View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_135 (Length: 202)
Name: NF2014_low_135
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_135 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 38277982 - 38277812
Alignment:
| Q |
18 |
aaaacgacaactaaaaacaattagtgtaatatttcttttttacaagaattagtgtaatatatgatattgttacttggaggagaaatcttcagcaatattt |
117 |
Q |
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| T |
38277982 |
aaaacaacaactaaaa-caattagtgtaatatattttttttacaagaattagtgtaatatatgatattgttaattggaggagaaatcttcagcaatattt |
38277884 |
T |
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| Q |
118 |
cattatttagattctcatgttcaccaatttctggtttcttatatgtttgctgcaaatatctgtttagtattt |
189 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38277883 |
cattatttagattctcttgttcaccaatttctggtttcttatatgtttgctgcaaatatctgtttagtattt |
38277812 |
T |
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