View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20151_low_89 (Length: 328)
Name: NF20151_low_89
Description: NF20151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20151_low_89 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 21 - 312
Target Start/End: Original strand, 22714770 - 22715064
Alignment:
| Q |
21 |
aaaatataaaaccatgaaaatgaaactaatgatgatgttacttacgtgtctttacgagagaaaatgataggaaatgcagttccaacaagagcaattccaa |
120 |
Q |
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| T |
22714770 |
aaaatataaaaccatgaaaatgaaactaatgatgatgttacttacgtgtctttacgagagaaaatgataggaaatgcagttccaacaagagcaattccaa |
22714869 |
T |
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| Q |
121 |
tagcaccagcaacaagataaatagtaccatcagaagatacatctccaactgctgaaacaacaactgatgatgatctcttctg---attattattattatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
22714870 |
tagcaccagcaacaagataaatagtaccatcagaagatacatctccaactgctgaaacaacaactgatgatgatctcttctgattattattattattatg |
22714969 |
T |
|
| Q |
218 |
aatcttattacatggcacagttgttaagcctccaaatgagtgtttagtgttgttggaaattgtaacattgggaatgattgtgttcaaggtcatgg |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22714970 |
aatcttattacatggcacagttgttaagcctccaaatgagtgtttagtgttgttggaaattgtaacattgggaatgattgtgttcaaggtcatgg |
22715064 |
T |
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