ||||||||||||||||||||||||| ||| | ||||||||    
T  9161174 tactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggtta 9161083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 3815168 - 3815252
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||| || ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  3815168 tttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggtta 3815252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 1347007 - 1346924
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||| | ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  1347007 ttttacacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 1346924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 1354847 - 1354930
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  1354847 ttttacacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 1354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 29355951 - 29356033
Alignment:
Q  24 ttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaa-ctttaccggttgtgccaaggtta 105  Q
    ||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||  |||||| |||||||||||||||    
T  29355951 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggtta 29356033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 8409287 - 8409203
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| | ||||| | |||||||| ||||||| || ||||||||| |||||||||||||| |||| ||||||||||    
T  8409287 tttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgccaaggtta 8409203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 33922936 - 33923003
Alignment:
Q  38 gtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| |||||||||| ||||| || |||||| |||||||||||||||||||||| ||||||||||    
T  33922936 gtttctaggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggtta 33923003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 6024277 - 6024204
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||||||| ||||||||| || ||||| ||||||| || || ||||||||||||||||||||| ||||    
T  6024277 tttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttg 6024204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 20400711 - 20400627
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||| |||||| |  ||||||||| ||||| || ||||||||||||||||||| ||||  ||| ||||||||||    
T  20400711 tttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaaggtta 20400627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 2166504 - 2166570
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||||||  |||||| | |||||||||||||||| || ||||||||| |||||||||||||    
T  2166504 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 2178137 - 2178203
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||||||  |||||| | |||||||||||||||| || ||||||||| |||||||||||||    
T  2178137 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 12889470 - 12889390
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaagg 102  Q
    |||| ||||||||| ||||||  |||||||||||| ||||| || || |||| |||||||||||||||| ||||||||||||    
T  12889470 ttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc-gttgtgccaagg 12889390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 12063511 - 12063427
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| || |||||| |||||||||||||||| || ||||| ||||| |||||||||| | ||||  |||||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggtta 12063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 13905070 - 13905152
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtt 104  Q
    ||||||||||||||   ||||  | ||||||| |||||||| || |||||||||||||||||||||||| |||| |||||||||    
T  13905070 tttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 13905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 8417504 - 8417443
Alignment:
Q  33 agactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||| | ||| ||||| |||||| || |||||||||||||||||||||||| ||||    
T  8417504 agactgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttg 8417443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 15866128 - 15866212
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||  ||||| ||||||| | || |||||||| |||| || || ||||||| ||||||||||||| |||| ||||||||||    
T  15866128 tttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttaccagttgggccaaggtta 15866212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 24734677 - 24734593
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||| | || ||||||   |||| || |||||||||||||||||||||||| |||| ||||| ||||    
T  24734677 tttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgccaatgtta 24734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 18277284 - 18277343
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaac 80  Q
    |||||||||||||| ||||||| |||| ||||||||||||| ||  ||||||| ||||||    
T  18277284 tttttacacaagaggctgtttccaagatttgaacccgtgaccttttagtcacaggacaac 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 32728247 - 32728314
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||| |||||  |||||| || ||||||| | ||||| || |||||||||||||||||||||||    
T  32728247 tttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 22967215 - 22967149
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    |||||||||||||   |||||| | |||||||||  ||||| ||||||||||||||||| |||||||    
T  22967215 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataacttta 22967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 23821178 - 23821244
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaacttta 87  Q
    |||||||||||||   |||||| | |||||||||  ||||| ||||||||||||||||| |||||||    
T  23821178 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataacttta 23821244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 14553555 - 14553483
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||||||  || |||| | |||||||||| ||||| ||  ||||||||||||||||||||||| ||||    
T  14553555 tttttacacaagaagctatttccaggacttgaacctgtgaccttt-agtcacatgacaacaactttaccagttg 14553483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 24097625 - 24097540
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggttat 106  Q
    |||||| ||||||| ||| ||| | ||||| ||| |||||| || |||| |||||||| ||| |||||| ||||||||||| ||||    
T  24097625 tttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttaccagttgtgccaagtttat 24097540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 1941899 - 1941815
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||||  |||||  | ||||| || ||| ||| || |||||| ||||||||||||||||| ||||  |||||||||    
T  1941899 tttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaacaactttaccagttgcaccaaggtta 1941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 13112 - 13198
Alignment:
Q  19 tgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||| |||||| ||||||| | |||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  13112 tgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 13198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 226497 - 226581
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||||| |||||||| ||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  226497 tttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 226581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 10140 - 10223
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| | ||||||||    
T  10140 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 10223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 20468 - 20551
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||||||||| || |||||||||||||||||||||||| |||| | ||||||||    
T  20468 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 20551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 8964 - 8905
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| ||||| || |||||||||||||||||||| |||||||| ||||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggtta 8905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 19292 - 19233
Alignment:
Q  46 gacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||| ||||| || |||||||||||||||||||| |||||||| ||||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggtta 19233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 30622 - 30539
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  30622 ttttacacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 43180 - 43100
Alignment:
Q  14 tactctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    ||||||||||||||||||||| ||||||||| ||| ||||| |||||| || || ||||||||||| ||||||||| ||||    
T  43180 tactctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttg 43100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 83903 - 83835
Alignment:
Q  37 tgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||||||  |||| ||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtta 83835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 11174 - 11093
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtt 104  Q
    ||||||||||||| ||||||| | |||||||||||||||| || ||||||||| | |||||||||||| |||| |||||||||    
T  11174 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 24693 - 24624
Alignment:
Q  36 ctgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    ||||||| | |||||||||||||||| |||||||||| |||||||||||||| |  ||||||||||||||    
T  24693 ctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggtta 24624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 24863 - 24942
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||||||||||| |||||     ||||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||    
T  24863 tttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 24942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 46875 - 46794
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaagg 102  Q
    ||||||||||||||  |||||| |  ||||||||||||||| ||  |||||||||||||||||||||||  ||| |||||||    
T  46875 tttttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 59021 - 58937
Alignment:
Q  21 tttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggtta 105  Q
    |||||| ||||||| ||||||| | |||||||||||||||| || |||||||||||||| || |||||| ||||  |||||||||    
T  59021 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggtta 58937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 8938 - 8867
Alignment:
Q  18 ctgtttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    ||||||||||||||||   |||||| | || ||||||| ||||| |||||||||||||||||||||||||||    
T  8938 ctgtttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacc 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 4200 - 4134
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttac 88  Q
    |||||||||||||  |||||| | |||||||||||||||| || ||||||||| |||||||||||||    
T  4200 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 35114 - 35167
Alignment:
Q  26 acacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaa 79  Q
    ||||||||||||||||  | |||||||||||||||| |||||||||||||||||    
T  35114 acacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaa 35167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 1677 - 1744
Alignment:
Q  22 ttttacacaagagactgtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttacc 89  Q
    |||||||||||||  |||||  | ||||||||||| |||| || ||||||||||||||||||||||||    
T  1677 ttttacacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 10827 - 10781
Alignment:
Q  48 cttgaacccgtgacgttacagtcacatgacaacaactttaccggttg 94  Q
    |||||||||||||| || |||||||||||||||||||||||| ||||    
T  10827 cttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 72958 - 73034
Alignment:
Q  21 tttttacacaagagact-gtttctaagacttgaacccgtgacgttacagtcacatgacaacaactttaccggttgtgccaaggt 103  Q
    ||||||||||||||||| ||||||| ||||||||||||||||        |||||||||||||||||||| |||| ||||||||    
T  72958 tttttacacaagagacttgtttctaggacttgaacccgtgac-------acacatgacaacaactttaccagttgcgccaaggt 73034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University