View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_80 (Length: 271)
Name: NF2014_low_80
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_80 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 12 - 255
Target Start/End: Original strand, 7760614 - 7760856
Alignment:
| Q |
12 |
gattattgacatgagaaaaacatgaaattatacatcttctaaaggccggatgatcaacgtttgcactcatgtgttcaatgtattattagtaaatggccaa |
111 |
Q |
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| T |
7760614 |
gattattgacatgagaaaaacatgaaattatacatcttctaaaggccggatgatcaacgtttgcactcatgtgttcaatgtattattagtaaatggccaa |
7760713 |
T |
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| Q |
112 |
acattaaatactgagagactcattcagaatctggaagctttagtgcaaggacatgatttaatcctacttggggcagacttaatactagcagtagaagcaa |
211 |
Q |
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| T |
7760714 |
acattaaatactgagagactcattcagaatctggaagctttagtgcaaggacatgatttaaccctacttggggcagacttaatactagcagtagaagcca |
7760813 |
T |
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| Q |
212 |
cttggggactcatgtagcgctgataatgaagcattacagcttaa |
255 |
Q |
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| T |
7760814 |
ctt-gggactcatgtagcgctgataatgaagcattacagcttaa |
7760856 |
T |
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