View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_low_171 (Length: 234)
Name: NF20151_low_171
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_low_171 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 11379971 - 11380172
Alignment:
| Q |
15 |
aagaatcaagtgataccaaaaacaactctcctggttggcgaccgatattcctttatggaggggctgctgtaaacagcactgtaggtgccaagggatcaac |
114 |
Q |
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| T |
11379971 |
aagaatcaagtgataccaaaaacaactctcctggttggcgaccgatattcctttatggaggggctgccgtaaacagcactgtaggtgccaagggatcaac |
11380070 |
T |
|
| Q |
115 |
aggaaatcaaaagttatatggtactgtcacctcaacaggagctggtaagcggtttacattggcagaaatcaacgctgcaacaaataatttcgacgacagt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11380071 |
aggaaatcaaaagttatatggtactgtcacctcaacaggagctggtaagcggtttacattggcagaaatcaacgctgcaacaaataatttcgacgacagt |
11380170 |
T |
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| Q |
215 |
tt |
216 |
Q |
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|| |
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| T |
11380171 |
tt |
11380172 |
T |
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