View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_low_120 (Length: 277)
Name: NF20151_low_120
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_low_120 |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 26689834 - 26690103
Alignment:
| Q |
1 |
ttgctttcctctattggctttactacgtttcatgatttttaatccctcatagtttaaacctatatcatctatatctatatcataaaaataatcaaatttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26689834 |
ttgctttcctctattggctttactacgtttcatgattgttaatccctcatagtttaaacctatatcatctatatctatatcataaaaataatcaaatttt |
26689933 |
T |
|
| Q |
101 |
atatttctgcagtattaatttttctgagtttgttatttaatattttc--tagtgtctgggtcctgctagtgtttttatctttgttgtttattagtattaa |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
26689934 |
atatttctgcagtattaatttttctgagtttgttatttaatattttctatagtgtctgggtcctgctagtgtttttatctttgttg-ttattagtattaa |
26690032 |
T |
|
| Q |
199 |
ttattaagagggtcaagttaattaatatctcatcatggcttcatcaagtggaacatcttcaggttcatctc |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26690033 |
ttattaagagggtcaagttaattaatatctcatcatggcttcatcaagtggaacatcttcaggttcatctc |
26690103 |
T |
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