View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_108 (Length: 239)
Name: NF2014_low_108
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_108 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29648682 - 29648460
Alignment:
| Q |
1 |
tttgactctactcacaaaagggtattcctatgcacaagttcaattcctccttggcctactttttctggtaattaagttgttgattttgtacattgcatca |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29648682 |
tttgactctactcacaaaagggtattcctatgcacaagttcaattcctccttggcctactttttctggtaattaagttgttgattttgtacattgcatca |
29648583 |
T |
|
| Q |
101 |
acttgattttgtaagtttgatggtataaaaaagttttacacatgcattcaatcgtatctcgtcatgatacaagaaatgtaaaatcttatttgttgcatgt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |
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|
| T |
29648582 |
acttgattttgtaagtttgatggtataaaaaagttttacacatgcattcaatcgtatctcgtcatgatacaagaaatgtaacatcttatttattgtatgt |
29648483 |
T |
|
| Q |
201 |
acaggccttcttactattacttg |
223 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
29648482 |
gcaggccttcttactattacttg |
29648460 |
T |
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