View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_66 (Length: 296)
Name: NF2014_low_66
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_66 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 6 - 269
Target Start/End: Original strand, 47908941 - 47909206
Alignment:
| Q |
6 |
gtagataatactgaagagtgttgtgg-atgagaaaataaatatatttatgtctgtttatttattgtgctttggcacaattgaaatgtttgtattaagttt |
104 |
Q |
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| T |
47908941 |
gtagacaatactaaaaagtgtcgtgggatgagaaaataaatatatttatgttgttttatttattgtggtttggcacaattgaaatgtttgtattaagttt |
47909040 |
T |
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| Q |
105 |
tagaattaggtccaattataattgaaatgctttattggattgcatatcctcagatatgcatggagacctctcaaataacttcattttcaaaattcaaagt |
204 |
Q |
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| T |
47909041 |
tagaattaggtccaattataattgaaatgccttattggattgcatatcctcagatatgcatagagacctcgcaaataacttcattttcaaaattcaaagt |
47909140 |
T |
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| Q |
205 |
cggtggaatttccattttctactcgc-aaatgttgaataaatttctcattctaataaataaataaa |
269 |
Q |
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| T |
47909141 |
cggtggaatttccattttctactcgcaaaatgttgaataaatttctcattctaataaataaataaa |
47909206 |
T |
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