View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20150_low_11 (Length: 289)
Name: NF20150_low_11
Description: NF20150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20150_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 11187577 - 11187823
Alignment:
| Q |
1 |
tatcttaaattagggattccactatgagtcgaaaatcatccaagctcacagctccatcaccatccatatcaagagaagcaacaacattctcacatttctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11187577 |
tatcttaaattagggattccactatgagtcgaaaatcatccaagctcacagctccatcaccatccatatcaagagaagcaacaacattctcacatttctc |
11187676 |
T |
|
| Q |
101 |
taaagacaaagcaagaccaaaatttctcatcgcctcatgtagctcttccccagtcaaaatctcattcccatcttcatccaaagcttcaaatgctgcactt |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11187677 |
taaagacaaagcaagaccaaaatttcccatcgcctcatgtagctcttccccagtcaaaatctcattcccatcttcatccaaagcttcaaatgctgcactt |
11187776 |
T |
|
| Q |
201 |
agaacatttgcaagattcccagtctccaaaccctttgtgttcatctc |
247 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11187777 |
agaacatttgcaagattcccagtctccaaaccctttgtgttcatctc |
11187823 |
T |
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