View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_high_84 (Length: 321)
Name: NF20151_high_84
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_high_84 |
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Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 4321879 - 4321570
Alignment:
| Q |
1 |
cttaattatccttaattgtatcttgttgtgtctcctaaatagtgttacttagcctacaacaaagaggcgaatgccgtatgcaacatcaacggcagcccat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4321879 |
cttaattatccttaattgtatcttgttgtgtctcctaaatagtgttacttagcctacaacaaagaggcgaatgccgtatgcaacatcaacggcagcccat |
4321780 |
T |
|
| Q |
101 |
caaaacggtaccaagttgacaaagaccggtacttgttatgggttgctgttcttgaggaacaggacacactgctccgtttcttgaatttagtcgatgaagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4321779 |
caaaacggtaccaagttgacaaagaccggtacttgttatgggttgctgttcttgcggaacaggacacactgctccgtttcttgaatttagtcgatgaagg |
4321680 |
T |
|
| Q |
201 |
gaatgattttggggtggatggcgacatgtgtatgggcattgtggtcattgttgttggggttcaagttctacctacttactctatttcattgtttacctag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4321679 |
gaatgattttggggtggatggcgacatgtgtatgggcattgtggtcattgttgttggggttcaagttctacctacttactctatttcattgtttacctag |
4321580 |
T |
|
| Q |
301 |
ttctgttcat |
310 |
Q |
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|||||||||| |
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| T |
4321579 |
ttctgttcat |
4321570 |
T |
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