View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20151_high_82 (Length: 327)

Name: NF20151_high_82
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20151_high_82
NF20151_high_82
[»] chr1 (21 HSPs)
chr1 (31-327)||(44453777-44454073)
chr1 (31-124)||(32813248-32813341)
chr1 (31-116)||(38632327-38632412)
chr1 (31-116)||(44548382-44548467)
chr1 (31-116)||(51898689-51898774)
chr1 (54-124)||(5959029-5959099)
chr1 (31-116)||(2581924-2582009)
chr1 (55-124)||(50591030-50591099)
chr1 (31-73)||(48489352-48489394)
chr1 (31-116)||(8346394-8346479)
chr1 (31-116)||(9474882-9474967)
chr1 (31-116)||(27564741-27564826)
chr1 (31-116)||(37649207-37649292)
chr1 (31-116)||(38595163-38595248)
chr1 (31-116)||(47452326-47452411)
chr1 (31-116)||(48716288-48716373)
chr1 (42-124)||(37926455-37926537)
chr1 (31-116)||(3000328-3000413)
chr1 (55-124)||(41608523-41608592)
chr1 (55-124)||(47748444-47748512)
chr1 (31-116)||(50630467-50630552)
[»] chr3 (16 HSPs)
chr3 (31-116)||(17470414-17470499)
chr3 (31-124)||(26141538-26141631)
chr3 (31-116)||(49607423-49607508)
chr3 (31-116)||(54868901-54868986)
chr3 (31-124)||(48375712-48375805)
chr3 (31-116)||(53982020-53982105)
chr3 (31-121)||(52629304-52629394)
chr3 (31-124)||(11907372-11907465)
chr3 (31-116)||(14623845-14623930)
chr3 (31-116)||(27714897-27714982)
chr3 (31-116)||(33644209-33644294)
chr3 (35-116)||(48587101-48587182)
chr3 (42-124)||(33118868-33118950)
chr3 (31-116)||(30801739-30801824)
chr3 (60-116)||(11095388-11095444)
chr3 (56-124)||(45058584-45058651)
[»] chr2 (20 HSPs)
chr2 (31-124)||(17820010-17820103)
chr2 (31-116)||(40701487-40701572)
chr2 (46-124)||(26891525-26891603)
chr2 (31-116)||(4060694-4060779)
chr2 (31-116)||(7465741-7465826)
chr2 (31-116)||(10249388-10249473)
chr2 (31-116)||(17473029-17473114)
chr2 (31-116)||(28863464-28863549)
chr2 (31-116)||(32505654-32505739)
chr2 (31-112)||(3439992-3440073)
chr2 (31-116)||(5574494-5574579)
chr2 (31-116)||(9058489-9058574)
chr2 (31-116)||(33436106-33436191)
chr2 (31-124)||(40613908-40614001)
chr2 (55-124)||(43490122-43490191)
chr2 (55-124)||(45097765-45097834)
chr2 (31-116)||(13438352-13438437)
chr2 (31-116)||(28381661-28381746)
chr2 (31-124)||(42257194-42257287)
chr2 (55-103)||(2997517-2997565)
[»] scaffold0237 (1 HSPs)
scaffold0237 (31-116)||(4038-4123)
[»] chr6 (10 HSPs)
chr6 (31-116)||(29857836-29857921)
chr6 (55-124)||(15508054-15508123)
chr6 (55-124)||(15990072-15990141)
chr6 (31-116)||(17598563-17598648)
chr6 (55-124)||(30341390-30341459)
chr6 (31-116)||(32869687-32869772)
chr6 (31-116)||(22880664-22880749)
chr6 (31-124)||(31976249-31976342)
chr6 (31-73)||(23128133-23128175)
chr6 (31-103)||(11427640-11427712)
[»] chr5 (19 HSPs)
chr5 (31-124)||(35943898-35943991)
chr5 (31-116)||(35785208-35785293)
chr5 (31-124)||(6679699-6679792)
chr5 (31-124)||(26720517-26720610)
chr5 (31-124)||(26990266-26990359)
chr5 (31-124)||(38296204-38296297)
chr5 (31-116)||(2740283-2740368)
chr5 (55-124)||(3921295-3921364)
chr5 (31-116)||(18520890-18520975)
chr5 (31-116)||(40145416-40145501)
chr5 (32-99)||(10227901-10227968)
chr5 (55-124)||(2252198-2252267)
chr5 (31-116)||(13811661-13811746)
chr5 (31-116)||(14831823-14831908)
chr5 (31-124)||(28177776-28177869)
chr5 (31-116)||(33149644-33149729)
chr5 (34-116)||(41470425-41470507)
chr5 (31-116)||(36732948-36733033)
chr5 (31-116)||(42414308-42414393)
[»] chr4 (26 HSPs)
chr4 (31-116)||(6034053-6034138)
chr4 (55-124)||(55079744-55079813)
chr4 (32-116)||(50526178-50526262)
chr4 (31-116)||(3481663-3481748)
chr4 (31-116)||(29234251-29234336)
chr4 (55-124)||(32766959-32767028)
chr4 (31-116)||(41236356-41236441)
chr4 (31-116)||(11511468-11511553)
chr4 (55-124)||(19670746-19670815)
chr4 (31-116)||(28480274-28480359)
chr4 (31-116)||(28481149-28481234)
chr4 (31-116)||(28482024-28482109)
chr4 (31-116)||(29239895-29239980)
chr4 (31-116)||(48183055-48183140)
chr4 (31-116)||(50052434-50052519)
chr4 (31-102)||(29977908-29977979)
chr4 (54-124)||(44536775-44536844)
chr4 (54-124)||(50813921-50813991)
chr4 (31-116)||(480453-480538)
chr4 (55-124)||(18924525-18924594)
chr4 (55-124)||(29547989-29548058)
chr4 (55-124)||(47986209-47986278)
chr4 (31-116)||(54473539-54473624)
chr4 (55-124)||(55475192-55475261)
chr4 (55-103)||(17983773-17983821)
chr4 (33-121)||(53352574-53352661)
[»] chr8 (15 HSPs)
chr8 (31-116)||(504127-504212)
chr8 (31-116)||(37038488-37038573)
chr8 (31-116)||(14547931-14548016)
chr8 (55-124)||(16383378-16383447)
chr8 (55-124)||(34307217-34307286)
chr8 (36-124)||(17443826-17443914)
chr8 (31-116)||(12831056-12831141)
chr8 (31-116)||(15197342-15197427)
chr8 (31-116)||(23122603-23122688)
chr8 (31-116)||(34012302-34012387)
chr8 (31-125)||(5957830-5957924)
chr8 (31-73)||(9122237-9122279)
chr8 (31-116)||(1179946-1180031)
chr8 (55-116)||(4854893-4854954)
chr8 (55-124)||(24307823-24307892)
[»] chr7 (26 HSPs)
chr7 (31-116)||(3784004-3784089)
chr7 (31-124)||(18207181-18207273)
chr7 (55-124)||(39255953-39256022)
chr7 (55-124)||(41915742-41915811)
chr7 (33-124)||(41423683-41423774)
chr7 (31-116)||(8080389-8080474)
chr7 (31-116)||(36361919-36362004)
chr7 (31-116)||(38837226-38837311)
chr7 (56-124)||(22343362-22343430)
chr7 (31-109)||(3694383-3694461)
chr7 (43-124)||(12310907-12310986)
chr7 (31-125)||(35522876-35522970)
chr7 (31-116)||(3434571-3434656)
chr7 (31-116)||(7389398-7389483)
chr7 (31-116)||(19329851-19329936)
chr7 (31-116)||(19436193-19436278)
chr7 (31-116)||(36362035-36362120)
chr7 (31-116)||(40957716-40957801)
chr7 (31-124)||(46374808-46374901)
chr7 (57-124)||(38044198-38044265)
chr7 (31-73)||(16374830-16374872)
chr7 (33-102)||(2318251-2318320)
chr7 (31-116)||(4999520-4999605)
chr7 (55-124)||(32564456-32564525)
chr7 (31-116)||(38267049-38267134)
chr7 (60-116)||(10343598-10343654)
[»] scaffold1268 (1 HSPs)
scaffold1268 (31-116)||(935-1020)
[»] scaffold1267 (1 HSPs)
scaffold1267 (31-116)||(935-1020)
[»] scaffold0321 (1 HSPs)
scaffold0321 (89-124)||(10173-10208)
[»] scaffold0018 (1 HSPs)
scaffold0018 (36-109)||(152514-152587)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 44454073 - 44453777
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataacttcttaa 130  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  44454073 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcataacttcttaa 44453974  T
Q  131 cttgtgtacgttgttttttcaacactatacaactttaatttaccctccnnnnnnnnnnnnnnnnnnnnnnntatccttgaatcaacttggcaaaaaagaa 230  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||                       |||||||||||||||||||||||||||||    
T  44453973 tttgtgtatgttgttttttcaacactatacaactttaatttaccctccaaatttaaaaaaagaaaacaaaatatccttgaatcaacttggcaaaaaagaa 44453874  T
Q  231 atatcaactctttctcactctaatatagtgcattacaagaaagataatagagacaagcaaagttgatcctccaagaatcaaaggtggacaaggttgc 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44453873 atatcaactctttctcactctaatatagtgcattacaagaaagataatagagacaagcaaagttgatcctccaagaatcaaaggtggacaaggttgc 44453777  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 32813341 - 32813248
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| |||| || ||||| |||||||||||||| | ||| ||||  ||||||||||||||||| | |||||||||| |||||||    
T  32813341 tgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 32813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 38632327 - 38632412
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | | | |||| |||||||||||||||||| ||||||||||||    
T  38632327 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgta 38632412  T

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Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 44548382 - 44548467
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||||| ||  ||||||||||||||||||| ||||||||||    
T  44548382 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgta 44548467  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 51898689 - 51898774
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||||| ||||||||||    
T  51898689 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgta 51898774  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 5959029 - 5959099
Alignment:
Q  54 accacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||||||||| | ||| | ||||||||||||||||| ||| ||||| |||||| |||||||    
T  5959029 accacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataact 5959099  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 2582009 - 2581924
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  2582009 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 2581924  T

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Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 50591030 - 50591099
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  50591030 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 50591099  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 48489394 - 48489352
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgt 73  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  48489394 tgtgcttgtgcgggatccacgtgaccacatgtcagatttttgt 48489352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 8346394 - 8346479
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||||||  || ||||||| || || |||||||||||||| | ||| | ||  |||||||||||||||||||||| |||||||    
T  8346394 tgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgta 8346479  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 9474882 - 9474967
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  9474882 tgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 9474967  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 27564741 - 27564826
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| |  || |||||||||||||| | ||| | || |||||||||||||||||| | ||||||||||    
T  27564741 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgta 27564826  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 37649292 - 37649207
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| || || ||||| ||||| |||||||||||||| | ||| | ||   |||||||||||||||||| ||||||||||    
T  37649292 tgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgta 37649207  T

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Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 38595248 - 38595163
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||  ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||||||||| ||||||    
T  38595248 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgta 38595163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 47452326 - 47452411
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || ||| |||||||||| | ||| | ||  |||||||| |||||||| ||||||||||||    
T  47452326 tgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgta 47452411  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 48716288 - 48716373
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | | | | ||  ||||||||||||||||| ||||||||||||    
T  48716288 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgta 48716373  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 37926455 - 37926537
Alignment:
Q  42 gggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||| ||  |||| |||||||||||| | | ||| |||| || ||||||||||||||||| | |||||||| |||||||    
T  37926455 gggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataact 37926537  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 3000413 - 3000328
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||  ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||| ||||||    
T  3000413 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgta 3000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 41608523 - 41608592
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| |  || | ||| ||||||||||||||||| | ||| |||||| |||||||    
T  41608523 ccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataact 41608592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 47748512 - 47748444
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||| ||| ||| | ||| ||||||||||||||||| ||| | |||||| |||||||    
T  47748512 ccacatgtcagatttttatatgggtgtcaag-ggtgtattgccacctaagggtatttatgtatcataact 47748444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 50630552 - 50630467
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||||  ||  | ||||||||||||||| ||| ||||||||    
T  50630552 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgta 50630467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 17470499 - 17470414
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||||| || || |||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||    
T  17470499 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgta 17470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 26141538 - 26141631
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||| |||| || ||||| |||||||||||||| | ||| ||||  ||||||||||||||||| | |||||||||| |||||||    
T  26141538 tgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 26141631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 49607508 - 49607423
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||||||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  49607508 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 49607423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 54868901 - 54868986
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||| ||| |||||||||| || |||||||||||||| | ||| | || |||||||||||||||||| ||||||||||||    
T  54868901 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgta 54868986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 48375712 - 48375805
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| |||| || |||||| ||||||||||||||| | | || || ||||||||| ||||||| |||||||||| | |||||||    
T  48375712 tgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataact 48375805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 53982105 - 53982020
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  53982105 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 53982020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 52629394 - 52629304
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacata 121  Q
    |||||||||  ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| |||||||||||| ||||    
T  52629394 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 11907465 - 11907372
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| ||||  | |||||||||||||||||||| |  || || ||  |||||||| ||||||| |||||||||||| |||||||    
T  11907465 tgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataact 11907372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 14623845 - 14623930
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||| | ||||| | | |||||||||||||||| | | ||| | ||| ||||||||||||||||| | ||||||||||    
T  14623845 tgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgta 14623930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 27714897 - 27714982
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||| | || || |||||||||||||| | ||| | ||  |||||||| |||||||||||||||||||||    
T  27714897 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgta 27714982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 33644294 - 33644209
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  |||||||||||||| || ||||||||||||    
T  33644294 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgta 33644209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 48587101 - 48587182
Alignment:
Q  35 cttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||| ||||||||||| || || |||||||||||| | ||||| | ||  ||||||||||||||||| ||| ||||||||    
T  48587101 cttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgta 48587182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 33118868 - 33118950
Alignment:
Q  42 gggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||| || || ||||| |||||||| | ||| | ||  ||||||||| ||||||| |||||||||||| |||||||    
T  33118868 gggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataact 33118950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 30801739 - 30801824
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||  | || |||||||| |||||||| | ||||| ||  ||||||||  ||||||| ||||||||||||    
T  30801739 tgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgta 30801824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 11095388 - 11095444
Alignment:
Q  60 tgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  11095388 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 11095444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 45058584 - 45058651
Alignment:
Q  56 cacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||||| | | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  45058584 cacatgtcagatttttatgtgggtgtcaag-ggtgtattgccacctaagggtgtttatgtatcataact 45058651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 17820010 - 17820103
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||| ||||||||| |||||||||||||||||||||||||||| | ||| | ||| |||||||||||||||| || |||||||||| |||||||    
T  17820010 tgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataact 17820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 40701572 - 40701487
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||| ||| |||||||||| || |||||||||||||| | ||| | || |||||||||||||||||| ||||||||||||    
T  40701572 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgta 40701487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 26891525 - 26891603
Alignment:
Q  46 tccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||| |||||||||||||||||||| | ||| |  || ||||||||||||||||| |||| ||||||| |||||||    
T  26891525 tccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataact 26891603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 4060779 - 4060694
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||| || |||||||||||||| || |||||||||||||| | | | | || |||||||||| ||||||| ||||||||||||    
T  4060779 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgta 4060694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 7465741 - 7465826
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||||| || || |||||||||||||| | ||| | ||  |||||||||||| |||| ||||||||||||    
T  7465741 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgta 7465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 10249388 - 10249473
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | || |||||||||| ||||||| ||||||||||||    
T  10249388 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgta 10249473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 17473114 - 17473029
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||||| | ||| | ||  |||||||||||| |||| ||||||||||||    
T  17473114 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgta 17473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 28863549 - 28863464
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  28863549 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 28863464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 32505654 - 32505739
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | || |||||||||| ||||||| ||||||||||||    
T  32505654 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgta 32505739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 3440073 - 3439992
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtcta 112  Q
    |||||||||| ||| ||||||||| ||||||| |||||||||| | ||| |  ||  |||||||||||||||| ||||||||    
T  3440073 tgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtcta 3439992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 5574494 - 5574579
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||| | | ||| | ||  |||||||||||||||||  |||||||||||    
T  5574494 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgta 5574579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 9058574 - 9058489
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||| | || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  9058574 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 9058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 33436106 - 33436191
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || ||| |||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  33436106 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 33436191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 40613908 - 40614001
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| |||| ||  |||| |||||||||||||| | ||| | ||  ||||||||||||||||| | |||||||||| |||||||    
T  40613908 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 40614001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 43490191 - 43490122
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||| ||||||| ||||| |||||| |||||||    
T  43490191 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataact 43490122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 45097765 - 45097834
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||||| ||| | ||| | ||||||||||||||| | ||| |||||| |||||||    
T  45097765 ccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataact 45097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 13438437 - 13438352
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  | ||||||| ||||||| ||||||||||||    
T  13438437 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgta 13438352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 28381661 - 28381746
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||  |||| || || || |||||||||||||| | ||| |  | |||||||||||||||||| ||||||||||||    
T  28381661 tgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgta 28381746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 42257287 - 42257194
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| |||| ||  |||| |||||||||||| | | ||| | ||  | ||||||||||||||||| |||||||||| |||||||    
T  42257287 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataact 42257194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 2997517 - 2997565
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaa 103  Q
    ||||||||||||||||||| | ||| | ||| |||||||||||||||||    
T  2997517 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 2997565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 4123 - 4038
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||| || |||||||||||||| || |||||||||||||| | ||| |||| ||||||||||||| |||||||||||||||||    
T  4123 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgta 4038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 29857921 - 29857836
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||| || |||||||||||||| || |||||||||||||| | ||| |||| ||||||||||||| |||||||||||||||||    
T  29857921 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgta 29857836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 15508054 - 15508123
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  15508054 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 15508123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 15990072 - 15990141
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  15990072 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 15990141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 17598648 - 17598563
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | || || ||||||||||||||| ||||||||||||    
T  17598648 tgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgta 17598563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 30341390 - 30341459
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  30341390 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 30341459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 32869772 - 32869687
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  32869772 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 32869687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 22880664 - 22880749
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || ||||||| |||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  22880664 tgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 22880749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 31976342 - 31976249
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| | || || ||||| |||||||||||||| | ||| ||||  ||| ||||||||||||| | |||||||||| |||||||    
T  31976342 tgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataact 31976249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 23128133 - 23128175
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgt 73  Q
    |||||||||||||||||||||| || || ||||||||||||||    
T  23128133 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgt 23128175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 11427712 - 11427640
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaa 103  Q
    |||||||||| ||||||||||| || || |||||||||||||| | ||| | ||  | |||||||||||||||    
T  11427712 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaa 11427640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 35943898 - 35943991
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||||||||| || |||||||||||||| | ||| | ||  | ||||||||||||||| |||||||||||| |||||||    
T  35943898 tgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataact 35943991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 35785293 - 35785208
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||| |||||||||||||| || |||||||||||||| | ||| | || |||||||||||||||||| ||||||||||||    
T  35785293 tgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgta 35785208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 6679792 - 6679699
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||| ||||| ||| |||| || ||||| |||||||||||||| | ||| | || |||||||||||||||||||| |||||||||| |||||||    
T  6679792 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataact 6679699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 26720610 - 26720517
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| |||||||| ||  |||| |||||||||||| | ||||| ||||  ||||||||||||||||| | |||||||||| |||||||    
T  26720610 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 26720517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 26990359 - 26990266
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| |||||||| ||  |||| |||||||||||| | ||||| ||||  ||||||||||||||||| | |||||||||| |||||||    
T  26990359 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 26990266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 38296297 - 38296204
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||| ||||||||||| | || |||| ||||||||| | ||||||||||||||||||| |||||||    ||||||||| |||||||    
T  38296297 tgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataact 38296204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 2740368 - 2740283
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| | ||||||||||    
T  2740368 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgta 2740283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 3921295 - 3921364
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  3921295 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 3921364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 18520890 - 18520975
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  18520890 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 18520975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 40145501 - 40145416
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | | | ||||  ||||||||||||||||| ||||||||||||    
T  40145501 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgta 40145416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 10227901 - 10227968
Alignment:
Q  32 gtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccac 99  Q
    |||||||||||| |||||| ||| |||||||||||||||||||| ||| | ||| | |||||||||||    
T  10227901 gtgcttgtgtggaatccacataatcacatgtcagatttttgtatcggtgtcaagggatgtattgccac 10227968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 2252198 - 2252267
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| | ||| |||||| |||||||    
T  2252198 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataact 2252267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 13811746 - 13811661
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  | ||||||||||||||| ||||||||||||    
T  13811746 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgta 13811661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 14831908 - 14831823
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||| | | ||| | ||  |||||||||||||||||  |||||||||||    
T  14831908 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgta 14831823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 28177869 - 28177776
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||| ||||| ||| |||| || ||||| |||||||||||||| | ||| | ||  ||||||||||||||||| | |||||||||| |||||||    
T  28177869 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 28177776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 33149644 - 33149729
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || ||||| |||||||| | ||| | ||  |||||||| |||||||| ||||||||||||    
T  33149644 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgta 33149729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 41470425 - 41470507
Alignment:
Q  34 gcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||| ||| ||||||| || || |||||||||||| |||   | ||||  | ||||||||||||||||||||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgta 41470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 36732948 - 36733033
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || |  |||||||||||||| | ||| | ||  |||||||||| |||||| ||||||||||||    
T  36732948 tgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgta 36733033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 42414308 - 42414393
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||| | || || |||||||||||||| | ||| | ||  ||||||||||||||||  ||||||||||||    
T  42414308 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgta 42414393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 6034138 - 6034053
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || ||||||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  6034138 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 6034053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 55079744 - 55079813
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||| |||||| |||||||    
T  55079744 ccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataact 55079813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 50526178 - 50526262
Alignment:
Q  32 gtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||||| || |||||||| ||||| |||||||||||||| | ||| | ||  ||||||||||||||||||| ||||||||||    
T  50526178 gtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgta 50526262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 3481748 - 3481663
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||||| || |  |||||||||||||| | ||| | ||   |||||||||||||||||||||||||||||    
T  3481748 tgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgta 3481663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 29234251 - 29234336
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || ||||||||||||||  |||||| ||  |||||||||||| |||| ||||||||||||    
T  29234251 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgta 29234336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 32767028 - 32766959
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||||| ||| | ||| |||||||||||||||||  |||| |||||| |||||||    
T  32767028 ccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataact 32766959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 41236441 - 41236356
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | | | | || |||||||||||||||||| ||||||||||||    
T  41236441 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgta 41236356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 11511468 - 11511553
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||| | | ||| | ||  ||||||||||||||||| ||||||||||||    
T  11511468 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgta 11511553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 19670746 - 19670815
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| |  || | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  19670746 ccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 19670815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 28480274 - 28480359
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||||||| ||||| | || ||||||||||||||||| |  || |||||| |||||||| ||||||| | ||||||||||    
T  28480274 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgta 28480359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 28481149 - 28481234
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||||||| ||||| | || ||||||||||||||||| |  || |||||| |||||||| ||||||| | ||||||||||    
T  28481149 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgta 28481234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 28482024 - 28482109
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||||||| ||||| | || ||||||||||||||||| |  || |||||| |||||||| ||||||| | ||||||||||    
T  28482024 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgta 28482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 29239980 - 29239895
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||||| || || ||| |||||||||| | | | | ||  ||||||||||||||||| ||||||||||||    
T  29239980 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgta 29239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 48183055 - 48183140
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||| ||| ||||||||||||    
T  48183055 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgta 48183140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 50052434 - 50052519
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| | ||||||||||    
T  50052434 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgta 50052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 29977979 - 29977908
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccaccta 102  Q
    |||||||||||||| ||||  | || || |||||||||||||| | ||| ||||| ||||||||||||||||    
T  29977979 tgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 29977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 44536775 - 44536844
Alignment:
Q  54 accacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||||||||| | | | | ||| |||||||||||||||||| |||| |||||| |||||||    
T  44536775 accacatgtcagatttttgtgtggatgtcaag-ggtgtattgccacctaaaagtgtttatgtatcataact 44536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 50813921 - 50813991
Alignment:
Q  54 accacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||||||||| | ||| | ||| |||||||| ||||||||  |||| |||||| |||||||    
T  50813921 accacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataact 50813991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 480453 - 480538
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||  ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||| ||||||| ||||||||||||    
T  480453 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgta 480538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 18924525 - 18924594
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | | ||| ||| ||||||||||||||||| ||| | |||| | |||||||    
T  18924525 ccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataact 18924594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 29547989 - 29548058
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| | ||||||||||||||| | ||| |||||| |||||||    
T  29547989 ccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataact 29548058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 47986278 - 47986209
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | | | | ||| | ||||||||||||||| ||||| |||||| |||||||    
T  47986278 ccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataact 47986209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 54473539 - 54473624
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || ||| |||||||||| | ||| | ||  ||||||||| ||||||| ||||||||||||    
T  54473539 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgta 54473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 55475261 - 55475192
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||  ||||||||||||||||| | ||| |||||| |||||||    
T  55475261 ccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataact 55475192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 17983773 - 17983821
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaa 103  Q
    ||||||||||||||||||| | ||| | ||| |||||||||||||||||    
T  17983773 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaa 17983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 53352574 - 53352661
Alignment:
Q  33 tgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacata 121  Q
    |||||||| ||| ||||| |||| || |||||||||||||| ||||| ||||    ||||||| ||||||| |||||||||||| ||||    
T  53352574 tgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 504127 - 504212
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | || |||||||||||||||||| ||||||||||||    
T  504127 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgta 504212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 37038573 - 37038488
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||||| ||||||||||    
T  37038573 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgta 37038488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 14548016 - 14547931
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||||||||||| ||||||||||||    
T  14548016 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgta 14547931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 16383447 - 16383378
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  16383447 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 16383378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 34307286 - 34307217
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  34307286 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 34307217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 17443914 - 17443826
Alignment:
Q  36 ttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||| ||||| | || ||||||||||||||||| |  || |||||| |||||||| ||||||| | |||||||||| |||||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataact 17443826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 12831141 - 12831056
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||| ||||||| ||||||||||||    
T  12831141 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgta 12831056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 15197427 - 15197342
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  |||||||||||||||||  |||||||||||    
T  15197427 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgta 15197342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 23122603 - 23122688
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||| || ||| ||||||| || || |||||||||||||| | ||| | || |||||||||||||| ||| ||||||||||||    
T  23122603 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgta 23122688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 34012302 - 34012387
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || ||||| |||||||| | ||| | ||  |||||||| |||||||| ||||||||||||    
T  34012302 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgta 34012387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 5957924 - 5957830
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataactt 125  Q
    |||| ||||| ||||||||||| || || |||||||||||||| | ||| | ||  |||||||||||||||||   |||||||||| ||| ||||    
T  5957924 tgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattactt 5957830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9122279 - 9122237
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgt 73  Q
    |||||||||| ||||||||||| || |||||||||||||||||    
T  9122279 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgt 9122237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 1179946 - 1180031
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| || |||||| | || || |||||||||||||| | ||| | ||  |||||||| |||||||| ||||||||||||    
T  1179946 tgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgta 1180031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 4854893 - 4854954
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||| |||||||||| | ||||| ||||  ||||||||||||||||| | ||||||||||    
T  4854893 ccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgta 4854954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 24307823 - 24307892
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||| |||||||||||| | ||| | ||| | ||||||||||||||| ||||| |||||| |||||||    
T  24307823 ccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataact 24307892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 3784089 - 3784004
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||||||||||| | ||| | || || ||||||||||||||| ||||||||||||    
T  3784089 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgta 3784004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 18207273 - 18207181
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||| | |||||  |||| ||| |||||||||||| ||| | ||||||||||||||||||||| | |||||||||| |||||||    
T  18207273 tgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataact 18207181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 39255953 - 39256022
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||| |||||||||||||||| ||||| ||| ||||||||||||||||| | |||||||||| |||||||    
T  39255953 ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataact 39256022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 41915811 - 41915742
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| ||||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  41915811 ccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 41915742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 41423774 - 41423683
Alignment:
Q  33 tgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||  |||||| |||| |||||||||||||||||||| || || | |||||||||||| ||| |||| | |||||||||| |||||||    
T  41423774 tgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataact 41423683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 8080389 - 8080474
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||| | ||||| | ||  ||||||||||||||||| ||||||||||||    
T  8080389 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgta 8080474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 36361919 - 36362004
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||||| || || |||||||||||||| | ||| | ||  | ||||||||||||||| ||||||||||||    
T  36361919 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgta 36362004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 38837311 - 38837226
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| ||||| |  |  ||||||||||||||||| ||||||||||||    
T  38837311 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgta 38837226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 22343430 - 22343362
Alignment:
Q  56 cacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||||||| | ||| | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  22343430 cacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 22343362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 3694461 - 3694383
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgt 109  Q
    |||||||||| ||||||||| | || || |||||||||||||| | ||| |||| |||||||||| ||||||| |||||    
T  3694461 tgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgt 3694383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 12310986 - 12310907
Alignment:
Q  43 ggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| |||||||||||||||||||||| | |||  |||  | |||| |||||||| |||||||||||| |||||||    
T  12310986 ggatccacgtgaccacatgtcagatttttgtatggatatccaga--tatatttccacctaagggtgtctatgtatcataact 12310907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 35522970 - 35522876
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataactt 125  Q
    |||||||||| ||||||||  |  |||| |||||||||||||| | ||| ||||  ||||||||||||| ||| | |||||||||| ||||||||    
T  35522970 tgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataactt 35522876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 3434656 - 3434571
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||||||||| || || |||||| ||||||| | ||| | ||  ||||||||||||||||| | ||||||||||    
T  3434656 tgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgta 3434571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 7389483 - 7389398
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||   |||||||||||||||| ||||||||||||    
T  7389483 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgta 7389398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 19329936 - 19329851
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| |  || |||||||||||||| | ||| | || |||||||||||||||||| | ||||||||||    
T  19329936 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgta 19329851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 19436193 - 19436278
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    ||||||| || ||||||||||| || || |||||||||||||| | ||| | || |||||||||| ||||||| | ||||||||||    
T  19436193 tgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgta 19436278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 36362120 - 36362035
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| ||||||| || || |||||||||||||| | ||| | ||  | |||||| |||||||| ||||||||||||    
T  36362120 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgta 36362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 40957801 - 40957716
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||  ||||||||||| || || |||||||||||||| | ||||| ||   ||||||||||||||||  |||||||||||    
T  40957801 tgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgta 40957716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 46374808 - 46374901
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||| ||| |||| ||  |||| |||||||||||||| | ||| ||||  ||||| ||||||||||| | |||||||||| |||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataact 46374901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 38044265 - 38044198
Alignment:
Q  57 acatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||| | | | | ||| ||||||||||||||||| ||||| |||||| |||||||    
T  38044265 acatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 38044198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 16374830 - 16374872
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgt 73  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||    
T  16374830 tgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgt 16374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 2318251 - 2318320
Alignment:
Q  33 tgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccaccta 102  Q
    ||||| ||| || ||||||| |||||| ||||||||||||| | ||| | ||||||||| ||||||||||    
T  2318251 tgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccaccta 2318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 4999520 - 4999605
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||| ||||| ||| ||||||| || || | |||||||||||| | ||| | || ||||||||||||| |||| ||||||||||||    
T  4999520 tgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgta 4999605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 32564456 - 32564525
Alignment:
Q  55 ccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgtaacataact 124  Q
    ||||||||||||||||||| | ||| | ||| |||||||||||||||||   ||| |||||| |||||||    
T  32564456 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataact 32564525  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 38267134 - 38267049
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||| ||||||| || || |||||||||||||| | ||| | ||  ||||||||| ||| ||| ||||||||||||    
T  38267134 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgta 38267049  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 10343598 - 10343654
Alignment:
Q  60 tgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||||||| | ||| | |||| ||||||| |||||||| ||||||||||||    
T  10343598 tgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgta 10343654  T

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Target: scaffold1268 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 935 - 1020
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||| ||||| || || |||||| ||||||| | | | ||||  ||||||||||||||||||| ||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgta 1020  T

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Target: scaffold1267 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 935 - 1020
Alignment:
Q  31 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgtctatgta 116  Q
    |||||||||| ||||| ||||| || || |||||| ||||||| | | | ||||  ||||||||||||||||||| ||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgta 1020  T

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Target: scaffold0321 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 10173 - 10208
Alignment:
Q  89 tgtattgccacctaaaggtgtctatgtaacataact 124  Q
    |||||||||||||||||||||||||||| |||||||    
T  10173 tgtattgccacctaaaggtgtctatgtatcataact 10208  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 152587 - 152514
Alignment:
Q  36 ttgtgtgggatccacgtaaccacatgtcagatttttgtataggtattaagaggtgtattgccacctaaaggtgt 109  Q
    ||||| ||||||||  | |||||||||||||||||||| | ||| | ||| |||||||||||||| || |||||    
T  152587 ttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

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