View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_88 (Length: 251)
Name: NF2014_low_88
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_88 |
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Alignment Details
Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 76 - 234
Target Start/End: Complemental strand, 25109303 - 25109146
Alignment:
| Q |
76 |
tcacgaagtgaaaaattgccactttctctgacgcaattttactgaagattatattaaataaataaaacatacatcacctttataatacaaacacaaaact |
175 |
Q |
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| T |
25109303 |
tcacgaagt-aaaaattgccactttctctgacgcaattttactgaagattatattaaataaataaaacatacatcacctttataatacaaacaaaaaact |
25109205 |
T |
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| Q |
176 |
caattatactctcgagttatgctatataaatgataaagttggtaagttagagatcaact |
234 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25109204 |
caattatactctcgagttatgctatataaatgataaagttggtaagttagagatcaact |
25109146 |
T |
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