View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_low_145 (Length: 250)
Name: NF20151_low_145
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_low_145 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 7336209 - 7336444
Alignment:
| Q |
15 |
tataaccaaggaaactagctagctagtggaaaatgattaaagaaagagagataaaaagattgtacaacattaaataatccgtcaattcccaaggatctct |
114 |
Q |
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| T |
7336209 |
tataactaaggaagctagctagctagtggaaaatgattaaagaaagagagataaaaagattgtacaacattaaataatccgtcaattcccaaggatctct |
7336308 |
T |
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| Q |
115 |
ataactacctctcaactaatttccctttttaatactactttcttccattgtttctctcattaattcttcttcattcatatctccaacatgtcaaattcag |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7336309 |
ataactacctctcaactaatttccctttttaatactactttcttccattgtttctctcattaattcttcttcattcatatctccaacatgtcaaattcag |
7336408 |
T |
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| Q |
215 |
agctatttcacatcaaagatgacaaagaagagtgta |
250 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
7336409 |
agctatttcacatcaaagatgacaaagaagagtgta |
7336444 |
T |
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