View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_43 (Length: 359)
Name: NF2014_low_43
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 13 - 344
Target Start/End: Complemental strand, 2675912 - 2675575
Alignment:
| Q |
13 |
taggcacagttgatacaaccaattaatcaaggagctaactattatttatttacagaaatcaaatgaagttatatttttgaagcatctagttggtacataa |
112 |
Q |
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| T |
2675912 |
taggcacagttgaaacaaccaattaatcaaggagctaactattattaatttacagaaatcaaatgaagttatatttttgaagcatctagttagtacataa |
2675813 |
T |
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| Q |
113 |
tttatgcaagattatattacatagagattacattcaggaacttttgaaataattttaattttattaagaactaatgtgactaaataaga---------ta |
203 |
Q |
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| T |
2675812 |
tttatgcaagattatattacatagagattacattcaggaacttttgaaataattttcatttta-taagaactaatgtgactaaataagatggtccattta |
2675714 |
T |
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| Q |
204 |
actgtttacaaaaatttctttatctttgtacctcattacataactgtcatagacttatagtatctaaggaaattgagtatccaaaatctgcaaagatttg |
303 |
Q |
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| T |
2675713 |
actgtttacaaaaatttctttatctttgtacctcattacataactgtcatagacttatagtatctaaggaaattgagtatccaaaatctgcaaagatttg |
2675614 |
T |
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| Q |
304 |
gcagtaatagacaaatttttacagaagtatgagacataaat |
344 |
Q |
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|||| |||||||||||||||||| |||||||||||||||| |
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| T |
2675613 |
gcag--atagacaaatttttacagcagtatgagacataaat |
2675575 |
T |
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