View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2014_low_69 (Length: 291)

Name: NF2014_low_69
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2014_low_69
NF2014_low_69
[»] chr5 (28 HSPs)
chr5 (173-277)||(29298271-29298374)
chr5 (17-111)||(29307205-29307299)
chr5 (17-112)||(1144508-1144603)
chr5 (209-277)||(29307061-29307129)
chr5 (28-107)||(5369053-5369132)
chr5 (17-112)||(16153363-16153457)
chr5 (17-110)||(8959689-8959782)
chr5 (17-106)||(3463839-3463927)
chr5 (25-112)||(5736257-5736344)
chr5 (17-110)||(28907118-28907210)
chr5 (17-110)||(28943513-28943605)
chr5 (33-96)||(12912327-12912390)
chr5 (35-109)||(32432319-32432393)
chr5 (34-112)||(8506497-8506575)
chr5 (34-104)||(19413207-19413277)
chr5 (33-112)||(30703666-30703745)
chr5 (34-96)||(37522622-37522684)
chr5 (34-95)||(38130150-38130211)
chr5 (36-96)||(41625544-41625604)
chr5 (33-72)||(10153985-10154024)
chr5 (34-92)||(11261921-11261979)
chr5 (34-96)||(34425396-34425458)
chr5 (34-96)||(42273713-42273775)
chr5 (20-65)||(5659584-5659629)
chr5 (35-104)||(25840931-25841000)
chr5 (34-70)||(6686450-6686486)
chr5 (34-70)||(20644080-20644116)
chr5 (33-69)||(31690680-31690716)
[»] chr6 (9 HSPs)
chr6 (17-110)||(4987990-4988083)
chr6 (17-109)||(16524426-16524518)
chr6 (17-110)||(4032034-4032127)
chr6 (17-107)||(16013454-16013544)
chr6 (25-112)||(15830750-15830837)
chr6 (17-108)||(3888474-3888565)
chr6 (33-71)||(5300658-5300696)
chr6 (34-70)||(3095778-3095814)
chr6 (33-77)||(21964018-21964062)
[»] chr8 (30 HSPs)
chr8 (17-112)||(41362325-41362420)
chr8 (17-112)||(4038900-4038994)
chr8 (17-107)||(8673428-8673518)
chr8 (19-111)||(17336791-17336883)
chr8 (17-112)||(38072210-38072305)
chr8 (20-112)||(8745633-8745725)
chr8 (33-112)||(2628182-2628261)
chr8 (17-112)||(17314877-17314972)
chr8 (17-111)||(29147256-29147350)
chr8 (36-96)||(4480841-4480901)
chr8 (33-112)||(17713286-17713365)
chr8 (17-92)||(25195085-25195159)
chr8 (36-111)||(28497157-28497232)
chr8 (34-96)||(7022437-7022499)
chr8 (34-96)||(8711941-8712002)
chr8 (28-74)||(26954448-26954494)
chr8 (34-96)||(36190836-36190898)
chr8 (34-96)||(41086420-41086482)
chr8 (35-96)||(7858593-7858654)
chr8 (36-96)||(43216381-43216441)
chr8 (33-111)||(6401683-6401761)
chr8 (34-96)||(26483596-26483658)
chr8 (34-96)||(31734179-31734241)
chr8 (36-96)||(13143979-13144040)
chr8 (47-112)||(27819736-27819801)
chr8 (35-80)||(33563561-33563606)
chr8 (33-69)||(14576213-14576249)
chr8 (35-75)||(34158346-34158386)
chr8 (34-70)||(34890234-34890270)
chr8 (33-73)||(39187297-39187337)
[»] chr2 (24 HSPs)
chr2 (17-112)||(32010151-32010246)
chr2 (17-108)||(26998366-26998457)
chr2 (17-112)||(44442180-44442276)
chr2 (17-108)||(38071044-38071135)
chr2 (17-104)||(32273720-32273807)
chr2 (25-111)||(4891655-4891742)
chr2 (17-101)||(20380172-20380256)
chr2 (33-107)||(11030951-11031025)
chr2 (34-96)||(14874029-14874091)
chr2 (26-74)||(16494980-16495028)
chr2 (33-95)||(33198664-33198726)
chr2 (34-96)||(45660431-45660493)
chr2 (34-95)||(28858375-28858436)
chr2 (35-92)||(43415468-43415525)
chr2 (34-104)||(25572111-25572181)
chr2 (34-96)||(28599180-28599242)
chr2 (28-78)||(40584448-40584498)
chr2 (33-94)||(8032702-8032763)
chr2 (35-96)||(33677550-33677611)
chr2 (34-70)||(6110257-6110293)
chr2 (34-70)||(11617090-11617126)
chr2 (34-70)||(19264166-19264202)
chr2 (40-80)||(30421230-30421270)
chr2 (36-96)||(45085325-45085385)
[»] chr3 (34 HSPs)
chr3 (17-112)||(22479030-22479125)
chr3 (25-110)||(21214296-21214381)
chr3 (17-112)||(10114958-10115053)
chr3 (20-110)||(6784374-6784464)
chr3 (17-112)||(10014316-10014411)
chr3 (17-112)||(10252058-10252153)
chr3 (17-112)||(22455984-22456079)
chr3 (17-112)||(25242154-25242249)
chr3 (17-112)||(47443950-47444044)
chr3 (17-112)||(38401427-38401526)
chr3 (33-112)||(8096994-8097073)
chr3 (17-111)||(2994392-2994489)
chr3 (25-78)||(48291877-48291930)
chr3 (33-112)||(7886593-7886672)
chr3 (33-112)||(46918189-46918268)
chr3 (34-96)||(9264621-9264683)
chr3 (40-112)||(30454701-30454773)
chr3 (33-112)||(34194951-34195030)
chr3 (34-96)||(30189641-30189703)
chr3 (34-96)||(41476328-41476390)
chr3 (33-74)||(16033001-16033042)
chr3 (34-70)||(23910531-23910567)
chr3 (34-73)||(2927359-2927398)
chr3 (33-108)||(23209260-23209335)
chr3 (34-73)||(32619845-32619884)
chr3 (34-96)||(6438153-6438215)
chr3 (34-96)||(23311585-23311647)
chr3 (33-71)||(54725627-54725665)
chr3 (47-112)||(17587782-17587847)
chr3 (33-74)||(31126274-31126315)
chr3 (34-71)||(34722622-34722659)
chr3 (35-96)||(50651029-50651090)
chr3 (34-70)||(28875476-28875512)
chr3 (34-70)||(37042435-37042471)
[»] chr1 (37 HSPs)
chr1 (17-112)||(30701402-30701497)
chr1 (17-112)||(50176571-50176666)
chr1 (17-111)||(7397755-7397849)
chr1 (28-112)||(16688196-16688280)
chr1 (17-112)||(25185320-25185416)
chr1 (20-112)||(45840083-45840174)
chr1 (17-111)||(44510237-44510331)
chr1 (33-112)||(41063806-41063886)
chr1 (17-110)||(16661565-16661657)
chr1 (33-109)||(8889717-8889793)
chr1 (33-108)||(5950504-5950579)
chr1 (28-111)||(37538869-37538952)
chr1 (17-75)||(13351729-13351787)
chr1 (25-111)||(15912255-15912340)
chr1 (34-109)||(5858391-5858466)
chr1 (34-104)||(3076361-3076431)
chr1 (33-112)||(35366220-35366299)
chr1 (34-96)||(2246047-2246109)
chr1 (34-96)||(6785522-6785584)
chr1 (34-96)||(12449000-12449062)
chr1 (54-112)||(13352180-13352238)
chr1 (34-96)||(28120788-28120850)
chr1 (34-104)||(33431625-33431695)
chr1 (34-95)||(32624039-32624100)
chr1 (40-112)||(46803688-46803760)
chr1 (33-92)||(35884272-35884331)
chr1 (33-92)||(43765359-43765418)
chr1 (34-92)||(47600075-47600134)
chr1 (34-96)||(2126104-2126166)
chr1 (34-96)||(6786904-6786966)
chr1 (34-92)||(15959677-15959735)
chr1 (34-72)||(25391748-25391786)
chr1 (33-79)||(32318610-32318656)
chr1 (34-96)||(39932605-39932667)
chr1 (34-96)||(40718744-40718806)
chr1 (34-104)||(44148861-44148931)
chr1 (34-70)||(32983230-32983266)
[»] scaffold0330 (1 HSPs)
scaffold0330 (17-112)||(3217-3312)
[»] chr4 (28 HSPs)
chr4 (17-107)||(28142637-28142727)
chr4 (17-109)||(37911931-37912023)
chr4 (17-112)||(5064665-5064760)
chr4 (17-107)||(28318434-28318522)
chr4 (17-112)||(32410375-32410470)
chr4 (35-104)||(29511490-29511559)
chr4 (28-112)||(47516201-47516285)
chr4 (25-105)||(49080312-49080392)
chr4 (28-112)||(46070533-46070616)
chr4 (33-112)||(5841789-5841868)
chr4 (41-112)||(8178249-8178320)
chr4 (33-112)||(8013099-8013178)
chr4 (17-68)||(23978169-23978220)
chr4 (33-96)||(4058778-4058841)
chr4 (33-112)||(53848523-53848602)
chr4 (34-92)||(5483308-5483366)
chr4 (35-73)||(21722731-21722769)
chr4 (35-96)||(5815534-5815595)
chr4 (25-68)||(40411156-40411199)
chr4 (35-73)||(8018445-8018483)
chr4 (34-96)||(16604872-16604934)
chr4 (34-96)||(17794567-17794629)
chr4 (34-96)||(20281655-20281717)
chr4 (35-93)||(32323291-32323349)
chr4 (34-104)||(35310760-35310830)
chr4 (70-112)||(40411750-40411792)
chr4 (34-96)||(41414637-41414699)
chr4 (34-96)||(47867943-47868005)
[»] chr7 (21 HSPs)
chr7 (17-112)||(35887985-35888080)
chr7 (17-99)||(31768991-31769073)
chr7 (33-108)||(38260381-38260456)
chr7 (36-111)||(39170602-39170677)
chr7 (33-110)||(10248593-10248671)
chr7 (34-96)||(6191111-6191173)
chr7 (34-96)||(45486021-45486083)
chr7 (34-96)||(46760289-46760351)
chr7 (34-104)||(47779670-47779740)
chr7 (34-91)||(4910670-4910727)
chr7 (34-106)||(22632155-22632227)
chr7 (34-80)||(9158155-9158201)
chr7 (34-92)||(18102596-18102654)
chr7 (34-96)||(20123712-20123774)
chr7 (35-112)||(3778045-3778122)
chr7 (33-74)||(40560442-40560483)
chr7 (34-70)||(14805936-14805972)
chr7 (34-70)||(15252930-15252966)
chr7 (34-70)||(25737685-25737721)
chr7 (34-70)||(25944642-25944678)
chr7 (33-73)||(48879448-48879488)
[»] scaffold0565 (1 HSPs)
scaffold0565 (20-112)||(5892-5984)
[»] scaffold0010 (1 HSPs)
scaffold0010 (33-112)||(160936-161015)
[»] scaffold0774 (1 HSPs)
scaffold0774 (34-96)||(3461-3523)
[»] scaffold0442 (1 HSPs)
scaffold0442 (35-95)||(10112-10172)
[»] scaffold0045 (1 HSPs)
scaffold0045 (34-96)||(78023-78085)
[»] scaffold0132 (2 HSPs)
scaffold0132 (35-96)||(1079-1140)
scaffold0132 (35-96)||(9039-9100)


Alignment Details
Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 29298374 - 29298271
Alignment:
Q  173 tatatactgttacctgaaaataacttgaattaatggattttcagttttcacatgcttgataaacattaaagtcatggattgggacataagttaataattg 272  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  29298374 tatatactgttat-tgaaaataacttgaattaatggattttcggttttcacatgcttgataaacattaaagtcatggcttaggacataagttaataattg 29298276  T
Q  273 aatct 277  Q
    |||||    
T  29298275 aatct 29298271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 29307299 - 29307205
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  29307299 ttctctacaatcaactaccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaactacgttacaaactactat 29307205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 1144603 - 1144508
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  1144603 ttctctataatcaactaccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactatgttacaaactactatg 1144508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 29307129 - 29307061
Alignment:
Q  209 attttcagttttcacatgcttgataaacattaaagtcatggattgggacataagttaataattgaatct 277  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307129 atttttagttttcacatgcttgataaacattaaagtcatggattgggacataagttaataattgaatct 29307061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 5369132 - 5369053
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaacta 107  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  5369132 caacaaccaatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaaactatgttacaaacta 5369053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 16153457 - 16153363
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||| ||||    
T  16153457 ttctctataatcaactaccaatgaaaatg-tttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactattatg 16153363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 8959689 - 8959782
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||| || |||||||||||||  |||||||||||||    
T  8959689 ttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactaaattacaaactacta 8959782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 3463927 - 3463839
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaact 106  Q
    ||||||| |||||||||||||| |||||| |||||| |||||| |||||||||||||| ||| || |||| |||||||||||||||||||    
T  3463927 ttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaact 3463839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 5736344 - 5736257
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| || |||||||||| |||||||| |||| ||||||| |||||| ||| || ||| ||||||||||||||||||||||||||    
T  5736344 aatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatttcaaagataacataaaaaactatgttacaaactactatg 5736257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 28907118 - 28907210
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||| |||||||||||||| |||||| |||||||||| || ||| |||||||||| ||| || |||||||||| ||||||||||| |||||    
T  28907118 ttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaaatatgttacaaattacta 28907210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 28943513 - 28943605
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||| |||||||||||||| |||||| |||||||||| || ||| |||||||||| ||| || |||||||||| ||||||||||| |||||    
T  28943513 ttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaaatatgttacaaattacta 28943605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 12912390 - 12912327
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||| || ||||||||||||||    
T  12912390 accaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactat 12912327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 32432319 - 32432393
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactact 109  Q
    |||||||||||||||||||||||| ||||||||||||||| ||  || ||| || ||||||||||| ||||||||    
T  32432319 caatgaaaattatttttacatctttatataaaacttatttcaaggataacataagaaactatgttataaactact 32432393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 8506497 - 8506575
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||||||||| ||||||||||||  |||||||||||||| ||  || ||| || |||||||||| ||||||||||||    
T  8506497 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacataagaaactatgttgcaaactactatg 8506575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 19413207 - 19413277
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||| |  ||||||||||||||| ||||||    
T  19413207 ccaatgaaaattgtttttacatcttcccataaaacttatttcaaagaaaacacaaaaaactatgctacaaa 19413277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 30703666 - 30703745
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||||||| || ||| ||||||||| ||||||| |||||| ||| || |||||||||| ||||||  |||||||||||    
T  30703666 accaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaattatgttgtaaactactatg 30703745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 37522684 - 37522622
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||  |||||  ||||||||||||||    
T  37522684 ccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactat 37522622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 38130211 - 38130150
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaacta 95  Q
    |||||||||||||||||||||| ||| |||||||||| || |||| |  |||||||||||||    
T  38130211 ccaatgaaaattatttttacatattcctataaaactttttctaaagaaaacacaaaaaacta 38130150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 41625604 - 41625544
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||| |||||||||||||| ||| |||||||||| ||| |  ||||||||||||||    
T  41625604 aatgaaaataatttttacatcttcctatgaaacttatttcaaagaaaacacaaaaaactat 41625544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 10154024 - 10153985
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttat 72  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  10154024 accaatgaaaattgtttttacatcttcctataaaacttat 10153985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 11261979 - 11261921
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||    
T  11261979 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaa 11261921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 34425396 - 34425458
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||| ||| |||||||||| ||| ||| |  ||||||||||||||    
T  34425396 ccaatgaaaattgtttttacatattcctataaaacttttttcaaagaaaacacaaaaaactat 34425458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 42273713 - 42273775
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  42273713 ccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacacaaaaaactat 42273775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 5659629 - 5659584
Alignment:
Q  20 tctaaaatcaactaccaatgaaaattatttttacatcttcatataa 65  Q
    |||| |||||||||||||| |||||| ||||||||||||| |||||    
T  5659629 tctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 25840931 - 25841000
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    ||||||||||| |||||||||||||  || |||||||||  ||| |  ||||||||||||||| ||||||    
T  25840931 caatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 25841000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 6686450 - 6686486
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  6686450 ccaatgaaaattgtttttacatcttcctataaaactt 6686486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 20644080 - 20644116
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  20644080 ccaatgaaaattgtttttacatcttcctataaaactt 20644116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 31690716 - 31690680
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaact 69  Q
    ||||||||||||||||||||||||||  |||||||||    
T  31690716 accaatgaaaattatttttacatctttctataaaact 31690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 4987990 - 4988083
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  4987990 ttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactacta 4988083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 16524426 - 16524518
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactact 109  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||||    
T  16524426 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactact 16524518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 4032034 - 4032127
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  4032034 ttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatttcaaagataacacaaaaaactatgttacaaactacta 4032127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 16013544 - 16013454
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaacta 107  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || | |||||||||||||||||||||||    
T  16013544 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaactatgttacaaacta 16013454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 15830750 - 15830837
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||| |||||| ||||    
T  15830750 aatcaactatcaatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaaattatgttagaaactattatg 15830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 3888474 - 3888565
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactac 108  Q
    ||||||| ||||||||||| ||||||||| ||| ||||||||| |||||||||||||| ||| || ||||||| ||||||||||| ||||||    
T  3888474 ttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatttcaaatataacacaaataactatgttacgaactac 3888565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 5300696 - 5300658
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaactta 71  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  5300696 accaatgaaaattgtttttacatcttcctataaaactta 5300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 3095814 - 3095778
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  3095814 ccaatgaaaattgtttttacatcttcctataaaactt 3095778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 21964018 - 21964062
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaa 77  Q
    |||||| |||||||||||||||||||   ||||||||||||||||    
T  21964018 accaataaaaattatttttacatctttccataaaacttattttaa 21964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 9e-33; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 41362420 - 41362325
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  41362420 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatg 41362325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 4038994 - 4038900
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  4038994 ttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatttcaaaaataacac-aaaaactatgttacaaactactatg 4038900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 8673428 - 8673518
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaacta 107  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||    
T  8673428 ttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatttcaaatataacacaaaaaactatgttacaaacta 8673518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 17336791 - 17336883
Alignment:
Q  19 ctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||| || |||||||||||||||||||||||||||||    
T  17336791 ctctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatttcaaagatgacacaaaaaactatgttacaaactactat 17336883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 38072210 - 38072305
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||  ||||||||||| || ||| || ||||||||||||||||||||||||||||||    
T  38072210 ttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattcaaagataacacaaaaaactatgttacaaactactatg 38072305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 8745633 - 8745725
Alignment:
Q  20 tctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||||||||||| || ||| |||||| |||||||||| ||||||||||||    
T  8745633 tctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaagaataacacaagaaactatgttgcaaactactatg 8745725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 2628261 - 2628182
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  || |||||| |||||||||| ||||||||||||    
T  2628261 accaatgaaaattatttttacatcttcctataaaacttattttaaggataacacaagaaactatgttgcaaactactatg 2628182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 17314877 - 17314972
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||||||||||||||  |||||||| ||| ||| ||| |||||| ||| || ||||||||| ||||||||||||||||||||    
T  17314877 ttctctataatcaactaccaatgaaaattgcttttacattttcgtatgaaatttatttcaaagatgacacaaaaagctatgttacaaactactatg 17314972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 29147350 - 29147256
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| ||||||| || |||||||||| ||||| ||||||| ||| ||||||||||||   || |||||| ||| ||||||||||||||||||    
T  29147350 ttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaacttattttatggataacacaagaaattatgttacaaactactat 29147256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 4480841 - 4480901
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||||||||||||||||  ||||||||||||||||| || ||||||||| ||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctat 4480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 17713286 - 17713365
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||| |||||| |||||| |||||||||||||| ||  || |||||| |||||||||| |||| |||||||    
T  17713286 accaatgaaaattgtttttaaatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaaatactatg 17713365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 25195159 - 25195085
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||| ||||||| |||||| ||| || ||||||||||    
T  25195159 ttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatttcaaagataacacaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 28497232 - 28497157
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    |||||||||| |||||||||||||  ||||||||||||| ||  || |||||| |||||||||| |||||||||||    
T  28497232 aatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactatgttgcaaactactat 28497157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 7022499 - 7022437
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||| |  ||||||||||||||    
T  7022499 ccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactat 7022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 8711941 - 8712002
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||||||||||||||||| |||||||||| |||  ||||  ||||||||||||||    
T  8711941 ccaatgaaaattatttttacatcttcctataaaactt-tttccaaaaaaacacaaaaaactat 8712002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 26954494 - 26954448
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattt 74  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26954494 caacaaccaatgaaaattgtttttacatcttcctataaaacttattt 26954448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 36190836 - 36190898
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  36190836 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 36190898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 41086482 - 41086420
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| |||||||||||| ||||||||||| ||| ||| |  ||||||||||||||    
T  41086482 ccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaactat 41086420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 7858593 - 7858654
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  7858593 caatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaactat 7858654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 43216441 - 43216381
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  43216441 aatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 43216381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 6401683 - 6401761
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| ||||| ||||||||||||  ||  |||||||||| || ||| ||||||||||||||  |||||| ||||||    
T  6401683 accaatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaattactat 6401761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 26483596 - 26483658
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||| | |||||||||| ||| ||| |  ||||||||||||||    
T  26483596 ccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaactat 26483658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 31734179 - 31734241
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| |||||| |||||| |||||||||| ||| ||| |  ||||||||||||||    
T  31734179 ccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactat 31734241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13144040 - 13143979
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttatttt-aaaaattacacaaaaaactat 96  Q
    |||||||||| ||||||||||||| |||||||||| |||| ||| |  ||||||||||||||    
T  13144040 aatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactat 13143979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 27819736 - 27819801
Alignment:
Q  47 tttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||||||||| |||||||||||||||  |  || | |||| |||||||||||||||||| ||||    
T  27819736 tttttacatctttatataaaacttatttgtaggataatacaagaaactatgttacaaactattatg 27819801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 33563606 - 33563561
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaa 80  Q
    ||||||||||| |||||||||||||  ||||||||||||| |||||    
T  33563606 caatgaaaattgtttttacatcttcccataaaacttatttaaaaaa 33563561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 14576249 - 14576213
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaact 69  Q
    ||||||||||||||||||||||||||  |||||||||    
T  14576249 accaatgaaaattatttttacatctttctataaaact 14576213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 34158386 - 34158346
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttatttt 75  Q
    ||||||||||| ||||||||||||| |||||||||| ||||    
T  34158386 caatgaaaattgtttttacatcttcctataaaacttttttt 34158346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 34890270 - 34890234
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  34890270 ccaatgaaaattgtttttacatcttcctataaaactt 34890234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 39187297 - 39187337
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttatt 73  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  39187297 accaatgaaaattatttttacatctttccataaaacttatt 39187337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 9e-33; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 32010151 - 32010246
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||| |||||||||||||||    
T  32010151 ttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactatattacaaactactatg 32010246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 26998366 - 26998457
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactac 108  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||    
T  26998366 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactatcttacaaactac 26998457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 44442180 - 44442276
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaa-aaactatgttacaaactactatg 112  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||    
T  44442180 ttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaatttattttaaaaataacacaaataaactatgttacaaactattatg 44442276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 38071044 - 38071135
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactac 108  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||| || ||||||||||||||||||||||||||    
T  38071044 ttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatttcaaagataacacaaaaaactatgttacaaactac 38071135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 32273720 - 32273807
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    ||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||||| ||| || ||||||||||||||||||||||    
T  32273720 ttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaa 32273807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 4891742 - 4891655
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacac-aaaaaactatgttacaaactactat 111  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||||||| ||| || |||| |||||||||||||||||||||||||    
T  4891742 aatcaactaccaataaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaaactatgttacaaactactat 4891655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 20380172 - 20380256
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttac 101  Q
    ||||||| |||||||||||||||||  || ||||||||| ||| |||||||||||||| ||| || |||||||||||||||||||    
T  20380172 ttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatttcaaagataacacaaaaaactatgttac 20380256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 11031025 - 11030951
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaacta 107  Q
    |||||| |||||| |||||| |||||  |||||||||||||||||| || | |||| ||||||||||||||||||    
T  11031025 accaataaaaattgtttttatatctttctataaaacttattttaaagataagacaagaaactatgttacaaacta 11030951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 14874029 - 14874091
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  14874029 ccaatgaaaattatttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 14874091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 16495028 - 16494980
Alignment:
Q  26 atcaactaccaatgaaaattatttttacatcttcatataaaacttattt 74  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  16495028 atcaactatcaatgaaaattgtttttacatcttcctataaaacttattt 16494980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 33198726 - 33198664
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaacta 95  Q
    |||||| |||||| ||||||||||||| |||||||||| ||||||| |  |||||||||||||    
T  33198726 accaatcaaaattgtttttacatcttcctataaaacttcttttaaagaaaacacaaaaaacta 33198664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 45660431 - 45660493
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  45660431 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 45660493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 28858375 - 28858436
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaacta 95  Q
    |||||||||||||||||||||||||  |||||||||| ||| ||| |  |||||||||||||    
T  28858375 ccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaacta 28858436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 43415468 - 43415525
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||| |  ||||||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaa 43415525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 25572111 - 25572181
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    |||||||||||| |||||||||||||  || |||||||||  ||| |  ||||||||||||||| ||||||    
T  25572111 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 25572181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 28599242 - 28599180
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||||||||||||||||| |||||| ||| ||  ||| |  ||||||||||||||    
T  28599242 ccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactat 28599180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 40584498 - 40584448
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattttaaa 78  Q
    |||| ||||||||||||| |||||||||||||  |||||||||||| ||||    
T  40584498 caacaaccaatgaaaattgtttttacatcttcccataaaacttattctaaa 40584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 8032763 - 8032702
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaact 94  Q
    |||||| |||||| ||||||||||||| |||||||||||    |||||| ||||||||||||    
T  8032763 accaataaaaattgtttttacatcttcctataaaacttaacacaaaaataacacaaaaaact 8032702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 33677550 - 33677611
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||| ||||||||||||| ||||||||||| |  |||||  ||| ||||||||||    
T  33677550 caatgaaaattgtttttacatcttcctataaaacttagtaaaaaaaaaacataaaaaactat 33677611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 6110293 - 6110257
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  6110293 ccaatgaaaattgtttttacatcttcctataaaactt 6110257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 11617090 - 11617126
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  11617090 ccaatgaaaattgtttttacatcttcctataaaactt 11617126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 19264166 - 19264202
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  19264166 ccaatgaaaattgtttttacatcttcctataaaactt 19264202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 30421270 - 30421230
Alignment:
Q  40 aaaattatttttacatcttcatataaaacttattttaaaaa 80  Q
    |||||| ||||||||||||| |||||||||| |||||||||    
T  30421270 aaaattgtttttacatcttcttataaaactttttttaaaaa 30421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 45085325 - 45085385
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||| |  | ||||||||||||    
T  45085325 aatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactat 45085385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 22479125 - 22479030
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||| | ||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  22479125 ttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatg 22479030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 21214296 - 21214381
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  21214296 aatcaactaccaatgaaaattgtttttacatctttctataaaacttatttcaaaaataacacaaaaaactatgttacaaactacta 21214381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 10114958 - 10115053
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || | |||||||| |||||||||||||||||||    
T  10114958 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaattatgttacaaactactatg 10115053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 6784374 - 6784464
Alignment:
Q  20 tctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||| |||||| ||| || ||||||||||||||||||||||||||||    
T  6784374 tctataatcaactacgaatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaactatgttacaaactacta 6784464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 10014316 - 10014411
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || | ||||| || |||||||||||||||||||    
T  10014316 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactactatg 10014411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 10252058 - 10252153
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || | ||||| || |||||||||||||||||||    
T  10252058 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactactatg 10252153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 22456079 - 22455984
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||||||| |||||| |||||| |||||| |||||||||||||| |||  | ||||||||||||||||||||||||||||||    
T  22456079 ttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatttcaaagttaacacaaaaaactatgttacaaactactatg 22455984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 25242249 - 25242154
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||| ||  ||||||| ||||| ||||||  |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  25242249 ttctctataatcaactatcaccgaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatg 25242154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 47444044 - 47443950
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||||| |||||||| ||||||||||||| ||||||| |||||| ||| || ||||||||||||||||||||||||| ||||    
T  47444044 ttctctataatcaactaccagtgaaaattgtttttacatcttc-tataaaatttatttcaaagataacacaaaaaactatgttacaaactaatatg 47443950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 38401427 - 38401526
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaac----tatgttacaaactactatg 112  Q
    ||||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||| ||| || |||||||||||    |||||||||||||||||||    
T  38401427 ttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatttcaaagataacacaaaaaactatatatgttacaaactactatg 38401526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 8097073 - 8096994
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||  || |||||| |||||||||| ||||||||||||    
T  8097073 accaatgaaaattatttttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactactatg 8096994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 2994489 - 2994392
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcat----ataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| ||||||||||||||||||||| |||| |||||||| |    ||||||||||||| ||  || |||||||||||||||||||||||||||||    
T  2994489 ttctctataatcaactaccaatgaaaattgtttt-acatcttccttcctataaaacttatttcaagcataacacaaaaaactatgttacaaactactat 2994392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 48291877 - 48291930
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaa 78  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  48291877 aatcaactaccaatgaaaattatttttacaccttcctataaaacttattttaaa 48291930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 7886672 - 7886593
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||| ||||||||||||  ||||||| |||||| || ||| |||||| ||||||||| |||||||||||||    
T  7886672 accaatgaaaattgtttttacatctttctataaaatttatttcaagaataacacaagaaactatgtcacaaactactatg 7886593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 46918268 - 46918189
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||  || |||||| ||||||||||  |||||||||||    
T  46918268 accaatgaaaattgtttttagatcttcctataaaacttattttaaggataacacaagaaactatgttgtaaactactatg 46918189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 9264621 - 9264683
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| |  ||||||||||||||    
T  9264621 ccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactat 9264683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 30454773 - 30454701
Alignment:
Q  40 aaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||| ||||||||||||  |||||||||||||| ||  || |||||| |||||||||| ||||||||||||    
T  30454773 aaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaactatgttgcaaactactatg 30454701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 34194951 - 34195030
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |    | | |||| |||||||||| ||||||||||||    
T  34194951 accaatgaaaattgtttttacatcttcctataaaacttatttcatgggtaagacaagaaactatgttgcaaactactatg 34195030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 30189641 - 30189703
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  30189641 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 30189703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 41476390 - 41476328
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||||||||||||||||  |||||||||| ||| ||| |  ||||||||||||||    
T  41476390 ccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaactat 41476328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 16033042 - 16033001
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattt 74  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16033042 accaatgaaaattgtttttacatcttcctataaaacttattt 16033001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 23910567 - 23910531
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||||||||||||||||| ||||||||||    
T  23910567 ccaatgaaaattatttttacatcttcctataaaactt 23910531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 2927359 - 2927398
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttatt 73  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  2927359 ccaatgaaaattatttttacatcttcccataaaacttatt 2927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 23209335 - 23209260
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactac 108  Q
    |||||| |||||||||||| ||||||  |||||||||||||| || ||| |||| | ||||||| | |||||||||    
T  23209335 accaataaaaattattttttcatctttctataaaacttatttcaagaataacacgagaaactatatcacaaactac 23209260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 32619884 - 32619845
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttatt 73  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  32619884 ccaatgaaaattatttttacatcttcttataaaacctatt 32619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 6438153 - 6438215
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||| ||| ||| ||| |  ||||||||||||||    
T  6438153 ccaatgaaaattgtttttacatcttcctataaagcttttttcaaagaaaacacaaaaaactat 6438215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 23311647 - 23311585
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||| ||||||||    
T  23311647 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactat 23311585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 54725665 - 54725627
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaactta 71  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  54725665 accaatgaaaattgtttttacatcttcctataaaactta 54725627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 17587782 - 17587847
Alignment:
Q  47 tttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||| |||||||||||||| || ||| ||| || ||||||| || |||| |||||||    
T  17587782 tttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatg 17587847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 31126274 - 31126315
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattt 74  Q
    ||||||||||||||||||||||||||   |||||||||||||    
T  31126274 accaatgaaaattatttttacatctttccataaaacttattt 31126315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 34722659 - 34722622
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactta 71  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  34722659 ccaatgaaaattgtttttacatcttcttataaaactta 34722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 50651090 - 50651029
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||| ||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  50651090 caatgaaaattgtttttacatcttcctataaaactttttgcaaagaaaacacaaaaaactat 50651029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 28875476 - 28875512
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  28875476 ccaatgaaaattgtttttacatcttcttataaaactt 28875512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 37042471 - 37042435
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  37042471 ccaatgaaaattgtttttacatcttcctataaaactt 37042435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 30701497 - 30701402
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| || |||||||||| |||||||||||||||||||    
T  30701497 ttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaaaaattatgttacaaactactatg 30701402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 50176571 - 50176666
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||||||| |||||| ||||||||||||| ||||||| |||||| ||| || ||||||||||||||||||||||||||||||    
T  50176571 ttctctataatcaactaccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatg 50176666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 7397755 - 7397849
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| |||||| |||||||||||||| ||||||||||||| ||||||| |||||| ||| || |||||||||||||||||||||||||||||    
T  7397755 ttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactat 7397849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 16688196 - 16688280
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  16688196 caacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaaaataacataaaaaactatgttacaaactactatg 16688280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 25185416 - 25185320
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacac-aaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||||||||||| || |||| |||||||| |||||||||||||| ||| || |||| ||||||||||||||||||||||||||    
T  25185416 ttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatttcaaagataacacaaaaaaactatgttacaaactactatg 25185320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 45840174 - 45840083
Alignment:
Q  20 tctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||| ||||||||||||||||||||| ||||| ||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||| ||||    
T  45840174 tctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatttcaaaaataacacaaaaaactatgttacaaactattatg 45840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 44510331 - 44510237
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| |||||| || ||||||||||| |||||||| |||| ||||||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  44510331 ttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatttcaaaaataacacaaaaaactatgttataaactactat 44510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 41063806 - 41063886
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaa-cttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||    
T  41063806 accaatgaaaattatttttacatctttctataaaagcttattttaagaataacacaaaaaactatgttgcaaactactatg 41063886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 16661565 - 16661657
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactacta 110  Q
    ||||||| |||||||||||||| |||||| |||||||||| || ||| |||||||||| ||| || |||||||||| ||||||||||| |||||    
T  16661565 ttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaaatatgttacaaattacta 16661657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 8889793 - 8889717
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactact 109  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||  || |||||| ||||||| ||||||||||||    
T  8889793 accaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaataaactatattacaaactact 8889717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 5950504 - 5950579
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactac 108  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||  || |||||| |||||||||| ||||||||    
T  5950504 accaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactac 5950579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 37538869 - 37538952
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    |||| ||||||||||||| | ||||||||||| |||||||||||||| ||  || |||||| |||||||||| |||||||||||    
T  37538869 caacaaccaatgaaaattgtctttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactactat 37538952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 13351729 - 13351787
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttatttt 75  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  13351729 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttttttt 13351787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 15912255 - 15912340
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    ||||||| | ||||||||||| ||||||||||||| |||||||||||||| ||  | || |||| ||||||||||||||||||||||    
T  15912255 aatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatttcaagga-taaacaagaaactatgttacaaactactat 15912340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 5858466 - 5858391
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactact 109  Q
    |||||||||||| |||||| |||||| |||||||||||||| ||  || |||||| |||||||||| |||||||||    
T  5858466 ccaatgaaaattgtttttatatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactact 5858391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 3076361 - 3076431
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    ||||||||||||||||||||||||||  ||||||||||||  ||| |  ||||||||||||||| ||||||    
T  3076361 ccaatgaaaattatttttacatcttcccataaaacttattccaaataaaacacaaaaaactatgctacaaa 3076431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 35366299 - 35366220
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||| |||||| ||||||||||||  ||||||| |||||| ||  || |||||| |||||||||| ||||||||||||    
T  35366299 accaattaaaattgtttttacatctttctataaaatttatttcaacgataacacaagaaactatgttgcaaactactatg 35366220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 2246109 - 2246047
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||| ||| |||||||||||||| ||| |  ||||||||||||||    
T  2246109 ccaatgaaaattctttttacatattcctataaaacttatttcaaagaaaacacaaaaaactat 2246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 6785522 - 6785584
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| |||||||||||||||||||||||| ||  ||| |  ||||||||||||||    
T  6785522 ccaatgaaaattgtttttacatcttcatataaaactttttcaaaagaaaacacaaaaaactat 6785584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 12449062 - 12449000
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  12449062 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 12449000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 13352180 - 13352238
Alignment:
Q  54 atcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||| |||||||||||||| ||| || |||||||||| ||||| |||||||||||||    
T  13352180 atcttcctataaaacttatttcaaagataacacaaaaaattatgtaacaaactactatg 13352238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 28120850 - 28120788
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| |||||||||||||  |||||| | ||||||||||  ||||||||||||||    
T  28120850 ccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactat 28120788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 33431625 - 33431695
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    |||||||||||| ||||| |||| || |||||||||| ||| |||||  ||||||||||||||| ||||||    
T  33431625 ccaatgaaaattgtttttccatcctcctataaaacttttttaaaaaaaaacacaaaaaactatgctacaaa 33431695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 32624100 - 32624039
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaacta 95  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  |||||||||||||    
T  32624100 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaacta 32624039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 46803760 - 46803688
Alignment:
Q  40 aaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||| ||||||||||||  ||| |||||||||  ||  || ||||||||||||||||| ||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactatgttgcaaactactatg 46803688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 35884272 - 35884331
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    ||||||||||||||||||||||||||   |||||| |||||| |||||  ||||||||||    
T  35884272 accaatgaaaattatttttacatctttccataaaatttatttcaaaaagaacacaaaaaa 35884331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 43765359 - 43765418
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    ||||||||||| | ||||||||||||| ||||||||||||| |||| |  ||||||||||    
T  43765359 accaatgaaaaatgtttttacatcttcctataaaacttattctaaagaaaacacaaaaaa 43765418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 47600134 - 47600075
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaac-ttattttaaaaattacacaaaaaa 92  Q
    |||||||||||| ||||||||||||| |||||||| || |||| || |||||||||||||    
T  47600134 ccaatgaaaattgtttttacatcttcctataaaactttttttttaagattacacaaaaaa 47600075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 2126104 - 2126166
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  2126104 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 2126166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 6786904 - 6786966
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| | |||||||||||||||||||||| ||  ||| |  ||||||||||||||    
T  6786904 ccaatgaaaattgtgtttacatcttcatataaaactttttccaaagaaaacacaaaaaactat 6786966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 15959735 - 15959677
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||    
T  15959735 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaa 15959677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 25391748 - 25391786
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttat 72  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  25391748 ccaatgaaaattgtttttacattttcatataaaacttat 25391786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 32318656 - 32318610
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaa 79  Q
    ||||||||||||| |||||||||||||  ||||||||||||| ||||    
T  32318656 accaatgaaaattgtttttacatcttccaataaaacttatttaaaaa 32318610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 39932667 - 39932605
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||| |||||| |||||| |||||| |||||||||||||  |||||  ||||||||||||||    
T  39932667 ccaataaaaattgtttttatatcttcttataaaacttattaaaaaaaaaacacaaaaaactat 39932605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 40718744 - 40718806
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||| |||| ||||||||||||||| ||| ||| |  ||||||||||||||    
T  40718744 ccaatgaaaattgtttctacaacttcatataaaacttttttcaaagaaaacacaaaaaactat 40718806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 44148931 - 44148861
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    |||||||||||| |||||||||||||  || |||||||||  ||| |  ||||||||||||||| ||||||    
T  44148931 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaa 44148861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 32983266 - 32983230
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  32983266 ccaatgaaaattgtttttacatcttcttataaaactt 32983230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 3217 - 3312
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||||||||||||||| ||||| |||||| |||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  3217 ttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatg 3312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 28142727 - 28142637
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaacta 107  Q
    ||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||| || |||||||||| ||||||||||||||    
T  28142727 ttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttattttaaagataacacaaaaaattatgttacaaacta 28142637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 37911931 - 37912023
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactact 109  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||  |||||||||||||||||| || |||||||||||||||||| ||||||||    
T  37911931 ttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttattttaaagataacacaaaaaactatgttataaactact 37912023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 5064760 - 5064665
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||| |||||||||| ||||||||||||| | |||||||||||| ||| || |||||||||| ||||||||||| |||||||    
T  5064760 ttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatttcaaagataacacaaaaaattatgttacaaattactatg 5064665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 28318522 - 28318434
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaacta 107  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||  |||||| ||| || |||||||||||||||||||||||||    
T  28318522 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa--ttatttcaaagataacacaaaaaactatgttacaaacta 28318434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 32410375 - 32410470
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||| | ||| |||||||||||    
T  32410375 ttctctataattaactagcaatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactttattataaactactatg 32410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 29511490 - 29511559
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactatgttacaaa 29511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 47516285 - 47516201
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||| ||||||||||||| ||||||| ||||| |||||||||||||| ||| || |||||||||||||| |||||||||||||||    
T  47516285 caacaaccaatgaaaattgtttttacttcttcctataaaacttatttcaaagataacacaaaaaactatattacaaactactatg 47516201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 49080312 - 49080392
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaac 105  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || | |||||||| ||||||||||||    
T  49080312 aatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataagacaaaaaattatgttacaaac 49080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 46070616 - 46070533
Alignment:
Q  28 caactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||| ||| |  |||| |||||||||||||||||||||||||    
T  46070616 caacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagacaacac-aaaaactatgttacaaactactatg 46070533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 5841868 - 5841789
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||  || |||||| |||||||||| ||||||||||||    
T  5841868 accaatgaaaattatttttacatcttcctataaaatttatttcaaggataacacaagaaactatgttgcaaactactatg 5841789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 8178320 - 8178249
Alignment:
Q  41 aaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||| ||||||||||||| |||||||||||||| ||| || |||||  |||||||||||||||||||||||    
T  8178320 aaattgtttttacatcttcttataaaacttatttcaaagataacacatgaaactatgttacaaactactatg 8178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 8013178 - 8013099
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||| |||||| ||||||||||||  ||| |||||||||| ||  || |||||| |||||||||||||||||||||||    
T  8013178 accaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactatgttacaaactactatg 8013099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 23978220 - 23978169
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaac 68  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  23978220 ttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 4058778 - 4058841
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  4058778 accaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 4058841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 53848523 - 53848602
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||| |||||| ||||||| ||||| ||||||| |||||| ||  || |||||| |||||||||| ||||||||||||    
T  53848523 accaattaaaattgtttttacgtcttcctataaaaattatttcaaggataacacaagaaactatgttgcaaactactatg 53848602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 5483366 - 5483308
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| |  ||||||||||    
T  5483366 ccaatgaaaattgtttttacatcttcctattaaacttattttaaagaaaacacaaaaaa 5483308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 21722769 - 21722731
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttatt 73  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  21722769 caatgaaaattatttttacatcttcctataaaacttatt 21722731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 5815534 - 5815595
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||| ||||||||||||||||||||  ||||||||||||| ||| |  ||||||||||||||    
T  5815534 caataaaaattatttttacatcttctcataaaacttatttcaaagaaaacacaaaaaactat 5815595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 40411156 - 40411199
Alignment:
Q  25 aatcaactaccaatgaaaattatttttacatcttcatataaaac 68  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||    
T  40411156 aatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 8018445 - 8018483
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttatt 73  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  8018445 caatgaaaattatttttacatctttatatgaaacttatt 8018483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 16604934 - 16604872
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| |||| |||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  16604934 ccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 16604872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 17794629 - 17794567
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| ||||||| |||||| ||| |  || |||||||||||    
T  17794629 ccaatgaaaattgtttttacatcttcctataaaatttatttcaaagaaaacgcaaaaaactat 17794567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 20281655 - 20281717
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  20281655 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 20281717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 32323349 - 32323291
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaac 93  Q
    ||||||||||| |||||||||||||  ||||| ||||||||||| |  |||||||||||    
T  32323349 caatgaaaattgtttttacatcttcccataaatcttattttaaagaaaacacaaaaaac 32323291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 35310830 - 35310760
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    |||||||||||| ||||||||||||   || ||||||||| |||| |  ||||||||||||||| ||||||    
T  35310830 ccaatgaaaattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatgctacaaa 35310760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 40411750 - 40411792
Alignment:
Q  70 tattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||| |||||| |||||||||||||| |||||||||||||||    
T  40411750 tatttcaaaaataacacaaaaaactatattacaaactactatg 40411792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 41414699 - 41414637
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||| |||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  41414699 ccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 41414637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 47867943 - 47868005
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  47867943 ccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 47868005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 35888080 - 35887985
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||| |||||||||| |||||||||| ||||||||||||| ||||||| |||||| ||| || |||||||||| |||||||||||||||||||    
T  35888080 ttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatttcaaagataacacaaaaaattatgttacaaactactatg 35887985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 31769073 - 31768991
Alignment:
Q  17 ttctctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgtt 99  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||| || |||||||||||||||||    
T  31769073 ttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagatgacacaaaaaactatgtt 31768991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 38260381 - 38260456
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactac 108  Q
    |||||||||||||||||||||| |||  |||||||||||||| || ||| |||||||||||||| |||||||||||    
T  38260381 accaatgaaaattatttttacaactttctataaaacttatttcaagaataacacaaaaaactatattacaaactac 38260456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 39170602 - 39170677
Alignment:
Q  36 aatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactat 111  Q
    |||||||||| ||||||||||||| |||||||||||||| ||  || |||||| ||||||||||||||||||||||    
T  39170602 aatgaaaattgtttttacatcttcgtataaaacttatttcaaggataacacaataaactatgttacaaactactat 39170677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 10248593 - 10248671
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaa-aaaactatgttacaaactacta 110  Q
    ||||||||||||| ||||||||||||  |||||||||||||| ||  || |||||| ||||||||||||||||||||||    
T  10248593 accaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactatgttacaaactacta 10248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 6191111 - 6191173
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  6191111 ccaatgaaaattgtttttacatcttcctataaaacttttttaaaagaaaacacaaaaaactat 6191173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 45486021 - 45486083
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||||||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  45486021 ccaatgaaaattatttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 45486083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 46760351 - 46760289
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||||||    
T  46760351 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 46760289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 47779670 - 47779740
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaa 104  Q
    |||||||||||| |||||||||||||  || ||||||||| |||| |  ||||||||||||||| ||||||    
T  47779670 ccaatgaaaattgtttttacatcttcccatgaaacttattctaaagaaaacacaaaaaactatgctacaaa 47779740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 4910727 - 4910670
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaa 91  Q
    |||||||||||||||||||||||||| |||||||||| || |||| |  |||||||||    
T  4910727 ccaatgaaaattatttttacatcttcctataaaactttttctaaagaaaacacaaaaa 4910670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 22632155 - 22632227
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaact 106  Q
    |||||||||||| |||||||||||||  || |||||||||| ||| |  ||||||||| ||||| ||||||||    
T  22632155 ccaatgaaaattgtttttacatcttcccatgaaacttatttcaaagaaaacacaaaaatctatgctacaaact 22632227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 9158155 - 9158201
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaa 80  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  9158155 ccaaagaaaattgtttttacatcttcctataaaactttttttaaaaa 9158201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 18102596 - 18102654
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaa 92  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |  ||||||||||    
T  18102596 ccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaa 18102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 20123774 - 20123712
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||  |||||||||| ||  ||| | |||||||||||||||    
T  20123774 ccaatgaaaattgtttttacatcttgctataaaactttttccaaagaatacacaaaaaactat 20123712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 3778045 - 3778122
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||||||||||||||||| || ||| |  |||| |||||| ||  || |||||| |||||||||| ||||||||||||    
T  3778045 caatgaaaattatttttatattttcctggaaaaattatttcaaggataacacaataaactatgttgcaaactactatg 3778122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 40560442 - 40560483
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattt 74  Q
    |||||||| |||||||||||||||||  ||||||||||||||    
T  40560442 accaatgagaattatttttacatctttctataaaacttattt 40560483  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 14805936 - 14805972
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  14805936 ccaatgaaaattgtttttacatcttcctataaaactt 14805972  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 15252930 - 15252966
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  15252930 ccaatgaaaattgtttttacatcttcctataaaactt 15252966  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 25737721 - 25737685
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  25737721 ccaatgaaaattgtttttacatcttcctataaaactt 25737685  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 25944642 - 25944678
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaactt 70  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  25944642 ccaatgaaaattgtttttacatcttcctataaaactt 25944678  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 48879448 - 48879488
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttatt 73  Q
    |||||||| |||||||||||||||||  |||||||||||||    
T  48879448 accaatgagaattatttttacatctttctataaaacttatt 48879488  T

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Target: scaffold0565 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 5984 - 5892
Alignment:
Q  20 tctaaaatcaactaccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    |||| ||||||||| ||| ||||||| ||||||||||||| |||||||||||||| ||  || |||||||||||||| |||||||||||||||    
T  5984 tctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatttcaatgataacacaaaaaactatattacaaactactatg 5892  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 161015 - 160936
Alignment:
Q  33 accaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactatgttacaaactactatg 112  Q
    ||||||||||||| |||||||| |||  ||| |||||||||| ||  || |||||| |||||||||| ||||||||||||    
T  161015 accaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaactatgttgcaaactactatg 160936  T

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Target: scaffold0774 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 3523 - 3461
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||||||||||||||||| |||||||||| ||  ||| |  ||||||||||||||    
T  3523 ccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaaactat 3461  T

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Target: scaffold0442 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 10112 - 10172
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaacta 95  Q
    ||||||||||| ||||||||||||| |||||||||| || |||| |  |||||||||||||    
T  10112 caatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaaacta 10172  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 78023 - 78085
Alignment:
Q  34 ccaatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    |||||||||||| ||||||||||||| |||| ||||| ||| ||| |  ||||||||||||||    
T  78023 ccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactat 78085  T

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Target: scaffold0132 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 1079 - 1140
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||| | ||||||||||||  |||||||||| ||| |||||  ||||||||||||||    
T  1079 caatgaaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaaactat 1140  T

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Target: scaffold0132; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 9039 - 9100
Alignment:
Q  35 caatgaaaattatttttacatcttcatataaaacttattttaaaaattacacaaaaaactat 96  Q
    ||||||||| | ||||||||||||  |||||||||| ||| |||||  ||||||||||||||    
T  9039 caatgaaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaaactat 9100  T

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