View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20151_low_47 (Length: 418)

Name: NF20151_low_47
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20151_low_47
NF20151_low_47
[»] chr5 (25 HSPs)
chr5 (229-404)||(10400106-10400281)
chr5 (143-226)||(10399985-10400069)
chr5 (20-143)||(10399884-10400007)
chr5 (21-107)||(21236362-21236447)
chr5 (20-107)||(7085626-7085712)
chr5 (20-107)||(8484661-8484747)
chr5 (20-107)||(27498731-27498817)
chr5 (20-107)||(15641106-15641191)
chr5 (20-107)||(19456211-19456296)
chr5 (20-107)||(22392799-22392885)
chr5 (28-107)||(22693054-22693132)
chr5 (20-107)||(30485939-30486025)
chr5 (20-107)||(35425124-35425210)
chr5 (20-107)||(41351104-41351189)
chr5 (22-107)||(18207320-18207404)
chr5 (20-107)||(10869565-10869651)
chr5 (32-107)||(24158166-24158240)
chr5 (24-107)||(31287946-31288028)
chr5 (20-107)||(32059440-32059526)
chr5 (20-107)||(11926501-11926588)
chr5 (20-107)||(12317155-12317240)
chr5 (19-107)||(33709503-33709590)
chr5 (20-63)||(15971165-15971208)
chr5 (46-107)||(25750613-25750673)
chr5 (46-107)||(37495191-37495251)
[»] chr4 (23 HSPs)
chr4 (27-107)||(46714511-46714590)
chr4 (20-107)||(27528795-27528881)
chr4 (20-107)||(33696279-33696365)
chr4 (20-107)||(34844758-34844844)
chr4 (20-107)||(40058852-40058938)
chr4 (20-107)||(44343625-44343711)
chr4 (20-106)||(52983730-52983815)
chr4 (20-107)||(32986308-32986394)
chr4 (20-107)||(34723910-34723996)
chr4 (20-105)||(20077986-20078070)
chr4 (27-106)||(45302954-45303032)
chr4 (20-107)||(19660532-19660618)
chr4 (20-107)||(20566461-20566547)
chr4 (20-107)||(27574429-27574515)
chr4 (20-98)||(9517650-9517727)
chr4 (20-107)||(5609202-5609288)
chr4 (20-106)||(25969504-25969587)
chr4 (20-107)||(32990546-32990632)
chr4 (24-107)||(36131510-36131592)
chr4 (20-107)||(45787704-45787790)
chr4 (20-107)||(54127342-54127428)
chr4 (49-107)||(43352339-43352396)
chr4 (46-107)||(43719087-43719147)
[»] chr6 (18 HSPs)
chr6 (20-107)||(21148511-21148596)
chr6 (20-107)||(21982321-21982406)
chr6 (20-107)||(11448982-11449068)
chr6 (20-107)||(3222636-3222721)
chr6 (20-107)||(15360098-15360184)
chr6 (20-107)||(34147457-34147543)
chr6 (20-107)||(34160073-34160159)
chr6 (20-107)||(654146-654232)
chr6 (27-106)||(9239093-9239171)
chr6 (22-107)||(9844051-9844135)
chr6 (27-107)||(9208370-9208449)
chr6 (27-107)||(11007283-11007362)
chr6 (20-107)||(1345046-1345132)
chr6 (20-107)||(9690638-9690724)
chr6 (27-107)||(14213000-14213079)
chr6 (229-278)||(1063213-1063262)
chr6 (20-64)||(17081096-17081140)
chr6 (27-107)||(28672185-28672264)
[»] chr2 (16 HSPs)
chr2 (20-107)||(35171911-35171997)
chr2 (20-107)||(31778142-31778228)
chr2 (27-107)||(15038077-15038156)
chr2 (20-107)||(11941210-11941296)
chr2 (20-107)||(44946053-44946139)
chr2 (20-107)||(36390569-36390654)
chr2 (20-107)||(41329953-41330039)
chr2 (19-107)||(25293268-25293356)
chr2 (27-107)||(28668991-28669070)
chr2 (20-107)||(30466830-30466916)
chr2 (20-107)||(33827573-33827659)
chr2 (46-107)||(6006890-6006950)
chr2 (20-64)||(5394128-5394172)
chr2 (27-107)||(6714295-6714374)
chr2 (20-64)||(19849944-19849988)
chr2 (20-100)||(36242319-36242398)
[»] chr1 (16 HSPs)
chr1 (20-107)||(7766727-7766813)
chr1 (20-107)||(4621237-4621323)
chr1 (20-107)||(15059402-15059488)
chr1 (20-107)||(24122134-24122220)
chr1 (27-107)||(23734234-23734314)
chr1 (27-107)||(23741426-23741506)
chr1 (20-106)||(17935880-17935965)
chr1 (20-107)||(7197247-7197333)
chr1 (20-107)||(8254752-8254838)
chr1 (20-107)||(9500355-9500441)
chr1 (20-107)||(24674504-24674590)
chr1 (20-103)||(1379009-1379090)
chr1 (20-107)||(22909982-22910068)
chr1 (27-106)||(34778457-34778535)
chr1 (69-107)||(45331621-45331659)
chr1 (22-63)||(33905553-33905594)
[»] chr7 (31 HSPs)
chr7 (21-107)||(27312268-27312353)
chr7 (20-107)||(22120003-22120089)
chr7 (20-107)||(40542910-40542996)
chr7 (20-106)||(22638403-22638488)
chr7 (20-107)||(2751386-2751472)
chr7 (20-107)||(3851872-3851958)
chr7 (20-107)||(7275392-7275478)
chr7 (20-107)||(17196950-17197036)
chr7 (20-107)||(21835266-21835352)
chr7 (20-107)||(23330739-23330825)
chr7 (20-106)||(19421346-19421431)
chr7 (27-107)||(31197712-31197791)
chr7 (20-107)||(41907514-41907599)
chr7 (20-107)||(11997964-11998050)
chr7 (20-107)||(18044222-18044308)
chr7 (20-107)||(2103170-2103254)
chr7 (20-107)||(654705-654790)
chr7 (20-107)||(7175862-7175948)
chr7 (20-107)||(22703601-22703687)
chr7 (20-107)||(23092211-23092297)
chr7 (36-107)||(28089950-28090020)
chr7 (20-107)||(31274029-31274114)
chr7 (20-107)||(42913513-42913599)
chr7 (28-103)||(43785303-43785377)
chr7 (69-107)||(27704164-27704202)
chr7 (21-107)||(31712902-31712987)
chr7 (20-106)||(32849706-32849791)
chr7 (74-107)||(22299970-22300003)
chr7 (27-107)||(16374116-16374195)
chr7 (20-64)||(21373825-21373869)
chr7 (20-107)||(27009474-27009561)
[»] scaffold0070 (1 HSPs)
scaffold0070 (20-107)||(40436-40521)
[»] chr8 (18 HSPs)
chr8 (20-107)||(2639411-2639497)
chr8 (20-107)||(4718760-4718846)
chr8 (20-107)||(21603345-21603431)
chr8 (20-107)||(8765526-8765612)
chr8 (20-107)||(18128628-18128714)
chr8 (20-107)||(34237655-34237741)
chr8 (20-107)||(2618301-2618387)
chr8 (20-107)||(3734623-3734709)
chr8 (20-107)||(32879394-32879480)
chr8 (20-107)||(39349371-39349457)
chr8 (20-98)||(28088401-28088478)
chr8 (20-106)||(28193589-28193674)
chr8 (20-107)||(6953008-6953093)
chr8 (20-107)||(20470032-20470117)
chr8 (20-107)||(20306023-20306109)
chr8 (20-107)||(21092656-21092742)
chr8 (20-106)||(15259407-15259492)
chr8 (20-64)||(24999349-24999393)
[»] chr3 (40 HSPs)
chr3 (20-107)||(2511297-2511383)
chr3 (20-107)||(8097279-8097365)
chr3 (20-107)||(8456150-8456236)
chr3 (20-107)||(24407372-24407458)
chr3 (20-107)||(32151535-32151621)
chr3 (20-107)||(52821636-52821721)
chr3 (20-107)||(25289715-25289800)
chr3 (20-107)||(10190742-10190828)
chr3 (20-107)||(15566500-15566585)
chr3 (20-107)||(40133449-40133535)
chr3 (20-107)||(49258262-49258348)
chr3 (37-107)||(1692961-1693030)
chr3 (20-107)||(34492575-34492661)
chr3 (20-107)||(39041852-39041938)
chr3 (20-107)||(10083819-10083905)
chr3 (20-107)||(18176887-18176973)
chr3 (20-107)||(24165715-24165800)
chr3 (20-107)||(26174224-26174310)
chr3 (20-107)||(35493022-35493108)
chr3 (20-107)||(45272416-45272502)
chr3 (20-107)||(45529755-45529840)
chr3 (20-107)||(46576459-46576545)
chr3 (20-107)||(53233911-53233996)
chr3 (20-106)||(25379872-25379957)
chr3 (21-107)||(31537838-31537923)
chr3 (20-106)||(48104988-48105073)
chr3 (20-107)||(30807153-30807239)
chr3 (27-107)||(54475799-54475878)
chr3 (20-107)||(30257735-30257821)
chr3 (20-107)||(40940936-40941022)
chr3 (20-107)||(48977499-48977585)
chr3 (20-107)||(52455649-52455735)
chr3 (27-107)||(17579135-17579215)
chr3 (74-107)||(26108442-26108475)
chr3 (46-107)||(50731237-50731297)
chr3 (46-107)||(50781557-50781617)
chr3 (46-107)||(53848434-53848494)
chr3 (20-107)||(25344058-25344143)
chr3 (75-107)||(48972714-48972746)
chr3 (27-107)||(53424177-53424255)
[»] scaffold1175 (1 HSPs)
scaffold1175 (20-107)||(2426-2512)
[»] scaffold0576 (1 HSPs)
scaffold0576 (20-107)||(5082-5168)
[»] scaffold0051 (1 HSPs)
scaffold0051 (20-107)||(52871-52957)
[»] scaffold0217 (1 HSPs)
scaffold0217 (21-107)||(7309-7394)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-107)||(39205-39289)
[»] scaffold0049 (1 HSPs)
scaffold0049 (20-107)||(66865-66951)
[»] scaffold0328 (1 HSPs)
scaffold0328 (26-107)||(13047-13127)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-107)||(161920-162006)
[»] scaffold0026 (1 HSPs)
scaffold0026 (20-64)||(97408-97452)


Alignment Details
Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 229 - 404
Target Start/End: Original strand, 10400106 - 10400281
Alignment:
Q  229 aacaccataaaacgacgaatgtaacttcaattttctttgacagttaactattattgaccctccagatccaattttgagtacttttgaaaaatgcaaagat 328  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  10400106 aacaccataaaatgacgaatgtaacttcaattttcttcaacaattaactattattaaccctccagattcaattttgagtacttttgaaaaatgcaaagat 10400205  T
Q  329 aaaaataaagtcaaataacaatatgtacgataatgtcttattttagggagtaaataaattatttttaaatgtagtt 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10400206 aaaaataaagtcaaataacaatatgtacgataatgtcttattttagggagaaaataatttatttttaaatgtagtt 10400281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 10399985 - 10400069
Alignment:
Q  143 taaaattataactttaatgatattctctttgttttctcctgatatcaaaatccaccactcttccttggatgagac-tgagttttg 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  10399985 taaaattataactttaatgatattctctttgttttctcctgatatcaaaacccaccactcttccttggatgagacttgagttttg 10400069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 10399884 - 10400007
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttttnnnnnnnntggt 119  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || ||||  ||||||| ||||||| |||  ||| ||||||||        ||||    
T  10399884 gctctgactttaaacggggcccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggatcaaatagcgagttttaaaaaaaatggt 10399983  T
Q  120 gtaaaattataactttaatgatat 143  Q
    ||||||||||||||||||||||||    
T  10399984 gtaaaattataactttaatgatat 10400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 21236447 - 21236362
Alignment:
Q  21 ctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||||||||| ||| |||||||||||| |||| | |  ||||||||||||| |||||||||||||||||||||||||    
T  21236447 ctctgactttaaacggggcccccgcaagtgggcggtgggattagtcc-cctcagattagtcgattcttgaatcggataccgagtttt 21236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 7085712 - 7085626
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||| | ||| |||||||||||| |||||| |  |||| |||||||| |||||||||||||||||||||||||    
T  7085712 gctctgactttaaacggggtccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 8484747 - 8484661
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  8484747 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 27498817 - 27498731
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  27498817 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 15641191 - 15641106
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  15641191 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttg-atcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 19456296 - 19456211
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  19456296 gctctggctttaaacggggcc-ccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 22392799 - 22392885
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| ||||||||||||  ||||| |  ||||||||||||| ||| ||| |||||||||||||||||    
T  22392799 gctctggctttaaacggggcccccgcaagtgggcggtggaattggtcc-cctcagattagtcgatttttggatcggataccgagtttt 22392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  28 tttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 30485939 - 30486025
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||  ||| ||| |||||||||||| |||||| |  |||| |||||||||||||||| |||||||||||||||||    
T  30485939 gctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcc-cctcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 35425124 - 35425210
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| | | ||| |||||||| ||||||| |||||||||||| ||||    
T  35425124 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcct-ctcggattagtcgattcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 41351189 - 41351104
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||||| |||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  41351189 gctctggctttaaacggggc-tccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 18207320 - 18207404
Alignment:
Q  22 tctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||| ||||||||| |||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  18207320 tctggctttaaacgaggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 10869651 - 10869565
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||||||| |||||||||||| |||||| |  |||| ||||||||  |||||| |||||||||| ||||||    
T  10869651 gctctggctttaaatggggcctccgcaagtgggcggtgggattggtc-ccctcggattagtcggttcttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 24158240 - 24158166
Alignment:
Q  32 aacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||| | ||||||||||||||||||| |  |||||||||||||  | ||||||||||||||||| ||||    
T  24158240 aacggggcctctgcaagtgggcggtgagattggtc-ccctcagattagtcggtccttgaatcggataccgaatttt 24158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 31288028 - 31287946
Alignment:
Q  24 tgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||| ||| |||||||||||| |||||| | |||||  |||||||  |||||| | |||||||||||||||    
T  31288028 tgactttaaacggggcccccgcaagtgggcggtgggattggtc-tcctcgaattagtcggttcttggaccggataccgagtttt 31287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 32059526 - 32059440
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| ||||||||  | |||| |||||||||||||||||    
T  32059526 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 11926588 - 11926501
Alignment:
Q  20 gctctgactttaaacggggcctcc-gtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| || | ||||||| |||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  11926588 gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 12317240 - 12317155
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||| |||| || ||| ||||||| |||| |||||  |  |||| |||||||||||||||  |||||||||||||||||    
T  12317240 gctctgactttaagcgggccccccgcaagtgggtggtgggattgatc--cctcggattagtcaattcttagatcggataccgagtttt 12317155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 33709590 - 33709503
Alignment:
Q  19 agctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||| ||||||||||| || ||  |||||||||||| |||||| |  |||| |||||||| ||||||| ||||||||||| |||||    
T  33709590 agctctggctttaaacgggacccccacaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgtgtttt 33709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 15971208 - 15971165
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattg 63  Q
    |||||||||||||||||| || ||| ||||||||||||||||||    
T  15971208 gctctgactttaaacgggacccccgcaagtgggcggtgagattg 15971165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 25750673 - 25750613
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||| ||||||||||| |  | ||||||||||| ||||||| |||||||||||||||||    
T  25750673 aagtggggggtgagattggtcc-cttcagattagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 37495191 - 37495251
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  37495191 aagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 7e-19; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 46714511 - 46714590
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| ||| |||||||||||| |||||| |  |||| ||||||||||||||||||||||||||||||||||    
T  46714511 ctttaaacggggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 27528881 - 27528795
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||| |||||||| ||| ||||||||||||||||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  27528881 gctctggctttatacggggcccccgcaagtgggcggtgagattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 33696365 - 33696279
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||| ||||||||||||||||||| | | ||| |||||||||||||||| |||||||| ||||||||    
T  33696365 gctctggctttaaatggggcccccgcaagtgggcggtgagattggtcct-ctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 34844844 - 34844758
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  34844844 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 40058938 - 40058852
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  40058938 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 44343625 - 44343711
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||||  ||| |||||||||||| |||||| |  ||||  ||||||| |||||||||||||||||||||||||    
T  44343625 gctctgactttaaacggggctcccgcaagtgggcggtgggattggtc-ccctcgaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 52983730 - 52983815
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| ||||||||||||||||    
T  52983730 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 32986308 - 32986394
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||| |  |||| || ||||| ||||||| |||||||||||||||||    
T  32986308 gctctgactttaaatggggcccccgcaagtgggcggtgggattggtc-ccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 34723910 - 34723996
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| ||||||| |||| |||||| | || || |||||||| ||||||| |||||||||||||||||    
T  34723910 gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctc-tcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 20078070 - 20077986
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtt 105  Q
    |||||| |||||||||||||| |||||||||||||||| |||| |    |||| |||||||| ||||||| |||||||||||||||    
T  20078070 gctctggctttaaacggggcccccgtaagtgggcggtgggattag-ttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 45302954 - 45303032
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagatt-ggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    ||||||| |||||||| | |||||| |||||||||| || |||| || |||||||||||||||||||||||||||||||||    
T  45302954 ctttaaatggggcctc-gcaagtggacggtgagatttggtcatc-tcggattagtcaattcttgaatcggataccgagttt 45303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 19660618 - 19660532
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| ||||| ||| |||||||||||| |||||  |  |||| |||||||| ||||||| |||||||||||||||||    
T  19660618 gctctggctttaaacagggcccccgcaagtgggcggtgggattgatcc-cctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 20566461 - 20566547
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||| ||| ||| ||||||||| || |||||| |  ||||||||||||| ||||||| |||||||| ||||||||    
T  20566461 gctctggctttaaacggagcccccgcaagtgggcgctgggattggtcc-cctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 27574429 - 27574515
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||| |||||||||||||| |||| |  |||| ||||| |||||||||| ||||||||| |||||||    
T  27574429 gctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtc-ccctcggattaatcaattcttggatcggatactgagtttt 27574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 9517727 - 9517650
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggata 98  Q
    ||||||||||||||||||||| ||| | ||||| ||||||||||| |  |||| |||||||| ||||||| ||||||||    
T  9517727 gctctgactttaaacggggcccccgcaggtgggtggtgagattggtc-ccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 5609288 - 5609202
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||| |||||| ||||| |||||  |  |||| |||||||| ||||||| |||||||||||||||||    
T  5609288 gctctggctttaaatggggcccccgcaagtggacggtgggattgatcc-cctcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 25969587 - 25969504
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| ||||||||||| || ||||||||| |||||| |||||| |  ||||  ||||||| ||||||||||||||||| ||||||    
T  25969587 gctctggctttaaacgggccc-ccgtaagtgagcggtgggattggtc--cctcgaattagtcgattcttgaatcggatactgagttt 25969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 32990546 - 32990632
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| || ||||| ||||||| |||| |||| |||||||    
T  32990546 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggactagtcgattcttggatcgaatactgagtttt 32990632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 36131592 - 36131510
Alignment:
Q  24 tgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| || |||||||||||||||| |||||| |  |||| |||||||| ||| ||  ||| |||||||||||||    
T  36131592 tgactttaaacgggacccccgtaagtgggcggtgggattggtc-ccctcggattagtcgattattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 45787790 - 45787704
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| ||||| ||| |||||| ||||| |||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  45787790 gctctggctttaaacagggcccccgcaagtggacggtgggattggtcc-cctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 54127428 - 54127342
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| ||||||||  |||||| | ||||||| |||||||    
T  54127428 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcggttcttggaccggatactgagtttt 54127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 43352396 - 43352339
Alignment:
Q  49 tgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||| ||||||||||| | ||||||||||| || ||||||||||| |||||||||||||    
T  43352396 tgggaggtgagattggtc-tcctcagattaatcgattcttgaatcagataccgagtttt 43352339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 43719147 - 43719087
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||| |||||| |||| || |||||||| ||||||| |||||||||||| ||||    
T  43719147 aagtgggcggtgggattggtcatc-tcggattagtcgattcttggatcggataccgaatttt 43719087  T

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Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 21148596 - 21148511
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| |||||||||||||||||||||||||    
T  21148596 gctctgactttaaacggggcc-ccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 21982406 - 21982321
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  21982406 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc--cctcggattagtcgattcttggatcggataccgagtttt 21982321  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 11448982 - 11449068
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| |||||||||||||||| ||||||||    
T  11448982 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 3222721 - 3222636
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  3222721 gctctgtctttaaacggggcc-ccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 15360184 - 15360098
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| || ||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  15360184 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 34147457 - 34147543
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  34147457 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 34147543  T

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Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 34160073 - 34160159
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  34160073 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 654232 - 654146
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||  ||| |||||||||||| |||||| |  |||| |||||||| ||| ||| |||||||||||||||||    
T  654232 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtc-ccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 9239093 - 9239171
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    ||||||| |||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| ||||||||||||||||    
T  9239093 ctttaaatggggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 9844051 - 9844135
Alignment:
Q  22 tctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||| |||||||||||||| ||  ||||||||||||||||||| |  | || |||||||| ||||||| |||||||| ||||||||    
T  9844051 tctggctttaaacggggccccctcaagtgggcggtgagattggtc-ccttcggattagtcgattcttggatcggatatcgagtttt 9844135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 9208370 - 9208449
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||| |||||| ||| |||||||||||| |||||| | |||||||| ||||| ||||||| |||  ||||||||||||    
T  9208370 ctttaaatggggcccccgcaagtgggcggtgggattggtc-tcctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 11007283 - 11007362
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| ||| |||||||||||| ||||||||  |||| |||||||| ||||||  |||||||||| ||||||    
T  11007283 ctttaagcggggcccccgcaagtgggcggtgggattggcc-ccctcggattagtcgattctttgatcggatacctagtttt 11007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 1345046 - 1345132
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||| ||||| |||||| |  |||  |||||||| ||||||| |||||||||||||||||    
T  1345046 gctctggctttaaacgggccccccgcaagtggacggtgggattggtcc-ccttggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 9690724 - 9690638
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||||||  |  |||||| ||||| |||||| | || || |||||||| ||||||| |||||||||||||||||    
T  9690724 gctctggctttaaacggggccctcacaagtggacggtgggattggtcctc-tcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 14213000 - 14213079
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattgg-ccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||| | ||| ||||||| |||| |||||| |||  ||| |||||||| ||||||| |||||||||||||||||    
T  14213000 ctttaaacgggggccccgcaagtgggtggtgggattggtcca--ctcggattagtcgattcttggatcggataccgagtttt 14213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 1063262 - 1063213
Alignment:
Q  229 aacaccataaaacgacgaatgtaacttcaattttctttgacagttaacta 278  Q
    |||||||||||| ||||||| |||||  ||||||||| ||||||||||||    
T  1063262 aacaccataaaatgacgaatttaactctaattttcttcgacagttaacta 1063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 17081140 - 17081096
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg 64  Q
    |||||||||||||| |||||| ||| |||||||||||| ||||||    
T  17081140 gctctgactttaaatggggcccccgcaagtgggcggtgggattgg 17081096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 28672185 - 28672264
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||| ||  || |||||||||||| |||||| |  |||| |||||||| ||||||| ||| |||||||||||||    
T  28672185 ctttaaacgggcccctcgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 35171911 - 35171997
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| |||||||||||||||||||||||||    
T  35171911 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 31778142 - 31778228
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||| |||||| |||||||||||| | || |||||||||||| |||||| |||||||||||||||||    
T  31778142 gctctggctttaaatggggcccccgcaagtggacggtgagattggtcctc-tcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 15038077 - 15038156
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||| ||| ||| |||||||||||| |||||| |  ||||||||||||| ||||||| |||||||||||||||||    
T  15038077 ctttaaacggagcccccgcaagtgggcggtgggattggtcc-cctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 11941296 - 11941210
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  11941296 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 44946139 - 44946053
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  44946139 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 36390654 - 36390569
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| ||| || ||| |||||||||||| |||||| |  |||| ||| |||| || ||||||||||||||||||||||    
T  36390654 gctctgactttaaatgggacccccgcaagtgggcggtgggattggtc--cctcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 41329953 - 41330039
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||  ||||||||||||||||||| |  |||||||||||||  |||||| | |||||||||||||||    
T  41329953 gctctggctttaaatggggcccccacaagtgggcggtgagattggtc-ccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 25293268 - 25293356
Alignment:
Q  19 agctctgactttaaacggggcctcc-gtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||| |||||||||||||| || | ||||||||| || |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  25293268 agctctggctttaaacggggccccccgcaagtgggcgatgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 28668991 - 28669070
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| ||  |||||||||||| |||||| |  |||| |||||||| ||| ||| |||||||||||||||||    
T  28668991 ctttaaacggggcccccacaagtgggcggtgggattggtcc-cctcggattagtcgatttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 30466916 - 30466830
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| ||||| ||| |||||||| ||| |||||| |  | || |||||||| ||||||| |||||||||||||||||    
T  30466916 gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcc-cttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 33827659 - 33827573
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || | | |||||||||||| |||||| |  |||  |||||||| ||||||| |||||||||||||||||    
T  33827659 gctctggctttaaacgggacccctgcaagtgggcggtgggattggtcc-ccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 6006950 - 6006890
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||| |||||| | |||||||||||||| || |||||||| |||||||||||||    
T  6006950 aagtggacggtgtgattggtc-tcctcagattagtcgatccttgaatcagataccgagtttt 6006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5394128 - 5394172
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg 64  Q
    |||||||||||||| |||||| ||| |||||||||||| ||||||    
T  5394128 gctctgactttaaatggggccgccgcaagtgggcggtgggattgg 5394172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 6714374 - 6714295
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||| |  ||| |||||| |||||||||||| |  ||||| ||||||| ||||||| || ||||||||||||||    
T  6714374 ctttaaacgggactcccgcaagtggacggtgagattggtcc-cctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 19849944 - 19849988
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg 64  Q
    |||||| |||||||| ||||| ||| |||||||||||||||||||    
T  19849944 gctctggctttaaacagggcccccgcaagtgggcggtgagattgg 19849988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 36242398 - 36242319
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggatacc 100  Q
    |||||| |||||||||||| | ||| |||||||||||| |||||| |  |||| ||||| || ||||||| ||||||||||    
T  36242398 gctctggctttaaacggggtccccgcaagtgggcggtgggattggtc-ccctcggattaatcgattcttggatcggatacc 36242319  T

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Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 7766813 - 7766727
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| |||||||||||||||| ||||||||    
T  7766813 gctctgactttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttgaatcggatatcgagtttt 7766727  T

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Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 4621323 - 4621237
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||| | ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  4621323 gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 4621237  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 15059488 - 15059402
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||| | ||| ||||||||||||||||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  15059488 gctctggctttaaacggggtccccgcaagtgggcggtgagattggtc-ccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 24122134 - 24122220
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||  ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  24122134 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 24122220  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 23734234 - 23734314
Alignment:
Q  27 ctttaaacggggcctcc-gtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| || | ||||||||||||| ||||| |  ||||||||||||| |||||||||||||||||| ||||||    
T  23734234 ctttaaacggggccccccgcaagtgggcggtgaaattggtcc-cctcagattagtcgattcttgaatcggataccaagtttt 23734314  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 23741426 - 23741506
Alignment:
Q  27 ctttaaacggggcctcc-gtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| || | ||||||||||||| ||||| |  ||||||||||||| |||||||||||||||||| ||||||    
T  23741426 ctttaaacggggccccccgcaagtgggcggtgaaattggtcc-cctcagattagtcgattcttgaatcggataccaagtttt 23741506  T

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Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 17935880 - 17935965
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg-ccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||||||||| ||| ||||||||| || |||||| |||  ||| |||||||| ||||||| ||||||||||||||||    
T  17935880 gctctggctttaaacggggcccccgcaagtgggcgatgggattggtcca--ctcggattagtcgattcttggatcggataccgagttt 17935965  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 7197333 - 7197247
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||| |||| | | ||||||||||||||||||| |  |||| |||||||| |||| || |||||||||||||||||    
T  7197333 gctctggctttaaacgaggcccctgcaagtgggcggtgagattggtc-ccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 8254838 - 8254752
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||  |  | | | ||||||| |||||||||||||||||||||||||    
T  8254838 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttga-attagtcgattcttgaatcggataccgagtttt 8254752  T

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Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 9500441 - 9500355
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||| ||| ||  ||||||||||||||||||| | || || |||||||| ||||||| |||||||| ||||||||    
T  9500441 gctctggctttaaacggagcccccacaagtgggcggtgagattggtc-tcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 24674504 - 24674590
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  ||||  ||||||| ||||||| |||||||||||| ||||    
T  24674504 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

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Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 1379009 - 1379090
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgag 103  Q
    |||||| ||||||||||| || ||| |||||| |||||||||||| |  ||||||||||||| ||||||  |||||||||||||    
T  1379009 gctctggctttaaacgggccc-ccgcaagtggacggtgagattggtcc-cctcagattagtcgattcttagatcggataccgag 1379090  T

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Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 22909982 - 22910068
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||| ||| ||| |||||||||||| |||| | |  |||| |||||||| || |||  |||||||||||||||||    
T  22909982 gctctgactttaaacggagcccccgcaagtgggcggtgggatttgtc-ccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 34778457 - 34778535
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||||||||||| ||| |||||| ||||| |||||| |  |||  |||||||| ||||||| ||||||||||||||||    
T  34778457 ctttaaacggggcccccgcaagtggacggtgggattggtcc-ccttggattagtcgattcttggatcggataccgagttt 34778535  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 45331659 - 45331621
Alignment:
Q  69 cctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||| || |||||||||||||||||||||||||    
T  45331659 cctcagattaatcgattcttgaatcggataccgagtttt 45331621  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 33905594 - 33905553
Alignment:
Q  22 tctgactttaaacggggcctccgtaagtgggcggtgagattg 63  Q
    |||| ||||||||||||||||||||||||| ||||| |||||    
T  33905594 tctggctttaaacggggcctccgtaagtggacggtgggattg 33905553  T

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Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 27312268 - 27312353
Alignment:
Q  21 ctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||| |  ||||||||||||| ||||||| |||||||||||||||||    
T  27312268 ctctgactttaaacggagcccccgcaagtgggcggtgggattggtcc-cctcagattagtcgattcttggatcggataccgagtttt 27312353  T

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Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 22120003 - 22120089
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  22120003 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

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Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 40542996 - 40542910
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  40542996 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 22638403 - 22638488
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||||||||||||| |||||||||||| |||||  | |||||  ||||||| ||||||| ||||||||||||||||    
T  22638403 gctctggctttaaacggggcctccgcaagtgggcggtgggattgatc-tcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 2751386 - 2751472
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| || ||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  2751386 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 2751472  T

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Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 3851872 - 3851958
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||  |  |||| |||||||| ||||||| |||||||||||||||||    
T  3851872 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatc-ccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

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Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 7275392 - 7275478
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| ||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  7275392 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 7275478  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 17197036 - 17196950
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  17197036 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 21835266 - 21835352
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||| ||||||||    
T  21835266 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 23330825 - 23330739
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||| ||||||| |||||| ||||||||||| ||||||| |  ||||| |||||||||| |||| |||||||||||||||||    
T  23330825 gctctggcttaaaacgggacctccgcaagtgggcggtaagattggtcc-cctcaaattagtcaatccttggatcggataccgagtttt 23330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 19421346 - 19421431
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||||||||||| |||||  ||  |||||||||||| |||||| | ||||| |||||||| ||||||||||| ||||||||||||    
T  19421346 gctctgactttaaatggggcgcccacaagtgggcggtgggattggtc-tcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 31197712 - 31197791
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| ||| |||||| ||||| |||||| |  ||||||||||||| ||||||| |||||||| ||||||||    
T  31197712 ctttaaacggggcccccgcaagtggtcggtgggattggtcc-cctcagattagtcgattcttggatcggatatcgagtttt 31197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 41907599 - 41907514
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||| |||| ||| ||||||| |||| |||||| |  || |||||||||| ||||||| |||||||||||||||||    
T  41907599 gctctggctttaaacgtggcccccgcaagtgggtggtgggattggtc--ccccagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 11997964 - 11998050
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| ||||| ||| |||||||||||| |||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  11997964 gctctggctttaaactgggcccccgcaagtgggcggtgggattggtc-ccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18044222 - 18044308
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||  ||||||| ||||  ||||| |  ||||||||||||| ||||||| |||||||||||||||||    
T  18044222 gctctggctttaaacggggcccccacaagtgggtggtggaattggtcc-cctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 2103170 - 2103254
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||| |||||||||||| |||||| |  |||| |||||||| |||| || |||||||||||||||||    
T  2103170 gctctggctttaaatggggcccccgcaagtgggcggtgggattggtc--cctcggattagtcgattcatg-atcggataccgagtttt 2103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 654790 - 654705
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| ||||||||  |||||| |||||||||||||||||    
T  654790 gctctggctttaaacgggccc-ccgcaagtgggcggtgggattggtcc-cctcggattagtcggttcttggatcggataccgagtttt 654705  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 7175948 - 7175862
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| || || ||| |||||||||||| |||||| |  |||| |||||||| ||||||| ||||||||| |||||||    
T  7175948 gctctggctttaaacaggacccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggatactgagtttt 7175862  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 22703601 - 22703687
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| |||||||| ||||||  |||||||||| ||||||    
T  22703601 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 23092211 - 23092297
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| || ||| ||||| |||||| |  |||| |||||||| |||| || |||||||||||||||||    
T  23092211 gctctggctttaaacggggcccccgcaaatggacggtgggattggtcc-cctcggattagtcgattcatggatcggataccgagtttt 23092297  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 28089950 - 28090020
Alignment:
Q  36 gggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||| ||| ||||||||| ||||||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  28089950 gggcccccgcaagtgggcgatgagattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 28090020  T

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Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 31274029 - 31274114
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||||| |||| |||||||| |||||||||| |  ||||  ||||||| ||||||| | |||||||||||||||    
T  31274029 gctctggctttaaacggggc-tccgcaagtgggcagtgagattggtcc-cctcgaattagtcgattcttggaccggataccgagtttt 31274114  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 42913599 - 42913513
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||| ||||| |||||| |  |||| |||||||  ||||||  |||||||||||||||||    
T  42913599 gctctggctttaaacggggcccccgcaagtggacggtgggattggtc-ccctcggattagttgattcttagatcggataccgagtttt 42913513  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 43785377 - 43785303
Alignment:
Q  28 tttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgag 103  Q
    ||||||||||||||||| |||||| |||||||||||| |  |||  |||||||| ||| ||| |||||||||||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtc-cccttggattagtcgatttttggatcggataccgag 43785303  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 27704164 - 27704202
Alignment:
Q  69 cctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  27704164 cctcagattagtcgattcttgaatcagataccgagtttt 27704202  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 31712987 - 31712902
Alignment:
Q  21 ctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||| |||||| |||| ||  || |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  31712987 ctctggctttaagcgggaccctcgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 31712902  T

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Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 32849706 - 32849791
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| ||||||| ||| |  || ||||||||| ||| |||||| |  ||||||||||||| ||||||| ||||||||||||||||    
T  32849706 gctctggctttaaatgggactcccataagtgggcagtgggattggtcc-cctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 22299970 - 22300003
Alignment:
Q  74 gattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||| |||||||||||||||||||||||||    
T  22299970 gattagtcgattcttgaatcggataccgagtttt 22300003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 16374116 - 16374195
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||| || ||| || ||| ||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  16374116 ctttaaacgggacccccgcaaatggacggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 21373825 - 21373869
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg 64  Q
    |||||| |||||||||||||| ||| |||||| ||||||||||||    
T  21373825 gctctggctttaaacggggcccccgcaagtggacggtgagattgg 21373869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 27009474 - 27009561
Alignment:
Q  20 gctctgactttaaacggggcctccgtaa-gtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||||| | | || |||| ||||| |||||| |  ||||| ||||||| ||||||| || ||||||||||||||    
T  27009474 gctctgactttaaacggggcccctgcaaagtggacggtgggattggtcc-cctcaaattagtcgattcttggattggataccgagtttt 27009561  T

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Target: scaffold0070 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 40436 - 40521
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  40436 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc--cctcggattagtcgattcttggatcggataccgagtttt 40521  T

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Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 2639497 - 2639411
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  2639497 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 4718760 - 4718846
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  4718760 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

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Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 21603345 - 21603431
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  21603345 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 8765612 - 8765526
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||  ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  8765612 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18128628 - 18128714
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| | | ||||||||||||  |||||| |||| ||||||||||||    
T  18128628 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcct-ctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 34237741 - 34237655
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| ||||| |||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  34237741 gctctggctttaaacggggcccccgcaagtgagcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 2618301 - 2618387
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||| ||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| ||||||| |||||||||    
T  2618301 gctctggctttaaacggagcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 3734709 - 3734623
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| || ||||| ||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  3734709 gctctggctttaaacggggcccccgcaaatgggcagtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 32879394 - 32879480
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||| |||||||||||| ||  |||||||||||| |||||| |  |||| |||||||| ||||||| || ||||||||||||||    
T  32879394 gctctgacattaaacggggcccccacaagtgggcggtgggattggtc-ccctcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 39349371 - 39349457
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||  |  |||| |||||||| ||||||| |||||||||| ||||||    
T  39349371 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatc-ccctcggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 28088401 - 28088478
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggata 98  Q
    |||||||||||||| |||||||||| |||||||||||| |||||  |  ||||||| ||||| ||||||| ||||||||    
T  28088401 gctctgactttaaatggggcctccgcaagtgggcggtgggattgatc-ccctcagaatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 28193589 - 28193674
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||||||||| |   |||||||||||| |||||| |  |||| |||||||| ||||||| ||||||||||||||||    
T  28193589 gctctggctttaaacggggcccctacaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 6953093 - 6953008
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| ||||| ||| |||| ||||||| |||||| |  |||| |||||||| ||||||| |||| ||||||||||||    
T  6953093 gctctggctttaaacagggcccccgcaagttggcggtgggattggtc--cctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 20470032 - 20470117
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||| | ||| ||| |||||||||||| ||||||   ||||| |||||||| ||| ||| |||||||||||||||||    
T  20470032 gctctggctttaaacagagcccccgcaagtgggcggtgggattggt--tcctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 20306023 - 20306109
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  ||||  ||||||| || |||| |||||||||||||||||    
T  20306023 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtc-ccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 21092656 - 21092742
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  ||||  ||||||| || |||| |||||||||||||||||    
T  21092656 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtc-ccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 15259492 - 15259407
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||||||||| ||| ||||||||||||  ||||| |  ||||  ||||||| ||||||| ||||||| ||||||||    
T  15259492 gctctggctttaaacggggcccccgcaagtgggcggtgtaattggtc-ccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24999349 - 24999393
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg 64  Q
    |||||| |||||||||||||| ||| |||||||||||| ||||||    
T  24999349 gctctggctttaaacggggcccccgcaagtgggcggtgggattgg 24999393  T

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Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 2511383 - 2511297
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||||||| |||||| |||||||||||| |||||| | |||||  ||||||  |||||||||||||||||| ||||||    
T  2511383 gctctgactttaaacgggacctccgcaagtgggcggtgggattggtc-tcctcgaattagtagattcttgaatcggataccaagtttt 2511297  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 8097365 - 8097279
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  8097365 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 8456236 - 8456150
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||| ||| |||||| |  |||| |||||||| |||||||||||||||||||||||||    
T  8456236 gctctggctttaaacggggcccccgcaagtgggcagtgggattggtcc-cctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

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Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 24407372 - 24407458
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||||||||||  || |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  24407372 gctctgactttaaacggggccatcgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

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Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 32151535 - 32151621
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  32151535 gctctggctttaaacggggcccccgcaagtgggcggtgagattggtc-ccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

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Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 52821721 - 52821636
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| |||||||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  52821721 gctctggctttaaacggggcc-ccgtaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 52821636  T

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Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 25289800 - 25289715
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  25289800 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc--cctcgaattagtcgattcttggatcggataccgagtttt 25289715  T

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Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 10190828 - 10190742
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||| ||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  10190828 gctctggctttaaacggggcccccgcaagtggacggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 10190742  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 15566585 - 15566500
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  ||||||||||||| ||||||| |||||||||||||||||    
T  15566585 gctctggctttaaacgggccc-ccgcaagtgggcggtgggattggtcc-cctcagattagtcgattcttggatcggataccgagtttt 15566500  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 40133535 - 40133449
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  ||||  ||||||| ||||||| |||||||||||||||||    
T  40133535 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

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Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 49258348 - 49258262
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||  |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  49258348 gctctggctttaaacggggcccccacaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 49258262  T

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Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 1692961 - 1693030
Alignment:
Q  37 ggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||| |||||||||||||||||||||||||    
T  1692961 ggcccccgcaagtgggcggtgggatttgccc-cctcagattagtcgattcttgaatcggataccgagtttt 1693030  T

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Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 34492661 - 34492575
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg-ccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| ||||  ||||||||||  ||||||| ||| |||||||||||||    
T  34492661 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccat--tcagattagttgattcttggatctgataccgagtttt 34492575  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 39041938 - 39041852
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg-ccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| ||||||| |||| |||||| |||  ||| |||||||| ||||||| |||||||||||||||||    
T  39041938 gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcca--ctcggattagtcgattcttggatcggataccgagtttt 39041852  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 10083905 - 10083819
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||  |||||| ||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  10083905 gctctggctttaaacggggcccccacaagtggacggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 10083819  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 18176973 - 18176887
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  | || |||||||| ||||||| ||||||||| |||||||    
T  18176973 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 24165800 - 24165715
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||  |  |||| |||||||| ||||||| |||||||||||||||||    
T  24165800 gctctggctttaaacggggcc-ccgcaagtgggcggtgggattgttcc-cctcggattagtcgattcttggatcggataccgagtttt 24165715  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 26174224 - 26174310
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||  ||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  26174224 gctctggctttaaatagggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 26174310  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 35493022 - 35493108
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| || | ||||||||||||    
T  35493022 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

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Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 45272502 - 45272416
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||  | ||||| |||||||||||||||||    
T  45272502 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagttgactcttggatcggataccgagtttt 45272416  T

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Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 45529840 - 45529755
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||||||| || ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  45529840 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttg-atcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 46576459 - 46576545
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||  |||||| |  |||  |||||||| ||||||| |||||||||||||||||    
T  46576459 gctctggctttaaacggggcccccgcaagtgggcggtcggattggtcc-ccttggattagtcgattcttggatcggataccgagtttt 46576545  T

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Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 53233996 - 53233911
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| || ||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  53233996 gctctggctctaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttg-atcggataccgagtttt 53233911  T

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Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 25379872 - 25379957
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||||||||| ||| ||| |||||||| |||||| |  |||| |||||||| ||||||| ||||||||| ||||||    
T  25379872 gctctggctttaaacggggcccccgcaagcgggcggtgggattggtc-ccctcggattagtcgattcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 31537923 - 31537838
Alignment:
Q  21 ctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||| |||||||||| ||| | | ||||||||||||||||||| |  ||||  ||||||||||||||| |||||||| ||||||||    
T  31537923 ctctggctttaaacggagcccctgcaagtgggcggtgagattggtcc-cctcgaattagtcaattcttggatcggatatcgagtttt 31537838  T

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Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 48104988 - 48105073
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagttt 106  Q
    |||||| |||||||| ||||| ||  ||||||||||||||||||| |  | || |||||||| ||||||| ||||||||||||||||    
T  48104988 gctctggctttaaacagggcccccacaagtgggcggtgagattggtc-ccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 30807239 - 30807153
Alignment:
Q  20 gctctgactttaaacggggcctcc-gtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| || | |||||||||||  |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  30807239 gctctggctttaaacggggccccccgcaagtgggcggtaggattggtc--cctcggattagtcgattcttggatcggataccgagtttt 30807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 54475799 - 54475878
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||||| ||| |||||||||||| |||||| |  |||  |||||||| ||||||| ||| |||||||||||||    
T  54475799 ctttaaacggggccaccgcaagtgggcggtgggattggtc-cccttggattagtcgattcttggatcagataccgagtttt 54475878  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 30257735 - 30257821
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| ||||||| |||||| ||| ||||||||||||  ||||| |  |||| |||||||| ||||||| |||||||||||| ||||    
T  30257735 gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcc-cctcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 40940936 - 40941022
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||||| ||  ||||||| |||  |||||| |  ||||  |||| |||||||||||||| |||||||||||||    
T  40940936 gctctgactttaaacggggcccccacaagtgggtggtaggattggtcc-cctcgaattactcaattcttgaatcagataccgagtttt 40941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 48977499 - 48977585
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| | | |||||||||||| |||||| |  |||| ||||||||  | |||| |||||||||||||||||    
T  48977499 gctctggctttaaacggggcccctgcaagtgggcggtgggattggtc-ccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 52455735 - 52455649
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||||||||| ||| |||||   |||| |||||| |  |||| |||||||| ||||||| || ||||||||||||||    
T  52455735 gctctgactttaaacggggcccccgcaagtgactggtgggattggtcc-cctcggattagtcgattcttggattggataccgagtttt 52455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 17579215 - 17579135
Alignment:
Q  27 ctttaaacggggcc-tccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||| || |||| ||||||||||||||||||| |  ||||||||||||| ||| ||| |||| ||| ||||||||    
T  17579215 ctttaaacgggaccctccgcaagtgggcggtgagattggtc-ccctcagattagtcgatttttggatcgaatatcgagtttt 17579135  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 26108442 - 26108475
Alignment:
Q  74 gattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||| |||||||||||||||||||||||||    
T  26108442 gattagtcgattcttgaatcggataccgagtttt 26108475  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 50731297 - 50731237
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||| |||||| |  ||||||||||||| || |||| |||||||||||||||||    
T  50731297 aagtgggcggtgggattggtcc-cctcagattagtcgatccttggatcggataccgagtttt 50731237  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 50781557 - 50781617
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||| |||||| |  ||||||||||||| || |||| |||||||||||||||||    
T  50781557 aagtgggcggtgggattggtcc-cctcagattagtcgatccttggatcggataccgagtttt 50781617  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 53848494 - 53848434
Alignment:
Q  46 aagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  53848494 aagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 53848434  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 25344143 - 25344058
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| |||  |||||||| || ||||||   ||||| |||||||| ||||||  |||| ||||||||||||    
T  25344143 gctctggctttaaacggggcccccgctagtgggcgatgggattgg--ttcctcggattagtcgattcttagatcgaataccgagtttt 25344058  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 48972746 - 48972714
Alignment:
Q  75 attagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||| |||||||||||||||||||||||||    
T  48972746 attagtcgattcttgaatcggataccgagtttt 48972714  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 53424255 - 53424177
Alignment:
Q  27 ctttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||| || ||| ||||| |||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  53424255 ctttaaacgggccc-ccgcaagtgagcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 53424177  T

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Target: scaffold1175 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 2512 - 2426
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| ||||||||  | ||||||||||||||||||||||    
T  2512 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

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Target: scaffold0576 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 5168 - 5082
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| || ||||||||| |||||| |  |||| |||||||| ||||||| |||||||||||||||||    
T  5168 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc-cctcggattagtcgattcttggatcggataccgagtttt 5082  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 52957 - 52871
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| | |||||||||  |||||| | || || |||||||| |||||||||||||||||||||||||    
T  52957 gctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctc-tcggattagtcgattcttgaatcggataccgagtttt 52871  T

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Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 7394 - 7309
Alignment:
Q  21 ctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| |||||||||| ||||||    
T  7394 ctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcggataccaagtttt 7309  T

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Target: scaffold0102 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 39205 - 39289
Alignment:
Q  22 tctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||| |||||||||||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| ||| |||||||||||||    
T  39205 tctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcgattcttggatcagataccgagtttt 39289  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 66865 - 66951
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |  |||| ||||||||  | |||| |||||||||||||||||    
T  66865 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtc-ccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 13127 - 13047
Alignment:
Q  26 actttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    ||||||||||||||| ||| |||||| ||||| |||||  |  ||||||||||||  ||||||| |||||||||||||||||    
T  13127 actttaaacggggcccccgcaagtggacggtgggattgatcc-cctcagattagttgattcttggatcggataccgagtttt 13047  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 161920 - 162006
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattggccatcctcagattagtcaattcttgaatcggataccgagtttt 107  Q
    |||||| |||| || |||||| ||| |||||||||||| |||||| |  |||| |||||||| ||||||| ||| |||||||||||||    
T  161920 gctctggcttttaatggggcccccgcaagtgggcggtgggattggtcc-cctcggattagtcgattcttggatcagataccgagtttt 162006  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 97452 - 97408
Alignment:
Q  20 gctctgactttaaacggggcctccgtaagtgggcggtgagattgg 64  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||    
T  97452 gctctgactttaaacgggacccccgcaagtgggcggtgggattgg 97408  T

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