View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20151_low_25 (Length: 500)

Name: NF20151_low_25
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20151_low_25
NF20151_low_25
[»] chr4 (43 HSPs)
chr4 (1-500)||(54982114-54982612)
chr4 (1-451)||(49263221-49263684)
chr4 (53-327)||(9089141-9089423)
chr4 (165-451)||(49299326-49299617)
chr4 (1-240)||(50721131-50721375)
chr4 (1-242)||(24073751-24073995)
chr4 (162-451)||(1821077-1821357)
chr4 (99-444)||(53393631-53393979)
chr4 (162-451)||(19443052-19443334)
chr4 (162-451)||(38839903-38840195)
chr4 (257-443)||(9808039-9808224)
chr4 (102-241)||(2493427-2493570)
chr4 (264-451)||(17330845-17331032)
chr4 (258-451)||(45666729-45666921)
chr4 (284-447)||(24073343-24073507)
chr4 (162-451)||(47943966-47944245)
chr4 (162-444)||(34031481-34031776)
chr4 (53-451)||(38044252-38044641)
chr4 (162-346)||(25494118-25494306)
chr4 (278-443)||(50721376-50721541)
chr4 (257-451)||(6949450-6949631)
chr4 (276-451)||(37209550-37209724)
chr4 (317-451)||(46430407-46430542)
chr4 (367-451)||(9088751-9088835)
chr4 (306-414)||(41503030-41503139)
chr4 (162-238)||(41502866-41502942)
chr4 (162-241)||(33889909-33889991)
chr4 (378-447)||(25494305-25494374)
chr4 (382-451)||(46196526-46196595)
chr4 (316-451)||(38433847-38433982)
chr4 (160-238)||(45635133-45635211)
chr4 (316-451)||(55344062-55344199)
chr4 (162-205)||(45666638-45666681)
chr4 (274-414)||(53370095-53370234)
chr4 (258-314)||(30912827-30912883)
chr4 (291-414)||(33890060-33890182)
chr4 (255-346)||(20782861-20782952)
chr4 (317-399)||(31104810-31104893)
chr4 (264-302)||(33809360-33809398)
chr4 (269-346)||(22349374-22349450)
chr4 (316-451)||(24537910-24538044)
chr4 (358-414)||(2685141-2685198)
chr4 (96-129)||(5741365-5741398)
[»] chr7 (37 HSPs)
chr7 (1-448)||(4567541-4567995)
chr7 (1-451)||(16197013-16197466)
chr7 (53-448)||(10534432-10534839)
chr7 (84-444)||(35792519-35792897)
chr7 (162-451)||(2271344-2271623)
chr7 (162-451)||(27723614-27723894)
chr7 (258-449)||(39618114-39618304)
chr7 (268-451)||(3835256-3835440)
chr7 (284-451)||(37124627-37124794)
chr7 (254-414)||(41690203-41690364)
chr7 (256-451)||(28226735-28226931)
chr7 (178-347)||(12394563-12394736)
chr7 (57-240)||(37124454-37124649)
chr7 (254-414)||(2798785-2798946)
chr7 (271-413)||(47541883-47542034)
chr7 (264-347)||(8614631-8614713)
chr7 (53-134)||(12394421-12394502)
chr7 (257-411)||(2273282-2273434)
chr7 (258-414)||(43368971-43369126)
chr7 (367-451)||(12394783-12394867)
chr7 (367-451)||(33258950-33259034)
chr7 (316-451)||(15643634-15643769)
chr7 (316-425)||(39434429-39434539)
chr7 (258-342)||(41747023-41747107)
chr7 (162-240)||(4678711-4678789)
chr7 (317-412)||(46671678-46671775)
chr7 (268-451)||(17270042-17270225)
chr7 (258-335)||(7808817-7808894)
chr7 (316-413)||(4962594-4962691)
chr7 (286-420)||(10025844-10025979)
chr7 (1-45)||(35792925-35792969)
chr7 (368-414)||(1752094-1752140)
chr7 (316-346)||(24393807-24393837)
chr7 (258-335)||(39599478-39599558)
chr7 (162-192)||(41690133-41690163)
chr7 (316-345)||(4678860-4678889)
chr7 (280-328)||(21529213-21529261)
[»] chr2 (46 HSPs)
chr2 (1-451)||(16806040-16806491)
chr2 (1-451)||(16845321-16845772)
chr2 (55-230)||(21252861-21253040)
chr2 (1-325)||(45272930-45273275)
chr2 (53-194)||(38588974-38589118)
chr2 (288-451)||(1397936-1398095)
chr2 (284-446)||(3309418-3309580)
chr2 (255-451)||(11084315-11084512)
chr2 (284-444)||(29408342-29408501)
chr2 (162-240)||(3309558-3309636)
chr2 (254-451)||(42871908-42872102)
chr2 (162-240)||(29408479-29408557)
chr2 (255-399)||(25713867-25714013)
chr2 (255-451)||(20170918-20171109)
chr2 (162-243)||(32113132-32113213)
chr2 (173-241)||(4316953-4317021)
chr2 (286-443)||(41541621-41541779)
chr2 (316-451)||(12412943-12413080)
chr2 (316-451)||(12425003-12425140)
chr2 (286-451)||(21253030-21253194)
chr2 (73-132)||(41541353-41541412)
chr2 (162-240)||(7485913-7485991)
chr2 (257-346)||(4700776-4700864)
chr2 (162-240)||(25965465-25965543)
chr2 (162-240)||(27746816-27746894)
chr2 (264-448)||(25713500-25713686)
chr2 (255-420)||(44898600-44898766)
chr2 (316-417)||(45271876-45271978)
chr2 (183-239)||(1397830-1397886)
chr2 (264-451)||(15507882-15508070)
chr2 (316-451)||(34424382-34424518)
chr2 (316-414)||(4959020-4959119)
chr2 (257-308)||(149989-150040)
chr2 (173-224)||(11084222-11084273)
chr2 (264-343)||(36243626-36243705)
chr2 (202-240)||(33660062-33660100)
chr2 (162-199)||(1397778-1397815)
chr2 (80-132)||(33024568-33024620)
chr2 (371-451)||(33660661-33660741)
chr2 (368-411)||(157652-157695)
chr2 (194-240)||(4959190-4959236)
chr2 (316-346)||(25965361-25965391)
chr2 (359-451)||(4317140-4317233)
chr2 (202-243)||(15507816-15507857)
chr2 (80-132)||(25714088-25714138)
chr2 (96-132)||(33660029-33660065)
[»] chr3 (52 HSPs)
chr3 (3-451)||(16236996-16237455)
chr3 (53-451)||(37030374-37030778)
chr3 (162-451)||(45646915-45647208)
chr3 (123-451)||(5493905-5494235)
chr3 (162-451)||(27817755-27818054)
chr3 (162-451)||(45667752-45668054)
chr3 (53-451)||(21933910-21934338)
chr3 (257-451)||(2599478-2599673)
chr3 (265-451)||(2094196-2094385)
chr3 (162-448)||(42735026-42735312)
chr3 (254-451)||(34669095-34669294)
chr3 (202-451)||(296815-297065)
chr3 (53-241)||(38750701-38750898)
chr3 (181-451)||(45759065-45759340)
chr3 (53-134)||(34668959-34669040)
chr3 (294-451)||(38750461-38750618)
chr3 (255-414)||(1405299-1405462)
chr3 (284-451)||(27264247-27264413)
chr3 (1-134)||(2599282-2599414)
chr3 (291-451)||(9589211-9589375)
chr3 (264-443)||(376140-376319)
chr3 (76-147)||(45759639-45759710)
chr3 (316-451)||(7259305-7259442)
chr3 (254-329)||(6749359-6749434)
chr3 (254-329)||(6472367-6472440)
chr3 (291-346)||(21916015-21916070)
chr3 (162-216)||(21915851-21915905)
chr3 (257-347)||(22722256-22722346)
chr3 (162-236)||(25841674-25841748)
chr3 (162-239)||(34823815-34823890)
chr3 (53-134)||(9589050-9589131)
chr3 (316-451)||(21959328-21959464)
chr3 (285-347)||(19229368-19229430)
chr3 (367-441)||(34823612-34823686)
chr3 (173-225)||(6472467-6472519)
chr3 (315-414)||(25841507-25841604)
chr3 (53-132)||(296739-296818)
chr3 (86-125)||(5493856-5493895)
chr3 (288-414)||(633076-633202)
chr3 (173-227)||(6512294-6512348)
chr3 (173-227)||(6749284-6749338)
chr3 (194-240)||(7259512-7259558)
chr3 (274-328)||(12568817-12568871)
chr3 (380-434)||(12568923-12568977)
chr3 (274-328)||(13545281-13545335)
chr3 (380-434)||(13545387-13545441)
chr3 (286-335)||(1272672-1272721)
chr3 (96-129)||(18671600-18671633)
chr3 (1-45)||(5493782-5493826)
chr3 (367-399)||(19229316-19229348)
chr3 (379-451)||(34824239-34824311)
chr3 (1-41)||(42735428-42735468)
[»] chr1 (43 HSPs)
chr1 (55-444)||(13254159-13254566)
chr1 (254-451)||(41117405-41117603)
chr1 (53-302)||(40518764-40519023)
chr1 (258-448)||(6295200-6295391)
chr1 (284-451)||(36319446-36319613)
chr1 (5-163)||(6295447-6295604)
chr1 (11-230)||(36319601-36319820)
chr1 (289-451)||(39386986-39387149)
chr1 (162-302)||(52415450-52415590)
chr1 (291-451)||(52415605-52415767)
chr1 (163-243)||(30280921-30281001)
chr1 (264-347)||(10430194-10430277)
chr1 (264-451)||(19270107-19270292)
chr1 (264-347)||(45925840-45925923)
chr1 (258-451)||(4395534-4395726)
chr1 (270-412)||(11795508-11795650)
chr1 (162-239)||(4671726-4671803)
chr1 (293-442)||(23698858-23699008)
chr1 (294-414)||(40518628-40518747)
chr1 (71-134)||(19269983-19270046)
chr1 (162-243)||(32769304-32769383)
chr1 (359-451)||(11817499-11817592)
chr1 (257-414)||(2752078-2752235)
chr1 (291-451)||(4671872-4672033)
chr1 (160-238)||(2656042-2656120)
chr1 (306-411)||(32769462-32769569)
chr1 (297-429)||(30281082-30281213)
chr1 (370-443)||(52957743-52957816)
chr1 (367-451)||(1394887-1394971)
chr1 (167-215)||(41116831-41116879)
chr1 (316-451)||(11237600-11237735)
chr1 (257-399)||(21965683-21965826)
chr1 (71-128)||(11237814-11237871)
chr1 (254-314)||(43021315-43021375)
chr1 (53-171)||(30280292-30280420)
chr1 (53-132)||(52957508-52957587)
chr1 (281-389)||(1453955-1454064)
chr1 (167-207)||(41116789-41116829)
chr1 (316-347)||(23697527-23697558)
chr1 (377-412)||(23699827-23699862)
chr1 (162-192)||(1394517-1394547)
chr1 (56-134)||(4395774-4395852)
chr1 (203-243)||(6295412-6295452)
[»] chr5 (40 HSPs)
chr5 (53-441)||(12436151-12436543)
chr5 (4-347)||(42673580-42673935)
chr5 (63-328)||(18412897-18413167)
chr5 (1-451)||(8544134-8544596)
chr5 (162-451)||(19804079-19804375)
chr5 (162-451)||(1583832-1584128)
chr5 (10-229)||(17201641-17201870)
chr5 (1-243)||(39585469-39585719)
chr5 (264-451)||(17201883-17202071)
chr5 (162-420)||(11991716-11991977)
chr5 (186-451)||(6428435-6428700)
chr5 (284-451)||(28620495-28620660)
chr5 (258-451)||(32474594-32474787)
chr5 (280-451)||(1584147-1584315)
chr5 (11-240)||(28620289-28620517)
chr5 (359-451)||(39585358-39585451)
chr5 (4-134)||(17201468-17201597)
chr5 (264-410)||(39940167-39940313)
chr5 (254-433)||(25612737-25612915)
chr5 (294-451)||(248901-249057)
chr5 (53-134)||(36437075-36437155)
chr5 (53-219)||(249155-249331)
chr5 (291-451)||(37270031-37270191)
chr5 (316-451)||(36059557-36059692)
chr5 (316-451)||(20202164-20202300)
chr5 (284-451)||(11825184-11825354)
chr5 (268-443)||(13219817-13219996)
chr5 (173-243)||(19133254-19133323)
chr5 (162-236)||(20202006-20202080)
chr5 (80-132)||(17200377-17200429)
chr5 (280-391)||(14967816-14967928)
chr5 (270-345)||(17200502-17200577)
chr5 (127-165)||(17201602-17201640)
chr5 (257-298)||(32474523-32474564)
chr5 (355-411)||(36244539-36244596)
chr5 (367-451)||(17558349-17558433)
chr5 (367-451)||(32717609-32717692)
chr5 (316-451)||(16366046-16366182)
chr5 (194-240)||(14655194-14655240)
chr5 (184-240)||(36059763-36059819)
[»] chr6 (26 HSPs)
chr6 (4-451)||(25056731-25057179)
chr6 (53-408)||(2437273-2437639)
chr6 (53-339)||(8049457-8049757)
chr6 (258-443)||(14093223-14093409)
chr6 (76-243)||(9353388-9353556)
chr6 (265-449)||(8049786-8049973)
chr6 (55-209)||(14093414-14093572)
chr6 (255-411)||(23410950-23411107)
chr6 (291-451)||(26252014-26252174)
chr6 (162-240)||(4666180-4666258)
chr6 (316-425)||(21526951-21527061)
chr6 (316-443)||(7972271-7972399)
chr6 (257-399)||(31660870-31661013)
chr6 (367-451)||(6026570-6026654)
chr6 (56-116)||(13871698-13871757)
chr6 (53-150)||(26252287-26252390)
chr6 (162-240)||(4184970-4185048)
chr6 (280-414)||(6110665-6110800)
chr6 (261-314)||(14093024-14093077)
chr6 (367-448)||(8461228-8461309)
chr6 (162-242)||(23410853-23410931)
chr6 (288-335)||(4123128-4123175)
chr6 (355-444)||(34131988-34132077)
chr6 (167-239)||(6110824-6110895)
chr6 (186-218)||(13871650-13871682)
chr6 (291-335)||(31656042-31656086)
[»] chr8 (31 HSPs)
chr8 (63-451)||(32233907-32234304)
chr8 (4-451)||(5871007-5871456)
chr8 (71-414)||(34146503-34146849)
chr8 (162-451)||(38401866-38402150)
chr8 (164-451)||(27232000-27232289)
chr8 (173-434)||(14896909-14897172)
chr8 (268-447)||(7694903-7695083)
chr8 (81-243)||(29315478-29315649)
chr8 (53-243)||(36682822-36683021)
chr8 (162-400)||(11087484-11087728)
chr8 (294-451)||(29315241-29315399)
chr8 (162-321)||(38457646-38457807)
chr8 (283-451)||(1530208-1530377)
chr8 (316-451)||(1256241-1256377)
chr8 (162-298)||(1530394-1530528)
chr8 (291-414)||(3742189-3742313)
chr8 (202-414)||(34039248-34039458)
chr8 (173-239)||(16599066-16599132)
chr8 (257-343)||(30887514-30887600)
chr8 (316-443)||(3443332-3443461)
chr8 (370-443)||(36683451-36683524)
chr8 (367-443)||(35970090-35970166)
chr8 (53-132)||(3741934-3742013)
chr8 (162-235)||(35970369-35970440)
chr8 (258-328)||(35970468-35970538)
chr8 (55-132)||(34039174-34039251)
chr8 (359-451)||(38459086-38459175)
chr8 (194-240)||(7578009-7578055)
chr8 (74-107)||(1256445-1256478)
chr8 (1-41)||(7695086-7695126)
chr8 (1-45)||(30887670-30887714)
[»] scaffold1327 (1 HSPs)
scaffold1327 (162-451)||(1098-1389)
[»] scaffold1986 (2 HSPs)
scaffold1986 (254-446)||(561-756)
scaffold1986 (169-207)||(489-527)
[»] scaffold0005 (3 HSPs)
scaffold0005 (255-436)||(257205-257386)
scaffold0005 (53-168)||(257021-257149)
scaffold0005 (162-230)||(272049-272117)
[»] scaffold0188 (1 HSPs)
scaffold0188 (257-434)||(5619-5798)
[»] scaffold0841 (3 HSPs)
scaffold0841 (255-399)||(4205-4350)
scaffold0841 (264-448)||(3838-4024)
scaffold0841 (80-132)||(4412-4462)
[»] scaffold0637 (1 HSPs)
scaffold0637 (257-346)||(3773-3862)
[»] scaffold0475 (1 HSPs)
scaffold0475 (162-216)||(11180-11234)
[»] scaffold0018 (1 HSPs)
scaffold0018 (370-413)||(184596-184639)


Alignment Details
Target: chr4 (Bit Score: 344; Significance: 0; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 500
Target Start/End: Complemental strand, 54982612 - 54982114
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54982612 ttgagagaagaaaaataaaagactctatgaatgtttaaaaggaagaaaaaa-tggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 54982514  T
Q  101 ttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtg 200  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54982513 ctgaagactcatttgacaatatacaagaacaagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtg 54982414  T
Q  201 cacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  54982413 cacaatatttagaaaattaacaattgtttggtatgagagagagcgtaaaaaaataggaatttgttggagaaaaagataataactgataattgtttgttac 54982314  T
Q  301 gagagaaatataacttattaaatttattggaaagataaagtgtgtgc-nnnnnnntagaaatttattgtggattaaaatgagggtataataggaagaaaa 399  Q
    | ||||||||||||||||| ||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||| ||||||| |||||||    
T  54982313 gtgagaaatataacttattgaatttattggaaagataaagtatgtgcaaaaaaaatagaaatttattgtggattaaaatgagggcataatagaaagaaaa 54982214  T
Q  400 cgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacacttnnnnnnncaatggagggagtaacaaattatacttatctttttcatttt 499  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  54982213 cgtgcaaaaatacacatcactattttgatgttaattttctaaaaagacacttaaaaaat-aatggagggagtaacaaattatacttatctttttcatttt 54982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 49263221 - 49263684
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| |||||||||||||||| ||||||||| ||| | ||        |||||||||||||||| |||||||||||||||||||||||||||||||    
T  49263221 ttgagagaagaaaaataaaagactccatgaatgttcaaatggaa-aaaaaagtggaagactcgttggaattgctgatgagaggtgaagagggagcaatag 49263319  T
Q  101 ttgaagactcatttgacaagatacaagaacaaga------tgacaatgaagaagaaa---tttcatcaatataatttttatattgacttaaaataattaa 191  Q
    ||||||||||||||||||||| ||||||||||||      ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  49263320 ttgaagactcatttgacaagaaacaagaacaagaacaagatgacaatgaagaagaagaagtttcatcaatataatttttatattgacttaaaataattaa 49263419  T
Q  192 aaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga--gcgtnnnnnnntaggaatttattggagaaaaagataataactgacaa 289  Q
    ||||||| |   ||||||||||||||| |||||| |||| |||||||||||  ||||       ||| | ||| |||||||||||||||||| || ||||    
T  49263420 aaagatgcgtgtaatatttagaaaattgacaattatttgctatgagagagagcgcgtacaaaaatagaattttgttggagaaaaagataatagctaacaa 49263519  T
Q  290 t--tgtttgttacgagagaaatataacttattaaatttattggaaagataaa--gtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggt 384  Q
    |  | |||||||||||||||| |||||  |||||||||||||||||||||||  ||||| |         || |||||||| |||||||||||| |||||    
T  49263520 ttatatttgttacgagagaaaaataac--attaaatttattggaaagataaaatgtgtgagaaaaaaaaaaggaatttattagtggattaaaatcagggt 49263617  T
Q  385 ataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     |||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  49263618 ctaataggaagaaaatgtgcaaaaatacacttcgctattttggtgttaattttctaaaaagacactt 49263684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 53 - 327
Target Start/End: Complemental strand, 9089423 - 9089141
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaa---ga 149  Q
    |||| ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  9089423 tggaggactcgttgaaattgctgatgagaggtgaagaggaagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagacga 9089324  T
Q  150 aatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaata-tttagaaaattaacaattgtttggtatgagagagag--cgt 246  Q
    | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||| |||||| ||| ||||||| ||||||||||||  |||    
T  9089323 agtttcatcaatataatttttatattgacttaagataattaaaaatatgtgcccaatattttaaaaaattgacagttgtttgttatgagagagagaacgt 9089224  T
Q  247 --nnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttat 327  Q
             ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||    
T  9089223 gcaaaaaagtaggaatttgttggagaaaaagataataaccgacaattatttgttacgagagaactataacatattaaatttat 9089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 165 - 451
Target Start/End: Complemental strand, 49299617 - 49299326
Alignment:
Q  165 atttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnnta---ggaatt 261  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||        |   ||||||    
T  49299617 atttttatattgacttaaaataattaaaaagatgtgcacattatttagaaaattaacaattgtttgttatgtgagagagagtgcaaaaaaaaaaggaatt 49299518  T
Q  262 tattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaat 361  Q
    | || || |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| |||||||| ||||       ||| |||    
T  49299517 tgttagataaaaagataataactgacaattgtttgttacgagtgaaagataacatattaaatttattggaaaaataaagtgagtgcaaaaaaatagtaat 49299418  T
Q  362 ttattg-tggattaaaatgagggtataa-taggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||| ||||||||||||||||||||| | |||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  49299417 ttattgatggattaaaatgagggtataattgggaaaaaaaagtgcaaaaatacacatcgctatttttgtgttaattttctaaaaagacactt 49299326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 50721131 - 50721375
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| ||||||||||||||||  |||||||| ||||  |||       |||||||||||||| | |||||||||||| ||||||||| ||||||||    
T  50721131 ttgagagaagaaaaataaaagactccgtgaatgttcaaaaagaagaaaaag-tggaagactcgttgaaattgctgatgagacgtgaagaggaagcaatag 50721229  T
Q  101 ttgaagactcatttgacaagatacaagaacaagatgacaat------gaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  50721230 ttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaagaagaagttttatcaatatattttttatattgacttaaaataattaaaaa 50721329  T
Q  195 gatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||| |||||||| | |||||| |||||| |||| |||||||||    
T  50721330 gatgtgtacaatattaaaaaaattgacaattatttgttatgagaga 50721375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 24073995 - 24073751
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| |||||||||||||||| ||||||||| ||||| |||       |||||||||||||||| | ||||||||||||||||||||| |||||||    
T  24073995 ttgagagaagaaaaataaaagactccatgaatgttcaaaaggaagtaaaaa-tggaagactcgttggaatagctgatgagaggtgaagagggtgcaatag 24073897  T
Q  101 ttgaagactcatttgacaagatacaagaacaagat------gacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaa 194  Q
    || ||||||||||||||||||||||||||||||||      ||||| ||||||||| ||||||||| | |||||| |||||||||||||||||||||||     
T  24073896 ttaaagactcatttgacaagatacaagaacaagatcaagatgacaacgaagaagaagtttcatcaaaaaaatttt-atattgacttaaaataattaaaa- 24073799  T
Q  195 gatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga 242  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| |||||    
T  24073798 gatgtgcaaaatatttagaaaattgacaattgtttgttatgaaagaga 24073751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 162 - 451
Target Start/End: Complemental strand, 1821357 - 1821077
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatt 261  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||| |||        ||||||||    
T  1821357 ataatttttatattgacttacaataattaaaatgatgtgcacaatatttataaaattgacaattgtttgttatgagagagggcg-caaaaaataggaatt 1821259  T
Q  262 tattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaat 361  Q
    | |||||||||||||||||||       ||| ||||||   |||||| ||||| |||||||||||||||||||||||||||||||        ||  |||    
T  1821258 tgttggagaaaaagataataa-------ttggttgttaaaggagaaacataacatattaaatttattggaaagataaagtgtgtg-----aaatacgaat 1821171  T
Q  362 ttattg----tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  1821170 ttattggtggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctattttggtgttaattttttaaaaagacactt 1821077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 99 - 444
Target Start/End: Original strand, 53393631 - 53393979
Alignment:
Q  99 agttgaagactcatttgacaagatacaagaacaagatgacaatgaa---gaagaaatttcatcaatataatttttatattgacttaaaataattaaaaag 195  Q
    ||||||||||| ||| || ||||||||||||||||| |||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53393631 agttgaagacttatt-gaaaagatacaagaacaagaagacaatgaaaaagaagaagtttcatcaatataatttttatattgacttaaaataattaaaaag 53393729  T
Q  196 atgtgcacaatatttagaaaattaacaattgtttggtatgagagagagc-gtnnnnnnntaggaatttattggagaaaaagataataactgacaattgtt 294  Q
    ||||||||||  ||||||| ||| | ||||||||| || ||||||| ||           | |||||| |||||| ||||||||||||||||||||||||    
T  53393730 atgtgcacaaagtttagaatattgataattgtttgttacgagagagtgcacaaaaaaaaaatgaatttgttggag-aaaagataataactgacaattgtt 53393828  T
Q  295 tgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt-attgtggattaaaatgagggtataatagga 393  Q
    | |||| ||| ||||||||| ||||||| |||||| | |||||||||||||||       ||| ||||| |  |||||||||||| || ||| |||| ||    
T  53393829 tattacaagaaaaatataacatattaaaattattgaatagataaagtgtgtgcaaaataataggaatttaaaggtggattaaaataagagtagaatatga 53393928  T
Q  394 agaaaacgtgcaaaaatacacatcgct-gttttgatgttaattttctaaaaa 444  Q
    |||||| |||||||||||||| ||||| |||||| |||||||||||||||||    
T  53393929 agaaaatgtgcaaaaatacacctcgctagttttg-tgttaattttctaaaaa 53393979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 162 - 451
Target Start/End: Complemental strand, 19443334 - 19443052
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagag----agagcgtnnnnnnntagg 257  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||    ||||||         | |    
T  19443334 ataatttttatattgacttacaataattaaaaagatgtgctcaatatttagaaaattgacaattgtttgttatgagagagagagagcgcaaaaaaagaag 19443235  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| |||||||||||||||||       ||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||||         |||    
T  19443234 aatttgttggagaaaaagataat-------aattgtttgttacgaaagaaacataacatattaaatttattggaaagataaaatgtgt-----taaatag 19443147  T
Q  358 aaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| | | ||| | ||||||||||||||||||||||    
T  19443146 aaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatatacatcgttatcttggtattaattttctaaaaagacactt 19443052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 162 - 451
Target Start/End: Complemental strand, 38840195 - 38839903
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga----gcgtnnnnnnntagg 257  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||  |||||||||||    |||        ||||    
T  38840195 ataatttttatattgacttaaaataatcaaaaagatgttcacaatatttaggaaattgacaattgtttcttatgagagagaaagtgcgcaaaaaaatagg 38840096  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| || |||||||||||||||||||||| ||||||||||| ||| ||| ||||  ||||||||||||||||||||||| ||||||||       |||    
T  38840095 aatttgtttgagaaaaagataataactgacatttgtttgttacaagaaaaagataatatattaaatttattggaaagataaggtgtgtgc-aaaaaatag 38839997  T
Q  358 aaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| |||||||||||| | |||||||||| ||||||| ||||||||||| |||||||||||||| |||||| ||| | |||| ||||||    
T  38839996 aaatttattggtggattaaaatta-ggtataatagaaagaaaatgtgcaaaaatatacatcgctgttttggtgttaagttttttaaaaaacactt 38839903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 257 - 443
Target Start/End: Original strand, 9808039 - 9808224
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||       ||    
T  9808039 gaatttgttggagaaaaagataataactgataattgtttgttacgagagaaagataacatattaaatttattagaaagataaagtgtgtgc-aaaaaata 9808137  T
Q  357 gaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    | |||||||| |||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  9808138 ggaatttattagtggattaaaatgaggatataataggaagaaaatgtg-aaaaatacacatcgctattttggtgttaattttctaaaa 9808224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 2493427 - 2493570
Alignment:
Q  102 tgaagactcatttgacaagatacaagaacaagatgacaatgaaga---agaaatttcatcaatataatttttatattgactt-aaaataattaaaaagat 197  Q
    |||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  2493427 tgaagactcatttgacaaaatacaagaacaagatgacaatgaagatgaagaaatttcatcaatataatttttatattggctttaaaataattaaaaagat 2493526  T
Q  198 gtgcacaatatttagaaaattaacaattgtttggtatgagagag 241  Q
    ||||| |||||||| |||||| ||||||||||| ||||||||||    
T  2493527 gtgcataatatttaaaaaattgacaattgtttgttatgagagag 2493570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 17330845 - 17331032
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt 363  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||||        ||| |||||    
T  17330845 ttggaggaaaagataataacaaacaattgtttgtttcgagagaaaaataatatattaaatttattggaaagataaagtgtgtg-aaaaaaataggaattt 17330943  T
Q  364 attg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||| || |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  17330944 attgatgcattaaaattagggtataataggaagaaaatgtgcaaaaatacacattgctattttggtgttaattttctaaaaagacactt 17331032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 258 - 451
Target Start/End: Original strand, 45666729 - 45666921
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||  || | |||| ||||||| |||||||||||||||||       |||    
T  45666729 aatttgttggagaaaaagataacaactaacaattgtttgttacaagagagata--acatgttaattttattgaaaagataaagtgtgtgcaaaaaaatag 45666826  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||| |||||||||||||    
T  45666827 gaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctattttggtgtgaattttttaaaaagacactt 45666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 284 - 447
Target Start/End: Complemental strand, 24073507 - 24073343
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagg 382  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||       |||||||||||| ||||||||||| |||     
T  24073507 tgacaattgtttgttacgagagaaatataacatattaaatttattgaaaagataaagtgtgtgcaaagaaatagaaatttattggtggattaaaacgaga 24073408  T
Q  383 gtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagac 447  Q
    ||||| ||||||||||| |||||||||||||| | ||| ||||| |||||||||||||| |||||    
T  24073407 gtatattaggaagaaaatgtgcaaaaatacactttgctattttggtgttaattttctaagaagac 24073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 162 - 451
Target Start/End: Complemental strand, 47944245 - 47943966
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag----cgtnnnnnnntagg 257  Q
    ||||||||||||| ||||||   || |||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||    ||        ||||    
T  47944245 ataatttttatatcgacttac--tacttaaaaagatgtgcacaatatttaaaaaattgacaattgtttgttatgatagagagagcgcgcaaaaaaatagg 47944148  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||| | ||| |||||||||||||||       |||||| | |||||| ||| ||||| ||||||||||||| |||||||||||||||||        |||    
T  47944147 aatgtgttgaagaaaaagataataa-------ttgtttat-acgagataaacataacatattaaatttattagaaagataaagtgtgtg-----aaatag 47944061  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  47944060 gaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctattttggtgttaattttttaaaaagacactt 47943966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 162 - 444
Target Start/End: Complemental strand, 34031776 - 34031481
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga----------gcgtnnnnn 251  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||  |||||||||||          |||          
T  34031776 ataatttttatattgacttaaattaattaaaaagatgtgcacaatatttaaaaaattgacaattgtttattatgagagagagagagagactgcgcaaaaa 34031677  T
Q  252 nntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnn 351  Q
      ||||||||  ||||| ||||||||| || || ||||||||||||||||||| ||| ||||| | ||||||||  || |||||||||||||||||        
T  34031676 aataggaattagttggataaaaagatattatctaacaattgtttgttacgaga-aaagataacatgttaaatttcctgaaaagataaagtgtgtgcaaaa 34031578  T
Q  352 nnntaga---aatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaa 444  Q
        | |   |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| | |||||||||||||||    
T  34031577 aaaaaaattgaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcactattttggtcttaattttctaaaaa 34031481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 53 - 451
Target Start/End: Complemental strand, 38044641 - 38044252
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaaat 152  Q
    ||||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||             ||||||||||||||  |    
T  38044641 tggaagactcgttagaattgccgatgagaggtgaagatggagcaatagttgaagactcatttgacaagat-------------gacaatgaagaagaggt 38044555  T
Q  153 ttcatcaatataatttttatattgacttaaaataatta-aaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga----gcg-t 246  Q
    ||||||||||||||||||||| ||||| |||||||||| |||| ||||||| ||||||||||||||| ||||||||||  || ||||||||    |||      
T  38044554 ttcatcaatataatttttatactgactgaaaataattaaaaaaaatgtgcataatatttagaaaattgacaattgtttattacgagagagataatgcgca 38044455  T
Q  247 nnnnnnntaggaatttattggagaaaaag---ataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgt 343  Q
           || |||||| ||||||||||||   ||| ||||| | || |||||||||||||||||||||||| |||||||||      |||   || ||||    
T  38044454 aaaaaaataagaatttgttggagaaaaagttaatactaactcataagtgtttgttacgagagaaatataacatattaaatt------aaa---aaggtgt 38044364  T
Q  344 gtgc---nnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttct 439  Q
    ||||          |||||||||||| || |||||||||||  ||| |||| |||||||| |||||||||||||||| ||| |||| ||||||||||| |    
T  38044363 gtgcaaaaaaaaaatagaaatttattggttgattaaaatgaaagtacaataagaagaaaatgtgcaaaaatacacattgctatttttatgttaatttttt 38044264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 162 - 346
Target Start/End: Original strand, 25494118 - 25494306
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggta----tgagagagagc--gtnnnnnnnta 255  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||     ||||||||||  |        ||    
T  25494118 ataatttttatattgacttaaaataattaaaaagatgtgcacgatatttagaaaattgacaattgtttgttaagagggagagagagcgagcaaaaaaata 25494217  T
Q  256 ggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg 346  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||  || |||||  ||||||||||||| ||| ||||||||||||    
T  25494218 ggaatttgttggagaaaaagataataaatgacaattgtttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 25494306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 278 - 443
Target Start/End: Original strand, 50721376 - 50721541
Alignment:
Q  278 aataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaa 376  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||       || ||||||||| || |||| ||    
T  50721376 aataactaacaattgtttgttacgagagaaagataacatattaaatttagtggaaagataaagtgtgtgc-aaaaactaaaaatttattggtagattgaa 50721474  T
Q  377 atgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    || |||||||||||||||||||| || |||||||| |||| ||| ||||| |||||||||| |||||    
T  50721475 ataagggtataataggaagaaaatgtacaaaaatatacattgctattttggtgttaattttttaaaa 50721541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 257 - 451
Target Start/End: Original strand, 6949450 - 6949631
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| |||||||||||||| ||||| ||||||||||||||| ||  |||| ||||| |||||||||||||||||||||||||||||                
T  6949450 gaatttgttggagaaaaagattataaccgacaattgtttgttatgaacgaaagataacatattaaatttattggaaagataaagtgtg------------ 6949537  T
Q  357 gaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
      |||||||| ||||||||||  ||| ||||||||||||||||| || ||||||||||||||| |  |||| ||||||||||||||||| ||||||    
T  6949538 --aatttattggtggattaaagagagtgtataataggaagaaaatgtacaaaaatacacatcgttaatttggtgttaattttctaaaaatacactt 6949631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 276 - 451
Target Start/End: Complemental strand, 37209724 - 37209550
Alignment:
Q  276 ataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgt-ggatta 374  Q
    ||||||| ||||||||||||||| ||||| || ||  || |||||||||||||| |||||||||||||||||       ||  |||||||||  ||||||    
T  37209724 ataataattgacaattgtttgttccgagaaaagta--acatattaaatttattgaaaagataaagtgtgtgcaaaagaataagaatttattggcggatta 37209627  T
Q  375 aaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||| || |||| |||||||||||| || ||||||||||||||||| ||||| || |||||||||||||||||||||    
T  37209626 aaataagagtatgataggaagaaaatgtacaaaaatacacatcgctattttggtggtaattttctaaaaagacactt 37209550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 451
Target Start/End: Complemental strand, 46430542 - 46430407
Alignment:
Q  317 attaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacaca 415  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||| || ||||||||||||||  | ||||||||||||    
T  46430542 attaaatttattggaaagataaagtgtgtgctaaaaaatagaaatttattggtagattaaaatgagagtgtaataggaagaaaatattcaaaaatacaca 46430443  T
Q  416 tcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||| | ||||| |||||||||| |||||||||||||    
T  46430442 tcgttattttggtgttaattttttaaaaagacactt 46430407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 451
Target Start/End: Complemental strand, 9088835 - 9088751
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||  ||||||| ||||||||||| ||||    
T  9088835 gtggattaaaatgagggtataataggaagaaaatgtgcaagaatacacatcgctattttagtgttaatgttctaaaaagatactt 9088751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 414
Target Start/End: Original strand, 41503030 - 41503139
Alignment:
Q  306 aaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgc 404  Q
    ||||||||| ||||||||||||| ||||||||||||||||||       || |||| ||||| ||||||||| |||||||||||||||||||||| ||||    
T  41503030 aaatataacatattaaatttattagaaagataaagtgtgtgccaaaatatataaatatattggtggattaaattgagggtataataggaagaaaatgtgc 41503129  T
Q  405 aaaaatacac 414  Q
    ||||||||||    
T  41503130 aaaaatacac 41503139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 41502866 - 41502942
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgaga 238  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||| ||||||| ||||||||||| |||||||    
T  41502866 ataatttttatattgacttaaattaattaaagagttgtgcacaatatttcgaaaattgacaattgtttgttatgaga 41502942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 33889909 - 33889991
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcac---aatatttagaaaattaacaattgtttggtatgagagag 241  Q
    |||||||||||||||||||||| |||||||| ||||||||||   |||||||| |||||| ||||||||||| ||||||||||    
T  33889909 ataatttttatattgacttaaattaattaaagagatgtgcacaataatatttaaaaaattgacaattgtttgttatgagagag 33889991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 25494305 - 25494374
Alignment:
Q  378 tgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagac 447  Q
    ||||||||||||||||||| || |||||||||| |||||||||  |||| ||||||||||||||||||||    
T  25494305 tgagggtataataggaagacaatgtgcaaaaatgcacatcgctaatttggtgttaattttctaaaaagac 25494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 382 - 451
Target Start/End: Original strand, 46196526 - 46196595
Alignment:
Q  382 ggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||| |||||||||| |||||||||||||    
T  46196526 ggtataataggaagaaaatatgcaaaaatacacctcgctattttggtgttaattttataaaaagacactt 46196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 38433982 - 38433847
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacaca 415  Q
    ||||||||||||||||||||||||||||||||         ||||||  | |||||||||||||||||||||||||||| |||   |||||||||| ||     
T  38433982 tattaaatttattggaaagataaagtgtgtgcaaaaaataggaaattattagtggattaaaatgagggtataataggaaaaaagtttgcaaaaatatact 38433883  T
Q  416 tcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||| ||||  ||||||  || ||||| |||||||    
T  38433882 tcgctatttttgtgttaaaattttaaaacgacactt 38433847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 45635211 - 45635133
Alignment:
Q  160 atataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgaga 238  Q
    |||||||||| || | ||||| ||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||    
T  45635211 atataattttgatctagacttgaaataattaaagagatatgcacaatatttagaaaatttaaaattgtttgttatgaga 45635133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 55344062 - 55344199
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataata-ggaagaaaacgtgcaaaaataca 413  Q
    ||||||||||||| || |||||||||||||||       ||| || ||||| |||||||||||||||||||||||| | || |||| |||||||||||||    
T  55344062 tattaaatttattagacagataaagtgtgtgcaaaaatataggaaattattagtggattaaaatgagggtataatatgaaaaaaaatgtgcaaaaataca 55344161  T
Q  414 catcgctgttttgatgttaattttctaaaaagacactt 451  Q
      ||||| ||||  ||||||  |||||||| |||||||    
T  55344162 tttcgctatttttgtgttaaaattctaaaacgacactt 55344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 45666638 - 45666681
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaa 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  45666638 ataatttttatattgacttaaaataattaaaaagatatgcacaa 45666681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 414
Target Start/End: Complemental strand, 53370234 - 53370095
Alignment:
Q  274 agataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggat 372  Q
    ||||| ||||| |||| ||||| |||||||||||||||||| |||||||||||||| ||||| ||| | |||||       ||  ||| |||| || |||    
T  53370234 agatagtaactaacaaatgtttattacgagagaaatataacatattaaatttattgaaaagagaaaatttgtgc--aaatttatgaatatattggttgat 53370137  T
Q  373 taaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    || ||||| ||||||||||||| |||| ||||||||||||||    
T  53370136 tagaatgatggtataataggaataaaaggtgcaaaaatacac 53370095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 30912827 - 30912883
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataac 314  Q
    ||||| ||||||||||||||| ||||| |||| |||||||||||||||||| |||||    
T  30912827 aatttgttggagaaaaagatagtaactaacaaatgtttgttacgagagaaaaataac 30912883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 414
Target Start/End: Original strand, 33890060 - 33890182
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataat 389  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||| |||||           |||| || |||| |||||||||| ||||||||||||    
T  33890060 tgtttgttacgagaaaaatataac--attaaatttattggaaagatagagtgtaataaaaaaaatagagatatattggtggattaaattgagggtataat 33890157  T
Q  390 aggaagaaaacgtgcaaaaatacac 414  Q
    ||||||||||  || ||||||||||    
T  33890158 aggaagaaaatatgtaaaaatacac 33890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 20782861 - 20782952
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg 346  Q
    ||||||||||||||||||  |||| ||||  | | |||||||||  |||||| ||||||| |||||||||||||| ||||| ||| ||||||    
T  20782861 aggaatttattggagaaatggatattaacaaaaatttgtttgttttgagagacatataacatattaaatttattgaaaagagaaaatgtgtg 20782952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 31104893 - 31104810
Alignment:
Q  317 attaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaa 399  Q
    ||||||||||||| ||||  |||||||||||       ||||||||||||  | ||||||||||||||||||||||||||||||    
T  31104893 attaaatttattgaaaagtgaaagtgtgtgcaaaaagttagaaatttattccttgattaaaatgagggtataataggaagaaaa 31104810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 33809360 - 33809398
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacga 302  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  33809360 ttggagaaaaagataataactaacaattgtttgttacga 33809398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 22349374 - 22349450
Alignment:
Q  269 gaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg 346  Q
    |||| ||||| ||||| |||||||||| |||||||||||| ||||| |||| ||||||||| ||||| ||| ||||||    
T  22349374 gaaatagatagtaactaacaattgttt-ttacgagagaaagataacatatttaatttattgaaaagagaaaatgtgtg 22349450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 24538044 - 24537910
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaa-cgtgcaaaaataca 413  Q
    |||||||||||||||||||||||||||||||        ||| || ||||| ||||||| ||||||  |||||||||||| ||||  |||||||||||||    
T  24538044 tattaaatttattggaaagataaagtgtgtg-aaaaaaataggaaattattagtggatt-aaatga-agtataataggaaaaaaagtgtgcaaaaataca 24537948  T
Q  414 catcgctgttttgatgttaattttctaaaaagacactt 451  Q
    | ||||| |||| |||||||  |||||||| |||||||    
T  24537947 cttcgctatttttatgttaaaattctaaaacgacactt 24537910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 2685141 - 2685198
Alignment:
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||||| ||| ||||||||| | ||||||| |||||||| ||||||||||||||    
T  2685141 aaatttattggtggtttaaaatgaagatataataagaagaaaatgtgcaaaaatacac 2685198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 5741365 - 5741398
Alignment:
Q  96 aatagttgaagactcatttgacaagatacaagaa 129  Q
    |||||||||||| |||||||||||||||||||||    
T  5741365 aatagttgaagattcatttgacaagatacaagaa 5741398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 4567541 - 4567995
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    ||||||||  |||||||||| |||| ||||||||| ||||| |||       |||||||||||||||| |||||||||||||||||||||||||||||||    
T  4567541 ttgagagaataaaaataaaatactccatgaatgttcaaaaggaagaaaatg-tggaagactcgttggaattgctgatgagaggtgaagagggagcaatag 4567639  T
Q  101 ttgaagactcatttgacaagataca------agaacaagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaa 194  Q
    ||||||||||| ||||||| |||||      ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  4567640 ttgaagactcaattgacaaaatacatgaacaagaacaagatgacaatgaagaagaagtttcatcaatataatttttatattgactgaaaataattaaaaa 4567739  T
Q  195 gatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgt--nnnnnnntaggaatttattggagaaaaagataataactgacaattg 292  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||         ||| |||||   | ||||||||||||||| |||||||||    
T  4567740 gatgtgcacaatatttagaaaattaacaattgtttgttatgagagagagtgtgcaagaaaatagaaatttgccgaagaaaaagataataattgacaattg 4567839  T
Q  293 tttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataatagg 392  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||        |||| ||  | |||||||||||||||||||||||||     
T  4567840 tttgttatgagagaaatataacatattaaatttattggaaagataaagtgtgtgcaaaaaataagaatttagtggtggattaaaatgagggtataataga 4567939  T
Q  393 aagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagaca 448  Q
    |||| |||||| ||||||||||  |||| |||||||||||||||||||||||||||    
T  4567940 aagataacgtgtaaaaatacactgcgctattttgatgttaattttctaaaaagaca 4567995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 16197013 - 16197466
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagagg-tgaagagggagcaata 99  Q
    |||||||| |||||||||||||||| |||||| || ||||| ||        || || |||||||||| ||| ||||||| || |||||||||| |||||    
T  16197013 ttgagagaagaaaaataaaagactccatgaatattcaaaaggaataaatagttg-aatactcgttggaattgttgatgagggggtgaagagggaacaata 16197111  T
Q  100 gttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaaa---tttcatcaatataatttttatattgacttaaaataattaaaaaga 196  Q
    | ||||||||||||| | |||||||||||||||||||||||||||||||||    |||||| |||||||| || ||||| ||||||||||||||||||||    
T  16197112 gctgaagactcatttcataagatacaagaacaagatgacaatgaagaagaagaagtttcataaatataatcttgatattaacttaaaataattaaaaaga 16197211  T
Q  197 tgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttg 296  Q
     |||||||||||||| |||||| ||||||||||| |||||||||| | |        ||||||||| ||||| |||||||||||||||||||||||||||    
T  16197212 cgtgcacaatatttaaaaaattgacaattgtttgttatgagagagtgtgcaaaaaaataggaatttgttggaaaaaaagataataactgacaattgtttg 16197311  T
Q  297 ttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaag 395  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||| | |||       ||| ||||||||| |||||||||||||||||||||||| |||    
T  16197312 ttacaagagaaagataacatattaaatttattggaaagataaagtttatgc-aaaaaataggaatttattgatggattaaaatgagggtataatagaaag 16197410  T
Q  396 aaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  16197411 aaaatgtgcaaaaatacacatcactattttggtgttaattttctaaaaagacactt 16197466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 53 - 448
Target Start/End: Complemental strand, 10534839 - 10534432
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatg--acaatgaagaagaa 150  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||   || | |||||||||    
T  10534839 tggaagactcgttggaattgctgatgagaagtgaagagggagcaatagttaaatactcatttgaccagatacaagaacaagatacaacgaagaagaagaa 10534740  T
Q  151 atttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga-------- 242  Q
     ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||||| |||||| ||||||||||| |||||||||||            
T  10534739 gtttcatcaacataatttttatattgacttacaataattaaaaagatttgcacaaaatttaaaaaattgacaattgtttgttatgagagagagagagaga 10534640  T
Q  243 --gcgtnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaag 340  Q
      |||         |||||||| |||||||||||||||||||| |||||||||||||||||| | ||| ||||| |||||||||||||  ||| |||||     
T  10534639 gcgcgcaaaaaaacaggaatttgttggagaaaaagataataacagacaattgtttgttacgacataaagataacatattaaatttattaaaaaaataaaa 10534540  T
Q  341 tgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttct 439  Q
    |||||||       ||| |||||||| |||||||||||||| |||||||||  || |||| |||||||||||||||||| | ||||| ||||||||||||    
T  10534539 tgtgtgcaaaaaaataggaatttattggtggattaaaatgaaggtataata-aaaaaaaaagtgcaaaaatacacatcgttattttggtgttaattttct 10534441  T
Q  440 aaaaagaca 448  Q
    |||||||||    
T  10534440 aaaaagaca 10534432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 84 - 444
Target Start/End: Complemental strand, 35792897 - 35792519
Alignment:
Q  84 tgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------------tgacaatgaagaagaaatttcatcaatataattttta 171  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||            | |||||||||||||| |||||||||||| |||||||    
T  35792897 tgaagagggagcaatagttgaa-actcatttgacaagatacacgaacaagaacaagaataagatcacaatgaagaagaagtttcatcaatatcattttta 35792799  T
Q  172 tattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcg-------tnnnnnnntaggaatttat 264  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||                |||| ||| |    
T  35792798 tattgacttaaaataattaaaaagatgtgcataatatctagaaaattgacaattgtttgttatgagagagagcgcgcacaaaaaaaaaaaaggatttttt 35792699  T
Q  265 tggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattta 364  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||          ||| ||||||    
T  35792698 tggagaaaaagataataagttacaattgtttgttacgagagaaagataacatattaaatttattagaaagataaagtgtgaaataaaaaataggaattta 35792599  T
Q  365 tt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaa 444  Q
    || ||||| | |||||||||||||||||||| ||||  ||||||||||||||||||| ||||  |||||||||||||||||    
T  35792598 ttggtggagt-aaatgagggtataataggaaaaaaatatgcaaaaatacacatcgctatttttgtgttaattttctaaaaa 35792519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 162 - 451
Target Start/End: Complemental strand, 2271623 - 2271344
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatt 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||  | |         |||||||    
T  2271623 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattgacaattgtttgttatgagtgacggag---------aggaatt 2271533  T
Q  262 tattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaat 361  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||        ||  |||    
T  2271532 tgttggagaaagagataataactgacaattgtttgttacgagagaaa-ataacatattaaa-ttattggaaagataaagggtgtggaaaacaataagaat 2271435  T
Q  362 tta-ttgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||| | || ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  2271434 ttagtggtagattaaaatgaggatataataggaagaaaatgtgcaaaaatacacatcgctattttggtgttaatttcctaaaaagacactt 2271344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 27723614 - 27723894
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga--gcgtnnnnnnntaggaa 259  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||       ||||||    
T  27723614 ataatttttatattgacttacaataattaaaaagatgtgcacaatatttagaaaattgacaattgtttgttatgagagagagtgcgtaaaagcataggaa 27723713  T
Q  260 tttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaa 359  Q
    ||| ||||||||||||| |||       |||||||||||||  |||||| ||||| |||||||||||||||||||||||||||||||        |||||    
T  27723714 tttgttggagaaaaagacaat-------aattgtttgttacaggagaaaaataacatattaaatttattggaaagataaagtgtgtg-----aaatagaa 27723801  T
Q  360 atttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||| |||||||||||||||||||||||||||||||||  |  ||||||| |||||||| ||||| |||||||||||||||| |||||||    
T  27723802 atttattggtggattaaaatgagggtataataggaagaaaatatttaaaaatatacatcgctattttggtgttaattttctaaaacgacactt 27723894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 258 - 449
Target Start/End: Original strand, 39618114 - 39618304
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||| ||||||| |||||||||| ||||||||||||| |||||||| |||||  ||||||||||||||||||||||| | |||||       ||     
T  39618114 aatttgttgaagaaaaatataataactggcaattgtttgttatgagagaaaaataac--attaaatttattggaaagataaaatatgtgcaaaaaaataa 39618211  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacac 449  Q
     ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  | |||| |||||||||||||||||||||||    
T  39618212 gaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacatctatatttttatgttaattttctaaaaagacac 39618304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 268 - 451
Target Start/End: Complemental strand, 3835440 - 3835256
Alignment:
Q  268 agaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt- 366  Q
    ||||||| ||||||||||| | ||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||       ||| ||||||||     
T  3835440 agaaaaaaataataactgaaatttgtttgttacaagagaaagataacatattaaatttattggaaagataaagtgtgtgcaaaaaaataggaatttattc 3835341  T
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||||||| ||||||| | |||| ||||||    
T  3835340 gtggattaaaatgaggatataataggaagaaatcatggaaaaatacacatcgctattttgatggtaatttttttaaaaaacactt 3835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 451
Target Start/End: Original strand, 37124627 - 37124794
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgaggg 383  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||         ||| ||  |||| ||||||||| ||||    
T  37124627 tgacaattgtttgttatgagagaaagataacatattaaatttattggaaagataaagtgtgtgcaaaaaaaatgaatttatttgttgattaaaatcaggg 37124726  T
Q  384 tataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||| ||||||||| |||||| ||| |||||||| |||||||||||||||||||||    
T  37124727 tataataggaagaaaatgtgcaaaaacacacattgctattttgatgctaattttctaaaaagacactt 37124794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 254 - 414
Target Start/End: Original strand, 41690203 - 41690364
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||          
T  41690203 taggaatttgttggagaaaaagataataattgacaattgtttgttacgagataaatataacatattaaatttattggaaatataaagtttgtgctaaaaa 41690302  T
Q  354 ntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
     ||| |||||||| ||| ||||||||||||||||||||  ||||||| ||| ||||||||||    
T  41690303 gtaggaatttattcgtgaattaaaatgagggtataataaaaagaaaatgtgtaaaaatacac 41690364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 256 - 451
Target Start/End: Original strand, 28226735 - 28226931
Alignment:
Q  256 ggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnt 355  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| | |||||||       |    
T  28226735 ggaatttgttggagaaaaagatattaactaacaattgtttgttacgatagaaagataacatattaaatttattggaaagatataatgtgtgcaaaacaat 28226834  T
Q  356 agaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    || ||| ||||  ||||||||||| |||||||||||||||| |||  | |||||||||||||||||  |||| ||||||| ||| |||| |||||||    
T  28226835 aggaatatattattggattaaaataagggtataataggaagtaaagatacaaaaatacacatcgctaatttggtgttaatattccaaaacgacactt 28226931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 12394563 - 12394736
Alignment:
Q  178 cttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnnta---ggaatttattggagaaaa- 273  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |         |   ||||||||||||||||||     
T  12394563 cttaaaataataaaaaagatgtgcacaatatttagaaaattgacaattgtttgatatgacagagagagaatgcgaaaaattggaatttattggagaaaaa 12394662  T
Q  274 agataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
    |||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||| |||| |||||||    
T  12394663 agataataactgacaattgtttgttaagagagaaagataacatgttaaatttattggaaagctaaaatgtgtgc 12394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 57 - 240
Target Start/End: Original strand, 37124454 - 37124649
Alignment:
Q  57 agactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaac------------------aagatgac 138  Q
    |||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||                  ||||||||    
T  37124454 agactcgttgaaattgctgatgagaggtgaagatggagcaatagtggaagactcatttgacaagatacaagaacaataacatgaacaagaacaagatgac 37124553  T
Q  139 aatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgaga 238  Q
    || ||||||||||       | | | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  37124554 aacgaagaagaaaa------agtttcatttttatattgacttaaaataattaaaaagatgtgcacattatttagaaaattgacaattgtttgttatgaga 37124647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 414
Target Start/End: Original strand, 2798785 - 2798946
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| ||||||||||| ||| ||| | | |||||||||||||||| |||| ||||| ||||||||||||| |||||| |||||||||||          
T  2798785 taggaatttgttggagaaaaatatagtaattaaaaattgtttgttacgagcgaaagataacatattaaatttattagaaagagaaagtgtgtgcaaaaaa 2798884  T
Q  354 ntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
     ||||||| |||| |||||||| ||| |||||||||||||||| |||  |||||||||||||    
T  2798885 atagaaatatattggtggattagaataagggtataataggaagtaaagatgcaaaaatacac 2798946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 271 - 413
Target Start/End: Original strand, 47541883 - 47542034
Alignment:
Q  271 aaaagataataactgacaattgtttgt------tacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc---nnnnnnntagaaat 361  Q
    |||| ||||||||||||||||||||||      ||||||||||||||||| ||||||||||||||||||||||||||||| ||           ||||||    
T  47541883 aaaaaataataactgacaattgtttgttattgttacgagagaaatataacatattaaatttattggaaagataaagtgtgcgcaaaaaaaacagagaaat 47541982  T
Q  362 ttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaataca 413  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  47541983 ttattggtggattaaaatga-ggtataataggaagaaaacgtgcaaaaataca 47542034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 8614713 - 8614631
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||| ||||||||||||||||||    
T  8614713 ttggagaaaaagataataactgacaattgtttgttacgagagaaagataatatatt-aatttattagaaagataaagtgtgtgc 8614631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 12394421 - 12394502
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga 134  Q
    ||||||||||  || | ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12394421 tggaagactcaatgaagttgctgatgagagttgaagagggagaaatagttgaagactcatttgacaagatacaagaacaaga 12394502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 411
Target Start/End: Complemental strand, 2273434 - 2273282
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||| ||||| ||||||||||        ||    
T  2273434 gaatttgttgaagaaaaagataataactaacaattgtttgttacgagagaaagataac--attaaatttattgaaaagagaaagtgtgtg-aaaaaaata 2273338  T
Q  357 gaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaata 411  Q
    | ||| |||| ||  |||||||| |||||||||||||||| ||| |||||||||||    
T  2273337 ggaatatattggtacattaaaataagggtataataggaagtaaaggtgcaaaaata 2273282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 414
Target Start/End: Original strand, 43368971 - 43369126
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||||||||||| ||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||| ||||  | |||||||||       |||    
T  43368971 aatttgttggagaaaaaaataataactaacaattgcttgttacgagagaaaaataacatattaaatttattgaaaag--agagtgtgtgcaaaaaaatag 43369068  T
Q  358 aaattta-ttgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||| || |||||||||||| | ||||||||| || ||| ||| |||||||| |||||    
T  43369069 aaatatatttgtggattaaagtaagggtataacagtaagtaaaggtgcaaaattacac 43369126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 12394783 - 12394867
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||||||  | ||||| |||| |||||||||||||||||||    
T  12394783 gtggattaaaatgagagtataataggaagaaaatgtgcaaaaatgcacatcattattttggtgttcattttctaaaaagacactt 12394867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 33258950 - 33259034
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||| ||| | ||||| ||||||| |||||||| |||||||    
T  33258950 gtggattaaaatgagggtataataggaagaaaatctacaaaaatacacttcgttattttggtgttaatattctaaaacgacactt 33259034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 15643634 - 15643769
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||||||||||||||||||| |||||||       |||||| ||||| ||||||||||||||||||||||| | || |||| ||||||||||||||    
T  15643634 tattaaatttattggaaagataaaatgtgtgcaaaaaaatagaaaattattagtggattaaaatgagggtataatcgtaa-aaaatgtgcaaaaatacac 15643732  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
     |  || ||||  |||||| ||||||||| |||||||    
T  15643733 ttaactatttttgtgttaaatttctaaaacgacactt 15643769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 425
Target Start/End: Original strand, 39434429 - 39434539
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||||||||||||||||||||||||||||||||       ||| || ||||| || ||||||||| ||||||||||||||| |||  ||||||||||||||    
T  39434429 tattaaatttattggaaagataaagtgtgtgcacaaaaataggaaattattagtcgattaaaataagggtataataggaaaaaagtgtgcaaaaatacac 39434528  T
Q  415 atcgctgtttt 425  Q
     ||||| ||||    
T  39434529 ttcgctatttt 39434539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 41747107 - 41747023
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtg 342  Q
    ||||| || |||||||| ||| ||||| ||||||||||||||||||||||| ||||  |||||||||||||| ||||| ||||||    
T  41747107 aatttgttagagaaaaatatagtaactaacaattgtttgttacgagagaaagataaaatattaaatttattgaaaagagaaagtg 41747023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 4678711 - 4678789
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||| |||| ||||||||||||||||| |||| ||||||||| |||||||||| | ||||||||| || ||||||    
T  4678711 ataattttgatatagacttaaaataattaaagagatatgcacaatacttagaaaattgaaaattgtttgttacgagaga 4678789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 46671775 - 46671678
Alignment:
Q  317 attaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaa-cgtgcaaaaatac 412  Q
    ||||||||||||||||| |||||||||||||       |||||| ||||| |||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  46671775 attaaatttattggaaaaataaagtgtgtgcaaaaaaatagaaaattattagtggcttaaaatgagggtataataggaaaaaaattgtgcaaaaatac 46671678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 451
Target Start/End: Original strand, 17270042 - 17270225
Alignment:
Q  268 agaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg 367  Q
    ||||||||||| || || |||| |||||||||||||||||||||||  |||||||| ||||| || || ||||||| | |       ||| |||  ||||    
T  17270042 agaaaaagatagtatctaacaaatgtttgttacgagagaaatataatatattaaatatattgaaacgagaaagtgtatac-aaaaaataggaataaattg 17270140  T
Q  368 -tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     |||||||||||||| |||||||||| | |||| ||| ||||| |||| ||  | ||||| | |||||||||||||| |||||||    
T  17270141 atggattaaaatgagagtataatagggaaaaaatgtgtaaaaacacacttcattattttggtattaattttctaaaacgacactt 17270225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 7808894 - 7808817
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaaga 335  Q
    ||||| ||||||||| ||  | ||||| ||| |||||||||| |||||||||||||| |||||||||||||| |||||    
T  7808894 aatttgttggagaaagagggagtaactaacatttgtttgttatgagagaaatataacatattaaatttattgaaaaga 7808817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 413
Target Start/End: Complemental strand, 4962691 - 4962594
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataataggaagaaaacgtgcaaaaataca 413  Q
    ||||||||||||||||||||||||||||||||         ||||||  | || ||||||||||||||||||||||||| |||  ||| |||||||||    
T  4962691 tattaaatttattggaaagataaagtgtgtgcaaaaaataggaaattattagttgattaaaatgagggtataataggaaaaaagtgtgaaaaaataca 4962594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 420
Target Start/End: Complemental strand, 10025979 - 10025844
Alignment:
Q  286 acaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggt 384  Q
    ||||||||||||||| | ||||| ||||| |||||||||||||| ||||| ||| |||||||        |  ||| ||||| ||||||||||| |||||    
T  10025979 acaattgtttgttacaaaagaaagataacatattaaatttattgaaaagagaaattgtgtgctaaaaaacatgaatgtattgatggattaaaataagggt 10025880  T
Q  385 ataataggaagaaaacgtgcaaaaatacacatcgct 420  Q
    |||| | |||| ||| ||||||||||| || |||||    
T  10025879 ataacaagaagtaaatgtgcaaaaataaacttcgct 10025844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35792969 - 35792925
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaag 45  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||    
T  35792969 ttgagagaagaaaaataaaagactccatgaatgttcaaaagaaag 35792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 414
Target Start/End: Complemental strand, 1752140 - 1752094
Alignment:
Q  368 tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||| ||||||||||||||| ||||||| ||| ||||||||||    
T  1752140 tggattaacatgagggtataatagaaagaaaatgtgaaaaaatacac 1752094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 346
Target Start/End: Complemental strand, 24393837 - 24393807
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtg 346  Q
    |||||||||||||||||||||||||||||||    
T  24393837 tattaaatttattggaaagataaagtgtgtg 24393807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 39599558 - 39599478
Alignment:
Q  258 aatttattggagaaaaagataataac---tgacaattgtttgttacgagagaaatataacttattaaatttattggaaaga 335  Q
    ||||| ||||||||||||||| ||||   | ||||| ||||||||||| ||||| ||||  |||||||||||||| |||||    
T  39599558 aatttgttggagaaaaagatagtaacaactaacaatcgtttgttacgaaagaaaaataagatattaaatttattgaaaaga 39599478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 192
Target Start/End: Original strand, 41690133 - 41690163
Alignment:
Q  162 ataatttttatattgacttaaaataattaaa 192  Q
    |||||||||||||||||||||||||||||||    
T  41690133 ataatttttatattgacttaaaataattaaa 41690163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 4678860 - 4678889
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgt 345  Q
    ||||||||||||||||||||||||||||||    
T  4678860 tattaaatttattggaaagataaagtgtgt 4678889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 21529261 - 21529213
Alignment:
Q  280 taactgacaattgtttgttacgagagaaatataacttattaaatttatt 328  Q
    ||||| |||||||||||||| |||||||| ||||| ||||| |||||||    
T  21529261 taactaacaattgtttgttatgagagaaagataacatattagatttatt 21529213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 451
Target Start/End: Complemental strand, 16806491 - 16806040
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| |||||||||||||||   |||||||| ||||| |||       |||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  16806491 ttgagagaagaaaaataaaagacttcgtgaatgttcaaaaggaagaaaaag-tggaagactcgttggaattgttgatgagagatgaagagggagcaatag 16806393  T
Q  101 ttgaagactcatttgacaagatacaagaa------caagatgacaatgaagaagaaa---tttcatcaatataatttttatattgacttaaaataattaa 191  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  16806392 ttgaagactcatttgacaagatacaagaaaaagaacaagatgacaatgaagaagaagaagtttcatcaatataatttttatattgacttaaaataattaa 16806293  T
Q  192 aaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcg---tnnnnnnntaggaatttattggagaaaaagataataactgaca 288  Q
    | |||||| |||||||||||||||||| ||||||||||| |||||||||||| |           || |||||| || ||||||||||||||||||||||    
T  16806292 atagatgtccacaatatttagaaaattgacaattgtttgttatgagagagagagagcacaaaaaatatgaatttgttagagaaaaagataataactgaca 16806193  T
Q  289 attgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataa 388  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||          ||||   | |||||||||||| |||||||||    
T  16806192 attgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtgc----------aaatcattggtggattaaaattagggtataa 16806103  T
Q  389 taggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||    
T  16806102 taggaagaaaacgtgcaaaaatacacatcactattttggttttaattttctaaaaagacactt 16806040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 451
Target Start/End: Complemental strand, 16845772 - 16845321
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| |||||||||||||||   |||||||| ||||| |||       |||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  16845772 ttgagagaagaaaaataaaagacttcgtgaatgttcaaaaggaagaaaaag-tggaagactcgttggaattgttgatgagagatgaagagggagcaatag 16845674  T
Q  101 ttgaagactcatttgacaagatacaagaa------caagatgacaatgaagaagaaa---tttcatcaatataatttttatattgacttaaaataattaa 191  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  16845673 ttgaagactcatttgacaagatacaagaaaaagaacaagatgacaatgaagaagaagaagtttcatcaatataatttttatattgacttaaaataattaa 16845574  T
Q  192 aaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcg---tnnnnnnntaggaatttattggagaaaaagataataactgaca 288  Q
    | |||||| |||||||||||||||||| ||||||||||| |||||||||||| |           || |||||| || ||||||||||||||||||||||    
T  16845573 atagatgtccacaatatttagaaaattgacaattgtttgttatgagagagagagagcacaaaaaatatgaatttgttagagaaaaagataataactgaca 16845474  T
Q  289 attgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataa 388  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||          ||||   | |||||||||||| |||||||||    
T  16845473 attgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtgc----------aaatcattggtggattaaaattagggtataa 16845384  T
Q  389 taggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||    
T  16845383 taggaagaaaacgtgcaaaaatacacatcactattttggttttaattttctaaaaagacactt 16845321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 55 - 230
Target Start/End: Original strand, 21252861 - 21253040
Alignment:
Q  55 gaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaat------gaagaag 148  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||    
T  21252861 gaagactcgttggaattgctgatgagaggtgaagatggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaagaag 21252960  T
Q  149 aaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttg 230  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  21252961 aagtttcatcaatataa-ttttatattgacttaaaataattaaaaagatgtgta-aatatttagaaaattaacaattgtttg 21253040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 45273275 - 45272930
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||| | ||||||||||||| || ||||||||| ||||| |||       |||||||||| |||||  || |||||||| || |||| ||||||||||    
T  45273275 ttgagacaagaaaaataaaagattccatgaatgttcaaaaggaagaaaaaa-tggaagactcattggaagtgttgatgagatgtaaagatggagcaatag 45273177  T
Q  101 ttgaagactcatttgacaagataca---------agaacaagatgacaatgaagaagaaa---tttcatcaatataatttttatattgacttaaaataat 188  Q
    |||||||||||||| ||||||||||         |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  45273176 ttgaagactcatttcacaagatacagcaaaaacaagaacaagatgacaatgaagaagaagaagtttcatcaatataatttttatattgacttaaaataat 45273077  T
Q  189 taaaaagatgtgcacaatatttagaaaattaacaattgtttggtat--------gagagagagcgt--nnnnnnntaggaatttattggagaaaaagata 278  Q
    | |||||||||||||||||||||||||||| ||||||||||| |||        ||||||||||||         |||||||||  ||||||||||||||    
T  45273076 ttaaaagatgtgcacaatatttagaaaattgacaattgtttgttataagatagggagagagagcgtgcaaaaaaataggaatttgatggagaaaaagata 45272977  T
Q  279 ataactgacaattgtttgttacgagagaaatataacttattaaattt 325  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  45272976 ataactgacaattgcttgttacgagagaaatataacatattaaattt 45272930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 38589118 - 38588974
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaaa- 151  Q
    ||||||||||||| || ||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||     
T  38589118 tggaagactcgttagaattgctcatgagggatgaagagggagcaatagttgaagattcatttgacaagatacaagaacaagatgtcaatgaagaagaaaa 38589019  T
Q  152 --tttcatcaatataatttttatattgacttaaaataattaaaaa 194  Q
       ||||||||||||||||||||||||| |||||||||| |||||    
T  38589018 agcttcatcaatataatttttatattgatttaaaataataaaaaa 38588974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 288 - 451
Target Start/End: Original strand, 1397936 - 1398095
Alignment:
Q  288 aattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtat 386  Q
    |||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||        ||| ||||||||| |||||||||||||||||||    
T  1397936 aattttttgttacgggagaaacataacatattaaatttattggaaagataaagtgtgtg-----agataggaatttattggtggattaaaatgagggtat 1398030  T
Q  387 aataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  1398031 aattggaagaaaatgtgcaaaaatacacatcgctattttggtgttaattttctaaaaaaacactt 1398095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 284 - 446
Target Start/End: Complemental strand, 3309580 - 3309418
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagg 382  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||| ||| ||||| |||||||       ||| ||||||||| || ||||||||||||    
T  3309580 tgacaattgtttgttaagagagaaagataacatattaaattgattgaaaatataaaatgtgtgcaaaaag-taggaatttattgatgaattaaaatgagg 3309482  T
Q  383 gtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaaga 446  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  3309481 gtataataggaagaaaatgtgcaaaaatacacatcgttgttttgatgttaattttctaaaaaga 3309418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 451
Target Start/End: Original strand, 11084315 - 11084512
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnn 354  Q
    |||||||| ||||||||||| ||| ||| | |||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||           
T  11084315 aggaatttgttggagaaaaaaatattaattaacaaatgtttgttacgagagaaagataacatattaaatttattggaaagagaaagtgtgtgcaaaataa 11084414  T
Q  355 tagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||  ||| |||| || |||||||||||||||||||||||||||||| ||  ||||| |||| |  || ||||||||||||| ||| |||| |||||||    
T  11084415 tatgaatatattggtagattaaaatgagggtataataggaagaaaatgtataaaaacacactttactattttgatgttaatattccaaaatgacactt 11084512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 284 - 444
Target Start/End: Complemental strand, 29408501 - 29408342
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagg 382  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||| ||        ||  ||||| ||| |||||||||||||||    
T  29408501 tgacaattgtttgttatgagagaaagataacatattaaatttattgaaaagataaagtgtatg--aaaaaataagaatttgttggtggattaaaatgagg 29408404  T
Q  383 gtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaa 444  Q
    ||||||||| ||||||| |||||||||||||||||| | ||||| |||||||||||||||||    
T  29408403 gtataatagaaagaaaatgtgcaaaaatacacatcgttattttggtgttaattttctaaaaa 29408342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 3309636 - 3309558
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  3309636 ataatttttatattgacttaaaataatcaaaaagatgtgcacaatatttagaaaattgacaattgtttgttaagagaga 3309558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 451
Target Start/End: Complemental strand, 42872102 - 42871908
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| ||| ||||||| ||| ||||| |||| |||||||||||||||||| ||||| ||||||||||||| ||  || ||||||||  |          
T  42872102 taggaatttgttgaagaaaaa-atagtaactaacaaatgtttgttacgagagaaa-ataacatattaaatttattagagtgagaaagtgtg--caaaata 42872007  T
Q  354 ntagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||| ||| ||||| ||||||||||||||||||| ||||||||||||  ||||||||||||| ||||| ||||||||||| | |||||||| |||||||    
T  42872006 ataggaatatattggtggattaaaatgagggtatgataggaagaaaatatgcaaaaatacacttcgctattttgatgttagtattctaaaacgacactt 42871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 29408557 - 29408479
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  29408557 ataatttttatattgacttacagtaattaaaaagatgtgcacaatatttataaaattgacaattgtttgttatgagaga 29408479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 399
Target Start/End: Complemental strand, 25714013 - 25713867
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc-nnnnnn 353  Q
    |||||||| ||||||||||| | | | ||| |||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||           
T  25714013 aggaatttgttggagaaaaacacactgactaacaaatgtttgttacgagagaaagataacatattaaatttattggaaagagaaagtgtgtgcaaaaaaa 25713914  T
Q  354 ntagaaatttatt-gtggattaaaatgagggtataataggaagaaaa 399  Q
      || ||| |||| |||||||||||||||||||||||||||||||||    
T  25713913 aaaggaatatattggtggattaaaatgagggtataataggaagaaaa 25713867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 451
Target Start/End: Complemental strand, 20171109 - 20170918
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnn 354  Q
    |||||||| ||||||||||||||| ||||| | |  |||||||||||||||||| |||||  || ||| ||||   |||   ||||||||| |           
T  20171109 aggaatttgttggagaaaaagatagtaactaatacatgtttgttacgagagaaagataacaaatgaaaattat---aaa---aaagtgtgtacaaaaaaa 20171016  T
Q  355 tagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||| ||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||  |||||||| |||||||| |||||||    
T  20171015 taggaatatattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacttcgctatttcaatgttaatattctaaaacgacactt 20170918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 32113213 - 32113132
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||| || |||||| ||||||||||| ||||||||||||    
T  32113213 ataatttttatattgacttaaattaaataaagagatgtgcacaatatctaaaaaattgacaattgtttgttatgagagagag 32113132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 4316953 - 4317021
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagag 241  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  4316953 attgacttaaaataattaaaaaaatgtgcacactatttagaaaattgacaattgtttgttatgagagag 4317021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 443
Target Start/End: Original strand, 41541621 - 41541779
Alignment:
Q  286 acaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggt 384  Q
    |||| ||||||||||  |||||| ||||| |||||||||||||||||||| ||||||||||        ||  ||| |||| |||||||||||| |||||    
T  41541621 acaaatgtttgttacaggagaaaaataacatattaaatttattggaaagagaaagtgtgtgaaaaagaataagaatatattggtggattaaaataagggt 41541720  T
Q  385 ataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    |||||||||||||||  ||||||| ||||| | | | ||||| ||||||| ||||||||    
T  41541721 ataataggaagaaaatatgcaaaagtacactttgttattttggtgttaatattctaaaa 41541779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 12412943 - 12413080
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnnt-agaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaataca 413  Q
    ||||||||||||||||||||||||||||||||       | |||||  ||||  ||||||||||||||||||||||||||| |||  |||||||||||||    
T  12412943 tattaaatttattggaaagataaagtgtgtgcaaaaaaattagaaaactattaatggattaaaatgagggtataataggaaaaaagtgtgcaaaaataca 12413042  T
Q  414 catcgctgttttgatgttaattttctaaaaagacactt 451  Q
    | ||||| ||||  ||||||  |||||||| |||||||    
T  12413043 cttcgctttttttgtgttaaaattctaaaacgacactt 12413080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 12425003 - 12425140
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnnt-agaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaataca 413  Q
    ||||||||||||||||||||||||||||||||       | |||||  ||||  ||||||||||||||||||||||||||| |||  |||||||||||||    
T  12425003 tattaaatttattggaaagataaagtgtgtgcaaaaaaattagaaaactattaatggattaaaatgagggtataataggaaaaaagtgtgcaaaaataca 12425102  T
Q  414 catcgctgttttgatgttaattttctaaaaagacactt 451  Q
    | ||||| ||||  ||||||  |||||||| |||||||    
T  12425103 cttcgctttttttgtgttaaaattctaaaacgacactt 12425140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 451
Target Start/End: Original strand, 21253030 - 21253194
Alignment:
Q  286 acaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaa-atttatt-gtggattaaaatgaggg 383  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||        | || ||||||| |||||||||||||| ||    
T  21253030 acaattgtttgttactagagaaaaataacatattaaatttattgaaaagataaagtgtgtgcaaaaaaaaaaaatatttattggtggattaaaatgaagg 21253129  T
Q  384 tataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||  || ||||  ||||||||||  ||||||| ||||  |||||||||| |||||| ||||||    
T  21253130 tataata--aaaaaaatatgcaaaaatatgcatcgctattttagtgttaatttt-taaaaatacactt 21253194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 41541353 - 41541412
Alignment:
Q  73 ctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  41541353 ctgatgagaggtgaaaagggagaaatagttgaagactcatttgacaagatagaagaacaa 41541412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 7485991 - 7485913
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||| | ||| ||||| |||||||||    
T  7485991 ataattttgatatagacttaaaataattaaagagatatgcacaatatttagaaaattcaaaatcgtttgttatgagaga 7485913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 4700864 - 4700776
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg 346  Q
    |||||| ||||||||||||||| ||||| |||||| |||||||||| ||||| ||||| ||||||| |||||| ||||| ||||||||||    
T  4700864 gaatttgttggagaaaaagatactaactaacaattatttgttacgaaagaaagataacatattaaa-ttattgtaaagagaaagtgtgtg 4700776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 25965543 - 25965465
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||| |||  ||||| ||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||||    
T  25965543 ataattttgatacagacttcaaataattaaagagatatgcacaatatttagaaaattgaaaattgtttgttatgagaga 25965465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 27746816 - 27746894
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||| |||| ||||||||||||||||| || | |||||||||||||||||||| | ||||||||| || ||||||    
T  27746816 ataattttgatatagacttaaaataattaaataggtatgcacaatatttagaaaattgaaaattgtttgttaggagaga 27746894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 448
Target Start/End: Complemental strand, 25713686 - 25713500
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc-nnnnnnntagaaatt 362  Q
    ||||||||||| | ||||||| |||| ||||||||| | |||||| ||||| | ||||| |||||||||||| ||||||||| |         || |||     
T  25713686 ttggagaaaaacacaataactaacaaatgtttgttatgtgagaaaaataacatgttaaaattattggaaagagaaagtgtgttcaaaaataaaaggaata 25713587  T
Q  363 tattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagaca 448  Q
    ||||| | ||||||||||||||||||||||||||||||  || |||||||||| ||| | ||||  ||||||| || ||||| ||||    
T  25713586 tattgttagattaaaatgagggtataataggaagaaaaactgaaaaaatacacttcgttattttagtgttaatattttaaaacgaca 25713500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 420
Target Start/End: Original strand, 44898600 - 44898766
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnn 354  Q
    ||||||||  |||||||| ||| | ||||| ||||||||||||||||||||||| ||||  |||||||||||||  ||||  |||||||  |            
T  44898600 aggaatttggtggagaaagagaaagtaactaacaattgtttgttacgagagaaaaataatatattaaatttattaaaaagggaaagtgtaagaaaaaaaa 44898699  T
Q  355 tagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgct 420  Q
    ||  |||||||| ||||||||||||||||||||||||| || |||| ||| | |||||||| |||||    
T  44898700 taagaatttattggtggattaaaatgagggtataatagaaataaaatgtgtagaaatacacttcgct 44898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 417
Target Start/End: Complemental strand, 45271978 - 45271876
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataataggaagaaaacgtgc-aaaaatacac 414  Q
    ||||||||||||||||||||||||||||||||        | ||  | || ||||||||||||||||||||||||||||||||| || | ||||||||||    
T  45271978 tattaaatttattggaaagataaagtgtgtgcaaaaaataaaaatgtaatggtggattaaaatgagggtataataggaagaaaatgtacaaaaaatacac 45271879  T
Q  415 atc 417  Q
    |||    
T  45271878 atc 45271876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 1397830 - 1397886
Alignment:
Q  183 aataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagag 239  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||||    
T  1397830 aataattaaaaagatgtgcacaatatttaaaaagttgacaattgtttgttatgagag 1397886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 15507882 - 15508070
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatt- 362  Q
    ||||||||||| ||| ||||| |||| ||||||||| || ||||| ||||| ||||||||| || ||||| |  |||||| |||       |||||| |     
T  15507882 ttggagaaaaacatagtaactaacaaatgtttgttaagacagaaagataacatattaaattaat-ggaaaaaggaagtgtatgcaaaaaaatagaaaata 15507980  T
Q  363 tattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||| ||||||||||||| |||||||||||||||||  | |||||||||||  ||||| |||||  |||||| | |||||| |||||||    
T  15507981 tattggtggattaaaatgaaggtataataggaagaaagtgagcaaaaatacaattcgctattttggcgttaatatactaaaacgacactt 15508070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 34424518 - 34424382
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttat-tgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||||||||||||||||||||||||||||||||       ||| || ||||  |||||||||||| |||||||||||| || |||  ||| ||||||||||    
T  34424518 tattaaatttattggaaagataaagtgtgtgcaaagaaataggaaattatcagtggattaaaataagggtataatagaaaaaaagtgtgtaaaaatacac 34424419  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||||| ||||  ||||||  || ||||| |||||||    
T  34424418 ttcgctatttttgtgttaaaattttaaaacgacactt 34424382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 414
Target Start/End: Complemental strand, 4959119 - 4959020
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||||||||||| ||||||||||||||||||||        || || ||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  4959119 tattaaatttaatggaaagataaagtgtgtgcaaaaaaaaaggaaattattagtggattaaaatgagggtataataggaaaaaagtgtgcaaagatacac 4959020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 150040 - 149989
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaa 308  Q
    |||||| |||||| |||||||||||||| ||||||||||||||| |||||||    
T  150040 gaatttgttggagtaaaagataataactaacaattgtttgttacaagagaaa 149989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 11084222 - 11084273
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaat 224  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||| |||||    
T  11084222 attgacttaaattaattaaagagatgtgcacaatatttaaaaaattgacaat 11084273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 36243705 - 36243626
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgt 343  Q
    |||||||||||||||   ||  |||| ||||||||| || ||||| ||||| |||||||||||||||||||| |||||||    
T  36243705 ttggagaaaaagatagctaccaacaaatgtttgttatgaaagaaagataacatattaaatttattggaaagagaaagtgt 36243626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 33660062 - 33660100
Alignment:
Q  202 acaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  33660062 acaatatttagaaaattaacaattgtttgttatgagaga 33660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 1397778 - 1397815
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgt 199  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1397778 ataatttttatattgacttacaataattaaaaagatgt 1397815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 33024568 - 33024620
Alignment:
Q  80 gaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||| ||||||||    
T  33024568 gaggtgaagagagacaaatagttgaagactcgtttgacaagatagaagaacaa 33024620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 451
Target Start/End: Original strand, 33660661 - 33660741
Alignment:
Q  371 attaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||| ||||||||  ||||||| |||||||||||||| | ||| ||||  | ||||| |||||||| |||||||    
T  33660661 attaaaatgagagtataatacaaagaaaaggtgcaaaaatacactttgctatttttgtattaatattctaaaacgacactt 33660741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 411
Target Start/End: Complemental strand, 157695 - 157652
Alignment:
Q  368 tggattaaaatgagggtataataggaagaaaacgtgcaaaaata 411  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||    
T  157695 tggattaaaatgaggatataataggaagaaaatgtgtaaaaata 157652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 4959236 - 4959190
Alignment:
Q  194 agatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||||    
T  4959236 agatatgcacaatatttagaaaattgaaaattgtttgttatgagaga 4959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 346
Target Start/End: Complemental strand, 25965391 - 25965361
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtg 346  Q
    |||||||||||||||||||||||||||||||    
T  25965391 tattaaatttattggaaagataaagtgtgtg 25965361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 4317140 - 4317233
Alignment:
Q  359 aatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||| ||  |||||||||| |||||  ||||||| ||||  || |||| |||||||    
T  4317140 aatttattggtggattaaaataaggatataatagaaagaaaatgtagaaaaatacacttcgctaatttgatgctaatagtccaaaatgacactt 4317233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 15507816 - 15507857
Alignment:
Q  202 acaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  15507816 acaatatatagaaaattgacaattgtttgttatgagagagag 15507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 25714138 - 25714088
Alignment:
Q  80 gaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    ||||||||||||||  ||||||||||||||| |||||||| ||| ||||||||    
T  25714138 gaggtgaagaggga--aatagttgaagactcgtttgacaatataaaagaacaa 25714088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 33660029 - 33660065
Alignment:
Q  96 aatagttgaagactcatttgacaagatacaagaacaa 132  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  33660029 aatagttgaagactcgtttgacaagatagaagaacaa 33660065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 203; Significance: 1e-110; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 3 - 451
Target Start/End: Complemental strand, 16237455 - 16236996
Alignment:
Q  3 gagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagtt 102  Q
    |||||| ||||||||||||| || ||||||||| ||||||||        |||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  16237455 gagagaagaaaaataaaagattccatgaatgttcaaaagaaaaaaaaaagtggaagactcgttggaattgctaatgagagatgaagagggagcaatagtt 16237356  T
Q  103 gaagactcatttgacaagatacaagaacaaga--tgacaat---gaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagat 197  Q
    ||||||||||||||||||||||||||||||||    |||||   ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  16237355 gaagactcatttgacaagatacaagaacaagaacaaacaatgaagaagaagaagtttcatcaacataatttttatattgacttaaaataattaaaaagat 16237256  T
Q  198 gtgcacaatatttagaaaattaacaattgtttggtatgagagagag--cgt---nnnnnnntaggaatttattggagaaaaagataataactgacaattg 292  Q
    | | |||||||||| |||||| |||||| |||| ||||||||||||  |||          || |||||  ||| ||||||||||||||||||||| |||    
T  16237255 gcgtacaatatttaaaaaattgacaattatttgttatgagagagagaacgtgcaaaaaaaatatgaattggttgaagaaaaagataataactgacagttg 16237156  T
Q  293 tttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattta-ttgtggattaaaatgagggtataatag 391  Q
    |||||||||||||||| ||||| | |||||||||||||| |||||||||||||||       ||| |||||| || ||||||||||||||||||||||||    
T  16237155 tttgttacgagagaaaaataacattttaaatttattggagagataaagtgtgtgcaagaaaataggaatttatttatggattaaaatgagggtataatag 16237056  T
Q  392 gaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||| ||| |||||||||||||||| ||||  ||||||||||||||||||||||||    
T  16237055 gaagaaaatgtgaaaaaatacacatcgctatttttgtgttaattttctaaaaagacactt 16236996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 53 - 451
Target Start/End: Complemental strand, 37030778 - 37030374
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------tgacaatgaaga 146  Q
    |||||||||||||| | ||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||      ||||||||||||    
T  37030778 tggaagactcgttgaaattgatgatgagatgtgaagagggagcaatagttgaaaactcattcgacaagatacaagaacaagaacaagatgacaatgaaga 37030679  T
Q  147 agaaa---tttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    ||||    |||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||| |    
T  37030678 agaagaagtttcatcaatttaatttttatattgacttaaaataattgaaaagatgtacacaatatttagaaaattgacaattgtttgttatgagagagtg 37030579  T
Q  244 c--gtnnnnnnntaggaatttattggagaaaaagataa---taactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataa 338  Q
    |  ||       ||||||||| ||||||||||||||||   ||||| |||||          |||||||||||||| |||||||||||||||||||||||    
T  37030578 catgtaaaaaaataggaatttgttggagaaaaagataatagtaactcacaat----------gagagaaatataacatattaaatttattggaaagataa 37030489  T
Q  339 agtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgc-aaaaatacacatcgctgttttgatgttaattt 436  Q
    ||||| |||       | |||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||| |||   ||||  |||||||||    
T  37030488 agtgtttgcaaaacaattgaaatttattagtggattaaaatgagggtatactaggaagaaaatgtgcaaaaaatacacttcgtgatttttgtgttaattt 37030389  T
Q  437 tctaaaaagacactt 451  Q
    |||||||| ||||||    
T  37030388 tctaaaaaaacactt 37030374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 45646915 - 45647208
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnn----tagg 257  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||  || || ||| || ||           ||||    
T  45646915 ataattttaatattgatttaaaataattaaaaagatgcgcacaatatttagaaaattgacaattgtttattacgaaagatagagtgcgcaaaaaaatagg 45647014  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||       ||     
T  45647015 aatttgttggagaaaaagataataagtgacaattgtttgttatgagagaaagataacatattaaatttattggaaagataaagtgtgtgc-aaaaaatat 45647113  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     |||||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||| ||||||    
T  45647114 gaatttattgacggattaaaatgagggtataataggaagaaaatgtgcaagaatacacatcgctatttttatgttaattttctaaaaaaacactt 45647208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 123 - 451
Target Start/End: Original strand, 5493905 - 5494235
Alignment:
Q  123 acaagaacaagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaaca 222  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||||| | |    
T  5493905 acaagaataagatgacaatgaagaagaagtttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcatagtatctaaaaaattgata 5494004  T
Q  223 attgtttggtatgagagagagcg---tnnnnnnntaggaatttattggag-aaaaagataataactgacaattgtttgttacgagagaaatataacttat 318  Q
    ||||||| |||||| ||||||||           |||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||| ||||| |||    
T  5494005 attgttt-gtatgaaagagagcgcgcacaaaaaataggaatttattggagaaaaaaaataataagtgacaattgtttgttacgagaaaaagataacatat 5494103  T
Q  319 taaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatc 417  Q
    ||||||||||  |||||||||||||| |         || |||||||| ||||| | |||||||| |||||||||||||||| |||||||||||||||||    
T  5494104 taaatttattataaagataaagtgtgag-aaaaaaaaaggaatttattggtggagt-aaatgaggatataataggaagaaaatgtgcaaaaatacacatc 5494201  T
Q  418 gctgttttgatgttaattttctaaaaagacactt 451  Q
     || ||||  | ||||||||||||||||||||||    
T  5494202 actatttttgtattaattttctaaaaagacactt 5494235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 27817755 - 27818054
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnn----tagg 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| ||           |||     
T  27817755 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattgacaattgtttgttatgatagagagagtgcgcaaaaaaataga 27817854  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataac-----ttattaaatttattggaaagataaagtgtgtgcnnnnn 352  Q
    ||||| |||||||||||| |||||||||| ||||||||||||| | ||||| |||||      |||||||||||||| ||||||||| |||||||         
T  27817855 aatttgttggagaaaaagttaataactgataattgtttgttacaaaagaaagataacatattatattaaatttattgaaaagataaaatgtgtgcaaaaa 27817954  T
Q  353 nntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
      ||| |||||||| |||||||||||| ||||||||||||||| |||| |||||||||| ||||||| | ||||  ||||||||||||||||| ||||||    
T  27817955 aataggaatttattggtggattaaaataagggtataataggaataaaatgtgcaaaaatgcacatcgttatttttgtgttaattttctaaaaaaacactt 27818054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 45667752 - 45668054
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggt----atgagagaga----gcgtnnnnnnn 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    |||| |||||    |||            
T  45667752 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattgacaattgtttgtttgctatgatagagaaagtgcgcaaaaaaa 45667851  T
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||| ||||| |||||||||||||| |||||||||||||||||          
T  45667852 taggaatttgttggagaaaaatataataactgacaattgtttgttacggaagaaagataacatattaaatttattgaaaagataaagtgtgtgcaagaaa 45667951  T
Q  354 ntagaaatttatt-gtggattaaaatgagggtataatag----gaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagaca 448  Q
     ||  |||||||| |||||||||||||| ||||||||||     || |||| |||||||||||||||||||| ||||  |||| ||||||||||||| ||    
T  45667952 ataagaatttattggtggattaaaatgaaggtataatagaagaaaaaaaaaagtgcaaaaatacacatcgctatttttgtgttgattttctaaaaaggca 45668051  T
Q  449 ctt 451  Q
    |||    
T  45668052 ctt 45668054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 53 - 451
Target Start/End: Complemental strand, 21934338 - 21933910
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaa------caagatgacaatgaaga 146  Q
    |||||||||| |||||  || |||||  |||||||||||||| | ||||||||||||| |||||||| |||||||||      |||||||||||||||||    
T  21934338 tggaagactcattggaactgttgatggaaggtgaagagggagaagtagttgaagactcgtttgacaatatacaagaaaaaaaacaagatgacaatgaaga 21934239  T
Q  147 a---gaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |   ||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21934238 ataagaagtttcatccatataatttttatattgacttaaattaattaaagagatgtgcacaatatttagaaaattaacaattgtttgttatgagagagag 21934139  T
Q  244 cgt--nnnnnnntaggaatttattggagaaaaagataataactgacaa----ttgtt----------------tgttacgagagaaatataacttattaa 321  Q
     ||          |||||||| ||||||||||||||||||| | ||||    |||||                |||||||||| ||||||||| ||||||    
T  21934138 tgtgcaaaaaaaaaggaatttgttggagaaaaagataataagtaacaaatatttgttacgatcttaaaaaaaatgttacgagaaaaatataacatattaa 21934039  T
Q  322 atttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgct 420  Q
    ||||||||||||||||||  ||||||       |||| || |||| |||||||||| |||||||||||| | ||||||| |||||||||||||| | |||    
T  21934038 atttattggaaagataaa--gtgtgccaaaaaatagagatatattagtggattaaattgagggtataatcgtaagaaaatgtgcaaaaatacactttgct 21933941  T
Q  421 gttttgatgttaattttctaaaaagacactt 451  Q
     |||| |||  |||||||||||| |||||||    
T  21933940 attttcatgaaaattttctaaaacgacactt 21933910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 257 - 451
Target Start/End: Original strand, 2599478 - 2599673
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||       ||    
T  2599478 gaatttgttggtgaaaaagataataactgacaatggtttgttacgagagaaagataacatattaaatttattggaaagataaagagtctgcaaaaaagta 2599577  T
Q  357 gaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
      ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  2599578 tgaatttattggtggattaaaatgagggtataataggaataaaatgtgcaaaaatacacatcgctattttagtgttaattttctaaaaagacactt 2599673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 265 - 451
Target Start/End: Original strand, 2094196 - 2094385
Alignment:
Q  265 tggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattta 364  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||| ||||||||||||||| |       ||||||||||    
T  2094196 tggagaaaaagataataactgacaattatttgttacgagagaaagataacatattaaattttttgaaaagataaagtgtgtccaaaaaaatagaaattta 2094295  T
Q  365 tt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttct--aaaaagacactt 451  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| |  ||||||||||||    
T  2094296 ttggtggattaaaccgagagtataataggaagaaaatgtgcaaaaatacacatcactattttggtgttaatttttttaaaaaagacactt 2094385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 162 - 448
Target Start/End: Complemental strand, 42735312 - 42735026
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatt 261  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||| |||| || ||||||| ||         ||||||||    
T  42735312 ataatttttatattgacttaaaataattaaaaagacatgcacaatatttaaaaaattgacaattctttgttacgagagagtgcacaaaaaaataggaatt 42735213  T
Q  262 tattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaat 361  Q
    || | || ||||| ||||||||| | | ||||||||||||||| ||| ||||| ||||||||||||   ||||||||||||| |||       ||| |||    
T  42735212 tactaga-aaaaaaataataactaaaatttgtttgttacgagaaaaaaataacatattaaatttatcaaaaagataaagtgtatgcaaaaaaataggaat 42735114  T
Q  362 ttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcg-ctgttttgatgttaattttctaaaaagaca 448  Q
    |||||| ||||||||||| ||| |||||||| | ||||| || |||||||||||||||  |  |||| |||||||||| ||||||||||    
T  42735113 ttattgatggattaaaat-aggatataatagaacgaaaatgtacaaaaatacacatcgtttaatttggtgttaattttttaaaaagaca 42735026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 451
Target Start/End: Original strand, 34669095 - 34669294
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| |||| | |||||||||||| |||||| ||| |||||| | ||||| ||| | |||||||||||||| ||| ||||||||| |||          
T  34669095 taggaatttgttggtgtaaaagataataattgacaactgtctgttacaaaagaaagatatcatattaaatttattgaaaaaataaagtgtctgcaaaaaa 34669194  T
Q  354 ntagaaatttattg-tggattaaaatgagggtataatag-gaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||||||||||||| |||||||||||||| |||||||||  || |||| |||||||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  34669195 gtagaaatttattgatggattaaaatgagagtataatagaaaaaaaaatgtgcaaaaatacacatcgctattttaatgttaattttccaaaaaaacactt 34669294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 202 - 451
Target Start/End: Original strand, 296815 - 297065
Alignment:
Q  202 acaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacg 301  Q
    ||||||||||||||||| ||||||||||| |||||||||| |           |||||||| ||||  ||||||||| ||||| |||| ||||||||| |    
T  296815 acaatatttagaaaattgacaattgtttgttatgagagagtgtacaaaaaaaaaggaatttgttggtaaaaaagatagtaactaacaaatgtttgttatg 296914  T
Q  302 agagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaac 400  Q
    || |||| ||| | ||||||||| |||| ||||| |||||||||||       ||||||| ||||| |||  ||||||||||||||| |||||||||||     
T  296915 agcgaaagataccgtattaaattaattgaaaagagaaagtgtgtgcaaaaaaatagaaatatattggtggtataaaatgagggtatagtaggaagaaaat 297014  T
Q  401 gtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    || ||||||||||| ||||| ||||| ||||||| |||||||| |||||||    
T  297015 gtacaaaaatacacttcgctattttggtgttaatattctaaaacgacactt 297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 38750898 - 38750701
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------tgacaatgaaga 146  Q
    |||||||||| ||| |  ||||||||  |||||||||||||| | |||||||||| || |||||||| ||| |||||||| |      ||||||||||||    
T  38750898 tggaagactcattgaaactgctgatggaaggtgaagagggagaagtagttgaagattcgtttgacaatatataagaacaaaaacaaaatgacaatgaaga 38750799  T
Q  147 ---agaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagag 241  Q
       |||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||| ||||||| |||||  ||||||||||| ||||||||||    
T  38750798 agaagaaatttcatcgatataatttttatattgatttaaattaattaaagagatgtgcacgatatttaaaaaatagacaattgtttgttatgagagag 38750701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 181 - 451
Target Start/End: Complemental strand, 45759340 - 45759065
Alignment:
Q  181 aaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnnta----ggaatttattggagaaaaaga 276  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||  ||        |    | ||||  ||||| |||||||    
T  45759340 aaaataattaaaaatatgtgcacaatatttaaaaaattaacaattgtttgttatgggagagaaagtgcacaaaaaaaatgaaattcgttgga-aaaaaga 45759242  T
Q  277 taataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaa 375  Q
    ||||||| |||||||||| || || ||||||| ||||| |||||||||||| | ||| ||||||||||||        ||| |||||||| |||||||||    
T  45759241 taataaccgacaattgttcgtcacaagagaaagataacatattaaatttatggaaaaaataaagtgtgtgtaaaaaaatagtaatttattggtggattaa 45759142  T
Q  376 aatgagggtataataggaagaaaacgtgcaaaaatacacatcgct--gttttgatgttaattttctaaaaagacactt 451  Q
    | |||||||||||||||||||||| || | ||||||||||||  |    |||||||||||||||||||||| ||||||    
T  45759141 attgagggtataataggaagaaaatgtac-aaaatacacatcattaatatttgatgttaattttctaaaaaaacactt 45759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 34668959 - 34669040
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga 134  Q
    |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34668959 tggaagactcgttgaaattgctgatgaagggtgaagagggagcaatagttgaagactcatttgacaagataaaagaacaaga 34669040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 294 - 451
Target Start/End: Complemental strand, 38750618 - 38750461
Alignment:
Q  294 ttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataatagg 392  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||       || | || ||||| ||||||||| |||| ||||||||||    
T  38750618 ttgttacgagaaaattataacatattaaatttattggaaagataaagtgtgtgccaaaaa-taaagatatattggtggattaaattgagagtataatagg 38750520  T
Q  393 aagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||| |||||||||||||| | ||| |||| |||  |||||||||||| |||||||    
T  38750519 aagaaaatgtgcaaaaatacactttgctattttcatgaaaattttctaaaacgacactt 38750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 255 - 414
Target Start/End: Original strand, 1405299 - 1405462
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg----cnnn 350  Q
    |||||||| ||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||            
T  1405299 aggaatttgttggagaaaaaga-agtaactaacaattgtttgttacgagagaaagataacatattaaatttattggaaagagatagtgtgtgaagaaaaa 1405397  T
Q  351 nnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
         || |||||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  1405398 aaaaaagcaatttattagtggattaaaataagggtataataggaagtaaaagtgcaaaaatacac 1405462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 451
Target Start/End: Original strand, 27264247 - 27264413
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagg 382  Q
    |||||||| |||||||||| ||||| | |||  |||| |||||||||||||||| |||||||||       ||| ||||||||| ||||||||||| |||    
T  27264247 tgacaattatttgttacgatagaaagaaaac--attagatttattggaaagatatagtgtgtgcaaataaataggaatttattggtggattaaaattagg 27264344  T
Q  383 gtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||||||||||||||||  | |||||||| ||| ||||  |||| |||||||||| |||||||||||||    
T  27264345 atataataggaagaaaatatacaaaaataaacaacgctaatttggtgttaattttttaaaaagacactt 27264413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2599282 - 2599414
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||  ||||||||||| |||| ||||||||| ||||| |||       |||||||||||||||| || || |||| |||||||||| |||||||||    
T  2599282 ttgagaggagaaaaataaaaaactccatgaatgttcaaaaggaagagaaag-tggaagactcgttggaattactaatgaaaggtgaagagagagcaatag 2599380  T
Q  101 ttgaagactcatttgacaagatacaagaacaaga 134  Q
    |||||||||||||||||| ||||||| |||||||    
T  2599381 ttgaagactcatttgacatgatacaaaaacaaga 2599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 291 - 451
Target Start/End: Original strand, 9589211 - 9589375
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaa---atttattg-tggattaaaatgagggtat 386  Q
    |||||||||| ||| ||| ||||| |||||||||||||| ||||| ||||| |||||        ||||   || ||||| ||||||||||||||||||     
T  9589211 tgtttgttacaagataaaaataacatattaaatttattgaaaagagaaagtttgtgcaaaaaaaaagaaggtatatattggtggattaaaatgagggtac 9589310  T
Q  387 aataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||| |||||||||||||| | ||| ||||| ||||||| |||||||| |||||||    
T  9589311 aataggaagaaaaagtgcaaaaatacactttgctattttggtgttaatattctaaaatgacactt 9589375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 443
Target Start/End: Original strand, 376140 - 376319
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt 363  Q
    |||||||||| |||| ||||  |||| |||||||||| ||||||| ||||| |||||||||| ||||||||| |||||||||||       || |||| |    
T  376140 ttggagaaaaggatagtaaccaacaaatgtttgttaccagagaaagataacatattaaatttgttggaaagagaaagtgtgtgcaaaaaaataaaaatat 376239  T
Q  364 attg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    |||| ||||||||||||| ||||||| ||||||||||  |  |||||||||| ||||| ||||  ||||||| || |||||    
T  376240 attgatggattaaaatga-ggtataacaggaagaaaagattaaaaaatacacttcgctatttttgtgttaatattataaaa 376319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 45759710 - 45759639
Alignment:
Q  76 atgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaa 147  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||| |||||||||||||    
T  45759710 atgagaggtgaagagggagaaatagttaaagacacatttgacaagatacaataacaaggtgacaatgaagaa 45759639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 7259442 - 7259305
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaa-cgtgcaaaaataca 413  Q
    |||||| |||||||||||||||||||| ||||       || ||| ||||| |||||||||||||||||||||||||||| ||||  |||||||||||||    
T  7259442 tattaattttattggaaagataaagtgggtgcaaaaaaataaaaaattattagtggattaaaatgagggtataataggaaaaaaagtgtgcaaaaataca 7259343  T
Q  414 catcgctgttttgatgttaattttctaaaaagacactt 451  Q
    | | ||| ||||  ||||||  |||||||| |||||||    
T  7259342 ctttgctatttttgtgttaaaattctaaaacgacactt 7259305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 6749359 - 6749434
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattg 329  Q
    ||||||||| ||||||||| ||||| ||||| | ||||||||||||| ||||||| ||||| ||||||||||||||    
T  6749359 taggaatttgttggagaaagagatagtaactaaaaattgtttgttacaagagaaaaataacatattaaatttattg 6749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 6472440 - 6472367
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattg 329  Q
    ||||||||||||||||||| ||||| ||||| | ||||||||||||| ||||||| |||||  |||||||||||||    
T  6472440 taggaatttattggagaaagagatagtaactaaaaattgtttgttacaagagaaaaataac--attaaatttattg 6472367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 21916015 - 21916070
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg 346  Q
    |||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||    
T  21916015 tgtttgttacaagaaaaatataaaatattaaatttattggaaagataaagtgtgtg 21916070  T

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Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 21915851 - 21915905
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaa 216  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||    
T  21915851 ataatttttataatgacttaaattaattaaagagatgtgcacaatatttaaaaaa 21915905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 22722346 - 22722256
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
    |||||| ||| ||||||||| | ||||| ||||||||  |||| |||||||  |||||  ||||||||||||||||||| |||||||||||    
T  22722346 gaatttgttgaagaaaaagagagtaactaacaattgtaagttatgagagaatgataacacattaaatttattggaaagaaaaagtgtgtgc 22722256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 25841748 - 25841674
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatga 236  Q
    |||||||| |||| ||||||||||||||||| | || || | ||||||||||||||||| ||||||||| |||||    
T  25841748 ataattttgatatagacttaaaataattaaagatatatgtaaaatatttagaaaattaaaaattgtttgttatga 25841674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 34823890 - 34823815
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagag 239  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||||||| |||||| ||||||| ||| ||| ||||    
T  34823890 ataatttttatattgacttgaaataattaaagagatgtg--caatatttaaaaaattgacaattgcttgttataagag 34823815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 9589050 - 9589131
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga 134  Q
    ||||||||| ||||||   ||| ||| |||||||||||| || ||||||||||||||| || ||||||||| ||||||||||    
T  9589050 tggaagacttgttggaacggcttatgggaggtgaagaggaagaaatagttgaagactcgttcgacaagatagaagaacaaga 9589131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 21959464 - 21959328
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||||| ||||||| |||| |||||||||||||       ||| || ||||| |||||||||||||||||||||||||||| ||   ||||||||| ||||    
T  21959464 tattatatttattagaaatataaagtgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtataataggaaaaaggtgtgcaaaaagacac 21959365  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||| | |||| |||||||  || ||||| |||||||    
T  21959364 ttcgttatttttatgttaaaattttaaaacgacactt 21959328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 19229430 - 19229368
Alignment:
Q  285 gacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
    ||||| |||||||||  ||||||| ||||| |||||||||||||||||||| ||||| |||||    
T  19229430 gacaaatgtttgttatcagagaaaaataacatattaaatttattggaaagagaaagtctgtgc 19229368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 34823686 - 34823612
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaa 441  Q
    ||||||||||| |||||||| ||||||||||||  | ||||||||||| |||||  |||| ||||||| ||||||    
T  34823686 gtggattaaaacgagggtatgataggaagaaaatatacaaaaatacacttcgctaatttggtgttaatattctaa 34823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 6472519 - 6472467
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaatt 225  Q
    |||||||||||||||||||  |||| ||||||||||||| |||||| ||||||    
T  6472519 attgacttaaaataattaacgagatttgcacaatatttaaaaaattgacaatt 6472467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 414
Target Start/End: Complemental strand, 25841604 - 25841507
Alignment:
Q  315 ttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaataca 413  Q
    ||||||||||||||||||||||||| |||||         ||| || ||||| ||| ||||||||||||||||||||| || |||| |||||||||||||    
T  25841604 ttattaaatttattggaaagataaaatgtgt---aaaaaataggaaattattagtgaattaaaatgagggtataatagaaaaaaaatgtgcaaaaataca 25841508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 296739 - 296818
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    |||||||||| |||||   ||||||| ||||||||||| ||  ||||||||| ||||| ||||| |||||| ||||||||    
T  296739 tggaagactcattggaacggctgatgggaggtgaagagagataaatagttgaggactcgtttgataagatagaagaacaa 296818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 5493856 - 5493895
Alignment:
Q  86 aagagggagcaatagttgaagactcatttgacaagataca 125  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  5493856 aagaaggagcaatggttgaagactcatttgacaagataca 5493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 414
Target Start/End: Complemental strand, 633202 - 633076
Alignment:
Q  288 aattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtat 386  Q
    |||| ||| |||||||||||| ||||| ||||||||||||| ||||   ||||||||||         |||| ||||||| |||||||||||||| ||||    
T  633202 aattatttattacgagagaaagataacatattaaatttattagaaaagaaaagtgtgtgaaaaaagtaagaa-tttattggtggattaaaatgagagtat 633104  T
Q  387 aataggaagaaaacgtgcaaaaatacac 414  Q
    ||| | ||||||| ||| ||||||||||    
T  633103 aattgaaagaaaatgtggaaaaatacac 633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 6512348 - 6512294
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgt 227  Q
    |||||||||||||||||||| |||| |||  |||||||| |||||| ||||||||    
T  6512348 attgacttaaaataattaaagagatttgctaaatatttaaaaaattgacaattgt 6512294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 6749284 - 6749338
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgt 227  Q
    |||||||||||||||||||  |||| |||||| |||||| |||||| ||||||||    
T  6749284 attgacttaaaataattaacgagatttgcacagtatttaaaaaattgacaattgt 6749338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 7259558 - 7259512
Alignment:
Q  194 agatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||||    
T  7259558 agatatgcacaatatttagaaaattgaaaattgtttgttatgagaga 7259512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 12568817 - 12568871
Alignment:
Q  274 agataataactgacaattgtttgttacgagagaaatataacttattaaatttatt 328  Q
    ||||| ||||| |||| |||||||||||||| ||||||||  |||||||||||||    
T  12568817 agatagtaactaacaaatgtttgttacgagataaatataatatattaaatttatt 12568871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 12568923 - 12568977
Alignment:
Q  380 agggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaat 434  Q
    ||||||||||| |||||||| |||||||||||||| || || ||||| |||||||    
T  12568923 agggtataataagaagaaaatgtgcaaaaatacacttcactattttggtgttaat 12568977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 13545281 - 13545335
Alignment:
Q  274 agataataactgacaattgtttgttacgagagaaatataacttattaaatttatt 328  Q
    ||||| ||||| |||| |||||||||||||| ||||||||  |||||||||||||    
T  13545281 agatagtaactaacaaatgtttgttacgagataaatataatatattaaatttatt 13545335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 13545387 - 13545441
Alignment:
Q  380 agggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaat 434  Q
    ||||||||||| |||||||| |||||||||||||| || || ||||| |||||||    
T  13545387 agggtataataagaagaaaatgtgcaaaaatacacttcactattttggtgttaat 13545441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 1272672 - 1272721
Alignment:
Q  286 acaattgtttgttacgagagaaatataacttattaaatttattggaaaga 335  Q
    |||| |||||||||| || |||| ||||| ||||||||||||||||||||    
T  1272672 acaaatgtttgttaccagcgaaaaataacatattaaatttattggaaaga 1272721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 18671600 - 18671633
Alignment:
Q  96 aatagttgaagactcatttgacaagatacaagaa 129  Q
    |||||||||||| |||||||||||||||||||||    
T  18671600 aatagttgaagattcatttgacaagatacaagaa 18671633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5493782 - 5493826
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaag 45  Q
    |||||||| |||||||||||||||| ||||| ||| |||||||||    
T  5493782 ttgagagaagaaaaataaaagactccatgaacgttcaaaagaaag 5493826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 399
Target Start/End: Complemental strand, 19229348 - 19229316
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaa 399  Q
    |||||||||||||||||||||||| ||||||||    
T  19229348 gtggattaaaatgagggtataataagaagaaaa 19229316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 451
Target Start/End: Original strand, 34824239 - 34824311
Alignment:
Q  379 gagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||| |||| ||||||| |||||||||||||| || ||  |||| ||| ||| |||||||| |||||||    
T  34824239 gagggtatgatagaaagaaaatgtgcaaaaatacacttcactaatttggtgtgaatattctaaaacgacactt 34824311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42735468 - 42735428
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaag 41  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  42735468 ttgagagaagaaaaataaaagattccatgaatgtttaaaag 42735428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 55 - 444
Target Start/End: Complemental strand, 13254566 - 13254159
Alignment:
Q  55 gaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------tgacaatgaagaag 148  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||    
T  13254566 gaagactcgttggaattgctgatgagaggtgaagagtgagcaatagttgaagactcatttgacaagatacaagaacaagaacaagatgacaatgaagaag 13254467  T
Q  149 aaa---tttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcg 245  Q
    ||    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||| |||||||||||| |    
T  13254466 aagaagtttcatcaatataatttttatattgacttaaaataattaaaaagatgcgcataatatttaaaaaattgacaattgtttgttatgagagagagag 13254367  T
Q  246 --------tnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagata 337  Q
                     |||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  13254366 cgcgcaaaaaaaaaaaaaggaattttttggagaaaaagataaaaactgacaattgtttgttacgagagaaaaataacatattaaatttattggaaagata 13254267  T
Q  338 aagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattt 436  Q
     ||||||||        ||| ||||||||| |||||||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  13254266 tagtgtgtgaaaaaaaataggaatttattgatggattaaaatgagagcataatatgaagaaaatgtgcaaaaatacacatcgctattttgatgttaattt 13254167  T
Q  437 tctaaaaa 444  Q
    ||||||||    
T  13254166 tctaaaaa 13254159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 254 - 451
Target Start/End: Original strand, 41117405 - 41117603
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| ||| ||||||||||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||          
T  41117405 taggaatttgttgaagaaaaagataataagtgacgtttgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtgcaaaaaa 41117504  T
Q  354 ntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     || ||||||||| ||||||||||||||||||||||||| || ||||  |||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  41117505 ataaaaatttattggtggattaaaatgagggtataatagaaaaaaaaaatgcaaaaatacacatcgctagtttggtgttaattttctaaaaagacactt 41117603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 302
Target Start/End: Complemental strand, 40519023 - 40518764
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaa------caagatgacaatgaaga 146  Q
    |||||||||| |||||   |||||||  |||||||||||||| | |||||||||| || |||||||| |||||||||      |||||||||||||||||    
T  40519023 tggaagactcattggaaccgctgatggaaggtgaagagggagaagtagttgaagattcgtttgacaatatacaagaaaaaaaacaagatgacaatgaaga 40518924  T
Q  147 agaaa---tttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    ||||    ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40518923 agaagaagtttcatccatataatttttatattgacttaaattaattaaagagatgtgcacaatatttagaaaattaacaattgtttgttatgagagagag 40518824  T
Q  244 cgt-nnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacga 302  Q
     ||         |||||||| ||||||||||||||| ||| | |||| ||||||||||||    
T  40518823 tgtgaaaaaaaaaggaatttgttggagaaaaagatactaagtaacaaatgtttgttacga 40518764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 258 - 448
Target Start/End: Complemental strand, 6295391 - 6295200
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||| || |||||||||| ||||||        |||    
T  6295391 aatttgttggagaaaaaaataataaccgacaattgtttgttacgagagaaagataacatattaaattttttagaaagataaaatgtgtgtaaaaaaatag 6295292  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagaca 448  Q
    |||||||||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  6295291 aaatttattggtggagtaacatgagggtataatagaaagaaaatgtgcaaaaatacacatcgctattttagtgttaattttctaaaaagaca 6295200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 451
Target Start/End: Complemental strand, 36319613 - 36319446
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgaggg 383  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||       | | || |||| ||||||||||||||| |    
T  36319613 tgacaattgtttgttacgagataaatataacatattaaatttattggaaagataaggtgtgtgcaaaaaaattggaacttatggtggattaaaatgagag 36319514  T
Q  384 tataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||| ||||    
T  36319513 tataataggaagaaaatgtgcaaaaatacacatcgctatttttgtgttaattttctaaaaagatactt 36319446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 6295604 - 6295447
Alignment:
Q  5 gagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttga 104  Q
    |||| |||||||||||||||| |||||| || ||||| |||       ||||||| |||||||| |||||||||||| ||||||| |||||| || ||||    
T  6295604 gagaagaaaaataaaagactccatgaatcttcaaaaggaagaaaaag-tggaagattcgttggaattgctgatgagaagtgaagaaggagcactaattga 6295506  T
Q  105 agactcatttgacaagatacaagaacaagatgacaatgaagaagaaatttcatcaatat 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6295505 agactcatttgacaagatacaagaacaagatgacaatgaagaagaagtttcatcaatat 6295447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 36319820 - 36319601
Alignment:
Q  11 aaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactc 110  Q
    ||||| |||||| || |||||||||||||||||||       | ||| ||||||||||  |||||||||||||||||||| ||| |||||||||| ||||    
T  36319820 aaaaaaaaaagattccatgaatgtttaaaagaaagaaaaag-tagaatactcgttggaactgctgatgagaggtgaagagagagaaatagttgaaaactc 36319722  T
Q  111 atttgacaagatacaagaac------aagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcaca 204  Q
    |||||| |||||||||||||      ||||||||||| |||||||| ||| |     |||||||||| |||||||||||||||||||||| || | ||||    
T  36319721 atttgataagatacaagaacaagagcaagatgacaattaagaagaagtttga-----ataatttttacattgacttaaaataattaaaaaaatatacaca 36319627  T
Q  205 atatttagaaaattaacaattgtttg 230  Q
    ||||||| |||||| |||||||||||    
T  36319626 atatttaaaaaattgacaattgtttg 36319601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 289 - 451
Target Start/End: Original strand, 39386986 - 39387149
Alignment:
Q  289 attgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtata 387  Q
    |||||| ||||| ||||||| ||||| ||| ||||||||| ||||||||||||||||||       ||| |||||||| |||||||||||||||  ||||    
T  39386986 attgttggttacaagagaaagataacatataaaatttattcgaaagataaagtgtgtgcaaaaaagtaggaatttattcgtggattaaaatgagaatata 39387085  T
Q  388 ataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||  ||||||| ||||||||||| |||||||  |||||||||||||| ||||||    
T  39387086 ataggaagaaaatttgcaaaagtacacatcgctattttgatagtaattttctaaaaatacactt 39387149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 162 - 302
Target Start/End: Original strand, 52415450 - 52415590
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatt 261  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| || |||||| || ||        | |||||    
T  52415450 ataatttttatattgacttaaattaattaaagagatgtgcacaatatttagaaaattgacaattgtttgttaggagagaaagtgtgcaaaaaaaagaatt 52415549  T
Q  262 tattggagaaaaagataataactgacaattgtttgttacga 302  Q
     ||| |||||||||||| ||||| |||| ||||||||||||    
T  52415550 aatttgagaaaaagatagtaactaacaaatgtttgttacga 52415590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 451
Target Start/End: Original strand, 52415605 - 52415767
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg-cnnnnnnntagaaatttatt-gtggattaaaatgagggtataa 388  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| |       |||  || |||| |||||||||| |||||||||||    
T  52415605 tgtttgttacgagaaaaatataacatattaaatttattggaaagaaaaagtgtgtgccgaaaaaatagggatatattggtggattaaattgagggtataa 52415704  T
Q  389 taggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||| ||| |||||||||| | ||| ||||  || ||||||||||||| |||||||    
T  52415705 taggaagaaaatgtgtaaaaatacactttgctattttcgtggtaattttctaaaacgacactt 52415767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 30280921 - 30281001
Alignment:
Q  163 taatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  30280921 taatttttatattaacttaaattaattaaagagatgtgcacaatatttaaaaaattaacaattgtttgttatgagagagag 30281001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 10430277 - 10430194
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
    ||||||||||||||| ||||| |||||| ||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||    
T  10430277 ttggagaaaaagatagtaactaacaattatttgttatgagagaaagataacgtattaaatttattggaaagaaaaagtgtgtgc 10430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 19270107 - 19270292
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt 363  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||| ||||| | |||       ||  |||||    
T  19270107 ttggagaaaaagatagtaactaacaattgtttgttacgagagagataaaa--tattaaatttattggaaagagaaagtttatgc-aaaaaataacaattt 19270203  T
Q  364 att-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||| |||||||||||||||||||||||| ||  |||| |||||| ||||||| |||||  |||| ||||||| ||  |||| |||||||    
T  19270204 attggtggattaaaatgagggtataataagacaaaaatgtgcaataatacacttcgctaatttggtgttaatatttcaaaacgacactt 19270292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 45925840 - 45925923
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||| ||||| |||||||||||||| ||||| |||||||||||    
T  45925840 ttggagaaaaagataataactaacaaatgtttgttaggagagaaagataacatattaaatttattgaaaagagaaagtgtgtgc 45925923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 451
Target Start/End: Complemental strand, 4395726 - 4395534
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||||||||||||||| ||||  ||||  |||||||||||| |||| ||||   ||||||||||||||||||| |||||||| |        |||    
T  4395726 aatttgttggagaaaaagatagtaaccaacaaaagtttgttacgagggaaagataaa--attaaatttattggaaagagaaagtgtgcgtagaaaaatag 4395629  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||| ||||| ||||||||||||| |||||||||||||||||| ||| |||||||||| ||||| ||||  ||||||  ||| |||| |||||||    
T  4395628 gaatatattggtggattaaaatgatggtataataggaagaaaaggtgaaaaaatacacttcgctatttttgtgttaaaattccaaaacgacactt 4395534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 412
Target Start/End: Complemental strand, 11795650 - 11795508
Alignment:
Q  270 aaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gt 368  Q
    ||||||||| ||||| | || |||||||||  ||| ||||||||| |||||||||||||||||||| |||||||||||        || ||| |||| ||    
T  11795650 aaaaagatagtaactaaaaaatgtttgttataagaaaaatataacatattaaatttattggaaagagaaagtgtgtgcaaaaaaa-agtaatatattggt 11795552  T
Q  369 ggattaaaatgagggtataataggaagaaaacgtgcaaaaatac 412  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  11795551 ggattaaaatgagggtataatatgaagaaaatgtgcaaaaatac 11795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 4671726 - 4671803
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagag 239  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| ||||||||||| | ||||||    
T  4671726 ataatttttatattgacttaaattaattaaatagatgtgcacaatatttaaaaaattgacaattgtttgttgtgagag 4671803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 442
Target Start/End: Complemental strand, 23699008 - 23698858
Alignment:
Q  293 tttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataatag 391  Q
    |||||||| ||| ||||||||| ||||||||| |||| |||||||||||||||||       ||  ||| ||||| ||||||||| ||||  ||||||||    
T  23699008 tttgttacaagataaatataacatattaaattcattgaaaagataaagtgtgtgccaaaaaataagaatatattggtggattaaattgagattataatag 23698909  T
Q  392 gaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaa 442  Q
    |||||||| |||||||||||||| ||  | ||||  |||||||||||||||    
T  23698908 gaagaaaatgtgcaaaaatacacttcattattttcgtgttaattttctaaa 23698858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 414
Target Start/End: Complemental strand, 40518747 - 40518628
Alignment:
Q  294 ttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataatagg 392  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||||  ||||||       |||| || |||| || ||||||| |||||||||||||||    
T  40518747 ttgttacgagaaaaatataacatattaaatttattggaaatataaa--gtgtgccaaaaaatagagatatattagtagattaaattgagggtataatagg 40518650  T
Q  393 aagaaaacgtgcaaaaatacac 414  Q
    ||||||| ||||||||||||||    
T  40518649 aagaaaatgtgcaaaaatacac 40518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 19269983 - 19270046
Alignment:
Q  71 tgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga 134  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  19269983 tgctgatgggaggtgaagacggagaaatagttgaagactcatttgacaagatagaagaacaaga 19270046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 32769304 - 32769383
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |||||||||||||||||||||| |||||||| |||||||  ||||||||| |||||| |||||| |||| ||||||||||||    
T  32769304 ataatttttatattgacttaaattaattaaagagatgtg--caatatttaaaaaattgacaattatttgttatgagagagag 32769383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 11817592 - 11817499
Alignment:
Q  359 aatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||| ||| |||  |||| |||||||||| |||||||| ||||    
T  11817592 aatttattggtggattaaaatgagggtataataggaaaaaaatctgcaaaaatacgcattgctaatttggtgttaattttttaaaaagaaactt 11817499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 414
Target Start/End: Original strand, 2752078 - 2752235
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| ||| ||||||||| | ||| | |||||||||| |||| ||||||| | |||  || ||||||||| |||||| |||||||||||       ||    
T  2752078 gaatttgttgaagaaaaagaaagtaattaacaattgtttattacaagagaaagacaacacataaaatttatttgaaagagaaagtgtgtgcaaaaaa-ta 2752176  T
Q  357 gaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
     ||| |||||| | |||||||||||||||||||||||||||||| || |||||||||||    
T  2752177 taaacttattggtcgattaaaatgagggtataataggaagaaaatgtacaaaaatacac 2752235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 451
Target Start/End: Original strand, 4671872 - 4672033
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataat 389  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||||||||           |||| || |||| ||| |||||| ||| ||||||||    
T  4671872 tgtttgttacgagaaaaatataacatgttaaatttattggaaagataaagtgtaattcaaaaattagagatatattggtgaattaaattgaaggtataat 4671971  T
Q  390 aggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||  ||||||||||||| | ||| ||||  ||  |||||||||||| |||||||    
T  4671972 aggaagaaaatatgcaaaaatacactttgctattttcgtggaaattttctaaaacgacactt 4672033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 2656042 - 2656120
Alignment:
Q  160 atataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgaga 238  Q
    |||||||||| || | ||||| ||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||    
T  2656042 atataattttgatctagacttgaaataattaaagagatatgcacaatatttagaaaatttaaaattgtttgttatgaga 2656120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 411
Target Start/End: Original strand, 32769462 - 32769569
Alignment:
Q  306 aaatataacttattaaatttattggaaagataaagtgtgtg-cnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtg 403  Q
    ||||||||| ||||||||||||||||||||||||||||||| |       |||| || |||| |||||||||| ||||| |||||||||||||||| |||    
T  32769462 aaatataacatattaaatttattggaaagataaagtgtgtgccaaaaaaatagagatatattggtggattaaattgaggatataataggaagaaaatgtg 32769561  T
Q  404 caaaaata 411  Q
     |||||||    
T  32769562 aaaaaata 32769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 30281082 - 30281213
Alignment:
Q  297 ttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaag 395  Q
    |||||||| |||||||||||||||||||||||| |||||||||   |||||       |||| || ||||  || |||||| ||||||||||||||||||    
T  30281082 ttacgagaaaaatataacttattaaatttattgaaaagataaa--ctgtgccaaaaaatagagatatattaatgaattaaattgagggtataataggaag 30281179  T
Q  396 aaaacgtgcaaaaatacacatcgctgttttgatg 429  Q
    ||||  ||||||||||||| | ||| ||||||||    
T  30281180 aaaatatgcaaaaatacactttgctattttgatg 30281213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 52957743 - 52957816
Alignment:
Q  370 gattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||| ||  ||||||||||||||| ||||||||    
T  52957743 gattaaaatgatggtataacatgaagaaaaggtgcaaaaatacacttcattgttttgatgttaatattctaaaa 52957816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 1394887 - 1394971
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||||||| |||| ||||||| ||| |||||||||| || ||  |||||||| ||| |||||||| |||||||    
T  1394887 gtggattaaaatgagggtatgatagaaagaaaatgtgaaaaaatacacttcactaatttgatgtgaatattctaaaacgacactt 1394971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 41116831 - 41116879
Alignment:
Q  167 ttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaa 215  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  41116831 ttttatattggcttaaaataatcaaaaagatgtgcacaatatttagaaa 41116879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 11237735 - 11237600
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||||||||||||||||||| |||||||       | |||| ||||| |||||||||||||| ||||||||||||| ||||  |||||||||||||    
T  11237735 tattaaatttattggaaagataaaatgtgtgcaaaaaaattgaaaattattagtggattaaaatgatggtataataggaa-aaaaaatgcaaaaatacac 11237637  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
     || || ||||  |||||   |||||||| |||||||    
T  11237636 ttcactatttttgtgttataattctaaaacgacactt 11237600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 399
Target Start/End: Complemental strand, 21965826 - 21965683
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| ||| ||||||||| | | ||| ||||||||||||||  ||||||| |||||  |||| |||||||||| | | |||||||||||       ||    
T  21965826 gaatttgttgaagaaaaagagagtgactaacaattgtttgttataagagaaagataacacattatatttattggacaaagaaagtgtgtgccaaaaaata 21965727  T
Q  357 gaaatttattg-tggattaaaatgagggtataataggaagaaaa 399  Q
    |||||||||||   |||||| | |||||||||||||||||||||    
T  21965726 gaaatttattgacagattaacacgagggtataataggaagaaaa 21965683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 11237871 - 11237814
Alignment:
Q  71 tgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaaga 128  Q
    |||||||| ||| |||||| |||| | |||||||||||||||||||||||||||||||    
T  11237871 tgctgatgggagctgaagatggagaagtagttgaagactcatttgacaagatacaaga 11237814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 43021315 - 43021375
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataac 314  Q
    ||||||||| ||||||||||||||| ||||| |||||||||| ||| |||||||| |||||    
T  43021315 taggaatttgttggagaaaaagatattaactaacaattgtttattatgagagaaaaataac 43021375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 30280292 - 30280420
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgac---aagatacaag----aacaagatgacaat---g 142  Q
    |||||||||| |||||  ||||||||  |||||||||||||| | |||||||||| || ||||||   || |||||||    ||||||||||||||   |    
T  30280292 tggaagactcattggaactgctgatggaaggtgaagagggagaagtagttgaagattcgtttgacaataatatacaagaaaaaacaagatgacaatgaag 30280391  T
Q  143 aagaagaaatttcatcaatataattttta 171  Q
    |||||||| ||||||| ||||||||||||    
T  30280392 aagaagaagtttcatccatataattttta 30280420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 52957508 - 52957587
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    |||||||||| ||||| | | ||||| |||||||||| | || ||||||||||||||| |||||||||||| || |||||    
T  52957508 tggaagactcattggaatggttgatgggaggtgaagatgaagaaatagttgaagactcctttgacaagatagaataacaa 52957587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 1454064 - 1453955
Alignment:
Q  281 aactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatg 379  Q
    |||| |||| ||||||||  |||||||| |||||||||||||||||||| ||||| ||  | |||||       ||||||| ||||| |||||||||||     
T  1454064 aactaacaactgtttgttgtgagagaaaaataacttattaaatttattgaaaagagaatatatgtgcaagaaaatagaaatctattgatggattaaaata 1453965  T
Q  380 agggtataat 389  Q
    ||||||||||    
T  1453964 agggtataat 1453955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 41116789 - 41116829
Alignment:
Q  167 ttttatattgacttaaaataattaaaaagatgtgcacaata 207  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  41116789 ttttatattggcttaaaataatcaaaaagatgtgcacaata 41116829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 347
Target Start/End: Complemental strand, 23697558 - 23697527
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgc 347  Q
    ||||||||||||||||||||||||||||||||    
T  23697558 tattaaatttattggaaagataaagtgtgtgc 23697527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 412
Target Start/End: Complemental strand, 23699862 - 23699827
Alignment:
Q  377 atgagggtataataggaagaaaacgtgcaaaaatac 412  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23699862 atgagggtataataggaagaaaatgtgcaaaaatac 23699827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 192
Target Start/End: Complemental strand, 1394547 - 1394517
Alignment:
Q  162 ataatttttatattgacttaaaataattaaa 192  Q
    |||||||||||||||||||||||||||||||    
T  1394547 ataatttttatattgacttaaaataattaaa 1394517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 4395852 - 4395774
Alignment:
Q  56 aagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga 134  Q
    ||||||| ||||| | | ||||| |||||||| ||  || ||||||||||||||| ||| |||||||| ||||||||||    
T  4395852 aagactcattggaatggatgatgggaggtgaatagaaagaaatagttgaagactcgtttaacaagatagaagaacaaga 4395774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 6295452 - 6295412
Alignment:
Q  203 caatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |||||||||||||||| |||||| |||| ||||||||||||    
T  6295452 caatatttagaaaattgacaattatttgttatgagagagag 6295412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 53 - 441
Target Start/End: Complemental strand, 12436543 - 12436151
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaaat 152  Q
    ||||| ||||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  12436543 tggaacactcgttagaattgttgatgagaggtgaagagggagcaatggttgaagactcatttgacaagatacaagaacaagatgacaatgaaaaagaagt 12436444  T
Q  153 ttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgag----agagagcgtnn 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | ||||    |||| |||       
T  12436443 ttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattgataattgtttgttttgagagaaagagtgcgcaa 12436344  T
Q  249 nnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcn 348  Q
         ||||||||| ||| |||||||||||||||| |||||| ||||||||| ||||||| ||||| |||||||| ||||| ||| |||||||||||       
T  12436343 acaaataggaatttgttgaagaaaaagataataaccgacaatagtttgttaccagagaaagataacatattaaatatattgaaaaaataaagtgtgt-ta 12436245  T
Q  349 nnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaa 441  Q
          ||  |||||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||  | ||||| ||||||||||||||    
T  12436244 aaaaaatatgaatttattggtggattaaaatgagtgtataatatgaagaaaatgtgcaaaaatacacatcattattttggtgttaattttctaa 12436151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 42673935 - 42673580
Alignment:
Q  4 agagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttg 103  Q
    ||||| |||||||||||||||| |||||| || |||||||||        | |  |||||| | | ||||||||||| |||||||| |||||| ||||||    
T  42673935 agagaagaaaaataaaagactccatgaattttcaaaagaaagaaaaagtggaattactcgtcgaaattgctgatgaggggtgaagatggagcagtagttg 42673836  T
Q  104 aagactcatttgacaagatacaagaa------caagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagat 197  Q
    ||||||||| ||||||||||||||||      ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  42673835 aagactcatctgacaagatacaagaataagaacaagatgacaatgaagaagaagtttcatcaatataatttttatattgactttaaataattaaaaagat 42673736  T
Q  198 gtgcacaatatttagaaaattaacaattgtttggtatgagagagag--cgtnnnnnnnta----ggaatttattggagaaaaagataataactgacaatt 291  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||  |||        |      ||||| || ||||||||||||||||| |||||||    
T  42673735 gtgcacaatatttaaaaaattgacaattgtttgttatgagagagagatcgtgcaaaaaaaaaagaaaatttgttagagaaaaagataataaccgacaatt 42673636  T
Q  292 gtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc 347  Q
     ||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  42673635 atttgttatgagagaaatataacatattaaatttattagaatgataaagtgtgtgc 42673580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 63 - 328
Target Start/End: Complemental strand, 18413167 - 18412897
Alignment:
Q  63 gttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatga---caatgaagaagaaatttcatca 159  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||  |   ||||||||||||| ||||||||    
T  18413167 gttggaattgctcattagaggtgaagagggagcaatagttgaagacttatttgacaagatacaagagcaagaacaaaacaatgaagaagaagtttcatca 18413068  T
Q  160 atataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatg--agagagagcgtnnnnnnntagg 257  Q
    |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||  |||||| |||        || |    
T  18413067 atataatttttaaatcgacttaaaataatgaaaaagatgtgcacaatatttagaaaattgacaattgtttgttatgaaagagagcgcgcaaaaaaataag 18412968  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttatt 328  Q
    ||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  18412967 aattttttaaagaaaaagataataactgacaattgtttgttacgagagaaagataatatattaaatttatt 18412897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 1 - 451
Target Start/End: Complemental strand, 8544596 - 8544134
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| ||||||||||| |||  ||||||||| ||||| |||       |||||||||||||| |  |||||||||||||||||||| ||  |||||    
T  8544596 ttgagagaagaaaaataaaatacttcatgaatgttcaaaaggaagaaagag-tggaagactcgttgaaactgctgatgagaggtgaagagagataaatag 8544498  T
Q  101 ttgaagactcatttgacaagatacaagaacaaga------tgacaatgaagaagaa--atttcatcaatataatttttatattg-------acttaaaat 185  Q
    |||||||||  |||||||||||| ||||||||||      ||||||||||||||||  | || |     |||||| ||||||||       | |||||||    
T  8544497 ttgaagacttgtttgacaagatagaagaacaagaacaaggtgacaatgaagaagaagaagttgaa----ataattgttatattgcttaaaaatttaaaat 8544402  T
Q  186 aattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnnta-ggaatttattggagaaaaagataataact 284  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |         | ||||||| ||||||||||||||||||| |    
T  8544401 aattaaaaagatgtgcacaatatttagaaaattgacaattgtttgatatgagagagagtgggcaaaaaaatggaatttgttggagaaaaagataataatt 8544302  T
Q  285 gacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgaggg 383  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||| |||| ||||||||        || |||||||| |||||||||||||||||    
T  8544301 gacaattgtttcttacgagagaaagataacatattaaatttattggaaatataaggtgtgtgcaaaaaatcaggaatttattggtggattaaaatgaggg 8544202  T
Q  384 tataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||| |||||||| |||||||||||||||| | |  |||| |||||||||| | ||||| |||||    
T  8544201 tataatatgaagaaaatgtgcaaaaatacacattgttaatttggtgttaattttttgaaaaggcactt 8544134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 19804079 - 19804375
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag------cgtnnnnnnnta 255  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||  |||||||||||      ||        ||    
T  19804079 ataatttttatattgacttaaaataattaaaaaaatgtttacaatatttagaaaattgacaattgtttgtaatgagagagagagagagcgcaaaaaaata 19804178  T
Q  256 ggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnt 355  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |       |    
T  19804179 ggaatttgttggagaaaaagataatagctgacaattatttgttaccagagaaatataacatattaaatttgttggaaagataaagtgtgtacaaaaaaat 19804278  T
Q  356 agaaattta-ttgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |  |||||| |||| |||||||||||||||| ||||||||||||| || ||||||||||||| |||  |||  ||||||||||||||||||||||||    
T  19804279 aagaatttatttgtcgattaaaatgagggtagaataggaagaaaatgtacaaaaatacacattgctaatttagtgttaattttctaaaaagacactt 19804375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 1583832 - 1584128
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag----cgtnnnnnnntagg 257  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||  |||||| ||||||||||| |||||||||| |    ||        ||||    
T  1583832 ataattttgatattgatttaaaataatttaaaagatgtgcacaatatttcaaaaattgacaattgtttgttatgagagagcgagcgcgcaaaaaaatagg 1583931  T
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||| ||||||||| ||||||||||||||||||       |||    
T  1583932 aatttattggagaaaaagataataacggacaattgtttgttatgagagaaatacaac-tatgaaatttattagaaagataaagtgtgtgcaaaaaaatag 1584030  T
Q  358 aaatttatt-gtggatta---aaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     |||||||| ||||||||   |||||  |||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||| |||||||| ||||    
T  1584031 gaatttattggtggattaattaaatggtggtataataggaagaaaatgtgcaaaaatacacatcgctaatttgatgtttattttttaaaaagatactt 1584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 17201641 - 17201870
Alignment:
Q  10 gaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagact 109  Q
    ||||| |||||||||| ||||||||||||| |||||       |||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||    
T  17201641 gaaaattaaaagactccatgaatgtttaaa-gaaagaaaaag-tggaagactcgttgaaattgttgatgagaggtgaagagagagcaatagttgaagact 17201738  T
Q  110 catttgacaagatacaagaacaag------------atgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagat 197  Q
    ||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17201739 catttgacaagatacaagaacaagaacatgatcaagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaaggt 17201838  T
Q  198 gtgcacaatatttagaaaattaacaattgttt 229  Q
    | |||||||||||| |||||| ||||||||||    
T  17201839 gcgcacaatatttaaaaaattgacaattgttt 17201870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 39585719 - 39585469
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatag 100  Q
    |||||||| |||||||||||||||| || |||||| ||||| |||       |||||||||| ||| |  ||||||||| ||||||||||||||||||||    
T  39585719 ttgagagaagaaaaataaaagactccattaatgttcaaaaggaagaaaaag-tggaagactcattgaaactgctgatgaaaggtgaagagggagcaatag 39585621  T
Q  101 ttgaagactcatttgacaagatacaagaacaa------gatgacaatgaagaagaaattt---catcaatataatttttatattgacttaaaataattaa 191  Q
    ||||||||| |||||  || ||||||||||||      ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||    
T  39585620 ttgaagacttatttggtaaaatacaagaacaataacaagatgacaatgaagaagaaattttttcatcaatataatttttatattgacttaaaataactaa 39585521  T
Q  192 aaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |||||| ||||||||||||||||||||||||| |||||| ||||||||||||    
T  39585520 aaagatatgcacaatatttagaaaattaacaaatgtttgttatgagagagag 39585469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 264 - 451
Target Start/End: Complemental strand, 17202071 - 17201883
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt 363  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||        ||| |||||    
T  17202071 ttggagaataagatcataactgacaatcgtttgttacgagagaaaaataacatattaaatttattggaaagataaagtttgtgtaaaaaaataggaattt 17201972  T
Q  364 attg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17201971 attggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctatttttatgttaattttctaaaaagacactt 17201883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 162 - 420
Target Start/End: Complemental strand, 11991977 - 11991716
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagc--gtnnnnnnntaggaa 259  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||| |||||||||||||  ||       | ||||    
T  11991977 ataatttttatattgacttaaaataattaaaaatatgtgcacagtatttaggaaattgacaattgtttgttatgagagagagcgtgtaaaaaaattggaa 11991878  T
Q  260 tttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta-ga 358  Q
    ||| ||| || ||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||| |||| ||||||| |||||        | ||    
T  11991877 ttttttgaagtaaaagataatatctgacaattgtttgttacaagagaaagataacatattaaatttattagaaatataaagtttgtgcaaaaaaacatga 11991778  T
Q  359 aatttattgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgct 420  Q
    | ||| | || ||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  11991777 attttttggtagattaaaatgaaggtatattaggaagaaaatgtgcaaaaatacacatcgct 11991716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 186 - 451
Target Start/End: Original strand, 6428435 - 6428700
Alignment:
Q  186 aattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag--cgtnnnnnnn-taggaatttattggagaaaaagataataa 282  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||   ||         ||||||||| ||| ||||   ||||||||    
T  6428435 aattaaaaagatatgcacattatttagaaaattgacaattgtttgttatgagagagactacgaaaaaaatataggaatttgttgcagaa---gataataa 6428531  T
Q  283 ctgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgag 381  Q
    || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||       ||| || ||||| ||||||||||||||     
T  6428532 ct-acaattgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtgcaaaaaaataggaacttattggtggattaaaatgaa 6428630  T
Q  382 ggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||| ||||||| ||||||||||||||||| || ||||| |||||||||||| |||||||||||    
T  6428631 ggtataatagaaagaaaatgtgcaaaaatacacatcactattttggtgttaattttcttaaaagacactt 6428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 284 - 451
Target Start/End: Original strand, 28620495 - 28620660
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgaggg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||       ||| || |||| | |||||||||||||||    
T  28620495 tgacaattgtttgttacgagagaaatataacttattaaatttattgaaaagataaggtgtgtgcaaaaaaataggaacttatggcggattaaaatgaggg 28620594  T
Q  384 tataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||| |||||||||||||||||| | |||   ||||||||||||||||||||||||    
T  28620595 tataataggaagaaaaggtgcaaaaatacacatcgttattt--gtgttaattttctaaaaagacactt 28620660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 258 - 451
Target Start/End: Original strand, 32474594 - 32474787
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||| | ||| ||||| |||||||||||||||||||||||||||| |||       ||     
T  32474594 aatttgttgaagaaaaagataataactgacaattgtttattacgata-aaagataacatattaaatttattggaaagataaagtgtttgcgaaaaaatat 32474692  T
Q  358 aaatttattgt-ggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||| ||||||||| |||||| ||||    
T  32474693 gaatttattgttggattaaaatgagggtataatagaaagaaaatgtgcaaaaatacaaatcgctattttgatggtaattttcttaaaagatactt 32474787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 280 - 451
Target Start/End: Original strand, 1584147 - 1584315
Alignment:
Q  280 taactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaat 378  Q
    ||||||| |||||||||||||||||||||    || ||||||||||||||||||||||||||||||||       ||||||||||| | |||||||||||    
T  1584147 taactgaaaattgtttgttacgagagaaa----acgtattaaatttattggaaagataaagtgtgtgcagaaaaatagaaatttatcggtggattaaaat 1584242  T
Q  379 gagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  |||| |||||||||| |||||||||||||    
T  1584243 gagggtataatagaaagaaaatgtgcaaaaatacacatcgctaatttggtgttaattttttaaaaagacactt 1584315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 28620289 - 28620517
Alignment:
Q  11 aaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactc 110  Q
    |||||||||||| || |||||||||||||||||||       | ||| ||||||||||  || ||||||||||||||||| ||| |||| ||||| ||||    
T  28620289 aaaaataaaagattccatgaatgtttaaaagaaagtaaaag-tagaatactcgttggaactgttgatgagaggtgaagagagagaaataattgaaaactc 28620387  T
Q  111 atttgacaagatacaagaacaaga------tgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcaca 204  Q
    |||||| |||||||||||||||||      |||||| ||||||||| ||  |     ||||||||||||||||||||||||||||||||| || ||||||    
T  28620388 atttgataagatacaagaacaagagcaagatgacaacgaagaagaagttgga-----ataatttttatattgacttaaaataattaaaaa-atatgcaca 28620481  T
Q  205 atatttagaaaattaacaattgtttggtatgagaga 240  Q
    ||||||| |||||| ||||||||||| || ||||||    
T  28620482 atatttaaaaaattgacaattgtttgttacgagaga 28620517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 39585451 - 39585358
Alignment:
Q  359 aatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  39585451 aatttattgatggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacgtcgctattttggtgttaattttctaaaaagacactt 39585358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 17201468 - 17201597
Alignment:
Q  4 agagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttg 103  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||       |||||||||||||| | ||||||||||||||| |||||  |||||||||||    
T  17201468 agagaagaaaattaaaagactccatgaatgttcaaaagaaagaaaaag-tggaagactcgttgaaattgctgatgagaggtcaagagatagcaatagttg 17201566  T
Q  104 aagactcatttgacaagatacaagaacaaga 134  Q
    |||||||||||||||||||||||||||||||    
T  17201567 aagactcatttgacaagatacaagaacaaga 17201597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 410
Target Start/End: Complemental strand, 39940313 - 39940167
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt 363  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||| ||||  ||||||||||||||||||||| |||||||||        ||| |||||    
T  39940313 ttggagaaaaagttaataacggacaatagtttgttatgagagaaaaataaaatattaaatttattggaaagatcaagtgtgtg-aaaaaaataggaattt 39940215  T
Q  364 att-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaat 410  Q
    ||| ||||||||||||||||||||||||||||||||| || |||||||    
T  39940214 attggtggattaaaatgagggtataataggaagaaaatgtacaaaaat 39940167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 433
Target Start/End: Complemental strand, 25612915 - 25612737
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| |||||||||||||||||||||  | ||||||| |||||||||||| ||||| |||||||||||||  |||||| ||| ||||||          
T  25612915 taggaatttgttggagaaaaagataataactagcgattgtttcttacgagagaaagataacatattaaatttattctaaagatgaagcgtgtgcaaaaaa 25612816  T
Q  354 ntagaaatttattgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaa 433  Q
       ||| | | |  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  25612815 aatgaattatctaatggatt-aaatgagggtataataggaagaaaatgtgcaaaaatacacatcgctaatttggtgttaa 25612737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 451
Target Start/End: Complemental strand, 249057 - 248901
Alignment:
Q  294 ttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataatagg 392  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||||||  |       |||| || | || |||||||||| |||||||||||||||    
T  249057 ttgttacgagaaaaatataacatattaaattttttggaaagataaagtgtg--ccaaaaaatagagatatgttagtggattaaattgagggtataatagg 248960  T
Q  393 aagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||| ||| |||||||||| | ||| |||| |||  |||||||||||| |||||||    
T  248959 aagaaaatgtgtaaaaatacactttgctatttttatggaaattttctaaaacgacactt 248901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 36437155 - 36437075
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga 134  Q
    |||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||    
T  36437155 tggaaggctcgttggaattgctgatgagaggtgaagatgaagcaatagttgaagactcattcgacaaga-acaagaacaaga 36437075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 249331 - 249155
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa-----gatgacaatgaagaa 147  Q
    |||||||||| |||||  |||| |||  ||||||| |||||| | |||||||| | || |||||||| ||||||||| ||     |||||| ||||||||    
T  249331 tggaagactcattggaactgctcatggaaggtgaaaagggagaagtagttgaaaattcgtttgacaatatacaagaaaaaaataagatgacgatgaagaa 249232  T
Q  148 g---aaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgc---acaatatttagaaaatta 219  Q
    |   || |||||||||||||| ||||||||||||||||| |||||||| ||||||||   ||||||||||||||||||    
T  249231 gaataagtttcatcaatataa-ttttatattgacttaaattaattaaagagatgtgctcaacaatatttagaaaatta 249155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 451
Target Start/End: Original strand, 37270031 - 37270191
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataat 389  Q
    ||||||||| |||| ||||||||| ||||||||||||| ||| ||||||||||| ||       || | || |||| |||||||||| |||||||||| |    
T  37270031 tgtttgttatgagaaaaatataacatattaaatttattagaatgataaagtgtgagcaaaaaa-tatagatatattagtggattaaattgagggtatagt 37270129  T
Q  390 aggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||| |||||||||||||| | ||| ||||  ||  |||||||||||| |||||||    
T  37270130 aggaagaaaatgtgcaaaaatacactttgctatttttgtggaaattttctaaaacgacactt 37270191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 36059692 - 36059557
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacaca 415  Q
    ||||||||||||||||||||||||||||||||         ||||||  | |||||||||||||||||||||||||||| |||| ||| ||||||||||     
T  36059692 tattaaatttattggaaagataaagtgtgtgcaaaaaataggaaattattagtggattaaaatgagggtataataggaaaaaaatgtgaaaaaatacact 36059593  T
Q  416 tcgctgttttgatgttaattttctaaaaagacactt 451  Q
    || || ||||  ||||||  |||||||  |||||||    
T  36059592 tcactatttttgtgttaaaattctaaatcgacactt 36059557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 20202164 - 20202300
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||||||||| |||||||||||||||||       ||  || ||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  20202164 tattaaatttattgaaaagataaagtgtgtgcaaaaaaatatgaaattattagtgaattaaaatgagggtataataggaaaaaaatgtgcaaaaatacac 20202263  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
     | ||| ||||  ||||||  || ||||| |||||||    
T  20202264 ttagctatttttgtgttaaaattttaaaacgacactt 20202300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 451
Target Start/End: Complemental strand, 11825354 - 11825184
Alignment:
Q  284 tgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagg 382  Q
    |||||||||||| ||| |||| ||| ||||| ||||||||||||||  |||||||||| |||||       ||  ||| |||| |||||||| | |||||    
T  11825354 tgacaattgttttttatgagataaaaataacatattaaatttattgagaagataaagtatgtgccaaaaaataagaatatatttgtggattacattgagg 11825255  T
Q  383 gtataataggaag--aaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||  ||||  ||| ||||||||| ||||| ||||  | |||||||||||||| |||||||    
T  11825254 gtataataggaagaaaaaaaatgctaaaatacacttcgctatttttgtattaattttctaaaacgacactt 11825184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 443
Target Start/End: Complemental strand, 13219996 - 13219817
Alignment:
Q  268 agaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattgg--aaagataaagtgtgtgcnnnnnnntagaaatttat 365  Q
    |||||| |||||||| | |||||||||||||| || | ||| ||||| |||||||||||||||  ||| |||||||||||||       ||||||| |||    
T  13219996 agaaaaggataataattcacaattgtttgttatgataaaaagataacatattaaatttattggaaaaaaataaagtgtgtgcaaaaaaatagaaatatat 13219897  T
Q  366 t-gtggattaaaatgagggtataatag--gaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    | ||||||| |||||||||||| ||||  ||| || | ||||||||||||| |||  |  |||| ||||||||||||||||    
T  13219896 tggtggatt-aaatgagggtatgatagaagaaaaagatgtgcaaaaatacatatcattaatttggtgttaattttctaaaa 13219817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 19133323 - 19133254
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| | |||| |||| ||| ||||||||    
T  19133323 attgacttaaa-taattaaagagatgtgcacaatatttagaaaattgaaaattatttgttattagagagag 19133254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 20202006 - 20202080
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatga 236  Q
    |||||||| |||| ||||||||||||||||  | || |||||||||||||||||||| | ||||||||| |||||    
T  20202006 ataattttgatatagacttaaaataattaatgatatatgcacaatatttagaaaattgaaaattgtttgttatga 20202080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 17200377 - 17200429
Alignment:
Q  80 gaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    |||||||||| |||| ||||||||||||||| |||||||||||| ||||||||    
T  17200377 gaggtgaagaaggagaaatagttgaagactcgtttgacaagatagaagaacaa 17200429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 391
Target Start/End: Original strand, 14967816 - 14967928
Alignment:
Q  280 taactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaat 378  Q
    ||||| |||||||||||||| |||||||| |||||  |||||||||||| |||||| ||| ||||||        || ||||||||| ||||||||||||    
T  14967816 taactaacaattgtttgttatgagagaaaaataacacattaaatttattcgaaagaaaaaatgtgtgtaaaaaaatataaatttattggtggattaaaat 14967915  T
Q  379 gagggtataatag 391  Q
     || |||||||||    
T  14967916 tagagtataatag 14967928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 17200502 - 17200577
Alignment:
Q  270 aaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgt 345  Q
    ||||||||| ||| | |||| |||||||||||| ||||| ||||| ||||| ||||||| |||||| |||||||||    
T  17200502 aaaaagatagtaattaacaaatgtttgttacgaaagaaagataacatattatatttattagaaagagaaagtgtgt 17200577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 17201602 - 17201640
Alignment:
Q  127 gaacaagatgacaatgaagaagaaatttcatcaatataa 165  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17201602 gaacaagatgacaatgaagaagaagtttcatcaatataa 17201640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 32474523 - 32474564
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgtt 298  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  32474523 gaatttgttggagaaaaagataataagtgacaattgtttgtt 32474564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 36244596 - 36244539
Alignment:
Q  355 tagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaata 411  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||| |||||||||||    
T  36244596 tagaaatttattggtggattaaaataagagtataatagaaagaaaatgtgcaaaaata 36244539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 17558349 - 17558433
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||||||||| ||||||||||| ||   ||| |||||||||| ||||| ||||  ||||||  |||||||| |||||||    
T  17558349 gtggattaaaatgaggatataataggaaaaatgtgtgtaaaaatacacttcgctatttttgtgttaaaattctaaaacgacactt 17558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 451
Target Start/End: Complemental strand, 32717692 - 32717609
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| |||||||||||||||||| |||  |||| ||||||||| ||||| ||||  ||||||  |||||||| |||||||    
T  32717692 gtggattaacatgagggtataataggaaaaaagtgtgc-aaaatacacttcgctatttttgtgttaaaattctaaaacgacactt 32717609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 16366046 - 16366182
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||||||||||||||||||||||||||||| ||       ||  || ||||| |  ||||||||||||||||||||||||| |||   |||||||||||||    
T  16366046 tattaaatttattggaaagataaagtgtgcgcaaaaatatatgaaattattagaagattaaaatgagggtataataggaaaaaagtttgcaaaaatacac 16366145  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
     || || ||||  ||||||  |||| ||| |||||||    
T  16366146 ttcactatttttgtgttaaaattcttaaacgacactt 16366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 14655194 - 14655240
Alignment:
Q  194 agatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||||    
T  14655194 agatatgcacaatatttagaaaattgaaaattgtttgttatgagaga 14655240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 36059819 - 36059763
Alignment:
Q  184 ataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    ||||||||| |||| || ||||||||||||||| ||| ||||||||  |||||||||    
T  36059819 ataattaaagagatatgtacaatatttagaaaactaaaaattgtttcctatgagaga 36059763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 8e-96; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 4 - 451
Target Start/End: Original strand, 25056731 - 25057179
Alignment:
Q  4 agagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttg 103  Q
    ||||| |||||||||||||||| ||||||||| ||| |||||       || ||||||||||| | ||| |||||||||||||||||| |||||||||||    
T  25056731 agagaagaaaaataaaagactccatgaatgttcaaaggaaagaaaaagttg-aagactcgttgaaattgttgatgagaggtgaagaggaagcaatagttg 25056829  T
Q  104 aagactcatttgacaagatacaagaacaagatgacaatgaagaagaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcac 203  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  25056830 aagactcatttgataagatacaagaacaagatgacaatgaataagaagtttcatcaatataatttttatattgacttaaaataattaaaaatgtgtgcat 25056929  T
Q  204 aatatttagaaaattaacaattgtttggtat--gagagagagcgtnnnnnnnta-ggaatttattggagaaaaagataataactgacaattgtttgttac 300  Q
    |||||||| |||||| ||||||| ||| |||  |||||||| ||         | ||||||| || |||||||| ||||||||  |||| |||||||||     
T  25056930 aatatttaaaaaattgacaattgcttgttataagagagagaacgaaaaaaaaaacggaatttgttagagaaaaatataataac-cacaactgtttgttat 25057028  T
Q  301 gagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaa 399  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||        || ||||||||| ||||||||| ||| ||||||||||||||||||    
T  25057029 gagagaaagataacacattaaatttattggaaagataaagtgtgtgcaaaaaataag-aatttattgatggattaaattgaaggtataataggaagaaaa 25057127  T
Q  400 cgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
     ||  |||||||| ||||| | |||||||||||||||| |||||||||||||    
T  25057128 tgtataaaaatacccatcgttattttgatgttaattttttaaaaagacactt 25057179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 53 - 408
Target Start/End: Complemental strand, 2437639 - 2437273
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------tgacaatgaaga 146  Q
    ||||||| |||||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||      ||||||||||||    
T  2437639 tggaagattcgttggaatttctgatgagaggtgaagaaggagaaatagttgaagactcatttgacaagatacaagaacaggaacaggatgacaatgaaga 2437540  T
Q  147 ---agaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
       |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||    
T  2437539 agaagaagtttcatcaatataatttttatattgacttaaaataattaaaaagatttgcacaatatttagaaaattgacaattgtttgttataagagagag 2437440  T
Q  244 cg-tnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtg 342  Q
    ||         ||  ||||| ||| ||||||||||||||| ||||||| |||||||| |||||| | ||||| |||||||||||||||||||||||||||    
T  2437439 cgcgcaaaaaataaaaatttgttgaagaaaaagataataattgacaatagtttgttatgagagatagataacatattaaatttattggaaagataaagtg 2437340  T
Q  343 tgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaa 408  Q
    |||||       ||| |||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  2437339 tgtgcaaaaaaataggaatttattggtggattaaaatgatggtataataggaagaaaatgtgcaaaa 2437273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 53 - 339
Target Start/End: Original strand, 8049457 - 8049757
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------tgacaatgaaga 146  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||      |||||||||| |    
T  8049457 tggaagactcgttggaattgttgatgagaggtgaagagggaacaatagttgaatactcatttgacaagatacaagaacaagaataagatgacaatgaata 8049556  T
Q  147 agaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatattt-agaaaattaacaattgtttggtatgagagagagcg 245  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||| |||||||||||| |    
T  8049557 agaagtttcatcaatataatttttatattgacttaaaataattaaaaagaggtgcacaatatttaaaaaaattgacaattgtttgttatgagagagagag 8049656  T
Q  246 -------tnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataa 338  Q
                   || |||||| |||||||||||||||||||   |||||||||||||| |||||||| ||||| |||||||||||||||||| ||||    
T  8049657 agcacacaaaaaaaatatgaatttgttggagaaaaagataataagcaacaattgtttgttatgagagaaagataacatattaaatttattggaaatataa 8049756  T
Q  339 a 339  Q
    |    
T  8049757 a 8049757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 258 - 443
Target Start/End: Complemental strand, 14093409 - 14093223
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntag 357  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||| ||||||||||||||       |||    
T  14093409 aatttgttgtagaaaaagataataaccgacaattgtttgttacgagagaaagatgacatattaaatttattggaaggataaagtgtgtgcaaaaaaatag 14093310  T
Q  358 aaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    || ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||  |||| |||||| |||||||||    
T  14093309 aagtttattgatggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacattgctaatttggtgttaactttctaaaa 14093223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 9353388 - 9353556
Alignment:
Q  76 atgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagatgacaatgaagaagaa-atttcatcaatataatttttatat 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |     |  | |||||||||| ||    
T  9353388 atgagaggtgaagagggagaaatagttgaagactcatttgacaagatacaagaacaagataacaatgaagaagaagaagaagttgaaataatttttacat 9353487  T
Q  175 tgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
     ||| ||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||    
T  9353488 cgacgtaaaataattaaaaaaatatgcacaatatttagaaaattgacaattgtttgatatgagagagag 9353556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 8049786 - 8049973
Alignment:
Q  265 tggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaa--att 362  Q
    |||||||||||||||||| | |||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||        | ||  |||    
T  8049786 tggagaaaaagataataagtaacaattgtttgttatgagagaaagataacatattaaatttattggaaatataaagtgtgtgcaaaaaaaaataagaatt 8049885  T
Q  363 tattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacac 449  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||| |||||||||||    
T  8049886 tattggtggatcaaaatgagggtataataggaagaaaatgtgcaaaaacacacatcgctattttggtgttaattttttaaaaagacac 8049973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 14093572 - 14093414
Alignment:
Q  55 gaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatac------aagaacaagatgacaatgaagaag 148  Q
    |||||||| |||||  || ||||||||||||||||||||| |||||||||| ||||||||| ||||||||      ||||||||||||||||||||||||    
T  14093572 gaagactcattggaactgatgatgagaggtgaagagggagaaatagttgaa-actcatttgtcaagatacgagaacaagaacaagatgacaatgaagaag 14093474  T
Q  149 aa--atttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatt 209  Q
    ||  | || |  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14093473 aagaagttga--aata-aatttttatattgacttaaaataattaaaaagatgtgcacaatatt 14093414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 255 - 411
Target Start/End: Original strand, 23410950 - 23411107
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnn 354  Q
    |||||||| ||||||||||||||| ||||| | || | |||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||           
T  23410950 aggaatttgttggagaaaaagatagtaactaagaaatatttgttacgagagaaagataacatattaaatttattggaaagagaaagtgtatgcaaaaaaa 23411049  T
Q  355 tagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaata 411  Q
    ||| ||| |||| |||||||||||||||||||||||||||  |||| |||||||||||    
T  23411050 taggaatatattggtggattaaaatgagggtataataggatcaaaaagtgcaaaaata 23411107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 451
Target Start/End: Complemental strand, 26252174 - 26252014
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattgtggattaaaatgagggtataata 390  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||       |||| || |||||  ||||||| |||||||||||||    
T  26252174 tgtttgttacgagaaaaatataacatattaaatttattagaaagataaagtgtgtgccaaaaaatagagatatattggtgattaaattgagggtataata 26252075  T
Q  391 ggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| || ||||||||||| |  || |||| |||  |||||||||||| |||||||    
T  26252074 ggaagaaaatgtacaaaaatacactttactattttcatggaaattttctaaaacgacactt 26252014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 4666180 - 4666258
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||| |||| ||||||||||||||||| |||| ||||||||||||| |||||| | ||||||||| |||||||||    
T  4666180 ataattttgatatagacttaaaataattaaagagatatgcacaatatttaaaaaattgaaaattgtttgttatgagaga 4666258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 425
Target Start/End: Complemental strand, 21527061 - 21526951
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||||||||| |||||||||||||||||       ||| || ||||| |||||||||||||||||| ||||||||| |||  ||||||||||||||    
T  21527061 tattaaatttattgaaaagataaagtgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtgtaataggaaaaaagtgtgcaaaaatacac 21526962  T
Q  415 atcgctgtttt 425  Q
     ||||| ||||    
T  21526961 ttcgctatttt 21526951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 316 - 443
Target Start/End: Complemental strand, 7972399 - 7972271
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    |||||||||||||||||||||||| |||||||       ||| || ||||| ||||||||||||||||||||||||| || |||  ||||||||||||||    
T  7972399 tattaaatttattggaaagataaaatgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtataatagaaaaaaagtgtgcaaaaatacac 7972300  T
Q  415 atcgctgttttgatgttaattttctaaaa 443  Q
     ||| | ||||  ||||||  ||||||||    
T  7972299 ttcgttatttttgtgttaaaattctaaaa 7972271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 399
Target Start/End: Original strand, 31660870 - 31661013
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnta 356  Q
    |||||| ||| ||||||||| | ||||| || |||||||| || |||||||| |||||  ||||||||||||||||||| ||||||||| |       ||    
T  31660870 gaatttgttgaagaaaaagagagtaactaacgattgtttgctatgagagaaagataacacattaaatttattggaaagagaaagtgtgtccagaaagata 31660969  T
Q  357 gaaatttatt-gtggattaaaatgagggtataataggaagaaaa 399  Q
    | |||  ||| || ||||||||||| ||||||||||||||||||    
T  31660970 ggaatcaattggtagattaaaatgaaggtataataggaagaaaa 31661013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 6026570 - 6026654
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||||||||| ||||||||| ||||||| ||||||| |||||| | ||| ||||  ||||||| |||||||| |||||||    
T  6026570 gtggattaaaatgagagtataatagaaagaaaaagtgcaaacatacactttgctatttttgtgttaatattctaaaacgacactt 6026654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 13871757 - 13871698
Alignment:
Q  56 aagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttga 116  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||    
T  13871757 aagactcgttggaat-gctgatgagaggtgaagagggagaaatagttgaagtctcatttga 13871698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 26252390 - 26252287
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaac------aagatgacaatgaaga 146  Q
    ||||||||| |||||| || ||||||  || ||||||||||| | ||||||||||||  |||||||||||||||||||      ||||||||||||||||    
T  26252390 tggaagactagttggaattactgatggaagatgaagagggagaagtagttgaagacttgtttgacaagatacaagaacaaaaataagatgacaatgaaga 26252291  T
Q  147 agaa 150  Q
    ||||    
T  26252290 agaa 26252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 4184970 - 4185048
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||||||| |||| ||||||||||||||||| | || |||| |||||||| |||||| | ||||||||| |||||||||    
T  4184970 ataattttgatatagacttaaaataattaaagaaatatgcataatatttaaaaaattgaaaattgtttgttatgagaga 4185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 280 - 414
Target Start/End: Complemental strand, 6110800 - 6110665
Alignment:
Q  280 taactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaat 378  Q
    ||||| ||||||||||||||| ||||||| || || |||||||||||||| |||   |||||||||||       ||  |||| ||| ||||||||||||    
T  6110800 taactaacaattgtttgttacaagagaaagatgacatattaaatttattgaaaacggaaagtgtgtgcaagaaaataataattcattagtggattaaaat 6110701  T
Q  379 gagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||  ||||||||| ||||||| ||| ||||||||||    
T  6110700 gaaagtataatagaaagaaaatgtgtaaaaatacac 6110665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 14093024 - 14093077
Alignment:
Q  261 ttattggagaaaaagataataactgacaattgtttgttacgagagaaatataac 314  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  14093024 ttattagagaaaaagataataactggcaattgtttattacgagagaaagataac 14093077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 8461228 - 8461309
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagaca 448  Q
    |||||||||||| |||||| || ||||| |||| || ||||||||||| | ||| |||| |||||||| |||||||| ||||    
T  8461228 gtggattaaaattagggtaaaacaggaaaaaaatgtacaaaaatacactttgctatttttatgttaatattctaaaatgaca 8461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 23410853 - 23410931
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga 242  Q
    |||||||| ||||| |||| || |||||||| |||||||||  ||||||| || ||| ||||||||||| |||||||||||    
T  23410853 ataattttgatattaacttcaattaattaaagagatgtgca--atatttaaaatattgacaattgtttgctatgagagaga 23410931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 4123128 - 4123175
Alignment:
Q  288 aattgtttgttacgagagaaatataacttattaaatttattggaaaga 335  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||    
T  4123128 aattgtttgttatgagagaaagataacacattaaatttattggaaaga 4123175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 444
Target Start/End: Complemental strand, 34132077 - 34131988
Alignment:
Q  355 tagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaa 444  Q
    |||||||||||| |||||||||||| | |||| ||||||||||||| |  |||||| || |||| || ||||  |||||||||||||||||    
T  34132077 tagaaatttattagtggattaaaataatggtaaaataggaagaaaatg-acaaaaaaacgcatctctatttttgtgttaattttctaaaaa 34131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 6110895 - 6110824
Alignment:
Q  167 ttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagag 239  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||  |||||| | |||| ||||  |||||||    
T  6110895 ttttaaattgacttaaa-taattaaagagatgtgcacaatattttaaaaattgaaaattatttgtaatgagag 6110824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 13871682 - 13871650
Alignment:
Q  186 aattaaaaagatgtgcacaatatttagaaaatt 218  Q
    |||||||||||| ||||||||||||||||||||    
T  13871682 aattaaaaagatttgcacaatatttagaaaatt 13871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 31656042 - 31656086
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaaga 335  Q
    ||||||||| ||||||||||||||  ||||||||||||| |||||    
T  31656042 tgtttgttatgagagaaatataacacattaaatttattgaaaaga 31656086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 8e-90; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 63 - 451
Target Start/End: Original strand, 32233907 - 32234304
Alignment:
Q  63 gttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaaga------tgacaatgaagaa---gaaatt 153  Q
    |||||| |||||  ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||      |||||||||||||   ||| ||    
T  32233907 gttggaattgcttttgagaggtgaagatggaacaatagttgatgactcatttgacaagatacaagaacaagaacaagatgacaatgaagaaaaagaagtt 32234006  T
Q  154 tcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagaga--gcgtnnnnn 251  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||          
T  32234007 tcatcaatataatttttatattgaccgaaaataattaaaaagatgtgcacaatatttagaaaattgacaattgtttgttataagagagaatgcg-caaaa 32234105  T
Q  252 nntaggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnn 351  Q
      ||| ||||| || ||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||  ||| |||||  ||||||        
T  32234106 aatagaaatttgttagagaaaaagataaaaactaacaattgtttgttacgagagaaaaataacatattaaatttattaaaaaaataaa--gtgtgcaaaa 32234203  T
Q  352 nnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacact 450  Q
       ||| |||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  32234204 aaataggaatttattggtggattgaaatgagggtataataggaagaaaatgtacaaaaatacacatcgctattttgatgtaaattttctaaaaaaacact 32234303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 4 - 451
Target Start/End: Original strand, 5871007 - 5871456
Alignment:
Q  4 agagatgaaaaataaaagactctatgaatgtttaaaagaaagnnnnnnntggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttg 103  Q
    ||||| |||||||||||||||| ||||||||| ||||| |||       |||||||||| ||| |    ||||||||||||||||||| || |||||||     
T  5871007 agagaagaaaaataaaagactccatgaatgttcaaaaggaagaaataa-tggaagactcattgaaa---ctgatgagaggtgaagagg-agaaatagtta 5871101  T
Q  104 aagactcatttgacaagatacaagaacaagatgacaatgaagaagaa-atttcatcaatataatttttatattgacttaaaataattaaaaagatgtgca 202  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | ||  | || ||||||||||||||| |||||||||||||||||||||||||    
T  5871102 aagactcatttgacaagatacaagaacaagatgacaatgaagaataagaattgttgaa-ataatttttatattgccttaaaataattaaaaagatgtgca 5871200  T
Q  203 caatatttagaaaattaacaattgtttggtatgagagagagc--gtnnnnnnnta----ggaatttattggagaaaaagataataactgacaattgtttg 296  Q
    |||||||||||||||| ||||||||||  |||||||||||||  ||        |    ||||||| ||||||||||| ||||||| |||||||||||||    
T  5871201 caatatttagaaaattgacaattgtttcatatgagagagagctagtgaacaaaaaaattggaatttgttggagaaaaaaataataattgacaattgtttg 5871300  T
Q  297 ttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaag 395  Q
    |||| ||||||| ||||| ||||||||| |||||||| ||||| |||||||       ||| |||||||| |||||||||||||| ||||||||||||||    
T  5871301 ttacaagagaaaaataacatattaaattcattggaaaaataaaatgtgtgcgaaaaaataggaatttattggtggattaaaatgaaggtataataggaag 5871400  T
Q  396 aaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||| ||| ||||||| ||||||||  |||||| |||||||| |||||||||||||    
T  5871401 aaaatgtgtaaaaatatacatcgctaatttgatattaattttttaaaaagacactt 5871456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 71 - 414
Target Start/End: Original strand, 34146503 - 34146849
Alignment:
Q  71 tgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa------gatgacaatgaagaagaaatttcatcaatata 164  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||      |||||||||||||||||| ||  |     |||    
T  34146503 tgctgatgagaggtgaagggggagaaatagttgaagactcatttgacaagatacaagaacaaaaacaagatgacaatgaagaagaagttgaa-----ata 34146597  T
Q  165 atttttatattgactt-aaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaattta 263  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||| |        | | |||||     
T  34146598 atttttatattgactttaaaataattaaaaagatgtacacaatatttaaaaaattcacaattgtttgatatgagagagagagcaaaaaagttgaaatttg 34146697  T
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattt 363  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||| |||||||       ||  |||||    
T  34146698 ttggagaaaaagataataacagacaattgtttgttgcgaaagaaagataacatattaaatttattggaaagataaaatgtgtgcaaaaaaataagaattt 34146797  T
Q  364 att-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34146798 attggtggattaaaatgagggtataatagaaagaaaatgtgtaaaaatacac 34146849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 38401866 - 38402150
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatt 261  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||| |||  |||||||||        ||  ||||    
T  38401866 ataatttttatattgacttaaattaattaaaaagatgtgcacaatatttagaaagttgacaattgtttgttat--gagagagcgcaaaaaaatataaatt 38401963  T
Q  262 tattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaat 361  Q
    | |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |||||| |||||||||||||||||||||||||        || |||    
T  38401964 tgttggagaaaaagataataac-gacaattgtttgttatgagagaatgataacatattaagtttattggaaagataaagtgtgtgcaaaaattaag-aat 38402061  T
Q  362 ttat-tgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||  ||||||||||||||||||||||||| ||| ||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  38402062 ttatcggtggattaaaatgagggtataatagaaag-aaatgtgcaaaaatacacattgctattttgatgttaa-tttctaaaaagacactt 38402150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 164 - 451
Target Start/End: Original strand, 27232000 - 27232289
Alignment:
Q  164 aatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnn---taggaat 260  Q
    |||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||  ||          || ||||    
T  27232000 aatttttatatttacttaaactaattaaaaaggtatgcaaaatatttagaaaattaacaattgtttgttatgagagagaatgtgcaataacaataagaat 27232099  T
Q  261 ttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaa 360  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||| |||||||       ||| ||    
T  27232100 ttgttggagaaaaagataataactgacaattgtttgttacgagagaaagataacatattaaatttatttgaaagataaaatgtgtgcaaaaaactagtaa 27232199  T
Q  361 tttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||| || ||||||||||||||||||||  |||||||| || ||||| |||||||||||  ||||   ||||||||||||||| ||||||    
T  27232200 tttattggttgattaaaatgagggtataat--gaagaaaatgtacaaaagtacacatcgctaatttgggtttaattttctaaaaaaacactt 27232289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 173 - 434
Target Start/End: Original strand, 14896909 - 14897172
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnnta-ggaatttattggagaa 271  Q
    ||||||||||| ||||| || ||||||| ||||||||||||||||| ||||||||||| ||||||||| || ||        | ||||||| ||||||||    
T  14896909 attgacttaaattaattgaagagatgtgtacaatatttagaaaattgacaattgtttgttatgagagaaagtgtgcaaaaaaaaggaattttttggagaa 14897008  T
Q  272 aaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtgg 370  Q
    |||||||  |||| |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||       ||  ||| |||| ||||    
T  14897009 aaagataggaactaacaaatgtttgttacgagagaaatataacatattaaatttattgaaaagagaaagcgtgtgcaagaaaataagaatatattggtgg 14897108  T
Q  371 attaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaat 434  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||| ||||| |||||||||||||    
T  14897109 attaaaatgagggcataatagaaagaaaatgtgcaaaaatacacttcgctcttttgatgttaat 14897172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 268 - 447
Target Start/End: Complemental strand, 7695083 - 7694903
Alignment:
Q  268 agaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattta-tt 366  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||       ||| |||||| ||    
T  7695083 agaaaaaggtaataactgacaattgtttgttacaagagaaagataacatattaaatttattgaaaagataaagtgtgtgcaaaaaaataggaatttattt 7694984  T
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagac 447  Q
    || ||||||||||||| |||||||||||||||| ||||||||| ||| || | |  |||  |||||||||| |||||||||    
T  7694983 gtagattaaaatgaggatataataggaagaaaatgtgcaaaaacacatattgttaatttagtgttaattttttaaaaagac 7694903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 29315649 - 29315478
Alignment:
Q  81 aggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa------gatgacaatgaaga---agaaatttcatcaatataattttta 171  Q
    |||||||||||||| | |||||||||| || |||||||| |||||| |||||      ||||||||||||||   |||| ||||||||||||||||||||    
T  29315649 aggtgaagagggagaagtagttgaagattcgtttgacaatatacaaaaacaaaaataagatgacaatgaagaagaagaagtttcatcaatataattttta 29315550  T
Q  172 tattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |||||| ||||| |||||||| |||||||||| ||||||| |||||| ||||||||||| ||||||||||||    
T  29315549 tattgagttaaattaattaaagagatgtgcacgatatttaaaaaattgacaattgtttgttatgagagagag 29315478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 53 - 243
Target Start/End: Original strand, 36682822 - 36683021
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaa------caagatgacaatgaaga 146  Q
    |||||||||| |||||  |||| |||  ||||||||| |||| | |||| ||||| || |||||||| |||||||||      |||| ||| ||||||||    
T  36682822 tggaagactcattggaactgctaatggaaggtgaagaaggagaagtagtcgaagattcgtttgacaatatacaagaaaaaaaacaaggtgaaaatgaaga 36682921  T
Q  147 a---gaaatttcatcaatataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagag 243  Q
    |   ||| ||||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  36682922 ataagaagtttcatccatataatttttatattgacttaaattaattaaagagatgtgcgcaatatttagaaaattaacaattgtttgttatgagagagag 36683021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 162 - 400
Target Start/End: Original strand, 11087484 - 11087728
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtat------gagagagagcgtnnnnnnnta 255  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||      ||||||| |||         |    
T  11087484 ataatttttatattgatttaaaataattaaaaagatgtgcacaatatttaaaaaattgacaattgtttgttatgagtgagagagagtgcgcataaaaaaa 11087583  T
Q  256 ggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnnt 355  Q
     |||||| ||||||||||||||| ||||||||||||||||||||  ||||||| ||||| | |||||||||||  ||||||||| ||| ||        |    
T  11087584 tgaatttgttggagaaaaagatagtaactgacaattgtttgttataagagaaagataacatgttaaatttattaaaaagataaaatgtatg-aaaaaaat 11087682  T
Q  356 agaaatttatt-gtggattaaaatgagggtataataggaagaaaac 400  Q
    |  |||||||| |||||||||||||||| |||||||||| ||||||    
T  11087683 aagaatttattggtggattaaaatgaggatataataggatgaaaac 11087728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 451
Target Start/End: Complemental strand, 29315399 - 29315241
Alignment:
Q  294 ttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataatagg 392  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||       || | || ||||| ||||||||| |||||||||||||||    
T  29315399 ttgttacgagaaaaatataacatattaaatttattgaaaagataaagtatgtgccaaaaaataaatatatattggtggattaaattgagggtataatagg 29315300  T
Q  393 aagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||| ||||||| |||||| | ||| |||| |||  |||||||||||| |||||||    
T  29315299 aagaaaatgtgcaaatatacactttgctattttcatggaaattttctaaaacgacactt 29315241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 321
Target Start/End: Original strand, 38457646 - 38457807
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtat--gagagagagcgtnnnnnnntaggaa 259  Q
    |||||||||||||||||||||||||||| |||||||||||| | |||||| |||||| ||||||||||| | |  |||||||||||         | |||    
T  38457646 ataatttttatattgacttaaaataatttaaaagatgtgcatagtatttaaaaaattgacaattgtttgttttgggagagagagcgcaaaaaaacatgaa 38457745  T
Q  260 tttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaa 321  Q
    ||| ||||||| |||||||| ||| |||||||||||||||| ||||||| ||||| ||||||    
T  38457746 tttgttggagagaaagataacaaccgacaattgtttgttacaagagaaagataacatattaa 38457807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 283 - 451
Target Start/End: Complemental strand, 1530377 - 1530208
Alignment:
Q  283 ctgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaattta-ttgtggattaaaatgag 381  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||        ||| || ||| |||| |||||||||||     
T  1530377 ctgacaattgtttgttacgaaagaaagataacatattaaatttattgaaaagataaaatgtgtggaaaaaaataggaagttatttgtagattaaaatgaa 1530278  T
Q  382 ggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||| ||||||||  ||||||||||||| || ||  || | ||||||||||||||||| ||||||    
T  1530277 ggtataataagaagaaaatttgcaaaaatacacctccctaattcggtgttaattttctaaaaaaacactt 1530208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 1256377 - 1256241
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacac 414  Q
    ||||||||||||||||||||||||||||||||       ||  ||||||||| ||||||||||| || |||||||||| | |||| ||||||||||||||    
T  1256377 tattaaatttattggaaagataaagtgtgtgctaaaaaataagaatttattggtggattaaaattagagtataatagggaaaaaatgtgcaaaaatacac 1256278  T
Q  415 atcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |  |||  || | ||||||||||||||||||||||||    
T  1256277 aatgctaattcggtgttaattttctaaaaagacactt 1256241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 298
Target Start/End: Complemental strand, 1530528 - 1530394
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatt 261  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||||| | |||| ||||||||||| |||| |||||||||        || |||||    
T  1530528 ataatttttatattgatctaaaataattaaaaagatctgcacaatatttaaataatttacaattgtttgttatg-gagagagcgcaaaacaata-gaatt 1530431  T
Q  262 tattggagaaaaagataataactgacaattgtttgtt 298  Q
      |||||||||||| ||||||| ||||||||||||||    
T  1530430 agttggagaaaaagttaataaccgacaattgtttgtt 1530394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 414
Target Start/End: Original strand, 3742189 - 3742313
Alignment:
Q  291 tgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataat 389  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| |        |||| || |||| |||||||||| ||||||||||||    
T  3742189 tgtttgttatgagaaaaatataacatattaaatttattggaaagataaagtgtgcgtcaaaaagtagagatatattggtggattaaattgagggtataat 3742288  T
Q  390 aggaagaaaacgtgcaaaaatacac 414  Q
    |  ||||||| ||||||||||||||    
T  3742289 aaaaagaaaatgtgcaaaaatacac 3742313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 414
Target Start/End: Original strand, 34039248 - 34039458
Alignment:
Q  202 acaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnntaggaatttattggagaaaaagataataactgacaattgtttgttacg 301  Q
    ||||||||||||||||| ||||||||||| |||||||||| |           |||||||| ||||||||||| ||| ||||| |||| | ||||||| |    
T  34039248 acaatatttagaaaattgacaattgtttgttatgagagagtg---taaaaaaaaggaatttgttggagaaaaatatagtaactaacaaatatttgttatg 34039344  T
Q  302 agagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaac 400  Q
    ||||||| ||||  ||||||| |||||||||||| ||| |||||||       ||| ||| |||| ||||||||||| |||| || ||||| |||||||     
T  34039345 agagaaagataatatattaaacttattggaaagagaaaatgtgtgcaagaaaataggaatatattggtggattaaaacgaggataaaatagaaagaaaat 34039444  T
Q  401 gtgcaaaaatacac 414  Q
    ||| ||||||||||    
T  34039445 gtgtaaaaatacac 34039458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 16599132 - 16599066
Alignment:
Q  173 attgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagag 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||| ||||||||    
T  16599132 attgacttaaaataattaaagagatgtgcacaatatttagaaaattgataattatttgttatgagag 16599066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 343
Target Start/End: Complemental strand, 30887600 - 30887514
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgt 343  Q
    |||||| ||||||||||||||| ||||| |||| ||||||||| |||||||| || || |||||||||||||  |||||||||||||    
T  30887600 gaatttgttggagaaaaagatagtaactaacaaatgtttgttaggagagaaaaattacatattaaatttattaaaaagataaagtgt 30887514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 443
Target Start/End: Complemental strand, 3443461 - 3443332
Alignment:
Q  316 tattaaatttattggaaagataaagtgtgtgcnnnnnnntagaaatttatt-gtggattaaaatgagggtataataggaagaaaa-cgtgcaaaaataca 413  Q
    |||||||||||||||| ||||||||||||||        ||| || ||||| |||||||||||||||||||||||||||| ||||  |||||||||||||    
T  3443461 tattaaatttattggatagataaagtgtgtgaaaaagaataggaaattattagtggattaaaatgagggtataataggaaaaaaagtgtgcaaaaataca 3443362  T
Q  414 catcgctgttttgatgttaattttctaaaa 443  Q
    | ||||| ||||  ||||||  ||||||||    
T  3443361 cttcgctatttttgtgttaaaattctaaaa 3443332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 36683451 - 36683524
Alignment:
Q  370 gattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| | ||| |||| |||  ||||||||||||    
T  36683451 gattaaattgagggtataataggaagaaaatgtgcaaaaatacactttgctattttcatggaaattttctaaaa 36683524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 35970166 - 35970090
Alignment:
Q  367 gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaa 443  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||| | |||  |||| ||||||| ||||||||    
T  35970166 gtggattaaaacgagggtatgataggaagaaaatgtgcaaaaatacactttgctaatttggtgttaatattctaaaa 35970090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 3741934 - 3742013
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    ||||||||||||| || ||| |||||  |  ||||||||| | | |||||||||||||||||||||||||||||||||||    
T  3741934 tggaagactcgttagaattgttgatggaaaatgaagagggggaagtagttgaagactcatttgacaagatacaagaacaa 3742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 35970369 - 35970440
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatg 235  Q
    ||||||||||||||||||||||||||||||| |||| ||  |||| |||| |||||| ||||||||||| ||||    
T  35970369 ataatttttatattgacttaaaataattaaagagatatg--caatttttaaaaaattgacaattgtttgttatg 35970440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 35970468 - 35970538
Alignment:
Q  258 aatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttatt 328  Q
    ||||||||| || |||||||| ||||| |||| | ||||||| |||||||| ||||| |||||||||||||    
T  35970468 aatttattgaagtaaaagatagtaactaacaaatatttgttatgagagaaagataacatattaaatttatt 35970538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 34039174 - 34039251
Alignment:
Q  55 gaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    |||||||| |||||   ||||||| |||||||||| |||| |||| |||||||||  |||||||||||| ||||||||    
T  34039174 gaagactcattggaacggctgatgggaggtgaagatggagaaatacttgaagacttgtttgacaagatagaagaacaa 34039251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 38459086 - 38459175
Alignment:
Q  359 aatttattgt-ggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| |||||||||    | | |||||||| ||||||| | |||||||||||    
T  38459086 aatttattgttggattaaaatgagggtataatagaaagaaattgtgtaaaaataca----gttattttgatggtaatttttttaaaagacactt 38459175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 7578055 - 7578009
Alignment:
Q  194 agatgtgcacaatatttagaaaattaacaattgtttggtatgagaga 240  Q
    |||| |||||||||||||||||||||| ||||||||| || ||||||    
T  7578055 agatatgcacaatatttagaaaattaaaaattgtttgttaagagaga 7578009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 1256478 - 1256445
Alignment:
Q  74 tgatgagaggtgaagagggagcaatagttgaaga 107  Q
    ||||||||||||||||||||| ||||||||||||    
T  1256478 tgatgagaggtgaagagggagaaatagttgaaga 1256445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7695126 - 7695086
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaag 41  Q
    |||||||| |||||||||||||||| ||||||||| |||||    
T  7695126 ttgagagaagaaaaataaaagactccatgaatgttcaaaag 7695086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30887714 - 30887670
Alignment:
Q  1 ttgagagatgaaaaataaaagactctatgaatgtttaaaagaaag 45  Q
    ||||| || |||||||||||||||| ||||||||| |||||||||    
T  30887714 ttgagggaagaaaaataaaagactccatgaatgttcaaaagaaag 30887670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 131; Significance: 9e-68; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 1098 - 1389
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttggtatgagagagagcgtnnnnnnnta--ggaa 259  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||         |   |||    
T  1098 ataatttttatattgagtgaaaataattaaaaagatgtgcacaatatttagaaaattgacaattgtttgttatgagagagagcgcgcaaaaaaaattgaa 1197  T
Q  260 tttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnntagaa 359  Q
    ||| ||||||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||        || ||    
T  1198 tttgttggagaaaaagataataagtgacaattgtttgttaagagagaaagataacatattaaatttattgaaaagataaagtgtgtgtcaaaaaataaaa 1297  T
Q  360 atttattgtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagacactt 451  Q
    ||||||||  |||||||||||| | ||||||||||||||| || ||||||||||||| ||| || || |||||||||| |||||||| ||||    
T  1298 atttattggtgattaaaatgagagcataataggaagaaaatgtacaaaaatacacattgctattctggtgttaattttttaaaaagatactt 1389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 561 - 756
Alignment:
Q  254 taggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnn 353  Q
    ||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||| ||||| || | ||||||||||||||||||||||||||           
T  561 taggaatttgttggagaaaaagataataacagacaagtgtttattacgagagaaagataacatacttaatttattggaaagataaagtgtgtgtaaaaaa 660  T
Q  354 ntagaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgt--tttgatgttaattttctaaaaaga 446  Q
     |||||||||||| |||||||||||| |||||||||||| ||||||| ||| |||| ||||||||||| |  ||||||||||||||| ||||||||    
T  661 atagaaatttattggtggattaaaattagggtataatagaaagaaaatgtgtaaaagtacacatcgctataatttgatgttaattttttaaaaaga 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 489 - 527
Alignment:
Q  169 ttatattgacttaaaataattaaaaagatgtgcacaata 207  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  489 ttatattgacttaaaataagtaaaaagatgtggacaata 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 86; Significance: 7e-41; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 255 - 436
Target Start/End: Original strand, 257205 - 257386
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnn 354  Q
    |||||||  ||| |||||||||||||||||| |||||||||||| ||||||||  ||||| |||||||||||||| |||||||||||||||||           
T  257205 aggaattcgttgaagaaaaagataataactg-caattgtttgtttcgagagaaggataacatattaaatttattgaaaagataaagtgtgtgcaaaaaaa 257303  T
Q  355 tagaaatttattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattt 436  Q
    ||| ||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||  |||||||||    
T  257304 taggaatttattgatggattaatatgagggtataataggaagaaaatgtgtaaaaatacacatcgctattttcgtgttaattt 257386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 257021 - 257149
Alignment:
Q  53 tggaagactcgttggatttgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagatacaag----------aacaagatgacaat- 141  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||     
T  257021 tggaagacttgttggaattgttgatgagaggtgaagagggagcaatagttgaagacttatttgacaagatacaagaaagaataacaacaagatgacaatg 257120  T
Q  142 --gaagaagaaatttcatcaatataattt 168  Q
      |||||||||||||||||||||||||||    
T  257121 aagaagaagaaatttcatcaatataattt 257149  T

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Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 272117 - 272049
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaattaacaattgtttg 230  Q
    |||||||| |||| ||||||||||||||||| |||| ||||||||||||| |||| | | |||||||||    
T  272117 ataattttgatatagacttaaaataattaaagagatatgcacaatatttaaaaaaatgaaaattgtttg 272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 257 - 434
Target Start/End: Complemental strand, 5798 - 5619
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc-nnnnnnnt 355  Q
    |||||| ||||||||||||||| ||||| |||| |||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||        |    
T  5798 gaatttgttggagaaaaagatagtaactaacaaatgtttgttacaagagaaaaataacatattaaatttattgaaaagagaaagtgtgtgcaaaaaaatt 5699  T
Q  356 agaaatttatt-gtggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaat 434  Q
    || ||| |||| ||| |||||||||| |||||||| ||||||||| |||||||||||||| | ||| |||||||||||||    
T  5698 aggaatatattagtgaattaaaatgatggtataattggaagaaaatgtgcaaaaatacactttgctattttgatgttaat 5619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 255 - 399
Target Start/End: Complemental strand, 4350 - 4205
Alignment:
Q  255 aggaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgcnnnnnnn 354  Q
    |||||||| ||||||||||| | | | ||| |||| |||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||           
T  4350 aggaatttgttggagaaaaacacattgactaacaaatgtttgttacgagagaaagataatatattaaatttattggaaagagaaagtgtgtgcaaaaaaa 4251  T
Q  355 tagaaatttatt-gtggattaaaatgagggtataataggaagaaaa 399  Q
     || ||| |||| |||||||||||||||||||||||||||||||||    
T  4250 aaggaatatattggtggattaaaatgagggtataataggaagaaaa 4205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 448
Target Start/End: Complemental strand, 4024 - 3838
Alignment:
Q  264 ttggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtgc-nnnnnnntagaaatt 362  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||         || |||     
T  4024 ttggagaaaaacacaataactaacaaatgtttgttacgagagaaaaataacatgttaaatttattggaaagagaaagtgtgtgcaaaaaaaaaaggaata 3925  T
Q  363 tattg-tggattaaaatgagggtataataggaagaaaacgtgcaaaaatacacatcgctgttttgatgttaattttctaaaaagaca 448  Q
    ||||| | ||||||||||||||||||||||||||||||  || |||||||||| ||| | ||||  ||||||| || ||||| ||||    
T  3924 tattgttagattaaaatgagggtataataggaagaaaaactgaaaaaatacacttcgttattttagtgttaatattttaaaacgaca 3838  T

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Target: scaffold0841; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 4462 - 4412
Alignment:
Q  80 gaggtgaagagggagcaatagttgaagactcatttgacaagatacaagaacaa 132  Q
    ||||||||||||||  ||||||||||||||| |||||||| ||| ||||||||    
T  4462 gaggtgaagaggga--aatagttgaagactcgtttgacaatataaaagaacaa 4412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 3773 - 3862
Alignment:
Q  257 gaatttattggagaaaaagataataactgacaattgtttgttacgagagaaatataacttattaaatttattggaaagataaagtgtgtg 346  Q
    |||||| || |||||| ||||||||||| | | || ||||||| |||| ||| ||||| |||||||||||| ||||||| ||||||||||    
T  3773 gaatttgttagagaaagagataataactaaaatttatttgttatgagacaaagataacatattaaatttatcggaaagagaaagtgtgtg 3862  T

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Target: scaffold0475 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 11234 - 11180
Alignment:
Q  162 ataatttttatattgacttaaaataattaaaaagatgtgcacaatatttagaaaa 216  Q
    |||||||| |||| ||||||||||||||||| |||| ||||||||||||| ||||    
T  11234 ataattttgatatagacttaaaataattaaagagatatgcacaatatttaaaaaa 11180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 413
Target Start/End: Original strand, 184596 - 184639
Alignment:
Q  370 gattaaaatgagggtataataggaagaaaacgtgcaaaaataca 413  Q
    |||||||||||||||||||||| || |||| |||||||||||||    
T  184596 gattaaaatgagggtataatagaaaaaaaatgtgcaaaaataca 184639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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