View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20151_low_45 (Length: 426)

Name: NF20151_low_45
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20151_low_45
NF20151_low_45
[»] chr1 (28 HSPs)
chr1 (22-186)||(39897389-39897548)
chr1 (189-269)||(3094967-3095047)
chr1 (189-269)||(1067296-1067376)
chr1 (189-269)||(40232529-40232609)
chr1 (343-414)||(3095114-3095185)
chr1 (189-269)||(41097095-41097176)
chr1 (189-269)||(21498671-21498750)
chr1 (189-262)||(8267015-8267089)
chr1 (189-267)||(16836422-16836500)
chr1 (189-269)||(52100221-52100301)
chr1 (189-269)||(17213583-17213662)
chr1 (189-269)||(19725043-19725123)
chr1 (195-249)||(13894181-13894235)
chr1 (189-269)||(2367933-2368014)
chr1 (195-268)||(8273294-8273367)
chr1 (189-269)||(2384368-2384448)
chr1 (197-269)||(27308065-27308137)
chr1 (340-423)||(8273144-8273229)
chr1 (189-234)||(22428353-22428398)
chr1 (189-234)||(26199384-26199429)
chr1 (377-414)||(41096945-41096982)
chr1 (197-268)||(23284976-23285048)
chr1 (344-407)||(17213179-17213242)
chr1 (199-269)||(26319382-26319452)
chr1 (26-104)||(39890002-39890080)
chr1 (197-269)||(23254356-23254429)
chr1 (36-100)||(39882487-39882551)
chr1 (36-104)||(41527669-41527737)
[»] chr5 (34 HSPs)
chr5 (189-269)||(557573-557653)
chr5 (189-269)||(562345-562425)
chr5 (189-269)||(36936647-36936727)
chr5 (189-269)||(36941401-36941481)
chr5 (343-414)||(557721-557792)
chr5 (343-414)||(562493-562564)
chr5 (343-414)||(36941262-36941333)
chr5 (189-269)||(42002311-42002391)
chr5 (343-414)||(36936508-36936579)
chr5 (189-269)||(3666751-3666831)
chr5 (193-269)||(12044268-12044344)
chr5 (344-414)||(12044130-12044200)
chr5 (191-269)||(15394991-15395069)
chr5 (348-414)||(32460543-32460609)
chr5 (189-269)||(13300626-13300707)
chr5 (189-269)||(41099550-41099629)
chr5 (189-269)||(41997520-41997600)
chr5 (346-414)||(41997670-41997738)
chr5 (188-269)||(31732417-31732499)
chr5 (189-269)||(21323177-21323258)
chr5 (189-269)||(8771141-8771221)
chr5 (346-414)||(42002461-42002529)
chr5 (189-263)||(23976708-23976782)
chr5 (189-259)||(32460695-32460765)
chr5 (189-267)||(36949600-36949677)
chr5 (344-414)||(13300482-13300558)
chr5 (344-414)||(21323033-21323109)
chr5 (189-269)||(24435314-24435396)
chr5 (198-269)||(27425242-27425313)
chr5 (344-398)||(3666900-3666956)
chr5 (189-234)||(21827227-21827272)
chr5 (377-414)||(31732612-31732649)
chr5 (193-223)||(1429358-1429388)
chr5 (377-414)||(1428868-1428905)
[»] chr8 (20 HSPs)
chr8 (189-269)||(4237477-4237557)
chr8 (189-269)||(4242216-4242296)
chr8 (343-414)||(4237339-4237410)
chr8 (343-414)||(4242078-4242149)
chr8 (344-414)||(31448863-31448933)
chr8 (189-268)||(31449002-31449081)
chr8 (344-414)||(43301742-43301812)
chr8 (189-269)||(4582417-4582497)
chr8 (189-269)||(25367144-25367225)
chr8 (189-269)||(8330522-8330603)
chr8 (189-269)||(37772582-37772663)
chr8 (188-265)||(42972978-42973055)
chr8 (189-269)||(22104699-22104780)
chr8 (340-412)||(42973114-42973188)
chr8 (199-269)||(43301867-43301936)
chr8 (189-269)||(16066345-16066426)
chr8 (189-232)||(19391268-19391311)
chr8 (344-414)||(8330374-8330450)
chr8 (377-414)||(37772777-37772814)
chr8 (229-269)||(34817879-34817919)
[»] chr3 (33 HSPs)
chr3 (189-269)||(3034521-3034601)
chr3 (189-269)||(3693497-3693577)
chr3 (189-269)||(8070557-8070637)
chr3 (189-269)||(8888808-8888888)
chr3 (193-269)||(8884052-8884128)
chr3 (343-414)||(3673591-3673662)
chr3 (343-414)||(3693645-3693716)
chr3 (343-414)||(8070704-8070775)
chr3 (344-414)||(8888942-8889012)
chr3 (187-269)||(6595565-6595647)
chr3 (344-414)||(8884196-8884266)
chr3 (343-414)||(3034669-3034740)
chr3 (189-269)||(10585327-10585408)
chr3 (189-269)||(8197472-8197552)
chr3 (189-269)||(30248-30328)
chr3 (189-269)||(8223955-8224035)
chr3 (189-269)||(18349769-18349849)
chr3 (195-269)||(3673449-3673523)
chr3 (190-269)||(12898885-12898964)
chr3 (189-269)||(14424852-14424933)
chr3 (197-268)||(631827-631898)
chr3 (189-269)||(16056054-16056135)
chr3 (197-269)||(35456017-35456087)
chr3 (189-260)||(51923224-51923295)
chr3 (377-414)||(631995-632032)
chr3 (377-414)||(10585177-10585214)
chr3 (193-269)||(16043383-16043460)
chr3 (344-387)||(429462-429505)
chr3 (197-268)||(16023374-16023447)
chr3 (189-269)||(429289-429369)
chr3 (225-269)||(35458187-35458231)
chr3 (229-269)||(45903718-45903758)
chr3 (197-269)||(53358969-53359041)
[»] chr2 (26 HSPs)
chr2 (189-269)||(10159852-10159932)
chr2 (187-269)||(28856005-28856087)
chr2 (196-269)||(30659029-30659102)
chr2 (344-414)||(30659170-30659240)
chr2 (344-412)||(10159717-10159785)
chr2 (189-269)||(17452723-17452803)
chr2 (189-259)||(34070439-34070509)
chr2 (189-269)||(6297051-6297132)
chr2 (189-269)||(24292586-24292666)
chr2 (197-269)||(35602519-35602590)
chr2 (189-269)||(42249228-42249307)
chr2 (189-268)||(30635656-30635735)
chr2 (189-265)||(22845261-22845335)
chr2 (189-269)||(7559467-7559547)
chr2 (189-269)||(24285909-24285988)
chr2 (189-269)||(25375784-25375864)
chr2 (197-269)||(30640148-30640220)
chr2 (344-414)||(19588682-19588752)
chr2 (349-414)||(35602629-35602694)
chr2 (193-268)||(17327912-17327988)
chr2 (197-269)||(30629727-30629799)
chr2 (377-414)||(6296908-6296945)
chr2 (189-253)||(377432-377496)
chr2 (197-269)||(6857203-6857275)
chr2 (376-407)||(30637203-30637234)
chr2 (340-412)||(17452510-17452582)
[»] scaffold0182 (2 HSPs)
scaffold0182 (344-414)||(8880-8950)
scaffold0182 (199-269)||(9016-9087)
[»] chr7 (37 HSPs)
chr7 (189-269)||(11017205-11017285)
chr7 (189-269)||(47102407-47102487)
chr7 (189-269)||(9650097-9650176)
chr7 (347-414)||(23866754-23866821)
chr7 (189-269)||(27257093-27257174)
chr7 (200-269)||(40864539-40864609)
chr7 (189-269)||(10499251-10499332)
chr7 (189-269)||(10504280-10504361)
chr7 (344-414)||(9649959-9650029)
chr7 (189-269)||(19097277-19097358)
chr7 (187-269)||(11247429-11247511)
chr7 (189-269)||(838481-838562)
chr7 (189-269)||(1203661-1203742)
chr7 (345-407)||(47102560-47102624)
chr7 (189-244)||(36477861-36477916)
chr7 (227-269)||(8076911-8076953)
chr7 (200-269)||(9009023-9009092)
chr7 (344-414)||(27257241-27257317)
chr7 (344-414)||(40864395-40864471)
chr7 (344-402)||(1044245-1044304)
chr7 (199-265)||(1044108-1044174)
chr7 (349-414)||(8077029-8077095)
chr7 (189-269)||(8954387-8954469)
chr7 (187-269)||(10488452-10488534)
chr7 (211-269)||(10531995-10532053)
chr7 (189-234)||(845673-845718)
chr7 (189-234)||(853054-853099)
chr7 (189-234)||(1211058-1211103)
chr7 (208-269)||(11296907-11296967)
chr7 (203-268)||(13343562-13343627)
chr7 (189-261)||(13346502-13346575)
chr7 (198-268)||(7838971-7839041)
chr7 (344-390)||(9009159-9009205)
chr7 (187-269)||(10488262-10488344)
chr7 (358-404)||(40997834-40997880)
chr7 (208-269)||(11289103-11289163)
chr7 (197-269)||(15566205-15566276)
[»] scaffold0060 (3 HSPs)
scaffold0060 (189-269)||(52054-52135)
scaffold0060 (189-269)||(47110-47191)
scaffold0060 (344-414)||(51908-51984)
[»] chr6 (12 HSPs)
chr6 (189-269)||(6111898-6111979)
chr6 (189-269)||(14074025-14074105)
chr6 (199-269)||(2862673-2862743)
chr6 (199-269)||(2881976-2882046)
chr6 (344-414)||(2759254-2759326)
chr6 (189-269)||(26981577-26981658)
chr6 (193-269)||(27073963-27074040)
chr6 (344-402)||(15645697-15645756)
chr6 (344-414)||(28963868-28963941)
chr6 (344-400)||(2862552-2862609)
chr6 (344-400)||(2881855-2881912)
chr6 (202-265)||(28964005-28964068)
[»] chr4 (26 HSPs)
chr4 (189-269)||(7902248-7902329)
chr4 (189-269)||(13521122-13521201)
chr4 (189-269)||(39320439-39320519)
chr4 (189-269)||(3997202-3997283)
chr4 (189-269)||(34561280-34561361)
chr4 (193-269)||(41817667-41817744)
chr4 (189-269)||(15799271-15799350)
chr4 (344-414)||(13520984-13521054)
chr4 (199-269)||(52742397-52742467)
chr4 (344-412)||(41817811-41817881)
chr4 (344-414)||(3992765-3992841)
chr4 (189-269)||(26035078-26035159)
chr4 (200-265)||(31297659-31297724)
chr4 (197-269)||(3310090-3310162)
chr4 (189-269)||(9190671-9190751)
chr4 (344-414)||(39320590-39320662)
chr4 (189-269)||(14867926-14868008)
chr4 (199-269)||(42314758-42314828)
chr4 (215-268)||(1150492-1150545)
chr4 (344-414)||(34561429-34561505)
chr4 (189-269)||(9184832-9184912)
chr4 (216-268)||(32545780-32545832)
chr4 (344-404)||(52742258-52742317)
chr4 (225-268)||(12383481-12383524)
chr4 (189-219)||(14891392-14891422)
chr4 (346-404)||(31297533-31297593)
[»] scaffold0070 (4 HSPs)
scaffold0070 (189-268)||(59281-59361)
scaffold0070 (189-268)||(63483-63563)
scaffold0070 (344-414)||(59430-59506)
scaffold0070 (344-414)||(63632-63708)
[»] scaffold0015 (1 HSPs)
scaffold0015 (189-269)||(192741-192821)
[»] scaffold0061 (1 HSPs)
scaffold0061 (189-269)||(49100-49181)
[»] scaffold0041 (2 HSPs)
scaffold0041 (189-269)||(34861-34942)
scaffold0041 (344-414)||(34717-34793)
[»] scaffold0017 (1 HSPs)
scaffold0017 (189-269)||(149453-149534)
[»] scaffold0044 (2 HSPs)
scaffold0044 (189-269)||(65310-65390)
scaffold0044 (189-269)||(81558-81638)
[»] scaffold0863 (1 HSPs)
scaffold0863 (189-269)||(144-224)
[»] scaffold0132 (1 HSPs)
scaffold0132 (189-269)||(24418-24498)
[»] scaffold0020 (1 HSPs)
scaffold0020 (195-269)||(398-473)
[»] scaffold0357 (2 HSPs)
scaffold0357 (189-269)||(3470-3551)
scaffold0357 (193-269)||(13058-13135)
[»] scaffold0045 (1 HSPs)
scaffold0045 (197-269)||(83786-83858)
[»] scaffold1910 (1 HSPs)
scaffold1910 (189-269)||(734-815)
[»] scaffold0628 (3 HSPs)
scaffold0628 (344-406)||(7458-7522)
scaffold0628 (199-248)||(7309-7358)
scaffold0628 (189-253)||(5591-5655)
[»] scaffold0004 (1 HSPs)
scaffold0004 (189-253)||(200078-200142)
[»] scaffold0327 (1 HSPs)
scaffold0327 (193-267)||(8724-8799)
[»] scaffold0131 (1 HSPs)
scaffold0131 (198-269)||(8453-8524)
[»] scaffold0009 (1 HSPs)
scaffold0009 (189-240)||(71992-72043)
[»] scaffold0211 (1 HSPs)
scaffold0211 (199-253)||(22956-23010)


Alignment Details
Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 39897548 - 39897389
Alignment:
Q  22 cctgtaatagtgtaatcatacagttctggtttgttttctcttagcgtttccgttaataaaatgtacggactatcatttgtgaattgagttagactttgaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  39897548 cctgtaatagtgtaatcatacagttctggtttgttttctcttagcgtttccgttaataaaatgtatggactatcatttgtgaactgagttagactttgaa 39897449  T
Q  122 cttggtgttggataatacaaattaattactcatttgttgcatgtaaaagcttaaactcttataat 186  Q
     ||||||||| ||||||||    ||| ||||||||||||||||| ||||||||||||||||||||    
T  39897448 tttggtgttgaataataca----aatgactcatttgttgcatgt-aaagcttaaactcttataat 39897389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 3094967 - 3095047
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  3094967 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 3095047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 1067296 - 1067376
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  1067296 attgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacttggagactaagaaagcactttctaataatg 1067376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 40232609 - 40232529
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||    
T  40232609 attgtgttccaaaatattctagattgcgtttcaaaatattttagcataacttggggactaagaaaacactttctactaatg 40232529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 3095114 - 3095185
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  3095114 cagtgcttactttgttcacataactatgtacctcttaaaggtacacccccactatataaacactactaatgt 3095185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 41097176 - 41097095
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  41097176 attgtattcgaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 41097095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 21498671 - 21498750
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  21498671 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac-aagaaagcactttttaataatg 21498750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 8267089 - 8267015
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataactt-ggggactaagaaagcactttct 262  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||| ||||||||    
T  8267089 attgtgttccaaaatattctagattgcgttccaaaatattttagcaaaacttggggggctaagaaaacactttct 8267015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 16836500 - 16836422
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataa 267  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||| |||||| ||||||    
T  16836500 attgtgttctaaaatattctagattgcgttctaaaatattttagcaaaacttggggacaaagaaatcactttttaataa 16836422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 52100301 - 52100221
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||| |||||| | ||||||    
T  52100301 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaaacactttttgataatg 52100221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 17213662 - 17213583
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||| |||||  ||| ||||||| |||||||||||||||    
T  17213662 attgtattccaaaaaattctagattgcgttccaaaatattttagcaaaactt-aggattaagaaaacactttctaataatg 17213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 19725123 - 19725043
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| ||| |||| ||||||||||||||||| ||| |||||||||| ||||||||||| |||||| |||||| ||||||||    
T  19725123 attgagtttcaaattattctagattgcgttctaaaatattttagcaaaacttggggacaaagaaaacactttttaataatg 19725043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 13894181 - 13894235
Alignment:
Q  195 ttccaaaatattctagattgcgttccaaattattttagcataacttggggactaa 249  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  13894181 ttccaaaatattttagattgcgttccaaaatattttagcaaaacttggggactaa 13894235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 2367933 - 2368014
Alignment:
Q  189 attgtgttccaaaatattctaga-ttgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||| |||||||| ||| || ||||||| ||||| ||||| ||||||||||||| ||||||||    
T  2367933 attgtattccaaaatattctagaattgcgttctaaaataatttagcaaaactttgggaccaagaaagcactttttaataatg 2368014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 8273367 - 8273294
Alignment:
Q  195 ttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||||||||| | |||||| |||| |||||||| | |||||| ||||||||||| ||||||||||||||    
T  8273367 ttccaaaatattctataatgcgtttcaaaatattttagtaaaacttgaggactaagaaaacactttctaataat 8273294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 2384448 - 2384368
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| |||||||||||| ||| |||||||| ||| || ||||||| ||||| ||||| ||||||||||||| ||||||||    
T  2384448 attgtattccaaaatattatagtttgcgttctaaaataatttagcaaaactttgggaccaagaaagcactttttaataatg 2384368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 27308137 - 27308065
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||| || ||||||||||||| ||||||| || | |||||||| ||||||||||||||| |||||||    
T  27308137 ccaaaatattttatattgcgttccaaaatattttatcaaagcttggggattaagaaagcactttccaataatg 27308065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 8273229 - 8273144
Alignment:
Q  340 ctccagtgcttacttcgttcacataactatgtacctc--ttagaggtacacccccactatataaacactattaatgtctctgctcc 423  Q
    |||| ||||||||||||||||||||| ||||||| ||  | |||||||||  |||||||||||| ||||| |||||| | ||||||    
T  8273229 ctccggtgcttacttcgttcacataattatgtacgtccatcagaggtacaaacccactatataagcactactaatgtgtgtgctcc 8273144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 22428398 - 22428353
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagca 234  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||    
T  22428398 attgtgttccaaaatattctagattgcgttataaaatattttagca 22428353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 26199384 - 26199429
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagca 234  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||    
T  26199384 attgtgttccaaaatattttagattgcgttctaaaatattttagca 26199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 41096982 - 41096945
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  41096982 ttagaggtacacccccactatataaacactaataatgt 41096945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 268
Target Start/End: Complemental strand, 23285048 - 23284976
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattatttta-gcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||||  ||||||||||||||| ||||||| ||| ||||| |||||||||||| || ||| |||||||    
T  23285048 ccaaaatatttcagattgcgttccaaaatattttaggcaaaacttagggactaagaaaacaatttataataat 23284976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 17213242 - 17213179
Alignment:
Q  344 agtgcttacttcgttcacataactatgta--cctcttagaggtacacccccactatataaacacta 407  Q
    ||||||||||||||| |||||| ||||||  ||| |||||||||||||||  ||||||||||||||    
T  17213242 agtgcttacttcgtttacataattatgtacccctattagaggtacacccc--ctatataaacacta 17213179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 26319452 - 26319382
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| ||||||| |||||||| |||| |||   |||||||  | |||||||||||||||||||||||    
T  26319452 aaaatattttagattgtgttccaaaatattctagtcaaacttggaaattaagaaagcactttctaataatg 26319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 39890080 - 39890002
Alignment:
Q  26 taatagtgtaatcatacagttctggtttgttttctcttagcgtttccgttaataaaatgtacggactatcatttgtgaa 104  Q
    ||||| ||| ||||||||||| || ||||||||||||| | |||  | ||||||||||||| |||| ||| ||||||||    
T  39890080 taataatgtcatcatacagttttgatttgttttctcttggtgttctcattaataaaatgtatggacaatcgtttgtgaa 39890002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 23254429 - 23254356
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttag-cataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||| | ||||| |||||||| |||||||| || |||||  ||||||||||| |||||| ||||||||    
T  23254429 ccaaaatattttcgattgtgttccaaaatattttagtcaaaacttatggactaagaaaacactttttaataatg 23254356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 39882551 - 39882487
Alignment:
Q  36 atcatacagttctggtttgttttctcttagcgtttccgttaataaaatgtacggactatcatttg 100  Q
    |||||||| || || |||||||||| |||| ||| | |||||||||||||| |||| ||||||||    
T  39882551 atcatacaattttgatttgttttcttttagtgttccggttaataaaatgtatggacaatcatttg 39882487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 41527669 - 41527737
Alignment:
Q  36 atcatacagttctggtttgttttctcttagcgtttccgttaataaaatgtacggactatcatttgtgaa 104  Q
    ||||| ||||| || ||||||||||||| | ||| |||||||||||||||| |||| ||| ||| ||||    
T  41527669 atcattcagttatgatttgttttctcttggtgttcccgttaataaaatgtatggacaatcgtttttgaa 41527737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 557573 - 557653
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  557573 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaagcactttctaataatg 557653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 562345 - 562425
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  562345 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaagcactttctaataatg 562425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 36936727 - 36936647
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36936727 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 36936647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 36941481 - 36941401
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36941481 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 36941401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 557721 - 557792
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  557721 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 557792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 562493 - 562564
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  562493 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 562564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Complemental strand, 36941333 - 36941262
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36941333 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 36941262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 42002311 - 42002391
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  42002311 attgtgttccaaaatattctagattgcgttccaaattattttagtaaaacttgggggctaagaaaacactttctaataatg 42002391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 343 - 414
Target Start/End: Complemental strand, 36936579 - 36936508
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  36936579 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccctactatataaacactactaatgt 36936508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 3666751 - 3666831
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||| | |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  3666751 attgtgttccaaaatattttcgattgcgttccaaaatattttagcaaaacttagggactaagaaagcactttctaataatg 3666831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 12044344 - 12044268
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| |||||||||||||||    
T  12044344 tgttccaaaatattctagattgcgttccaaaatattttaacaaaacttggggactaagaaatcactttctaataatg 12044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 12044200 - 12044130
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  12044200 agtgcttacttcgttcacataactatgtacctcttaaagatacacccccactatataaacactactaatgt 12044130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 15395069 - 15394991
Alignment:
Q  191 tgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  15395069 tgtgttccaaaatattctagattgtgttctaaaatattttagcaaaacttggggactaagaaaacactttctaataatg 15394991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 32460609 - 32460543
Alignment:
Q  348 cttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32460609 cttacttcattcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 32460543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 13300707 - 13300626
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  13300707 attgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 13300626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 41099550 - 41099629
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  41099550 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac-aagaaagcactttttaataatg 41099629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 41997520 - 41997600
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| |||| |||||||  |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  41997520 attgtcttcccaaatatttcagattgtgttccaaattattttagtaaaacttggggactaagaaagcactttctaataatg 41997600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 41997670 - 41997738
Alignment:
Q  346 tgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||    
T  41997670 tgcttacttcgttcacataactatgtacctcctagaagtacacccccaatatataaacactactaatgt 41997738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 31732417 - 31732499
Alignment:
Q  188 tattgtgttccaaaatattctagattgcgttccaaatta-ttttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||| |||||||||||| |||||||||||||||| || |||||||| ||||||||||||| |||| |||||||||||||||    
T  31732417 tattgtattccaaaatattgtagattgcgttccaaaatatttttagcaaaacttggggactaggaaaacactttctaataatg 31732499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 21323258 - 21323177
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaatta-ttttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||||||||||||||||||||||||||||| || |||||||| || ||||||||||||||| |||||| ||||||||    
T  21323258 attgcgttccaaaatattctagattgcgttccaaaatatttttagcaaaatttggggactaagaaaacactttgtaataatg 21323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 8771141 - 8771221
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||| ||| |||||||| ||| |||||||||| ||||||||||| |||||| |||||| ||||||||    
T  8771141 attgtgttccaaaatattttagtttgcgttctaaaatattttagcaaaacttggggacaaagaaaacactttttaataatg 8771221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 42002461 - 42002529
Alignment:
Q  346 tgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||| ||||||    
T  42002461 tgcttacttcgttcacataactatgtacctcctagaagtacaccctcaatatataaacactactaatgt 42002529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 23976782 - 23976708
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttcta 263  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| |||||| | ||||||||| |||||||||    
T  23976782 attgtgttccaaaatattctaaattgcattccaaaatattttagcaaaacttgagaactaagaaaacactttcta 23976708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 32460765 - 32460695
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactt 259  Q
    |||||||||||||||||||||||||||| |||||| |||||||| | || ||||||||||||||| |||||    
T  32460765 attgtgttccaaaatattctagattgcgctccaaaatattttaggaaaatttggggactaagaaaacactt 32460695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 36949600 - 36949677
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataa 267  Q
    ||||||||||||||||||||| ||||| | | |||| ||||||||| || ||||| |||||||||||||||||||||||    
T  36949600 attgtgttccaaaatattctaaattgcatccgaaat-attttagcaaaatttgggaactaagaaagcactttctaataa 36949677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 13300558 - 13300482
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      ||||||||||||||||||||||||||||||| ||||||    
T  13300558 agtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactactaatgt 13300482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 21323109 - 21323033
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      ||||||||||||||||||||||||||||||| ||||||    
T  21323109 agtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactactaatgt 21323033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 24435396 - 24435314
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttcc--aaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||||  ||| ||| ||||   | ||||| |||||||||||||||||| |||||||    
T  24435396 attgtgttccaaaatattctagattgcgttccaaaaaatatcttagtcaatcttggagactaagaaagcactttcaaataatg 24435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 27425242 - 27425313
Alignment:
Q  198 caaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||| ||||||||||| |||| ||||||| || ||||| |||| ||||||| |||||||||||||||    
T  27425242 caaaatattttagattgcgtttcaaaatattttaacaaaacttagggagtaagaaaacactttctaataatg 27425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 3666900 - 3666956
Alignment:
Q  344 agtgcttacttcgttcacataactatgta--cctcttagaggtacacccccactata 398  Q
    ||||||||| |||||||||||| ||||||  ||| ||||||||||||||||||||||    
T  3666900 agtgcttacatcgttcacataattatgtacccctattagaggtacacccccactata 3666956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 21827227 - 21827272
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagca 234  Q
    |||||| |||||||||||||||||||||||| ||| ||||||||||    
T  21827227 attgtgctccaaaatattctagattgcgttctaaaatattttagca 21827272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 31732612 - 31732649
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  31732612 ttagaggtacacccccactatataaacactactaatgt 31732649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 223
Target Start/End: Complemental strand, 1429388 - 1429358
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaa 223  Q
    |||||||||||||||||||||||||||||||    
T  1429388 tgttccaaaatattctagattgcgttccaaa 1429358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 1428905 - 1428868
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  1428905 ttagaggtacaccccaactatataaacactattgatgt 1428868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 4237557 - 4237477
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4237557 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 4237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 4242296 - 4242216
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4242296 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 4242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Complemental strand, 4237410 - 4237339
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4237410 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 4237339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Complemental strand, 4242149 - 4242078
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4242149 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 4242078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 31448933 - 31448863
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31448933 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 31448863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 31449081 - 31449002
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  31449081 attgtgttcctaaatattctagattgcgttccaaattattttagtaaaacttggggactaagaaggcactttctaataat 31449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 43301812 - 43301742
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43301812 agtgcttacttcgttcagataactatgtacctcttagaggtacacccccactatataaacactactaatgt 43301742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 4582497 - 4582417
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  4582497 attgtgttccaaaatattctagattgcattccaaaataatttagcaaaacttggggaccaagaaagcactttttaataatg 4582417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 25367225 - 25367144
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  25367225 attgcgttctaaaatattctagattgcgttccaaaatattttcagcaaaacttggggactaagaaaacactttctaataatg 25367144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 8330603 - 8330522
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| ||||||||||||||| |||||||||||||| |||||| | || |||||||||||||||||| |||||||||||||||    
T  8330603 attgcgttccaaaatattcttgattgcgttccaaaatatttttatcaaaacttggggactaagaaaacactttctaataatg 8330522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 37772582 - 37772663
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||| |||| |||||||||||||||    
T  37772582 attgtattccaaaatattctaaattgcgttccaaaatatttttagcagaacttggggactaggaaaacactttctaataatg 37772663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 42972978 - 42973055
Alignment:
Q  188 tattgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaat 265  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| || |||||||||||| | ||| |||||||||||    
T  42972978 tattgtgttccaaaatattttagattgcgttccaaaatattttaccaaaacttggggactcaaaaaacactttctaat 42973055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 22104699 - 22104780
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| |||||||||| ||||||||    
T  22104699 attgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaagcactttttaataatg 22104780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 42973114 - 42973188
Alignment:
Q  340 ctccagtgcttacttcgttcacataactatgtacctct--tagaggtacacccccactatataaacactattaat 412  Q
    ||||||||||||||| |||||||||| ||| |||| ||  ||||||||||||||||||||||||||| |||||||    
T  42973114 ctccagtgcttacttagttcacataattatatacccctattagaggtacacccccactatataaacattattaat 42973188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 43301936 - 43301867
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||  |||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  43301936 aaaatatattagattgccttccaaattattttagcaaaacttggggactaa-aaaacactttctaataatg 43301867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 16066426 - 16066345
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    |||||| |||||||||||||||||| ||||| ||| |||||||||| ||| ||||||| ||| |||||||||| ||| ||||    
T  16066426 attgtgctccaaaatattctagattacgttctaaaatattttagcaaaacatggggacaaagaaaagcactttttaacaatg 16066345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 19391311 - 19391268
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttag 232  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  19391311 attgtgttccaaaatattctagattgcgttctaaaatattttag 19391268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 8330450 - 8330374
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||| ||||||||||||| |||||||| |      ||||||||||||||| ||||||||||||||| ||||||    
T  8330450 agtgcttatttcgttcacataattatgtacccccgttaattagaggtacacccctactatataaacactactaatgt 8330374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 37772777 - 37772814
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  37772777 ttagaggtacacccccactatataaacactactaatgt 37772814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 34817919 - 34817879
Alignment:
Q  229 ttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||| ||||||| |||||||||| |||||||||||||||    
T  34817919 ttagcaaaacttggagactaagaaaacactttctaataatg 34817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 3034521 - 3034601
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  3034521 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 3034601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 3693497 - 3693577
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  3693497 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 3693577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 8070557 - 8070637
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  8070557 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaagcactttcttataatg 8070637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 8888808 - 8888888
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  8888808 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 8888888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 8884052 - 8884128
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  8884052 tgttccaaaatattctagattgcgttccaaatcattttagcaaaacttggggactaagaaagcactttctaataatg 8884128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 3673591 - 3673662
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3673591 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 3673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 3693645 - 3693716
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3693645 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 3693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 8070704 - 8070775
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8070704 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 8070775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 8888942 - 8889012
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8888942 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 8889012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 6595647 - 6595565
Alignment:
Q  187 atattgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  6595647 atattgtgttccaaaatattttagattgcgttctaaaatattttagcaaaacttggggactaagaaagcactttctaacaatg 6595565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 8884196 - 8884266
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8884196 agtgcttacttcgttctcataactatgtacctcttagaggtacacccccactatataaacactactaatgt 8884266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 414
Target Start/End: Original strand, 3034669 - 3034740
Alignment:
Q  343 cagtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  3034669 cagtgcttacttcgttcacataactatataccttttagaggtacacccccactatataaacactactaatgt 3034740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10585408 - 10585327
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  10585408 attgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 10585327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 8197472 - 8197552
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  8197472 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaagcactttttaataatg 8197552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 30248 - 30328
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||| ||||| ||||||||||||| ||||||||    
T  30248 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaactttgggaccaagaaagcactttttaataatg 30328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 8223955 - 8224035
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||| |||||| ||||||||    
T  8223955 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaaacactttttaataatg 8224035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 18349849 - 18349769
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| |||| |||||||| ||||||||    
T  18349849 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagacagcactttttaataatg 18349769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 3673449 - 3673523
Alignment:
Q  195 ttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||||||  |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  3673449 ttcccaaatatttcagattgtgttccaaattattttagcaaaacttggggactaagaaaacactttctaataatg 3673523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 12898964 - 12898885
Alignment:
Q  190 ttgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| || || ||||||||||||  ||||||||||||||    
T  12898964 ttgtgtttcgaaatattctagattgcgttccaaaatattttagcaaaatttagggactaagaaaaaactttctaataatg 12898885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 14424933 - 14424852
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| |||||||||| ||||||||    
T  14424933 attgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaagcactttttaataatg 14424852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 631827 - 631898
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||||  ||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  631827 ccaaaatatttcagattgtattccaaaatattttagcaaaacttggggactaagaaaacactttctaataat 631898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 16056054 - 16056135
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttcc-aaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||| |||||||||||||| ||| |||| |||   |||||| |||||||||| ||||||||||||||||    
T  16056054 attgtgttccaaaatatcctagattgcgttccaaaaatattctagtcaaacttgtggactaagaatgcactttctaataatg 16056135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 35456087 - 35456017
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||| |||| |||| |||| | |||||| ||||||||| |||||||||||||||    
T  35456087 ccaaaatattctagattgcgttcaaaat-atttcagcaaagcttggg-actaagaaaacactttctaataatg 35456017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 51923224 - 51923295
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcacttt 260  Q
    |||||||||||||||||| |||||||  ||| ||| || ||||||| ||||||||| | |||||||||||||    
T  51923224 attgtgttccaaaatattatagattgtattctaaaataatttagcaaaacttgggggccaagaaagcacttt 51923295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 631995 - 632032
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  631995 ttagaggtacacccccactatataaacactactaatgt 632032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 10585214 - 10585177
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10585214 ttagaggtacacccccactatataaacactactaatgt 10585177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 16043383 - 16043460
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaat-tattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||||||||||||||||| |||||||  ||||  ||   |||||||||||||| |||||||||||||||||||    
T  16043383 tgtttcaaaatattctagattgcattccaaaaatattcaagtcaaacttggggactaaaaaagcactttctaataatg 16043460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 387
Target Start/End: Original strand, 429462 - 429505
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtaca 387  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||    
T  429462 agtgcttactccgttcacataattatgcacctcttagaggtaca 429505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 16023374 - 16023447
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagc--ataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||||  ||||||||||||||| |||||||||  | ||||  |||||||||||| || |||||||||||    
T  16023374 ccaaaatatttcagattgcgttccaaaatattttagcaaaaaactcagggactaagaaaacattttctaataat 16023447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 429289 - 429369
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||| ||||||||||  | |||| |||||||| |||||||||  ||  || |||||| |||| |||||||||||||||    
T  429289 attgtgtaccaaaatatttcaaattgtgttccaaaatattttagccaaatctgtggactacgaaaacactttctaataatg 429369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 35458187 - 35458231
Alignment:
Q  225 tattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| | |||| ||||||||||||| |||||||||||||||    
T  35458187 tattttagaaaaactcggggactaagaaaacactttctaataatg 35458231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 45903758 - 45903718
Alignment:
Q  229 ttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||| || ||||||||||||||| |||||||||||||||    
T  45903758 ttagcaaaatttggggactaagaaaacactttctaataatg 45903718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 53358969 - 53359041
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||  | |||| |||||||| ||||||| || ||||||||||| ||||||  ||||| ||||||||    
T  53358969 ccaaaatatttcatattgtgttccaaaatattttatcaaaacttggggacgaagaaaatactttttaataatg 53359041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10159932 - 10159852
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  10159932 attgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaagtactttctaataatg 10159852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 28856005 - 28856087
Alignment:
Q  187 atattgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  28856005 atattgtattccaaaatattctagattgcgttccaaaatattttagcaaaacttggggactaaaaaagcactttctaataatg 28856087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 30659029 - 30659102
Alignment:
Q  196 tccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30659029 tccaaaatattatagattgcgttccaaattattttagcaaaacttggggactaagaaagcactttctaataatg 30659102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 30659170 - 30659240
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30659170 agtgcttacttcgttcaaataactatgtacctcttagaggtacacccccactatataaacactactaatgt 30659240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 10159785 - 10159717
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaat 412  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10159785 agtgcttacttcgtccacataactatgtacctcttagaggtacacccccactatataaacactactaat 10159717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 17452803 - 17452723
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||| ||||| ||||| |||||| |||||||||||||||    
T  17452803 attgtgttccaaaatattctagattgcgttctaaaatatttcagcaaaacttagggaccaagaaaacactttctaataatg 17452723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 34070439 - 34070509
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactt 259  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||    
T  34070439 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaagcactt 34070509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 6297132 - 6297051
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||||||||||||||||||||||||||||| |||||| || | |||||||| ||||||||| |||||||||||||||    
T  6297132 attgcgttccaaaatattctagattgcgttccaaaatattttcagtaaaacttgggaactaagaaaacactttctaataatg 6297051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 24292666 - 24292586
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||| |||||| ||||||||    
T  24292666 attgtattccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaaacactttttaataatg 24292586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 35602519 - 35602590
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||||||||    
T  35602519 ccaaaatattatagattgcgttccaaat-attttagcaaaacttggggactaaaaaaacactttctaataatg 35602590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 42249228 - 42249307
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||| || ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  42249228 attgtgttccaaaatattctagattgcgatctaaaataatttagcaaaacttggggac-aagaaagcactttttaataatg 42249307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 30635656 - 30635735
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||  ||||||||||||||| ||||| ||||    
T  30635656 attgtgttctaaaatattctagattgctttcaaaaatattttagcataacttaaggactaagaaagcaccttctattaat 30635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 22845261 - 22845335
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaat 265  Q
    ||||||||||||||||||||| |||| ||| |||| |||||||||| |||  |||||||||||||||||||||||||    
T  22845261 attgtgttccaaaatattctacattgtgtttcaaaatattttagcaaaac--ggggactaagaaagcactttctaat 22845335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 7559547 - 7559467
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||| ||| |||||||| ||| |||||||||| ||||||||||| ||||||  ||||| ||||||||    
T  7559547 attgtgttccaaaatattttagtttgcgttctaaaatattttagcaaaacttggggacaaagaaaatactttttaataatg 7559467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 24285988 - 24285909
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||| ||||||||||||| ||| || | ||||| ||||||||||| ||||||||||||| ||||||||    
T  24285988 attgtattccaaaatatgctagattgcgttctaaaataatgtagcaaaacttggggaccaagaaagcacttt-taataatg 24285909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 25375784 - 25375864
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||| | ||||||||||  |||||| |||||| ||||||||    
T  25375784 attgtgttccaaaatattatagattgcattctaaaatattttagtaaaacttggggagaaagaaaacactttttaataatg 25375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 30640220 - 30640148
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||  | |||| |||||||| |||||||||| ||||||||||||| |||| |||||||||||||||    
T  30640220 ccaaaatatttcaaattgtgttccaaaatattttagcaaaacttggggactacgaaaacactttctaataatg 30640148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 19588752 - 19588682
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||| ||| ||||| ||| |||||| |  ||||||||||||||||||||||||||||||| ||||||    
T  19588752 agtgcttaattcattcacgtaattatgtatcatttagaggtacacccccactatataaacactactaatgt 19588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 35602629 - 35602694
Alignment:
Q  349 ttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||| ||||||||| |||||| || ||||||||||||| ||| ||||||||||||| ||||||    
T  35602629 ttacttcattcacataattatgtatcttttagaggtacacctccaatatataaacactactaatgt 35602694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 17327912 - 17327988
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattattttagcataactt-ggggactaagaaagcactttctaataat 268  Q
    |||||||||||||| |||||||||||| ||| |||||||| | ||||| |||||| || ||| ||||||||||||||    
T  17327912 tgttccaaaatattttagattgcgttcaaaaatattttagtaaaacttgggggacaaaaaaaacactttctaataat 17327988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 30629727 - 30629799
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||  ||||| || |||||| |||||||||| || ||||||||||||||| ||||| |||||||||    
T  30629727 ccaaaatatttcagattacgatccaaaatattttagcaaaatttggggactaagaaaacacttcctaataatg 30629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 6296945 - 6296908
Alignment:
Q  377 ttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6296945 ttagaggtacacccccactatataaacactactaatgt 6296908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 377496 - 377432
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaa 253  Q
    |||||||| ||||||||||||||||| |||| ||| |||| ||||| ||| ||||||| ||||||    
T  377496 attgtgtttcaaaatattctagattgtgttctaaaatattctagcaaaacatggggacaaagaaa 377432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 6857203 - 6857275
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||| |||||||| ||| ||| || ||||||| || |||||||| ||||||||||| | ||||||||    
T  6857203 ccaaaatattttagattgcattcaaaaataatttagcaaaaattggggaccaagaaagcactctttaataatg 6857275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 407
Target Start/End: Original strand, 30637203 - 30637234
Alignment:
Q  376 cttagaggtacacccccactatataaacacta 407  Q
    ||||||||||||||||||||||||||||||||    
T  30637203 cttagaggtacacccccactatataaacacta 30637234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 17452582 - 17452510
Alignment:
Q  340 ctccagtgcttacttcgttcacataactatgta-cctcttagaggtacacccccactatataaacactattaat 412  Q
    ||||| |||||||||||||||||||| |||||| ||  ||| |||||||  |||||||||||||||||| ||||    
T  17452582 ctccaatgcttacttcgttcacataattatgtatccctttaaaggtaca-acccactatataaacactactaat 17452510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 8950 - 8880
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8950 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactactaatgt 8880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 9087 - 9016
Alignment:
Q  199 aaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  9087 aaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 9016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 11017285 - 11017205
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||    
T  11017285 attgtgttccaaaatattctagattacgttccaaaatattttagcaaaacttggggactatgaaaacactttctaataatg 11017205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 47102407 - 47102487
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||| |||||||||||||||    
T  47102407 attgtgttccaaaatattctagattgcgttccaaaatattttagcaaaatttggagactaagaaaacactttctaataatg 47102487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 9650176 - 9650097
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  9650176 attgtgttccaaaatattctagattgcaatccaaaatattttagcaaaactt-gggactaagaaagcactttctaataatg 9650097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 23866754 - 23866821
Alignment:
Q  347 gcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23866754 gcttacttcattcacataactatgtacctcttagaggtacacccccattatataaacactactaatgt 23866821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 27257093 - 27257174
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  27257093 attgggttctaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 27257174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 40864609 - 40864539
Alignment:
Q  200 aaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  40864609 aaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 40864539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10499332 - 10499251
Alignment:
Q  189 attgtgttccaaaat-attctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||| |||||| |||| |||||||| |||||||||| | ||||| ||||||||||||||||||||||||||    
T  10499332 attgtgttccaaaattattctaaattgtgttccaaaatattttagcaaagcttggagactaagaaagcactttctaataatg 10499251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10504361 - 10504280
Alignment:
Q  189 attgtgttccaaaat-attctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||| |||||| |||| |||||||| |||||||||| | ||||| ||||||||||||||||||||||||||    
T  10504361 attgtgttccaaaattattctaaattgtgttccaaaatattttagcaaagcttggagactaagaaagcactttctaataatg 10504280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 9650029 - 9649959
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  9650029 agtgcttacttcattcacataactatgtacctcttagatgtacacctggactatataaacactactaatgt 9649959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 19097277 - 19097358
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| |||||||||| ||||||||    
T  19097277 attgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaagcactttttaataatg 19097358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 11247429 - 11247511
Alignment:
Q  187 atattgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||  |||||||| | |||| ||||||||||  |||||||||| |||||||| ||||||||| |||||||||||||||    
T  11247429 atattgtgcaccaaaataatttagactgcgttccaagatattttagcaaaacttgggtactaagaaaacactttctaataatg 11247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 838562 - 838481
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||| ||| ||| ||| ||| |||||| ||||||||    
T  838562 attgtgttccaaaatattctagattgtgttccaaaatattttagcaaaacatggagacaaagaaaatcactttttaataatg 838481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 1203742 - 1203661
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||| ||| ||| ||| ||| |||||| ||||||||    
T  1203742 attgtgttccaaaatattctagattgtgttccaaaatattttagcaaaacatggagacaaagaaaatcactttttaataatg 1203661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 407
Target Start/End: Original strand, 47102560 - 47102624
Alignment:
Q  345 gtgcttacttcgttcacataactatgtacctct--tagaggtacacccccactatataaacacta 407  Q
    ||||||||||||||||||||| |||||||| ||  |||||||||||||||| |||||||||||||    
T  47102560 gtgcttacttcgttcacataattatgtacccctattagaggtacacccccaatatataaacacta 47102624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 36477861 - 36477916
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttgggg 244  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| |||||||||    
T  36477861 attgtgttccaaaatattctagattgcgttctaaagtaatttagcaaaacttgggg 36477916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 8076911 - 8076953
Alignment:
Q  227 ttttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  8076911 ttttatcataacttggggactaagaaagcactttctaataatg 8076953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 9009023 - 9009092
Alignment:
Q  200 aaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||| ||||||| |||||||| |||||||||  ||||| | |||||||||| |||||||||||||||    
T  9009023 aaatattatagattgtgttccaaaatattttagctaaactttgagactaagaaaacactttctaataatg 9009092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 27257241 - 27257317
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      |||||| |||||||||||||||||||||||| ||||||    
T  27257241 agtgcttacttcgttcacataattatgtacccccattaattagagatacacccccactatataaacactactaatgt 27257317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 40864471 - 40864395
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      ||||||||||||| ||||||||||||||||| ||||||    
T  40864471 agtgcttacttcgttcacataattatgtacccccattaattagaggtacacctccactatataaacactactaatgt 40864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 1044245 - 1044304
Alignment:
Q  344 agtgcttacttcgttcacataactatgta-cctcttagaggtacacccccactatataaa 402  Q
    |||||||||||||||||||||| || ||| |||||||||| |||||||||| ||||||||    
T  1044245 agtgcttacttcgttcacataattacgtaccctcttagagctacacccccattatataaa 1044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 1044108 - 1044174
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaat 265  Q
    ||||||||  ||||||||||||||| |||||||| | ||||||   |||||||||||||||||||||    
T  1044108 aaaatatttcagattgcgttccaaaatattttagtaaaacttgacaactaagaaagcactttctaat 1044174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 8077029 - 8077095
Alignment:
Q  349 ttacttcgttcacataactatgtacc-tcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||| |||||||||| |||||||| | ||||||||||||||||| |||||||| |||| ||||||    
T  8077029 ttactttgttcacataattatgtaccctattagaggtacacccccaatatataaatactactaatgt 8077095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 8954469 - 8954387
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttag-cataacttggggactaag-aaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||| |||| ||| |||||||| || ||| ||| ||| ||| |||||||||| ||||||||    
T  8954469 attgtgttccaaaatattctagattgtgttctaaaatattttagccaaaacatggagacaaagaaaagcactttttaataatg 8954387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 10488534 - 10488452
Alignment:
Q  187 atattgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||  ||||| ||||  |||||| |||| ||  |||||||||| |||||||||||||||||| || ||||||||||||    
T  10488534 atattgtgcaccaaagtatttcagattgtgttctaagatattttagcaaaacttggggactaagaaaacattttctaataatg 10488452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 10532053 - 10531995
Alignment:
Q  211 attgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||| || ||||||| | ||||| |||||||||| |||||||||||||||    
T  10532053 attgcgttccaaaatagtttagcaaagcttggagactaagaaaacactttctaataatg 10531995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 845718 - 845673
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagca 234  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  845718 attgtgttccaaaatattctagattgtgttctaaaatattttagca 845673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 853099 - 853054
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagca 234  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  853099 attgtgttccaaaatattctagattgtgttctaaaatattttagca 853054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 1211103 - 1211058
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagca 234  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  1211103 attgtgttccaaaatattctagattgtgttctaaaatattttagca 1211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 11296907 - 11296967
Alignment:
Q  208 tagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||||| |||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  11296907 tagactgcgtttcaaaatattttagca-aacttgggtactaagaaatcactttctaataatg 11296967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 13343627 - 13343562
Alignment:
Q  203 tattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||| |||| ||| |||| |||||||||| | ||||| |||||||||||||||||| ||||||    
T  13343627 tattctaaattgtgtttcaaaatattttagcaaatcttggagactaagaaagcactttcgaataat 13343562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 13346575 - 13346502
Alignment:
Q  189 attgtgttccaaaat-attctagattgcgttccaaattattttagcataacttggggactaagaaagcactttc 261  Q
    |||||| |||||||| |||||| |||| ||| |||| |||||||||| | ||||| ||||||||||||||||||    
T  13346575 attgtggtccaaaattattctaaattgtgtttcaaaatattttagcaaatcttggagactaagaaagcactttc 13346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 7838971 - 7839041
Alignment:
Q  198 caaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||| |||||||| ||| ||| |||||||||| ||||| |||| ||| |||  |||||||||||||    
T  7838971 caaaatattttagattgcattcgaaaatattttagcaaaacttagggattaaaaaaatactttctaataat 7839041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 390
Target Start/End: Original strand, 9009159 - 9009205
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacaccc 390  Q
    ||||||||||| |||||||||| |||| ||| |||||||||||||||    
T  9009159 agtgcttactttgttcacataattatgcaccccttagaggtacaccc 9009205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 10488344 - 10488262
Alignment:
Q  187 atattgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||  ||||| ||||  |||||| |||| ||| |||||||||| ||| |||||||||||||| || ||| ||||||||    
T  10488344 atattgtgcaccaaagtatttcagattgtgttctaaaatattttagcaaaacctggggactaagaaaacattttgtaataatg 10488262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 40997880 - 40997834
Alignment:
Q  358 tcacataactatgtacctcttagaggtacacccccactatataaaca 404  Q
    |||||||| |||||  | |||||||||||||||||||||||||||||    
T  40997880 tcacataattatgtttcccttagaggtacacccccactatataaaca 40997834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 11289103 - 11289163
Alignment:
Q  208 tagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||||| |||  |||||||||| |||||||| ||||||||| |||||||||||||||    
T  11289103 tagactgcgtttcaagatattttagca-aacttgggtactaagaaatcactttctaataatg 11289163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 15566205 - 15566276
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||  ||||||| ||||||| ||||||| || ||||| || ||||||||| |||||||||| ||||    
T  15566205 ccaaaatatttcagattgcattccaaaatattttaacaaaactttgg-actaagaaaacactttctaaaaatg 15566276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 52135 - 52054
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  52135 attgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 52054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 47191 - 47110
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||| ||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  47191 attgtattccaaaatattctagattgcgttctaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 47110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 51984 - 51908
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      ||||||||||||||| ||||||||||||||| ||||||    
T  51984 agtgcttacttcgttcacataattatgtacccccattaattagaggtacacccctactatataaacactactaatgt 51908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 6111979 - 6111898
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||| |||||||||||||||    
T  6111979 attgtgttccaaaatattctagattgcgttccgaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 6111898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 14074025 - 14074105
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||| |||||||| ||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  14074025 attgtgttccaaaatattatagattgcattctaaaataatttagcaaaacttggggaccaagaaagcactttttaataatg 14074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 2862743 - 2862673
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||  ||||||||||| ||| |||||||||| |||||| ||||||||||| |||||||||||||||    
T  2862743 aaaatatttcagattgcgttctaaaatattttagcaaaacttgaggactaagaaaacactttctaataatg 2862673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 2882046 - 2881976
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||  ||||||||||| ||| |||||||||| |||||| ||||||| |||||||||||||||||||    
T  2882046 aaaatatttcagattgcgttctaaaatattttagcaaaacttgaggactaaaaaagcactttctaataatg 2881976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 2759326 - 2759254
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc--ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| ||||||||||  |||||||| |||||||| |||||||| |||| ||||||    
T  2759326 agtgcttacttcgttcacataattatgtacctctattagaggtgcacccccattatataaatactactaatgt 2759254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 26981577 - 26981658
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| ||| |||||| ||||||||    
T  26981577 attgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaatcactttttaataatg 26981658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 27073963 - 27074040
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| ||| |||||| ||||||||    
T  27073963 tgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaatcactttttaataatg 27074040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 15645697 - 15645756
Alignment:
Q  344 agtgcttacttcgttcacataactatgta-cctcttagaggtacacccccactatataaa 402  Q
    |||||||||||||||||||||| |||||| || ||||||||| ||||| |||||||||||    
T  15645697 agtgcttacttcgttcacataattatgtagccgcttagaggtgcaccctcactatataaa 15645756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 28963941 - 28963868
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacc---tcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||| | ||| ||||||||   ||||||||||||||||||  ||||||||||||| ||||||    
T  28963941 agtgcttacttcgttctcttaattatgtaccccctcttagaggtacacccccgatatataaacactactaatgt 28963868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 2862609 - 2862552
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatata 400  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||||| ||||||||    
T  2862609 agtgcttactttgttcacataattatgtacccctttagaggtacacccctactatata 2862552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 2881912 - 2881855
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc-ttagaggtacacccccactatata 400  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||||| ||||||||    
T  2881912 agtgcttactttgttcacataattatgtacccctttagaggtacacccctactatata 2881855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 28964068 - 28964005
Alignment:
Q  202 atattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaat 265  Q
    ||||| |||||||| ||||||| |||||||||| | |||  |||||||||||||| ||||||||    
T  28964068 atattttagattgcattccaaaatattttagcaaagcttaaggactaagaaagcaatttctaat 28964005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 7902329 - 7902248
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  7902329 attgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 7902248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 13521201 - 13521122
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  13521201 attgtgttccaaaatattctagattgcaatccaaaatattttagcaaaactt-gggactaagaaagcactttctaataatg 13521122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 39320439 - 39320519
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||||| ||| |||||||||||||||    
T  39320439 attgtgttccaaaatattctagattacgttccaaaatattttagcaaaatttggggactaaaaaaacactttctaataatg 39320519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 3997283 - 3997202
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  3997283 attgtattccaaaatattctagattgctttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 3997202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 34561280 - 34561361
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||| |||||||| |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  34561280 attgcgttctaaaatattttagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 34561361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 41817667 - 41817744
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattat-tttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||||||||||||||| |||||||| ||| ||||||| ||||| |||||||||||| |||||||||||||||    
T  41817667 tgttccaaaatattctagattgtgttccaaaatatatttagcaaaacttagggactaagaaaacactttctaataatg 41817744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 15799350 - 15799271
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| |||||| ||||||||||||||| ||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  15799350 attgtgtttcaaaatgttctagattgcgttcaaaaatattttagca-aaattggggactaagaaaacactttctaataatg 15799271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 13521054 - 13520984
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  13521054 agtgcttacttcattcacataactatgtacctcttagatgtacacctggactatataaacactactaatgt 13520984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 52742467 - 52742397
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||  ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||    
T  52742467 aaaatatttgagattgcgttccaaaatatttaagcaaaacttggggactaagaaagcactttctagtaatg 52742397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 41817811 - 41817881
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctct--tagaggtacacccccactatataaacactattaat 412  Q
    |||||||||||||||||||||| |||||||| ||  ||||| |||||||||||||||||||||||| ||||    
T  41817811 agtgcttacttcgttcacataattatgtacccctattagagatacacccccactatataaacactactaat 41817881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 3992841 - 3992765
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      ||||||||||||||||||||||||||||||| ||||||    
T  3992841 agtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactactaatgt 3992765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 26035078 - 26035159
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||| ||| ||| ||| ||| |||||||||| ||||||||    
T  26035078 attgtgttccaaaatattctagattgcattctaaaatattttagcaaaacatggagacaaagaaaagcactttttaataatg 26035159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 31297724 - 31297659
Alignment:
Q  200 aaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaat 265  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||||| |||||||| |||||||||||    
T  31297724 aaatattttagattgtgttccaaaatattttagcaaaacttgggggctaagaaaacactttctaat 31297659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 3310090 - 3310162
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||| ||||||| |||||||| ||||||| || |||||| | ||||||||| |||||||||||||||    
T  3310090 ccaaaatattttagattgggttccaaaatattttaacaaaacttgagaactaagaaaacactttctaataatg 3310162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 9190751 - 9190671
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| |||| ||||||||||||||||| ||| || |||  || ||||||||||| ||||||||||||| ||||||||    
T  9190751 attgtgtttcaaagtattctagattgcgttctaaaataattttacaaaacttggggaccaagaaagcactttttaataatg 9190671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 39320590 - 39320662
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacc--tcttagaggtacacccccactatataaacactattaatgt 414  Q
    |||| ||||||||||||||||| ||||| ||  | |||||||||||||||||||||||||||| || ||||||    
T  39320590 agtgtttacttcgttcacataattatgtgcccatattagaggtacacccccactatataaacattactaatgt 39320662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 14868008 - 14867926
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttc-caaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||| |||  || ||| ||| |||||||||| ||||||||    
T  14868008 attgtgttccaaaatattctagattgcgttctaaaaatattttagcaaaacaaggagacaaagaaaagcactttttaataatg 14867926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 42314828 - 42314758
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||| ||| ||| ||| |||||| |||||  ||| ||||||| |||||||||||||||    
T  42314828 aaaatattctagattgcattctaaagtatattagcaaaacttaaggattaagaaaacactttctaataatg 42314758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 1150545 - 1150492
Alignment:
Q  215 cgttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||||| |||||||||| |||||||| | ||||||| ||||||||||||||    
T  1150545 cgttccaaaatattttagcaaaacttgggaattaagaaaacactttctaataat 1150492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 34561429 - 34561505
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||| ||||||||| |||||||| |      |||||||||||||||||||||||||| |||| ||||||    
T  34561429 agtgcttacttcattcacataattatgtacccccattaattagaggtacacccccactatataaatactactaatgt 34561505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 9184912 - 9184832
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| |||| ||||||||||||||||| ||| || |||  || || |||||||| |||||| |||||| ||||||||    
T  9184912 attgtgtttcaaagtattctagattgcgttctaaaataattttacaaaatttggggaccaagaaaacactttttaataatg 9184832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 32545780 - 32545832
Alignment:
Q  216 gttccaaattattttagcataacttggggactaagaaagcactttctaataat 268  Q
    |||| |||||||||||||  ||||||| |||||||||| ||||||||||||||    
T  32545780 gttcaaaattattttagctaaacttggagactaagaaaacactttctaataat 32545832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 52742317 - 52742258
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctcttagaggtacacccccactatataaaca 404  Q
    ||||||||||||||| ||||||||||| ||| ||| |||||||| ||| ||||||||||||    
T  52742317 agtgcttacttcgtttacataactatgaaccccttcgaggtaca-ccctactatataaaca 52742258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 12383524 - 12383481
Alignment:
Q  225 tattttagcataacttggggactaagaaagcactttctaataat 268  Q
    ||||||| || |||||||||||||||||| ||||||||||||||    
T  12383524 tattttaccaaaacttggggactaagaaaacactttctaataat 12383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 14891422 - 14891392
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttc 219  Q
    |||||||||||||||||||||||||||||||    
T  14891422 attgtgttccaaaatattctagattgcgttc 14891392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 31297593 - 31297533
Alignment:
Q  346 tgcttacttcgttcacataactatgtacctc--ttagaggtacacccccactatataaaca 404  Q
    |||||||||||||||| |||  ||||||| |  ||| ||||||||||||||||||||||||    
T  31297593 tgcttacttcgttcacttaagaatgtacccccattaaaggtacacccccactatataaaca 31297533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 59281 - 59361
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataat 268  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||    
T  59281 attgcgttccaaaatattctagattgcgttccaaaatattttcagcaaaacttggggactaagaaaacactttctaataat 59361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 63483 - 63563
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataat 268  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||    
T  63483 attgcgttccaaaatattctagattgcgttccaaaatattttcagcaaaacttggggactaagaaaacactttctaataat 63563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 59430 - 59506
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||| ||||||||| |||||||| |      |||||||||||||||||||||||||||| || ||||||    
T  59430 agtgcttacttcattcacataattatgtacccccattaattagaggtacacccccactatataaacattactaatgt 59506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 63632 - 63708
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||| ||||||||| |||||||| |      |||||||||||||||||||||||||||| || ||||||    
T  63632 agtgcttacttcattcacataattatgtacccccattaattagaggtacacccccactatataaacattactaatgt 63708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 192821 - 192741
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  192821 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaagcactttttaataatg 192741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 49181 - 49100
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaatta-ttttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||| |||||||||||||||    
T  49181 attgtattccaaaatattctagattgcgttccaaaatacttttagcaaaacttggagactaagaaaacactttctaataatg 49100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 34942 - 34861
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattatttt-agcataacttggggactaagaaagcactttctaataatg 269  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||    
T  34942 attgcgttctaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaacactttctaataatg 34861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 34793 - 34717
Alignment:
Q  344 agtgcttacttcgttcacataactatgtacctc------ttagaggtacacccccactatataaacactattaatgt 414  Q
    |||||||||||||||||||||| |||||||| |      ||||||||||||||||||||||||||||||||||||||    
T  34793 agtgcttacttcgttcacataattatgtacccccattaattagaggtacacccccactatataaacactattaatgt 34717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 149453 - 149534
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaatta-ttttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||| |||||||||||||||    
T  149453 attgtattccaaaatattctagattgcgttccaaaatacttttagcaaaacttggagactaagaaaacactttctaataatg 149534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 65310 - 65390
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| |||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  65310 attgtgttacaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaagcactttttaataatg 65390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 81558 - 81638
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||| |||||||||||||||||||||| ||| || ||||||| ||||||||||| ||||||||||||| ||||||||    
T  81558 attgtgttacaaaatattctagattgcgttctaaaataatttagcaaaacttggggaccaagaaagcactttttaataatg 81638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 144 - 224
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||| |||||| |||| ||||||||| ||| ||||||||    
T  144 attgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttgaggaccaagaaagcattttttaataatg 224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 24498 - 24418
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||| ||||||||||||||||| ||| || ||||||| ||| ||||||| |||||| |||||| ||||||||    
T  24498 attgtgttccaaagtattctagattgcgttctaaaataatttagcaaaacctggggaccaagaaaacactttttaataatg 24418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 473 - 398
Alignment:
Q  195 ttccaaaatattctagattgcgttccaaatta-ttttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||||||| ||||||||||||| || |||||||| ||||| |||||||||||| || ||||||||||||    
T  473 ttccaaaatattctatattgcgttccaaaatatttttagcaaaacttagggactaagaaaacattttctaataatg 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 3551 - 3470
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||| ||| ||| ||| ||| |||||||||| ||||||||    
T  3551 attgtgttccaaaatattctagattgcgttctaagatattttagcaaaacatggagacaaagaaaagcactttttaataatg 3470  T

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Target: scaffold0357; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 13135 - 13058
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    ||||||||| | ||||||||||||||| ||| |||||||||| ||| ||| ||| ||| ||| |||||| ||||||||    
T  13135 tgttccaaattnttctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaaacactttttaataatg 13058  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 83786 - 83858
Alignment:
Q  197 ccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    ||||||||||  ||||||||||||||| |||| ||||| || |||| || |||||||||||||||||||||||    
T  83786 ccaaaatatttcagattgcgttccaaaatattctagcaaaatttggagattaagaaagcactttctaataatg 83858  T

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Target: scaffold1910 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 734 - 815
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataatg 269  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||| ||| ||||||| ||| |||||||||| ||| ||||    
T  734 attgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaagcactttttaacaatg 815  T

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Target: scaffold0628 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 406
Target Start/End: Original strand, 7458 - 7522
Alignment:
Q  344 agtgcttacttcgttcacataactatgta--cctcttagaggtacacccccactatataaacact 406  Q
    |||||||||||||||||||||| ||||||  ||| ||||||||||| |||||| |||||||||||    
T  7458 agtgcttacttcgttcacataattatgtacccctgttagaggtacaaccccacgatataaacact 7522  T

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Target: scaffold0628; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 7309 - 7358
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggacta 248  Q
    ||||||||||||||||| ||||||| |||||||||| | |||||||||||    
T  7309 aaaatattctagattgccttccaaaatattttagcaaagcttggggacta 7358  T

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Target: scaffold0628; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 5591 - 5655
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaa 253  Q
    |||||||| ||||| ||||| |||||| ||||||| |||||||||| | ||||||||||| ||||    
T  5591 attgtgttgcaaaacattctcgattgccttccaaaatattttagcaaagcttggggactacgaaa 5655  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 200078 - 200142
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaagaaa 253  Q
    |||||||| |||||||||||||||||||||| ||| |||| ||||| ||| ||||||| ||||||    
T  200078 attgtgtttcaaaatattctagattgcgttctaaaatattctagcaaaacatggggacaaagaaa 200142  T

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Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 8799 - 8724
Alignment:
Q  193 tgttccaaaatattctagattgcgttccaaattattttagcataacttggggactaag-aaagcactttctaataa 267  Q
    |||||||||||||| |||||||||||| ||| |||||||||| ||| ||| ||| ||| |||||||||| ||||||    
T  8799 tgttccaaaatattttagattgcgttctaaaatattttagcaaaacatggagacaaagaaaagcactttttaataa 8724  T

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Target: scaffold0131 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 8453 - 8524
Alignment:
Q  198 caaaatattctagattgcgttccaaattattttagcataacttggggactaagaaagcactttctaataatg 269  Q
    |||||||||  |||||| ||| |||| |||||||||| |||||||||||||||||| || ||| ||||||||    
T  8453 caaaatatttcagattgtgtttcaaactattttagcaaaacttggggactaagaaaacattttttaataatg 8524  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 71992 - 72043
Alignment:
Q  189 attgtgttccaaaatattctagattgcgttccaaattattttagcataactt 240  Q
    |||||||||||||||||| |||||||||||  ||| ||||||||||||||||    
T  71992 attgtgttccaaaatattatagattgcgtttaaaaatattttagcataactt 72043  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 23010 - 22956
Alignment:
Q  199 aaaatattctagattgcgttccaaattattttagcataacttggggactaagaaa 253  Q
    ||||||||  ||||||||||| ||| |||||||| | ||||||||||||||||||    
T  23010 aaaatatttcagattgcgttctaaaatattttagtaaaacttggggactaagaaa 22956  T

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