View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_high_67 (Length: 354)
Name: NF20151_high_67
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_high_67 |
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Alignment Details
Target: chr1 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 12 - 337
Target Start/End: Original strand, 35695092 - 35695417
Alignment:
| Q |
12 |
gagatgaaggtgtcgtcgttgattgcttcgttggttttgaagaacttgtactgggaagattgtgttatgaattgttggaataaggaattgagtgattgag |
111 |
Q |
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| T |
35695092 |
gagatgaaggtgtcgtcgttgattgcttcgttggttttgaagaacttgtattgggaagattgtgttatgaattgttggaataaggaattgagtgattgag |
35695191 |
T |
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| Q |
112 |
aataagattgatggttgaaggtttgagttgagcatgttttgtatactaatttgttgtaattggaaattggttcagaagaaggtaggaagagcaagaaagt |
211 |
Q |
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| T |
35695192 |
aataagattgatggttgaaggtttgagttgagcatgttttgtatactaatttgttgtaattggaaattggttcagaagaaggtaggaagagcaagaaagt |
35695291 |
T |
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| Q |
212 |
gtaactaatgaagaagatggtggtggaatattgggaaacattcattttggagatggtttattggttcattgttataggatttaatttggtggtttaattt |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35695292 |
gtaactaatgaagaagatggtggtggaatattgggaaacattcattttggagatggtttattggttcattgttataggatttaatttggtggtttaattt |
35695391 |
T |
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| Q |
312 |
tgagacattgatttggaggaaacaac |
337 |
Q |
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| T |
35695392 |
tgagacattgatttggaggaaacaac |
35695417 |
T |
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