View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_high_152 (Length: 236)
Name: NF20151_high_152
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_high_152 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 51211276 - 51211073
Alignment:
| Q |
16 |
atgaaccatgttaaattatgaaatgaaaataggaaaatttgaaatccaaattgttctcatcaaaactaaagttgattcttgttgaattagataccaacaa |
115 |
Q |
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| T |
51211276 |
atgaaccatgttaaattatgaaatgaaaataggaaaatttgaaatccaaattgttctcatcaaaactaaagttgattcttgttgaattagataccaacaa |
51211177 |
T |
|
| Q |
116 |
agcacatacttattgcacaaatgaatcaatgacactgatcgaacataatatagacagttggaatgtgatatgacataaatttagaataaaaattactcta |
215 |
Q |
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|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51211176 |
agcacatacttactgcacaaatgaatcgatgacactgatcgaacataatatagacagttggaatgtgatatgacataaatttagaataaaaattactcta |
51211077 |
T |
|
| Q |
216 |
tact |
219 |
Q |
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|||| |
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| T |
51211076 |
tact |
51211073 |
T |
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