View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2014_low_90 (Length: 251)
Name: NF2014_low_90
Description: NF2014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2014_low_90 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 45460918 - 45460676
Alignment:
| Q |
9 |
cgaagaatatgcaacctcaacgaggccaaaacataacagaaagcatgcggatatcatcaaattcttctcccaatacaaagcaatgattagtgacatgaga |
108 |
Q |
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| T |
45460918 |
cgaaaaatatgcaacctcaacgaggccaaaacataacagaaagcatgcagatatcatcaaattcttctcccaatacaaagcaatgattagtgacatgaga |
45460819 |
T |
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| Q |
109 |
ctagttgtcacaagcattccacatattatagccaaacctgccacaaattgtgaacttaattaattacactattatgattttaatgtcattaacaaacaat |
208 |
Q |
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| T |
45460818 |
ctagttgtcacaagcattccacatattatagccaaacctaccacaaattgtgaacttaattaattacactattatgattttaatgtcattaacaaacgat |
45460719 |
T |
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| Q |
209 |
catgctaactgaatggtaaacaagttccatataaccatcctta |
251 |
Q |
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| T |
45460718 |
catgctaactgaatggtaaacaagttccatataaccatcctta |
45460676 |
T |
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