View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_low_83 (Length: 341)
Name: NF20151_low_83
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_low_83 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 13 - 323
Target Start/End: Complemental strand, 32276677 - 32276364
Alignment:
| Q |
13 |
aatattcgaattgatggttaaacccactt--ttgtcttcaaagtataaaatactaaacacaacgggtaaagtgttccaaatatcctttatacccacatta |
110 |
Q |
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| T |
32276677 |
aatattcgaattgatggttaaacccacttgtttgtcttcaaagtatttaatactaaacacaacggataaagtgtttcaaatatcctttatacccacatta |
32276578 |
T |
|
| Q |
111 |
ataaaatatcct-ttataagaaaaatgagaatgttgtgtgtatatatacatgtcaaacaaaagaagatgtgttttagaccttcatctatcaaacttttct |
209 |
Q |
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| T |
32276577 |
ataaaatatttgcttataagaaaaatgagaaggttgtgtgtatatatacacgtcaaacaaaagaagatgtgttttagaccttcatctatcaaacttttct |
32276478 |
T |
|
| Q |
210 |
aaattctaaagtcgattaccttttcatcaaacgactagactacttaatgagattaatttaattcactttcttacaattacataaacaaggaaaacgtact |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32276477 |
aaattctaaagtcgattaccttttcatcaaacgactagactacttaatgagattaatttaattcactttcctacaattacataaacaaggaaaacgtact |
32276378 |
T |
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| Q |
310 |
caagttggactaat |
323 |
Q |
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|||||||||||||| |
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| T |
32276377 |
caagttggactaat |
32276364 |
T |
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