View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_low_139 (Length: 253)
Name: NF20151_low_139
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_low_139 |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 9698972 - 9698728
Alignment:
| Q |
1 |
agaaatgaatgctattgatgaagttttccaaacttcgcgcgccatgtttgttgtcgccttgtttggaacattccccggttattggttcactgttttcttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9698972 |
agaaatgaatgctattgatgaagttttccaaacttcgcgcgccatgtttgttgtcgccttgtttggaacattccccggttattggttcactgttttcttc |
9698873 |
T |
|
| Q |
101 |
attgaaaagcttggaagattcaagatacagttggttggtttcttcatgatgtctttcttcatgtttgtcattggtgttaaatatgaatacttgaaagacg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9698872 |
attgaaaagcttggaagattcaagatacagttggttggtttcttcatgatgtctttcttcatgtttgtcattggtgttaaatatgaatacttgaaagacg |
9698773 |
T |
|
| Q |
201 |
aaaacaaaaacctcttcgctcttttatacgggctaacattcttct |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9698772 |
aaaacaaaaacctcttcgctcttttatacgggctaacattcttct |
9698728 |
T |
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