View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20156_low_11 (Length: 227)

Name: NF20156_low_11
Description: NF20156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20156_low_11
NF20156_low_11
[»] chr1 (63 HSPs)
chr1 (16-227)||(600995-601206)
chr1 (87-210)||(6292518-6292641)
chr1 (89-209)||(10199330-10199451)
chr1 (87-178)||(31517693-31517785)
chr1 (92-210)||(3597202-3597321)
chr1 (125-214)||(18327063-18327152)
chr1 (35-178)||(26179445-26179588)
chr1 (63-141)||(28689442-28689521)
chr1 (35-210)||(23373234-23373408)
chr1 (76-210)||(4622107-4622242)
chr1 (124-200)||(15709912-15709988)
chr1 (90-204)||(37593611-37593726)
chr1 (35-114)||(24146298-24146377)
chr1 (35-113)||(24702213-24702291)
chr1 (75-177)||(44422712-44422815)
chr1 (35-84)||(4200181-4200231)
chr1 (35-142)||(4202140-4202247)
chr1 (87-176)||(4445733-4445823)
chr1 (124-210)||(4757401-4757487)
chr1 (35-99)||(26293161-26293224)
chr1 (75-121)||(27820348-27820394)
chr1 (36-117)||(33975543-33975625)
chr1 (35-135)||(46499870-46499972)
chr1 (35-76)||(50319244-50319286)
chr1 (35-114)||(1879067-1879145)
chr1 (80-121)||(51695506-51695547)
chr1 (152-212)||(9602573-9602633)
chr1 (63-141)||(15437966-15438043)
chr1 (75-206)||(27140491-27140623)
chr1 (80-143)||(35925708-35925772)
chr1 (58-121)||(39603842-39603903)
chr1 (74-133)||(19092382-19092441)
chr1 (152-210)||(6659771-6659829)
chr1 (175-217)||(6775101-6775143)
chr1 (81-166)||(10439705-10439791)
chr1 (65-145)||(10854738-10854817)
chr1 (35-76)||(14737781-14737823)
chr1 (35-84)||(15360846-15360896)
chr1 (80-114)||(15361058-15361092)
chr1 (45-141)||(29834895-29834990)
chr1 (37-109)||(38651454-38651525)
chr1 (35-84)||(49517022-49517072)
chr1 (81-114)||(4700084-4700117)
chr1 (87-135)||(9507269-9507318)
chr1 (123-212)||(24279811-24279900)
chr1 (36-84)||(27738248-27738297)
chr1 (150-195)||(32515377-32515422)
chr1 (36-84)||(44032067-44032116)
chr1 (80-121)||(45975708-45975749)
chr1 (95-210)||(4868433-4868548)
chr1 (168-212)||(7200599-7200643)
chr1 (126-210)||(24417656-24417740)
chr1 (63-114)||(25479584-25479633)
chr1 (95-127)||(25944465-25944497)
chr1 (82-141)||(26184768-26184828)
chr1 (160-212)||(32859866-32859918)
chr1 (95-210)||(33723303-33723419)
chr1 (154-210)||(33976271-33976327)
chr1 (80-163)||(35058400-35058484)
chr1 (50-114)||(35707216-35707280)
chr1 (82-141)||(37654718-37654778)
chr1 (80-139)||(46252674-46252734)
chr1 (126-210)||(51929383-51929467)
[»] chr8 (44 HSPs)
chr8 (40-178)||(20672729-20672867)
chr8 (87-178)||(44236776-44236868)
chr8 (63-212)||(39551128-39551276)
chr8 (90-210)||(43368621-43368742)
chr8 (76-162)||(42215275-42215362)
chr8 (123-210)||(34770930-34771017)
chr8 (124-210)||(2487929-2488015)
chr8 (101-210)||(4560541-4560651)
chr8 (80-195)||(21653099-21653210)
chr8 (80-137)||(23996622-23996679)
chr8 (88-179)||(7646232-7646324)
chr8 (82-177)||(12972878-12972974)
chr8 (96-212)||(32840905-32841022)
chr8 (80-210)||(7714260-7714391)
chr8 (89-210)||(9700028-9700150)
chr8 (80-181)||(11415172-11415274)
chr8 (80-157)||(25869240-25869318)
chr8 (50-210)||(33553230-33553389)
chr8 (80-121)||(27028849-27028890)
chr8 (80-143)||(3090164-3090228)
chr8 (37-166)||(14949842-14949971)
chr8 (66-141)||(39866724-39866800)
chr8 (82-177)||(41606857-41606953)
chr8 (101-179)||(2482902-2482981)
chr8 (80-142)||(11183563-11183626)
chr8 (87-166)||(30918138-30918217)
chr8 (35-84)||(5349661-5349708)
chr8 (90-207)||(6950350-6950468)
chr8 (95-210)||(10758178-10758294)
chr8 (80-193)||(11569395-11569509)
chr8 (63-143)||(26473740-26473819)
chr8 (95-178)||(34849136-34849221)
chr8 (150-212)||(43393691-43393753)
chr8 (80-121)||(8062542-8062583)
chr8 (80-179)||(31885013-31885111)
chr8 (81-114)||(34290888-34290921)
chr8 (80-116)||(1433566-1433602)
chr8 (75-146)||(3254238-3254310)
chr8 (33-84)||(3537099-3537151)
chr8 (150-210)||(11059650-11059710)
chr8 (35-78)||(13561386-13561430)
chr8 (162-210)||(18331815-18331863)
chr8 (90-141)||(31875585-31875637)
chr8 (80-143)||(38307680-38307744)
[»] chr2 (44 HSPs)
chr2 (83-210)||(43529779-43529907)
chr2 (80-178)||(12313126-12313225)
chr2 (90-208)||(17775389-17775508)
chr2 (125-210)||(13866942-13867027)
chr2 (123-212)||(28803449-28803538)
chr2 (150-210)||(22878187-22878247)
chr2 (50-141)||(31228827-31228919)
chr2 (124-208)||(33931493-33931577)
chr2 (80-206)||(9478317-9478444)
chr2 (80-210)||(15120201-15120332)
chr2 (80-210)||(18179161-18179292)
chr2 (86-212)||(40158742-40158869)
chr2 (93-178)||(787363-787449)
chr2 (80-205)||(33192220-33192345)
chr2 (126-208)||(40776020-40776102)
chr2 (81-162)||(41817187-41817269)
chr2 (35-210)||(40837358-40837546)
chr2 (80-166)||(41851553-41851641)
chr2 (125-217)||(40943977-40944069)
chr2 (126-210)||(42419859-42419942)
chr2 (80-210)||(8017452-8017583)
chr2 (90-142)||(9174843-9174897)
chr2 (82-176)||(32106754-32106849)
chr2 (63-121)||(39983345-39983401)
chr2 (81-166)||(1741997-1742083)
chr2 (124-210)||(4350753-4350839)
chr2 (89-142)||(5133799-5133853)
chr2 (152-210)||(15370244-15370302)
chr2 (80-141)||(34652026-34652088)
chr2 (63-179)||(35485920-35486035)
chr2 (63-113)||(42907362-42907412)
chr2 (36-84)||(1493581-1493630)
chr2 (80-140)||(1939323-1939384)
chr2 (69-114)||(3973542-3973587)
chr2 (30-78)||(37053541-37053590)
chr2 (80-166)||(41293127-41293215)
chr2 (80-172)||(43199743-43199836)
chr2 (96-200)||(43530042-43530147)
chr2 (95-163)||(44606078-44606147)
chr2 (35-78)||(3673759-3673803)
chr2 (63-133)||(10563556-10563625)
chr2 (82-114)||(24097828-24097860)
chr2 (87-190)||(27237834-27237938)
chr2 (80-143)||(33941927-33941991)
[»] chr5 (37 HSPs)
chr5 (80-210)||(12459922-12460053)
chr5 (81-200)||(17258814-17258934)
chr5 (84-210)||(14331389-14331515)
chr5 (35-141)||(29116941-29117048)
chr5 (63-141)||(10272421-10272498)
chr5 (88-210)||(499652-499775)
chr5 (90-177)||(11700332-11700420)
chr5 (127-210)||(32849244-32849327)
chr5 (90-207)||(8089964-8090082)
chr5 (80-121)||(3970691-3970732)
chr5 (80-158)||(39105482-39105562)
chr5 (35-114)||(985585-985665)
chr5 (154-210)||(36796628-36796684)
chr5 (63-176)||(2568661-2568773)
chr5 (87-141)||(10125708-10125763)
chr5 (51-114)||(17369005-17369068)
chr5 (80-210)||(28586687-28586818)
chr5 (101-195)||(32172692-32172787)
chr5 (76-141)||(342380-342446)
chr5 (149-203)||(444010-444064)
chr5 (87-195)||(7907906-7908016)
chr5 (35-84)||(14295458-14295508)
chr5 (63-143)||(17368679-17368758)
chr5 (47-143)||(37611203-37611298)
chr5 (47-143)||(37787933-37788028)
chr5 (95-207)||(5377121-5377234)
chr5 (80-121)||(7984987-7985028)
chr5 (77-114)||(8177550-8177587)
chr5 (35-75)||(10303753-10303794)
chr5 (35-114)||(12242728-12242806)
chr5 (90-210)||(31208500-31208621)
chr5 (95-210)||(11297117-11297233)
chr5 (80-143)||(17827542-17827606)
chr5 (35-78)||(28586840-28586884)
chr5 (40-79)||(32194154-32194194)
chr5 (63-141)||(36318777-36318854)
chr5 (50-113)||(36774726-36774787)
[»] chr4 (37 HSPs)
chr4 (63-179)||(2996576-2996691)
chr4 (80-210)||(6987662-6987793)
chr4 (87-217)||(19304951-19305082)
chr4 (59-121)||(19429706-19429768)
chr4 (129-212)||(18628472-18628555)
chr4 (35-121)||(25487576-25487663)
chr4 (35-135)||(19422370-19422472)
chr4 (101-210)||(32831439-32831549)
chr4 (90-137)||(6978956-6979004)
chr4 (50-110)||(19394785-19394845)
chr4 (76-143)||(20936217-20936285)
chr4 (87-210)||(27123273-27123397)
chr4 (75-205)||(28615536-28615668)
chr4 (63-210)||(17822786-17822932)
chr4 (81-135)||(29467620-29467675)
chr4 (81-143)||(44249304-44249367)
chr4 (81-210)||(1312860-1312990)
chr4 (35-84)||(4071834-4071884)
chr4 (40-114)||(5131268-5131345)
chr4 (30-114)||(20936042-20936125)
chr4 (95-162)||(21523591-21523659)
chr4 (35-84)||(21952913-21952963)
chr4 (35-84)||(30024652-30024702)
chr4 (124-210)||(36577463-36577549)
chr4 (93-134)||(48719388-48719430)
chr4 (35-84)||(49219091-49219141)
chr4 (85-181)||(22236055-22236152)
chr4 (101-172)||(50799989-50800061)
chr4 (81-114)||(53792590-53792623)
chr4 (35-76)||(54986374-54986415)
chr4 (149-209)||(1017116-1017176)
chr4 (123-179)||(1408272-1408328)
chr4 (35-78)||(4191569-4191613)
chr4 (82-114)||(7694028-7694060)
chr4 (160-212)||(32420977-32421029)
chr4 (89-204)||(33534096-33534212)
chr4 (82-114)||(51210473-51210505)
[»] chr7 (36 HSPs)
chr7 (95-210)||(23214888-23215004)
chr7 (82-205)||(25670512-25670636)
chr7 (80-210)||(33894645-33894776)
chr7 (52-141)||(39539771-39539861)
chr7 (35-212)||(3836602-3836778)
chr7 (63-143)||(46082037-46082118)
chr7 (123-212)||(8427075-8427164)
chr7 (130-210)||(4970713-4970792)
chr7 (96-179)||(30535597-30535681)
chr7 (80-210)||(28691757-28691887)
chr7 (81-179)||(48131572-48131671)
chr7 (63-120)||(39505959-39506014)
chr7 (35-108)||(42656467-42656541)
chr7 (35-141)||(7244654-7244760)
chr7 (84-212)||(12234808-12234937)
chr7 (124-195)||(5288173-5288245)
chr7 (124-200)||(8094369-8094445)
chr7 (126-210)||(31341200-31341284)
chr7 (35-78)||(39591541-39591585)
chr7 (129-208)||(15321707-15321786)
chr7 (63-134)||(37064218-37064289)
chr7 (38-143)||(43250687-43250794)
chr7 (124-210)||(22387817-22387903)
chr7 (63-210)||(24363521-24363668)
chr7 (156-210)||(29363603-29363657)
chr7 (98-209)||(425745-425858)
chr7 (89-209)||(4001614-4001735)
chr7 (35-78)||(1417216-1417260)
chr7 (150-210)||(1418508-1418568)
chr7 (81-121)||(6552303-6552343)
chr7 (95-142)||(11048060-11048108)
chr7 (35-78)||(30456524-30456568)
chr7 (35-78)||(30496656-30496700)
chr7 (94-165)||(30553374-30553446)
chr7 (35-78)||(35536059-35536103)
chr7 (35-78)||(45813254-45813298)
[»] chr6 (32 HSPs)
chr6 (83-178)||(27595520-27595616)
chr6 (80-210)||(281769-281900)
chr6 (80-210)||(7148684-7148815)
chr6 (58-143)||(32577974-32578060)
chr6 (89-210)||(35070388-35070510)
chr6 (63-164)||(20368147-20368247)
chr6 (82-179)||(32171335-32171433)
chr6 (90-178)||(34403883-34403972)
chr6 (35-117)||(2205605-2205686)
chr6 (87-210)||(2460072-2460196)
chr6 (80-135)||(13908481-13908537)
chr6 (83-178)||(27693392-27693488)
chr6 (39-84)||(281916-281962)
chr6 (90-143)||(725643-725697)
chr6 (63-143)||(4006717-4006796)
chr6 (80-141)||(4420661-4420723)
chr6 (35-84)||(29274297-29274347)
chr6 (80-141)||(34939531-34939593)
chr6 (80-114)||(34939762-34939796)
chr6 (92-210)||(848019-848137)
chr6 (87-211)||(10616462-10616586)
chr6 (80-117)||(12230379-12230416)
chr6 (95-220)||(31624291-31624419)
chr6 (35-72)||(31776355-31776392)
chr6 (35-64)||(32513777-32513806)
chr6 (124-173)||(33116647-33116696)
chr6 (125-165)||(8035114-8035154)
chr6 (168-212)||(12111074-12111118)
chr6 (35-78)||(24836273-24836317)
chr6 (36-75)||(29940749-29940789)
chr6 (80-143)||(31624108-31624172)
chr6 (82-114)||(32386581-32386613)
[»] chr3 (38 HSPs)
chr3 (50-209)||(36200086-36200244)
chr3 (35-121)||(44284091-44284176)
chr3 (80-210)||(11253519-11253650)
chr3 (81-210)||(30923820-30923949)
chr3 (77-141)||(3044249-3044314)
chr3 (80-212)||(22667422-22667554)
chr3 (80-212)||(22724061-22724193)
chr3 (35-114)||(49586954-49587034)
chr3 (80-210)||(30573836-30573966)
chr3 (131-210)||(50211805-50211884)
chr3 (87-168)||(21574515-21574597)
chr3 (123-212)||(1395701-1395790)
chr3 (149-218)||(31403447-31403516)
chr3 (81-145)||(36101587-36101652)
chr3 (35-114)||(48528530-48528608)
chr3 (95-210)||(45541604-45541720)
chr3 (80-178)||(37273152-37273251)
chr3 (93-143)||(38318991-38319042)
chr3 (35-121)||(41028882-41028969)
chr3 (35-84)||(1395623-1395673)
chr3 (84-137)||(25925764-25925818)
chr3 (35-84)||(38462233-38462283)
chr3 (81-177)||(2152132-2152229)
chr3 (154-215)||(21872211-21872272)
chr3 (80-141)||(24887274-24887335)
chr3 (35-79)||(26990686-26990731)
chr3 (81-114)||(34414802-34414835)
chr3 (81-145)||(36139897-36139962)
chr3 (35-78)||(905044-905088)
chr3 (35-78)||(10101550-10101594)
chr3 (35-78)||(10212475-10212519)
chr3 (35-78)||(15304421-15304465)
chr3 (95-164)||(20880509-20880580)
chr3 (80-143)||(27290889-27290953)
chr3 (150-214)||(27294435-27294499)
chr3 (35-78)||(34954035-34954079)
chr3 (148-212)||(41057242-41057306)
chr3 (150-210)||(45590740-45590800)
[»] scaffold0141 (1 HSPs)
scaffold0141 (132-212)||(9697-9777)
[»] scaffold0024 (1 HSPs)
scaffold0024 (35-78)||(27528-27572)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 600995 - 601206
Alignment:
Q  16 gtaagcacatctgaagacaatttctataacaaaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaat 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  600995 gtaagcacatctaaagacaatttctataacaaaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaat 601094  T
Q  116 agcttacgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaatatac 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  601095 agcttacaacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaacatac 601194  T
Q  216 cttaattcaaac 227  Q
    ||||||||||||    
T  601195 cttaattcaaac 601206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 6292518 - 6292641
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcag 185  Q
    ||||||| |||||||||||||||||||| |||||| || ||||||||||| ||||||   | ||||||||||||| |||||||||||||||||| |  ||    
T  6292518 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttttaaaa-attctcccaaacaatctcaaaagtgcttatgtcagtag 6292616  T
Q  186 ataagctcaagtaagtcaatccaaa 210  Q
    |||||||||| ||||||||||||||    
T  6292617 ataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 10199451 - 10199330
Alignment:
Q  89 gagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagat 187  Q
    ||||| |||||||||||||||||||| | |||| || ||||||||||| | ||||| |   |||||||||| ||| ||| ||||||||||||||  ||||    
T  10199451 gagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagat 10199352  T
Q  188 aagctcaagtaagtcaatccaa 209  Q
    |||||||| |||||||||||||    
T  10199351 aagctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 31517785 - 31517693
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||||| |||||||||||||||||||| |||||| || |||||||| |||||||||  ||  |||||||||||||||||| |||||||||||    
T  31517785 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatg 31517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 3597321 - 3597202
Alignment:
Q  92 agtttatgaaaataagctgaaaatagcttacgac-atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataag 190  Q
    |||||||| ||||||||||||||||||||| | | |||||||||||| ||||  |  | ||| ||||||||||||| ||||| |||| | || ||||||     
T  3597321 agtttatggaaataagctgaaaatagcttatggccatgtcataagttatttttatcaactcttccaaacagtctcacaagtggttatatcattagataac 3597222  T
Q  191 ctcaagtaagtcaatccaaa 210  Q
    ||||| ||||||||||||||    
T  3597221 ctcaaataagtcaatccaaa 3597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 18327152 - 18327063
Alignment:
Q  125 catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaatata 214  Q
    ||||||||||||||||||| ||  |||| ||||| ||| |||||||||||||||  |  |||||||||||| |||| |||||||||||||    
T  18327152 catgtcataagttgttttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaatata 18327063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 178
Target Start/End: Original strand, 26179445 - 26179588
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcata 133  Q
    ||||||| || ||| | |||| ||||| || ||||||| ||||| |||||| ||||||||||||| ||| | |||||||| | || | | ||||||||||    
T  26179445 atttctagaagaaagaaaaaaaaaagtaaaattgttttgatataagctatcttggagagtttatggaaa-atgctgaaaacaactcatgcacatgtcata 26179543  T
Q  134 agttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||| |||| | |||||| |||||||||| ||||| |||||    
T  26179544 agttgtttccttaaactctccctaacagtctcacaagtgtttatg 26179588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 28689521 - 28689442
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    |||||||||||||||| |||||| |||| || |||||||||||||||||||| | ||||  ||||||||||||| |||||    
T  28689521 aagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgttt 28689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 23373408 - 23373234
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcata 133  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||   ||||||||| |||| |||   |||||||||||||| || |   |||||||||||    
T  23373408 atttctatatcaaaagataaaataaagtcaatctgttttcataa--gctatcctgaagagcttacagaaataagctgaaaacagatgtggacatgtcata 23373311  T
Q  134 agttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||   ||   ||||||||||| ||||| |||||||||| | |  ||| ||| |||| ||||||||| ||||    
T  23373310 agttgtttctataagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaattcaaa 23373234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 4622107 - 4622242
Alignment:
Q  76 atatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc-ttagattctcccaaacagtctcaaaagtgc 173  Q
    |||||||||| ||||||| || |||||||||||| |||| ||||||  ||||||||||||| ||||  | ||||| ||| ||||||||||| | |||| |    
T  4622107 atatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgttcccattaga-tcttccaaacagtctaacaagttc 4622205  T
Q  174 ttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||| || || |||||| || ||||||||| ||||    
T  4622206 ttatgtcattagttaagcttaaataagtcaattcaaa 4622242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 15709912 - 15709988
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaag 200  Q
    |||||||||||| | ||| | ||  |||||||||||||||||||||||||||||| ||  |||||| ||||||||||    
T  15709912 acatgtcataagctatttccgtaagttctcccaaacagtctcaaaagtgcttatgctagtagataacctcaagtaag 15709988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 37593726 - 37593611
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc-ttagattctcccaaacagtctcaaaagtgcttatgttatcagat 187  Q
    |||| |||||||||||||||||||| |||||| | |||||||||||||||| ||| |||| || ||||||||||||| | ||||| |||||  |  | ||    
T  37593726 agagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattag-ttttcccaaacagtctaacaagtgtttatgccagtatat 37593628  T
Q  188 aagctcaagtaagtcaa 204  Q
    |||||||| ||||||||    
T  37593627 aagctcaaataagtcaa 37593611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 24146377 - 24146298
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||||| | |||| || ||||  | |||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  24146377 atttctataacaaaagtcaaatgaaatcaaactattttcatatacgctatccttgagagtttatggaaataagctaaaaa 24146298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 24702213 - 24702291
Alignment:
Q  35 atttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaa 113  Q
    |||||||||||||||| | ||||||||||||| | ||||||||||  ||||| ||||||| ||||||||||||| |||||    
T  24702213 atttctataacaaaaaattaaataaagtcaagct-ttttcatataaactatcatggagagcttatgaaaataaggtgaaa 24702291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 44422712 - 44422815
Alignment:
Q  75 tatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgc 173  Q
    |||| |||||||||||||| |||||||||||||||| |   ||||||  ||||||||||||| | ||||| ||   ||||||| |||||||||||||||     
T  44422712 tataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctctcccagacagtctcaaaagtgt 44422811  T
Q  174 ttat 177  Q
    ||||    
T  44422812 ttat 44422815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 4200181 - 4200231
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| |||||    
T  4200181 atttttataacaaaagataaaataaagtcaagttgttttcatataagctat 4200231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 4202247 - 4202140
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcat 132  Q
    ||||||||||||||| |||||  ||||||||| |||||||| |   ||||||  | |||| ||| |||||||||||||||||||||||  ||||||||||    
T  4202247 atttctataacaaaagataaaccaaagtcaagctgttttcaaaa--gctatctggcagagcttacgaaaataagctgaaaatagcttatggacatgtcat 4202150  T
Q  133 aagttgtttt 142  Q
    ||| ||||||    
T  4202149 aagctgtttt 4202140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 4445733 - 4445823
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgctta 176  Q
    ||||||| || |||||||||| |||||| |||||  || ||||| ||||| || |||| || ||||||||||||||||||| |||||||||    
T  4445733 tggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaagtgctta 4445823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 4757401 - 4757487
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||||||||||||| ||  |||| |||||  |||||| ||||| |||||| |  |||||||||||| |||||||| |||||    
T  4757401 acatgtcataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 26293224 - 26293161
Alignment:
Q  35 atttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctatcctggagagtttatg 99  Q
    |||||||||||||||| |||||||||||||| ||||||||  ||| ||||||||||| ||||||||    
T  26293224 atttctataacaaaaagtaaaataaagtcaaattgttttc--ataagctatcctggaaagtttatg 26293161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 27820394 - 27820348
Alignment:
Q  75 tatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||    
T  27820394 tataagctatcttggagaatttatgaaaataagctgaaaatagctta 27820348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 33975543 - 33975625
Alignment:
Q  36 tttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatag 117  Q
    |||||||| |||||| ||||||||| ||||  ||||||| |||   ||||||| ||||| |||||||||||||||||||||||    
T  33975543 tttctatagcaaaaagtaaaataaaatcaaactgttttcgtatgaactatcctagagagcttatgaaaataagctgaaaatag 33975625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 46499972 - 46499870
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcat 132  Q
    |||||||||| |||| ||||||||||||||| ||||||| || || ||| || ||||||| ||||||||||||| | |||| || |||  ||||||||||    
T  46499972 atttctataagaaaagataaaataaagtcaaattgtttttatttaagctttcatggagagcttatgaaaataaggttaaaacagtttagggacatgtcat 46499873  T
Q  133 aag 135  Q
    |||    
T  46499872 aag 46499870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 50319244 - 50319286
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcata 76  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  50319244 atttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 1879145 - 1879067
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||| || |||||||||||||||  |||||||||||| ||| || |||| ||  |||||||||||||||||||    
T  1879145 atttctataacagaagataaaataaagtcaaaatgttttcatataagctgtcttggaaag--tatgaaaataagctgaaaa 1879067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 51695547 - 51695506
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  51695547 gctatcttggagaatttatgaaaataagctgaaaatagctta 51695506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 9602633 - 9602573
Alignment:
Q  152 tcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||| ||||||| ||||||||| ||||  |||||||||||  ||||||||||||||||    
T  9602633 tcccaaatagtctcacaagtgcttaagttagtagataagctcagataagtcaatccaaata 9602573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 15437966 - 15438043
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttt 141  Q
    ||||||||||||||   |||||||| ||||||||| | ||||||||||||| || |||| | ||||||||||||||||||    
T  15437966 aagttgttttcatag--gctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgttt 15438043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 206
Target Start/End: Original strand, 27140491 - 27140623
Alignment:
Q  75 tatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgc 173  Q
    |||| |||||| ||||||| ||||| |||||||||||||| | ||||  ||||||||||||| ||||| |||| | |||| |||| || || | || ||     
T  27140491 tataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaagagacttacaattgt 27140590  T
Q  174 ttatgttatcagataagctcaagtaagtcaatc 206  Q
    |||||| |  |||||||||||  ||||||||||    
T  27140591 ttatgtcaatagataagctcatataagtcaatc 27140623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 35925708 - 35925772
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||||| ||||||||||||| ||||||| |||||| |||||| | |||||||||||| |||||||    
T  35925708 gctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttc 35925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 39603903 - 39603842
Alignment:
Q  58 aagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||| ||||||||||  ||||||||||  |||| || |||||||||||||||||||||||||||    
T  39603903 aagttaagttgtttt--tatatgctattttggatagcttatgaaaataagctgaaaatagctta 39603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 19092441 - 19092382
Alignment:
Q  74 atatatgctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcata 133  Q
    ||||| ||||||||| |||| ||||||||||||| |||||| || ||| |||||||||||    
T  19092441 atataagctatcctgaagagcttatgaaaataaggtgaaaacagtttatgacatgtcata 19092382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 6659771 - 6659829
Alignment:
Q  152 tcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||| ||||||| ||||||||||| ||  ||||||||| || ||||||||||||||    
T  6659771 tcccaaatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaa 6659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 6775101 - 6775143
Alignment:
Q  175 tatgttatcagataagctcaagtaagtcaatccaaatatacct 217  Q
    |||||||  ||||||||| ||||||||||||||||||||||||    
T  6775101 tatgttagtagataagctgaagtaagtcaatccaaatatacct 6775143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 10439705 - 10439791
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctca 166  Q
    ||||||||||||||||||| |||||||||||||  || |||  |||||||||||  |||||||| ||   ||||||||| |||||||    
T  10439705 ctatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaatagtctca 10439791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 10854738 - 10854817
Alignment:
Q  65 gttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttctt 145  Q
    ||||||||||||||  |||||||| | || ||| |||||||||||||||| |||||  | |||||||||||| |||||||||    
T  10854738 gttgttttcatata--ctatcctgaacagcttaagaaaataagctgaaaacagcttgtgaacatgtcataagctgttttctt 10854817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 14737823 - 14737781
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcata 76  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  14737823 atttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 15360846 - 15360896
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| |||||    
T  15360846 atttctataacaaaagataaaataaagtcaaactgttttcatataagctat 15360896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 15361058 - 15361092
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||||| ||||||||||||||||||||    
T  15361058 gctatcctggagagcttatgaaaataagctgaaaa 15361092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 29834990 - 29834895
Alignment:
Q  45 caaaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    |||||||||||||||||||| ||||||||  ||| |||||| || |||| ||||| ||||||  |||||| ||||||  |||| ||| ||||||||||    
T  29834990 caaaaataaaataaagtcaaattgttttc--ataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgttt 29834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 38651525 - 38651454
Alignment:
Q  37 ttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagct 109  Q
    ||||||||||||| ||||| ||||||| | |||||||||||   |||||||||||||| |||| ||||||||||    
T  38651525 ttctataacaaaagataaactaaagtcgaattgttttcataa--gctatcctggagagcttataaaaataagct 38651454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 49517022 - 49517072
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| ||||||||||||||| |||||||||| || |||||    
T  49517022 atttctataacaaaagataaaataaagtcaaattgttttcatttaagctat 49517072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 4700117 - 4700084
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||| ||||||||||||||||||||    
T  4700117 ctatcctggagagcttatgaaaataagctgaaaa 4700084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 9507269 - 9507318
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacga-catgtcataag 135  Q
    |||||| |||||| ||||||||| |||||||||||||| |||||||||||    
T  9507269 tggagattttatggaaataagcttaaaatagcttacgagcatgtcataag 9507318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 24279811 - 24279900
Alignment:
Q  123 gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||||||||||| | ||| ||| ||||| |||||||| ||||| ||||| ||  | ||||| |||| |||| ||||| |||||    
T  24279811 gacatgtcataagttgtttccataggttcccccaatcagtctcacaagtgtttatgctagtaaataagttcaaataagacaatctaaata 24279900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 27738297 - 27738248
Alignment:
Q  36 tttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||| |||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcatataagctat 27738248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 32515422 - 32515377
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaa 195  Q
    ||||||||||||||||| ||||||||||||||  |||||| |||||    
T  32515422 tctcccaaacagtctcacaagtgcttatgttagtagataaactcaa 32515377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 44032116 - 44032067
Alignment:
Q  36 tttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||  |||||||||||||| ||||||||||||| |||||    
T  44032116 tttctataacaaaagctaaaataaagtcaaattgttttcatataagctat 44032067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 45975708 - 45975749
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  45975708 gctatcttggagaatttatgaaaataagctgaaaacagctta 45975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 4868433 - 4868548
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctc 193  Q
    ||||| ||||||| |||||| | ||||  ||||||||||||||||||| | || | |||| |||||||||||| |||||| ||||| |  ||||||  ||    
T  4868433 ttatgtaaataagttgaaaacaacttattgacatgtcataagttgttt-cataaactctctcaaacagtctcacaagtgcctatgtcaatagataaattc 4868531  T
Q  194 aagtaagtcaatccaaa 210  Q
    || ||| ||||||||||    
T  4868532 aaataaatcaatccaaa 4868548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 7200643 - 7200599
Alignment:
Q  168 aagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||||||  ||||||| ||||||||||||| |||||||    
T  7200643 aagtgcttatgttagtagataagttcaagtaagtcaacccaaata 7200599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 24417740 - 24417656
Alignment:
Q  126 atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||||||||||   | |||||  |||| ||||||| |||| ||||| |||  |||||| ||||| ||||||||||||||    
T  24417740 atgtcataagttgtttttacacattctttcaaatagtctcacaagtacttatattaatagataaactcaaataagtcaatccaaa 24417656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 25479584 - 25479633
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||||   |||||||| ||||| ||||||||||||||||||||    
T  25479584 aagttgttttcataa--gctatcctagagagcttatgaaaataagctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Original strand, 25944465 - 25944497
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacgacat 127  Q
    |||||||||||||||||||||||||||| ||||    
T  25944465 ttatgaaaataagctgaaaatagcttacaacat 25944497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 26184768 - 26184828
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    |||||||||||| ||||| |||||| ||||||| ||||||  ||||||||||||| |||||    
T  26184768 tatcctggagagcttatggaaataatctgaaaacagcttatggacatgtcataagctgttt 26184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 32859918 - 32859866
Alignment:
Q  160 agtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||| |||| |||||| ||  |||||||||||||||||||||| ||||||    
T  32859918 agtctcacaagtacttatgctagtagataagctcaagtaagtcaattcaaata 32859866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 33723419 - 33723303
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctc 193  Q
    ||||| |||||||||||||| | || | || |||||||| || ||||| | ||  || |||||| |||||||| ||||| ||||| ||  ||||||| ||    
T  33723419 ttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataagttc 33723320  T
Q  194 aagtaagtcaatccaaa 210  Q
    || ||||||||||||||    
T  33723319 aaataagtcaatccaaa 33723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 33976271 - 33976327
Alignment:
Q  154 ccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||| |||||| ||||||| |||| || | |||||||||| ||||||||||||||    
T  33976271 ccaaactgtctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaa 33976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 35058484 - 35058400
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtc 163  Q
    |||||| ||||||  ||| |||| ||||||||||| |||||||| |||||| ||||||| ||||  ||  |||||||||||||||    
T  35058484 gctatcttggagaacttacgaaagtaagctgaaaacagcttacgaacatgtaataagttattttagtaagttctcccaaacagtc 35058400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 35707280 - 35707216
Alignment:
Q  50 ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||| |||||||  ||||||||| || | ||||||| |||| ||||||||||| ||||||||    
T  35707280 ataaaattaagtcaaactgttttcatgtaagttatcctgtagagcttatgaaaatatgctgaaaa 35707216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 37654718 - 37654778
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttt 141  Q
    |||| |||||||||||  | |||||||| |||||||| ||| |||||||||||||||||||    
T  37654718 tatcgtggagagtttaaaataataagctaaaaatagcatacagacatgtcataagttgttt 37654778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 46252734 - 46252674
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgt 139  Q
    |||||| ||||||| |||||||||||| ||||||| | |||| | ||||||||||||||||    
T  46252734 gctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgt 46252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 51929467 - 51929383
Alignment:
Q  126 atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||| ||||||| ||  |||||  ||||||| ||| | |||||||||| |  ||||||||||||  |||||||||||||    
T  51929467 atgtcataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 20672729 - 20672867
Alignment:
Q  40 tataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagtt 137  Q
    |||||||||| |||||||||||||||  ||||||  |||| |||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||      
T  20672729 tataacaaaagataaaataaagtcaaactgtttt--tataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagca 20672826  T
Q  138 gttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||  |  ||  ||||||||||||||||| |||||||||||    
T  20672827 gttaacacagtctctcccaaacagtctcagaagtgcttatg 20672867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 44236868 - 44236776
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||||| |||||||||||||||||||||| |||| || |||||| | || | ||||| ||||||||||| |||||||||| |||||||||||    
T  44236868 tggagagcttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcacaagtgcttatg 44236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 39551276 - 39551128
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacag 161  Q
    ||||||||||||||   ||| |||||||||| |||| |||||||| | |||| |||||  | |||||||||||||||||| | || ||||||||||||||    
T  39551276 aagttgttttcataa--gctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacag 39551179  T
Q  162 tctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    | ||| || ||||||| |    |||||| ||||| ||||||||||||||||    
T  39551178 tttcacaaatgcttatatccgtagataatctcaaataagtcaatccaaata 39551128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 43368742 - 43368621
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagata 188  Q
    |||||| ||||||||||| ||||||||||| | | |||||||||||||||||||| ||   | |  ||| |||||||| || |||||||||||  |||||    
T  43368742 agagttcatgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttagtagata 43368643  T
Q  189 agctcaagtaagtcaatccaaa 210  Q
    || |||| ||||||||||||||    
T  43368642 agatcaaataagtcaatccaaa 43368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 42215362 - 42215275
Alignment:
Q  76 atatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc-ttagattctcccaaacagt 162  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||| | ||| |||||||| ||||||| |||| ||||||||||||||    
T  42215362 atatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattag-ttctcccaaacagt 42215275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 34770930 - 34771017
Alignment:
Q  123 gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||||| ||||||| |||  |||| |||||||| ||| ||||||||||| || ||||||| ||||| |||||||| |||||    
T  34770930 gacatgtcataagctgttttcataggatctctcaaacagtttcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaa 34771017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 2488015 - 2487929
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||| ||||||||||||| ||  |||||||||||||||||| |||||||||||| |  |||| | ||||| |||| |||||||||    
T  2488015 acatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaa 2487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 4560541 - 4560651
Alignment:
Q  101 aaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaa 199  Q
    |||||| ||||||| ||||||| ||||||| ||||||| ||| | ||  |||| |||||||  |||| |||||||||||| |  |||||||||||| |||    
T  4560541 aaataatctgaaaacagcttactgacatgttataagttatttccataagttcttccaaacaacctcacaagtgcttatgtcaatagataagctcaaataa 4560640  T
Q  200 gtcaatccaaa 210  Q
    |||||||||||    
T  4560641 gtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 21653099 - 21653210
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | || |||||||||||| ||||  || ||||  |||||||||||| |||||| ||||    
T  21653099 gctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagttgatttc-caggttct--caaacagtctcacaagtgc-tatg 21653194  T
Q  179 ttatcagataagctcaa 195  Q
    | || ||||||||||||    
T  21653195 taat-agataagctcaa 21653210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 23996679 - 23996622
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcataagtt 137  Q
    |||||||| ||||| ||||||||||||||| |||| | ||||||||||||||||||||    
T  23996679 gctatcctagagagcttatgaaaataagctaaaaacaacttacgacatgtcataagtt 23996622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 7646232 - 7646324
Alignment:
Q  88 ggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    |||||| ||||| ||||||||||||||||||| | | ||||||||||||  |||||| || ||||||||||||| | |||  |||||||||||    
T  7646232 ggagagcttatggaaataagctgaaaatagctgatcaacatgtcataagcagttttcataaattctcccaaacattgtcactagtgcttatgt 7646324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 12972878 - 12972974
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttat 177  Q
    |||||||||||||||||||||||||||  |||  ||||||  || |||||||||| ||||||| ||   ||||||||||||||||| || |||||||    
T  12972878 tatcctggagagtttatgaaaataagccaaaaccagcttatagatatgtcataagctgttttcataatatctcccaaacagtctcacaaatgcttat 12972974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 32841022 - 32840905
Alignment:
Q  96 tatgaaaataagctgaaaatagcttacgac--atgtcataagttgttttcttagattctcccaaacagtct--caaaagtgcttatgttatcagataagc 191  Q
    ||||||||||||||||||| | |||| ||   |||||||||||||||||| ||  ||||||||||||||||  |||||   ||| ||| |  ||||||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaa---cttgtgtgagtagataagc 32840926  T
Q  192 tcaagtaagtcaatccaaata 212  Q
    |||||||||||||| ||||||    
T  32840925 tcaagtaagtcaattcaaata 32840905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 7714260 - 7714391
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||| | ||||||||||| |||||| |||| | |||||| ||||||||||||| |  |   | | ||||||||||||| ||||| |||||    
T  7714260 gctatcttggagagctcatgaaaataagttgaaaacagctcatcgacatttcataagttgtttccacaagcttttccaaacagtctcacaagtgtttatg 7714359  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
      || | |||||||||| ||||||||||||||    
T  7714360 acattatataagctcaaataagtcaatccaaa 7714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 9700028 - 9700150
Alignment:
Q  89 gagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagat 187  Q
    ||||| ||||||||||||| |||||| |||||| | ||||||||||| ||| ||||  |   |||| |||| ||||||| ||||| ||||| ||  ||||    
T  9700028 gagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagat 9700127  T
Q  188 aagctcaagtaagtcaatccaaa 210  Q
    |||||||| ||||| ||||||||    
T  9700128 aagctcaaataagttaatccaaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 11415172 - 11415274
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||| |||||||| |||||||||||||| |||||||||  ||||||| ||||| ||||| | || | ||||  ||||| ||||| |||| ||||||    
T  11415172 gctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctctaaaacaatctcacaagtacttatg 11415271  T
Q  179 tta 181  Q
    |||    
T  11415272 tta 11415274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 25869318 - 25869240
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaa 157  Q
    |||||| ||||||||||||| |||||||||||||| | ||||  ||||||||||||||| ||| | |||| ||||||||    
T  25869318 gctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttccatagactctcccaa 25869240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 33553230 - 33553389
Alignment:
Q  50 ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttaga 148  Q
    ||||||||||||||| ||||||||  ||| |||||| || |||| ||||| ||||||||||  || ||||||  |||||||||||||||| ||   ||      
T  33553230 ataaaataaagtcaaattgttttc--ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 33553327  T
Q  149 ttctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
     ||| ||||||||  ||| |||||||||||||   |||||||||||| ||||  ||||||||    
T  33553328 ctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagctaatccaaa 33553389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 27028849 - 27028890
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  27028849 gctatcttggagagcttatgaaaataagctgaaaatagctta 27028890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 3090164 - 3090228
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttc 143  Q
    |||||| ||||||| || |||||| |||||||||| ||||||| |||||| ||||||||||||||    
T  3090164 gctatcatggagagcttgtgaaaacaagctgaaaacagcttactgacatgccataagttgttttc 3090228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 14949842 - 14949971
Alignment:
Q  37 ttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataa 134  Q
    ||||||||||||| |||||||| ||||||  | ||||||||   ||||||||  |||| ||||  |||||||||||||| |||||| | |||||||||||    
T  14949842 ttctataacaaaagataaaatagagtcaaactcttttcataa--gctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataa 14949939  T
Q  135 gttgttttcttagattctcccaaacagtctca 166  Q
    ||| ||||| ||   ||||| |||||||||||    
T  14949940 gttattttcataagctctcctaaacagtctca 14949971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 39866800 - 39866724
Alignment:
Q  66 ttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    ||||||||||||| |||||| || |||| |||||||||||| ||||||| ||||||  ||||||  |||||||||||    
T  39866800 ttgttttcatataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttgttt 39866724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 41606953 - 41606857
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttat 177  Q
    |||||| ||||| ||||| |||||||||||||| | |||  || ||||||||||| ||||||| ||| ||||||||||| || ||| || |||||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttttcgtagtttctcccaaactgtttcacaaatgcttat 41606857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 2482902 - 2482981
Alignment:
Q  101 aaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    |||||||||||||| |||||| || | | || | |||||||||||||  |||||||||||||||||| ||| ||||||||    
T  2482902 aaataagctgaaaacagcttatgaacttatcgtgagttgttttcttaagttctcccaaacagtctcacaagggcttatgt 2482981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 11183563 - 11183626
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgtttt 142  Q
    |||| ||||||||| ||||| |||||||||||||| ||||||  ||||| ||||||||||||||    
T  11183563 gctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttt 11183626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 30918138 - 30918217
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacgacatgtcataagttgttttcttagattctcccaaacagtctca 166  Q
    ||||||| ||||| |||||||||||||| | |||| || |||||| ||||||||||| ||   |||| ||||||||||||    
T  30918138 tggagagcttatggaaataagctgaaaacaacttatgaaatgtcacaagttgttttcataagctctctcaaacagtctca 30918217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 5349708 - 5349661
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  5349708 atttctataacaaaaa--aaataaagtcacattgttttcatatatgctat 5349661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 6950350 - 6950468
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagata 188  Q
    |||| ||||| |||||||||||||| | |||| |||||||||||| ||||||| | ||   ||||||||||| ||||| || || |||||  |  |||||    
T  6950350 agagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagata 6950449  T
Q  189 agctcaagtaagtcaatcc 207  Q
    | ||||| |||||||||||    
T  6950450 aactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 10758294 - 10758178
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacgaca--tgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagct 192  Q
    ||||||||| |||||||||| |||||  || |  ||||||||| ||||||| || |||||  |||||||||||| ||   ||||||||| |||||||| |    
T  10758294 ttatgaaaacaagctgaaaaaagcttttgaaaattgtcataagctgttttcataaattctatcaaacagtctcacaa-aacttatgttagcagataagtt 10758196  T
Q  193 caagtaagtcaatccaaa 210  Q
    ||| ||||||||| ||||    
T  10758195 caaataagtcaattcaaa 10758178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 11569509 - 11569395
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||| || ||||||||||||||||| | |||| | |||||||||||| ||||| | ||   ||||  ||||||||||| ||||| |||||    
T  11569509 gctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatg 11569410  T
Q  179 ttatcagataagctc 193  Q
      | |||||||||||    
T  11569409 ccagcagataagctc 11569395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 26473819 - 26473740
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc 143  Q
    ||||||||||||||   |||||||| ||||| ||||||||||||| | ||| |||||||  ||||||||||||| |||||||    
T  26473819 aagttgttttcataa--gctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttc 26473740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 34849136 - 34849221
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacga-catgtcataa-gttgttttc-ttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||| |||| |||||||||  ||||| || |||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  34849136 ttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattag-ttctcccaaacagtctcaaaagtacttatg 34849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 43393753 - 43393691
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||||||||||||||| || ||  |  ||||||||| || ||||||||||||||||    
T  43393753 tctcccaaacagtctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaata 43393691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 8062542 - 8062583
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||| | |||||||||||||||||||||| ||||||||||    
T  8062542 gctatcttagagagtttatgaaaataagctggaaatagctta 8062583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 31885111 - 31885013
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||| ||||| |||  |||||||||||||||||||||| | | |||||||||| ||| |||  |  || ||||||||| ||||| |||||||||||    
T  31885111 gctatcctagagagctta--aaaataagctgaaaatagcttatgaatatgtcataagctgtcttcggatgttttcccaaacactctcacaagtgcttatg 31885014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 34290888 - 34290921
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||||| ||||||||||||||||||    
T  34290888 ctatcctggagagttaatgaaaataagctgaaaa 34290921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 1433566 - 1433602
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaata 116  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  1433566 gctatcctggagagcttatgaaaataagttgaaaata 1433602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 3254238 - 3254310
Alignment:
Q  75 tatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttctta 146  Q
    |||| ||||||||  ||||| |||  |||||||||||||| |||||| | |||||||||||| ||||||||||    
T  3254238 tataagctatcctatagagtgtatagaaataagctgaaaacagcttatgaacatgtcataagctgttttctta 3254310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 3537151 - 3537099
Alignment:
Q  33 caatttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| |||| |||||    
T  3537151 caatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctat 3537099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 11059710 - 11059650
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||| ||||||| | |||||||||||| || |||||||||||  ||||||||| ||||    
T  11059710 tctcccagacagtcttataagtgcttatgtcattagataagctcacataagtcaattcaaa 11059650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 13561430 - 13561386
Alignment:
Q  35 atttctataaca-aaaataaaataaagtcaagttgttttcatata 78  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||    
T  13561430 atttctataacagaaaattaaataaagtcaaattgttttcatata 13561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 18331815 - 18331863
Alignment:
Q  162 tctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||| ||||||||||||||  ||||||| |||| ||||||||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaa 18331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 31875637 - 31875585
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    |||| ||||||||||||| ||||||| |||||  |||||||||||||||||||    
T  31875637 agagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgttt 31875585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 38307680 - 38307744
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||||| ||||||  |||||||||||||| |||| ||||||| | ||||||||| ||||||||||    
T  38307680 gctatcttggagaaattatgaaaataagccgaaagtagcttatgcacatgtcattagttgttttc 38307744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 43529907 - 43529779
Alignment:
Q  83 atcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgtta 181  Q
    ||||| ||||| |||||||||||| |||||||||||||| || |||| |||||| ||||||| || ||||||||||||||| ||| ||||||||||   |    
T  43529907 atcctagagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttatacca 43529808  T
Q  182 tcagataagctcaagtaagtcaatccaaa 210  Q
      |||||||||||| ||||||||| ||||    
T  43529807 atagataagctcaaataagtcaattcaaa 43529779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 12313225 - 12313126
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||| ||||||||||||| |||||  | |||| || |||| |||||| ||||||| || ||||||||||||| ||||| |||||||||||    
T  12313225 gctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctcacaagtgcttatg 12313126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 17775508 - 17775389
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacgacatgtcat-aagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagata 188  Q
    ||||||||||||||||||||||||| |||||| || ||||||| ||  ||||||| || |  ||| |||||||||| ||||| |||||||| |  |||||    
T  17775508 agagtttatgaaaataagctgaaaacagcttaagaaatgtcataaaactgttttcataaaccctctcaaacagtcttaaaagagcttatgtcagtagata 17775409  T
Q  189 agctcaagtaagtcaatcca 208  Q
     |||||| ||||| ||||||    
T  17775408 tgctcaaataagttaatcca 17775389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 13866942 - 13867027
Alignment:
Q  125 catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||| ||||||||||||  ||||| |||||||||||| ||||| |||||  |  |||||||||||| || |||||||||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaa 13867027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 28803538 - 28803449
Alignment:
Q  123 gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||||||||||| | ||  ||||| |||||||||||| | |||||||||     |||||||||||| ||||||||||||||||    
T  28803538 gacatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaata 28803449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 22878187 - 22878247
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||||||||| |||||||||||| |   ||||||||||| ||||||||||||||    
T  22878187 tctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 31228919 - 31228827
Alignment:
Q  50 ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    ||||||||||| ||| ||||||||||||| | |||| ||||||||||||| |||||| || |||| ||||||   ||||||||||| ||||||    
T  31228919 ataaaataaaggcaaattgttttcatataagttatcatggagagtttatggaaataacctaaaaacagcttatatacatgtcataaattgttt 31228827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 33931577 - 33931493
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatcca 208  Q
    ||||||||||||||| ||||||   |||||||||||||  ||| ||||||||||| ||| || ||||||||| ||||| ||||||    
T  33931577 acatgtcataagttgatttcttttgttctcccaaacagagtcacaagtgcttatgctattaggtaagctcaaataagttaatcca 33931493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 206
Target Start/End: Original strand, 9478317 - 9478444
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||||| ||| || |||| |||||| |||||| | |||||| ||||||||||| | || | |||| ||||||||| || |||| ||||||    
T  9478317 gctatcgtggagagttgatggaagtaagatgaaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtcacacaagtacttatg 9478416  T
Q  179 ttatcagataagctcaagtaagtcaatc 206  Q
    ||   ||||||| |||| ||||||||||    
T  9478417 ttggtagataagttcaaataagtcaatc 9478444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 15120201 - 15120332
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||| |||| |||||||||| |||| |||| | || ||||||||||||||||| | ||   ||||||||||||  ||| || || |||||    
T  15120201 gctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacagattcacaactgtttatg 15120300  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
     ||  ||||||| |||| ||||||||||||||    
T  15120301 ctagtagataagttcaaataagtcaatccaaa 15120332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 18179292 - 18179161
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||||||||  ||| ||||||||||||||||||||| |  |||||||| |||| ||||||| || |  || |||||||  || | |||||||||||    
T  18179292 gctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacacttccaaacaaacttacaagtgcttatg 18179193  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
    | |  ||||||||| || |||| |||||||||    
T  18179192 taactagataagcttaaataagccaatccaaa 18179161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 40158742 - 40158869
Alignment:
Q  86 ctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatca 184  Q
    |||||||| ||||| || ||||||||||| | ||||  | ||||||||||| ||||||| ||  ||| ||||| |||||||| |||| ||||||| |  |    
T  40158742 ctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtctcacaagttcttatgtcagta 40158841  T
Q  185 gataagctcaagtaagtcaatccaaata 212  Q
    |||| |||||| |||| |||||||||||    
T  40158842 gatatgctcaaataagccaatccaaata 40158869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 787363 - 787449
Alignment:
Q  93 gtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||||| | |||||||||||| |||||| | |||||||||||| ||||||| ||  ||||| |||||||| ||| |||||||||||    
T  787363 gtttatggagataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatg 787449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 33192220 - 33192345
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||||||||| |||| || |||||||||||| ||||||  || |||||||||  ||||||| ||  ||||  ||||||||||||  |||| |||||    
T  33192220 gctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataagttct-tcaaacagtctcatgagtgtttatg 33192318  T
Q  179 ttatcagataagctcaagtaagtcaat 205  Q
    | | ||||||||||||| |||| ||||    
T  33192319 tcagcagataagctcaaataagccaat 33192345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 40776102 - 40776020
Alignment:
Q  126 atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatcca 208  Q
    |||||||||| ||||||| ||  |||| ||||||||  | | ||||||||||||||  |||||| ||||||||||||||||||    
T  40776102 atgtcataagctgttttcataagttcttccaaacaggtttataagtgcttatgttagtagataaactcaagtaagtcaatcca 40776020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 41817187 - 41817269
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagt 162  Q
    ||||||||||||| ||||| |||||||||||||| |  ||| | |||||||||||| ||||||| || ||||||| |||||||    
T  41817187 ctatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcctaaacagt 41817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 40837546 - 40837358
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatat-------------gctatcctggagagtttatgaaaataagctgaaaatagct- 119  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||             |||||| || |||| ||||| |||||||||||||||||||     
T  40837546 atttctataacaaaagataaattaaagtcaaattgttttcatatatgttgttttaataagctatcatgtagagcttatggaaataagctgaaaatagcta 40837447  T
Q  120 --tacgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
       || | |||||||||| ||||||| || | ||||||||||||||||    ||| |||||| |  |||||||||||| |||| |||||||||    
T  40837446 tggacaatatgtcataagatgttttcataaactctcccaaacagtctc----gtgtttatgtcagtagataagctcaaataagccaatccaaa 40837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 41851553 - 41851641
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacgaca--tgtcataagttgttttcttagattctcccaaacagtctca 166  Q
    |||||| |||||| ||||||||| |||||||| || |||||| || |  ||||||||||||||| | || |||||||||| ||||||||    
T  41851553 gctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttgtttccataaattctcccaatcagtctca 41851641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 40943977 - 40944069
Alignment:
Q  125 catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaatatacct 217  Q
    ||||||||||| ||||||| || | | | ||||||||| ||| |||||||||||| || |||||| ||||| ||||  |||||||| ||||||    
T  40943977 catgtcataagctgttttcataaacttttccaaacagtttcacaagtgcttatgtcattagataaactcaaataagctaatccaaacatacct 40944069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 42419859 - 42419942
Alignment:
Q  126 atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||| ||||||| ||  |||||||||||||||||||||   ||||||| |  |||||| ||||| ||||||||||||||    
T  42419859 atgtcataagctgttttcgtaagttctcccaaacagtctcaaaa-aacttatgtcagaagataaactcaaataagtcaatccaaa 42419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 8017452 - 8017583
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||  ||||||||||| || ||||| |  ||| || ||| ||||||| ||||||| ||  |||||||||| | || || |||||||||||    
T  8017452 gctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttctcccaaataatcgcacaagtgcttatg 8017551  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
    | |  |||||| ||||| ||||||||||||||    
T  8017552 tcaatagataacctcaaataagtcaatccaaa 8017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 9174843 - 9174897
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacga--catgtcataagttgtttt 142  Q
    |||| ||||||||||||||||||||||||||| ||   |||||||||||||||||    
T  9174843 agagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgtttt 9174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 32106849 - 32106754
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgctta 176  Q
    ||||||| |||| ||||||| ||||  |||||| ||||||| || |||||||||| ||||||| ||  ||||| |||||||||||| ||| |||||    
T  32106849 tatcctgaagagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtctcataagagctta 32106754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 39983345 - 39983401
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    ||||||||||||||   |||||||||||||| | |||||||||| ||||||||||||||    
T  39983345 aagttgttttcataa--gctatcctggagagctaatgaaaataaactgaaaatagctta 39983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 1742083 - 1741997
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctca 166  Q
    ||||| || |||||||||| ||||||| |||| |||||||| | |||||||||||||||||| | ||   ||||||||| |||||||    
T  1742083 ctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcccaaatagtctca 1741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 4350753 - 4350839
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||||| ||||||| ||  ||||| |||||| ||||  |||||||||||| |  ||| |||||||| |||| |||||||||    
T  4350753 acatgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtagagaagctcaaataagccaatccaaa 4350839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 5133799 - 5133853
Alignment:
Q  89 gagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgtttt 142  Q
    ||||| ||||| ||||||||||||| ||||||| || ||||||||||||||||||    
T  5133799 gagagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttt 5133853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 15370302 - 15370244
Alignment:
Q  152 tcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||||||| || ||||||||  |  |||||||||||| ||||||||||||||    
T  15370302 tcccaaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaa 15370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34652088 - 34652026
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttt 141  Q
    |||||| ||||||| ||||| ||||||| |||||| |||||| | ||||||||||||||||||    
T  34652088 gctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgttt 34652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 35485920 - 35486035
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacag 161  Q
    ||||||||||  |||| ||||||||| ||||  |||| |||| ||||||||| |||||| || ||| |||||||||| |||  ||  ||||| |||||||    
T  35485920 aagttgtttt--tataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagttgctttagtaagttctctcaaacag 35486017  T
Q  162 tctcaaaagtgcttatgt 179  Q
    ||||| |||| |||||||    
T  35486018 tctcacaagttcttatgt 35486035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 42907362 - 42907412
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaa 113  Q
    |||||||||||| |||||||| | ||||||| ||||||||||| |||||||    
T  42907362 aagttgttttcacatatgctaacttggagagcttatgaaaataggctgaaa 42907412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 1493630 - 1493581
Alignment:
Q  36 tttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    |||||||||||| | ||||||||||||| ||||||||||||||| |||||    
T  1493630 tttctataacaatagataaaataaagtctagttgttttcatataagctat 1493581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 1939384 - 1939323
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgtt 140  Q
    ||||| |||||||| ||||| ||||||| |||||| |||||| | |||||||||||||||||    
T  1939384 gctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 3973542 - 3973587
Alignment:
Q  69 ttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||| |||||||| | ||||||||| ||||||||||||||    
T  3973542 ttttcatataagctatcctagggagtttatggaaataagctgaaaa 3973587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 37053541 - 37053590
Alignment:
Q  30 agacaatttctataaca-aaaataaaataaagtcaagttgttttcatata 78  Q
    |||| |||||||||||| ||||||||||||||||||  ||||||||||||    
T  37053541 agactatttctataacagaaaataaaataaagtcaaactgttttcatata 37053590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 41293215 - 41293127
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta--cgacatgtcataagttgttttcttagattctcccaaacagtctca 166  Q
    ||||||||||||   ||||||| |||||||||||| ||||||  ||| |||||||||| ||||||  ||  |||||||||| |||||||    
T  41293215 gctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctcccaaatagtctca 41293127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 43199836 - 43199743
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtg 172  Q
    |||||| ||||| | |||||||| ||||||||||| | ||||  | ||||||| ||||||| ||| ||  |||||||||||||||||| |||||    
T  43199836 gctatcttggagggcttatgaaattaagctgaaaacaacttataaacatgtcacaagttgtattcgtaacttctcccaaacagtctcacaagtg 43199743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 43530147 - 43530042
Alignment:
Q  96 tatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctca 194  Q
    |||| ||||||| ||||||||||||  || ||||||||||  ||||||| ||  ||||||||| || ||||| |||||| |||||||  |||| ||||||    
T  43530147 tatggaaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagttctcccaagcactctcacaagtgcatatgttagtagattagctca 43530048  T
Q  195 agtaag 200  Q
    | ||||    
T  43530047 aataag 43530042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 44606147 - 44606078
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtc 163  Q
    |||||||||| ||||||||| | |||| | |||||||||||||||||||| ||  |||| ||||||||||    
T  44606147 ttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttccaaacagtc 44606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 3673759 - 3673803
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| |||||||||||| || |||||||||||||    
T  3673759 atttctataacaaaatataaaataaagttaaattgttttcatata 3673803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 10563625 - 10563556
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcata 133  Q
    ||||||||||||||   ||||| ||| |||| ||| |||||||||||||||||||||||  |||||||||||    
T  10563625 aagttgttttcataa--gctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcata 10563556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 24097828 - 24097860
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||| ||||||||||||||||||||    
T  24097828 tatcctggagagcttatgaaaataagctgaaaa 24097860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 27237938 - 27237834
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcag 185  Q
    ||||||||||||| ||||||||| |||| |||||| | |||||||||||| |||||   ||  |||| ||||||||| |||  |||| |||||| | |||    
T  27237938 tggagagtttatggaaataagctaaaaacagcttatgtacatgtcataagctgtttctataagttctaccaaacagtttcactagtgtttatgtcagcag 27237839  T
Q  186 ataag 190  Q
    |||||    
T  27237838 ataag 27237834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 33941927 - 33941991
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||||| |||||||||||||| |||||| |||||  |||||| | || |||||||||||||||||    
T  33941927 gctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttc 33941991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 12460053 - 12459922
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| || |||| ||||||||||||||  |||| | | || | |||||||||||||||||||| ||| |||||||||||||||||| | |||||||||    
T  12460053 gctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcccaaacagtctcacaggtgcttatg 12459954  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
    | | |||||||||  || ||||||||||||||    
T  12459953 tcagcagataagccgaaataagtcaatccaaa 12459922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 17258934 - 17258814
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    |||||||| |||| |||||||||||||||||||| |||||| || ||||||||||| | ||||| ||| |||||||||| | | ||| ||||||||||||    
T  17258934 ctatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaatgtcacaagtgcttatgt 17258835  T
Q  180 tatcagataagctcaagtaag 200  Q
    ||   ||||||||||| ||||    
T  17258834 tagttgataagctcaaataag 17258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 14331389 - 14331515
Alignment:
Q  84 tcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttat 182  Q
    |||||||||| |||||||||||||||||||  |||||| | |||||||||||| |||||| | || || ||| ||||| |||||| ||||||||||  |     
T  14331389 tcctggagagcttatgaaaataagctgaaatcagcttatggacatgtcataagctgttttgtaagtttttcc-aaacaatctcaagagtgcttatgacag 14331487  T
Q  183 cagataagctcaagtaagtcaatccaaa 210  Q
     |||||||||||| ||||||||||||||    
T  14331488 tagataagctcaaataagtcaatccaaa 14331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 29117048 - 29116941
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcata 133  Q
    ||||||||||||||| |||||||||||||||  ||||||| |||| ||||||||| | || ||||| |||||||||||||| || |||  || ||| |||    
T  29117048 atttctataacaaaagataaaataaagtcaaactgttttcgtataagctatcctgaaaagcttatgcaaataagctgaaaacagtttaaaacgtgtaata 29116949  T
Q  134 agttgttt 141  Q
    ||||||||    
T  29116948 agttgttt 29116941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 10272498 - 10272421
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttt 141  Q
    ||||||||||||||   || ||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  10272498 aagttgttttcataa--gccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgttt 10272421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 499775 - 499652
Alignment:
Q  88 ggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcaga 186  Q
    |||||||||||| |||||||||||||| | |||   | ||||||||||| ||||||| ||  ||||||||||||| || | | |||||||||| |  ||     
T  499775 ggagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcctaacaggtgcttatgtcagtagg 499676  T
Q  187 taagctcaagtaagtcaatccaaa 210  Q
    ||||||||| ||||||||||||||    
T  499675 taagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 11700420 - 11700332
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttat 177  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||||||||||| | || | |||||  || ||||||| ||||||||||    
T  11700420 agagtttatgaaaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctcctcaatagtctcacaagtgcttat 11700332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 32849244 - 32849327
Alignment:
Q  127 tgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||| ||||| ||  ||||||||||||| |||| ||||||||||| ||  ||||||||| || ||||||||| ||||    
T  32849244 tgtcataagtttttttcataagttctcccaaacagcctcacaagtgcttatgatagtagataagcttaaataagtcaattcaaa 32849327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 8089964 - 8090082
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagata 188  Q
    |||| |||||||||||||||||||| |||||| | | || ||||||||||||||| ||   |||| |||| ||||||   ||||||| |||||  |||||    
T  8089964 agagcttatgaaaataagctgaaaacagcttaggaatatatcataagttgttttcataagctctctcaaatagtctcgcgagtgcttgtgttagtagata 8090063  T
Q  189 agctcaagtaagtcaatcc 207  Q
    || |||| |||||||||||    
T  8090064 agttcaaataagtcaatcc 8090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 3970732 - 3970691
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  3970732 gctatactggagagcttatgaaaataagctgaaaatagctta 3970691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 39105482 - 39105562
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacga--catgtcataagttgttttcttagattctcccaaa 158  Q
    |||||| ||||||  ||||||||||||||| ||||||||||| ||   |||||||||| ||||||| || |||||||||||    
T  39105482 gctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcccaaa 39105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 985585 - 985665
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||| ||||||||| |||||||||||||||  |||||||| ||| |||||| || ||||  |||| ||||||||||||||    
T  985585 atttccataacaaaagataaaataaagtcaaactgttttcacataagctatcatgaagagactatggaaataagctgaaaa 985665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 36796684 - 36796628
Alignment:
Q  154 ccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||| |||||||| ||||| |||||| || |||||||||||| ||||||||||||||    
T  36796684 ccaagcagtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaa 36796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 2568661 - 2568773
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacag 161  Q
    ||||||||||||||   |||||| ||||||| | ||||||||||||| |||||| |||| | | |||||||||| ||||||| ||  |||| | ||||||    
T  2568661 aagttgttttcataa--gctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttcttctaaacag 2568758  T
Q  162 tctcaaaagtgctta 176  Q
    ||||  |||||||||    
T  2568759 tctctcaagtgctta 2568773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 10125763 - 10125708
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    ||||||| |||||||||||||||||||| | |||| | ||||||||||||||||||    
T  10125763 tggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 17369068 - 17369005
Alignment:
Q  51 taaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||||| || ||| ||||||||||||| |  ||||||||| ||||||| |||||||    
T  17369068 taaaataaagtcaaattttttccatatatgctatcttaaagagtttataaaaataatctgaaaa 17369005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 28586818 - 28586687
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| || |||||||||| | ||| | ||   ||||||||||||| ||| || ||||||||    
T  28586818 gctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcacaaatgcttatg 28586719  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
     ||| |||  || |||| | ||||||||||||    
T  28586718 ctattagactagttcaaattagtcaatccaaa 28586687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 32172692 - 32172787
Alignment:
Q  101 aaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaa 195  Q
    ||||||||||||||| ||||| | |||||||||||||||||| | ||   ||||||||||  ||||| ||||||||||| ||  | ||||||||||    
T  32172692 aaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaa 32172787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 342446 - 342380
Alignment:
Q  76 atatgctatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttt 141  Q
    |||||||||||||| |||||| || |||||||||||||| | |||||  |||||||||| |||||||    
T  342446 atatgctatcctggtgagtttgtggaaataagctgaaaacaacttacaaacatgtcatacgttgttt 342380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 444010 - 444064
Alignment:
Q  149 ttctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtca 203  Q
    |||||||||||||||||| ||||| |||||  || |||||||||||| |||||||    
T  444010 ttctcccaaacagtctcacaagtgtttatgcaattagataagctcaaataagtca 444064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 7907906 - 7908016
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacgac-atgtca-taagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatca 184  Q
    ||||||| |||||||| ||||||||||| | |||| ||  || ||| || ||||||||| ||  |||| ||||||||||||| ||||| ||||||||| |    
T  7907906 tggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacagtctcataagtgtttatgttatta 7908005  T
Q  185 gataagctcaa 195  Q
    ||||| |||||    
T  7908006 gataaactcaa 7908016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 14295458 - 14295508
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| |||||    
T  14295458 atttctataacaaaagataaaataaagtcaaactgttttcatataagctat 14295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 17368679 - 17368758
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    ||||||||||||||   |||||| ||||||| ||||| ||||||||||||||  || || | ||||||||||||||||||||    
T  17368679 aagttgttttcataa--gctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttc 17368758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 37611298 - 37611203
Alignment:
Q  47 aaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttc 143  Q
    |||| ||||| || |||| |||||||||||   |||||| ||||||| ||||| |||||| ||||||| |||||| || ||||||| |||||||||||    
T  37611298 aaaagaaaatcaaatcaaattgttttcataa--gctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttc 37611203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 37788028 - 37787933
Alignment:
Q  47 aaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttc 143  Q
    |||| ||||| || |||| |||||||||||   |||||| ||||||| ||||| |||||| ||||||| |||||| || ||||||| |||||||||||    
T  37788028 aaaagaaaatcaaatcaaattgttttcataa--gctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttc 37787933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 5377234 - 5377121
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacgac-atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctc 193  Q
    ||||||||||||| ||||||| | ||||||  | |||||||| ||||||| ||  || || | |||||||| | |||||||||||| |  ||||||||||    
T  5377234 ttatgaaaataaggtgaaaatggtttacgaatacgtcataagctgttttcataagttatcgctaacagtcttacaagtgcttatgtcaatagataagctc 5377135  T
Q  194 aagtaagtcaatcc 207  Q
    || |||| ||||||    
T  5377134 aaataagccaatcc 5377121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 7984987 - 7985028
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  7984987 gctatcttggagaatttatgaaaataagctgaaaacagctta 7985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 8177587 - 8177550
Alignment:
Q  77 tatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  8177587 tatgctatcctggagagcttatgaaaataacctgaaaa 8177550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 10303753 - 10303794
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcat 75  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  10303753 atttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 12242806 - 12242728
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||| |||||||||| |||||||| |||||| |||||||||||   |||||| ||||||| ||||| || |||||||||||    
T  12242806 atttgtataacaaaagataaaatagagtcaaattgttttcataa--gctatcttggagagcttatggaagtaagctgaaaa 12242728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 31208500 - 31208621
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagata 188  Q
    |||| ||||||||||||||| |||| || |||| |||||  |||||||||||||  |  | |||||||||||||||||   |||||||||| |  || |     
T  31208500 agagcttatgaaaataagctaaaaacagtttacggacattacataagttgtttttatgaactctcccaaacagtctcacgggtgcttatgtcagtagttc 31208599  T
Q  189 agctcaagtaagtcaatccaaa 210  Q
    || |||| ||||||||||||||    
T  31208600 agttcaaataagtcaatccaaa 31208621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 11297233 - 11297117
Alignment:
Q  95 ttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctc 193  Q
    ||||||||||||||||||||||||| |  |||||||| |||||||||| | ||   |||  |||||||||| | ||||| |||||  |  |||||||||     
T  11297233 ttatgaaaataagctgaaaatagctaattgacatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  194 aagtaagtcaatccaaa 210  Q
    || ||||||||| ||||    
T  11297133 aaataagtcaattcaaa 11297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 17827542 - 17827606
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||||| | ||||| ||| ||||||||||||||||||  ||||| |||| |||||||||||||||    
T  17827542 gctatcttagagaggttacgaaaataagctgaaaataatttacgaacatttcataagttgttttc 17827606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 28586884 - 28586840
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||    
T  28586884 atttctataacaaaagataaaataaagtcaaactgttttcatata 28586840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 32194194 - 32194154
Alignment:
Q  40 tataacaaaa-ataaaataaagtcaagttgttttcatatat 79  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  32194194 tataacaaaatataaaataaagtcaagatgttttcatatat 32194154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 36318777 - 36318854
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctt-acgacatgtcataagttgttt 141  Q
    ||||||||||||||   |||||| |||||| |||||| |||||||||||||| ||||| || | |||| |||||||||||    
T  36318777 aagttgttttcataa--gctatcttggagaatttatgtaaataagctgaaaacagcttaacaagatgtaataagttgttt 36318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 36774787 - 36774726
Alignment:
Q  50 ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaa 113  Q
    |||||| ||||||||  ||||||  |||| |||||||||||||| ||||| |||||||||||||    
T  36774787 ataaaacaaagtcaaactgtttt--tataagctatcctggagagcttatggaaataagctgaaa 36774726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 2996576 - 2996691
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacag 161  Q
    ||||||||||||||   |||||| |||||||  |||||||||||| |||||| |||||| | |||||||||||||||||||| ||   |||| |||||||    
T  2996576 aagttgttttcataa--gctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacag 2996673  T
Q  162 tctcaaaagtgcttatgt 179  Q
    ||||||||||||||||||    
T  2996674 tctcaaaagtgcttatgt 2996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 6987793 - 6987662
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||||||||| ||||| ||||||| ||||||||| |||  ||||||||||||||||| | | ||   ||||||||||||||||| ||   ||||||    
T  6987793 gctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcacaaacacttatg 6987694  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
     ||  |||||| ||||| ||||||||| ||||    
T  6987693 ctagtagataaactcaattaagtcaatacaaa 6987662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 19304951 - 19305082
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcag 185  Q
    ||||||||| ||| ||| |||||||||| | |||| | |||||||||||| ||||| |  | ||||||||| ||| ||||| || ||||||||| |  ||    
T  19304951 tggagagttaatggaaacaagctgaaaacaacttatggacatgtcataagctgtttccacaaattctcccacacaatctcacaaatgcttatgtcaatag 19305050  T
Q  186 ataagctcaagtaagtcaatccaaatatacct 217  Q
    |||| ||||| |||||||||||||||| ||||    
T  19305051 ataatctcaaataagtcaatccaaatacacct 19305082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 19429706 - 19429768
Alignment:
Q  59 agtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||    
T  19429706 agtcaaattgttttgatataagctatcctggagagcttatggaaataagctgaaaacagctta 19429768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 18628555 - 18628472
Alignment:
Q  129 tcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||||||| ||   ||||||||||||||||| ||||| |||||| |  |||||||||||| || ||||||| |||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaatacgtcaatctaaata 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 25487663 - 25487576
Alignment:
Q  35 atttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||| ||||| |||| ||  ||||| ||||||| ||| || ||||||    
T  25487663 atttctataacaaaaaataaaataaagtcacgtttttttcatataagctattctggggaacttatggaaataagttgataacagctta 25487576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 19422370 - 19422472
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcat 132  Q
    ||||||||||||||| ||| |||||||||||    ||||||||||  ||||||||||||| ||||| ||||||| |||||| ||| || | |||||||||    
T  19422370 atttctataacaaaagatataataaagtcaaacatttttcatataaactatcctggagagcttatggaaataagttgaaaaaagcgtatgcacatgtcat 19422469  T
Q  133 aag 135  Q
    |||    
T  19422470 aag 19422472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 32831549 - 32831439
Alignment:
Q  101 aaataagctgaaaatagcttacgac-atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaa 199  Q
    |||||||||||||||| |||| ||  |||| ||||||||||||| |   ||||||||||  || |||||||||||||||| |  |||||||||||| | |    
T  32831549 aaataagctgaaaatatcttatgaatatgttataagttgttttcatctgttctcccaaaaggtatcaaaagtgcttatgtcagtagataagctcaaatga 32831450  T
Q  200 gtcaatccaaa 210  Q
    | |||||||||    
T  32831449 gccaatccaaa 32831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 6979004 - 6978956
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagctta-cgacatgtcataagtt 137  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  6979004 agagtttatgaaaataagctgaaaacagcttatagacatgtcataagtt 6978956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 19394845 - 19394785
Alignment:
Q  50 ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctg 110  Q
    |||||||||| ||||||||||| |||||| ||||| || ||||| ||||| ||||||||||    
T  19394845 ataaaataaattcaagttgtttacatataagctatactagagagcttatggaaataagctg 19394785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 20936285 - 20936217
Alignment:
Q  76 atatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||| ||||||||||||| ||||| ||||||| |||||| |||||| | |||| |||||||||||||||    
T  20936285 atattctatcctggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgttttc 20936217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 27123397 - 27123273
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcag 185  Q
    ||||||| ||||| ||||||| |||||| | ||||  ||||||||||||||||||| | ||   |||| |||||||||||| |||| |||||| ||        
T  27123397 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagttt 27123298  T
Q  186 ataagctcaagtaagtcaatccaaa 210  Q
    |||||||||| ||||| ||||||||    
T  27123297 ataagctcaaataagttaatccaaa 27123273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 28615536 - 28615668
Alignment:
Q  75 tatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgtt-ttcttagattctcccaaacagtctcaaaagtg 172  Q
    |||| |||||| ||||||| ||||| ||||||| |||||||| || | | ||||||||||||||| | ||||||   ||| | ||||||||| | || ||    
T  28615536 tataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttggtattcttaagctcttcgaaacagtcttacaaatg 28615635  T
Q  173 cttatgttatcagataagctcaagtaagtcaat 205  Q
    ||||||| || |||||||||||| |||| ||||    
T  28615636 cttatgtcattagataagctcaaataagccaat 28615668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 17822932 - 17822786
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg--acatgtcataagttgttttcttagattctcccaaaca 160  Q
    ||||||||||||||   |||||| ||||||  ||||||||||||||| |||| |||||| |  | |||||||||| ||||||| ||  |||||| ||| |    
T  17822932 aagttgttttcataa--gctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaata 17822835  T
Q  161 gtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||| | ||  ||||||| |  |||||||||||| ||||| ||||||||    
T  17822834 gtctc-acagaacttatgtcagtagataagctcaaataagttaatccaaa 17822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 29467675 - 29467620
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataag 135  Q
    ||||||| ||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  29467675 ctatcctagagagtttatggaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 44249304 - 44249367
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc 143  Q
    ||||| |||||||||||||||||||||||||| | | |||| | |||||||||||| |||||||    
T  44249304 ctatcttggagagtttatgaaaataagctgaagaaaacttatcaacatgtcataagctgttttc 44249367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 1312860 - 1312990
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    ||||| ||||||||||||| |||||||||||||| || ||| | | |||| ||||||||||||| || | |||  ||||||||| || |  ||||||||     
T  1312860 ctatcttggagagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttttcgtaaactctatcaaacagtcacacacatgcttatgc 1312959  T
Q  180 tatcagataagctcaagtaagtcaatccaaa 210  Q
     |  |||||||  ||| ||||||||||||||    
T  1312960 cagtagataagtgcaaataagtcaatccaaa 1312990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 4071834 - 4071884
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  4071834 atttctataacaaaagataaaataaagtcaaattattttcatataagctat 4071884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 5131345 - 5131268
Alignment:
Q  40 tataacaaaa-ataaaataaagtcaagttgttttcatatat--gctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||| |||||||||||| ||  ||||||||| ||   |||||||||||||| ||||| ||||||||||||||    
T  5131345 tataacaaaagataaaataaagttaaaatgttttcatgtaaaagctatcctggagagcttatggaaataagctgaaaa 5131268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 20936125 - 20936042
Alignment:
Q  30 agacaatttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||| ||||||||||||||| |||||||||||||||  | ||||||| || |||||  | | |||||||||| |||||||||||||    
T  20936125 agactatttctataacaaaagataaaataaagtcaaactattttcatgtaagctat--tagtgagtttatgagaataagctgaaaa 20936042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 21523591 - 21523659
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacgaca--tgtcataagttgttttcttagattctcccaaacagt 162  Q
    |||||||||||||||||||| |||||| || |  ||||||||||||||||| || ||||| |||||||||    
T  21523591 ttatgaaaataagctgaaaa-agcttatgaaaaatgtcataagttgttttcataaattcttccaaacagt 21523659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 21952913 - 21952963
Alignment:
Q  35 atttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||| || |||||||||||||| ||||||||||||| |||||    
T  21952913 atttctataacaacaagtaaaataaagtcaaattgttttcatataagctat 21952963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 30024652 - 30024702
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| |||||||||||| || ||||||||||||| |||||    
T  30024652 atttctataacaaaagataaaataaagtaaaattgttttcatataagctat 30024702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 36577549 - 36577463
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||||||||||||  ||  |||||| ||||||||||| |||||||||| | |  ||| ||  |||| ||||||||||||||    
T  36577549 acatgtcataagttgtttttgtaagttctccgaaacagtctcacaagtgcttatctcaatagacaaattcaaataagtcaatccaaa 36577463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 48719430 - 48719388
Alignment:
Q  93 gtttatgaaaataagctgaaaatagcttacg-acatgtcataa 134  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  48719430 gtttatgaaaataagctgaaaacagcttacgaacatgtcataa 48719388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 49219091 - 49219141
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  49219091 atttctataacaaaatataaaataaagtcaaattattttcatataagctat 49219141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 22236152 - 22236055
Alignment:
Q  85 cctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgtta 181  Q
    ||||||||| |||||||||||||| ||||| |||| | | |||||||| ||| ||||||  |||  ||||||||||||| ||  ||||| ||||||||    
T  22236152 cctggagagcttatgaaaataagcagaaaacagctcatgaacatgtcacaagctgttttaataggctctcccaaacagtttcgcaagtggttatgtta 22236055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 50800061 - 50799989
Alignment:
Q  101 aaataagctgaaaatagcttac-gacatgtcataagttgttttc-ttagattctcccaaacagtctcaaaagtg 172  Q
    |||||||||||||| ||||||  ||||||||||||||||||| | |||| |||||||||||| ||||| |||||    
T  50800061 aaataagctgaaaacagcttatagacatgtcataagttgtttacattag-ttctcccaaacaatctcacaagtg 50799989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 53792590 - 53792623
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||| ||||||||||||||||||||||||||||    
T  53792590 ctatcttggagagtttatgaaaataagctgaaaa 53792623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 54986374 - 54986415
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaagttgttttcata 76  Q
    ||||||||||||||||||| |||||||||| ||| |||||||    
T  54986374 atttctataacaaaaataagataaagtcaaattgctttcata 54986415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 1017116 - 1017176
Alignment:
Q  149 ttctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaa 209  Q
    |||| ||||||||||||| ||||| |||||| |  |||| ||||||| |||||||||||||    
T  1017116 ttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 1408328 - 1408272
Alignment:
Q  123 gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    ||||||| ||||| ||||||| || |||||| |||||||||||| ||||||| ||||    
T  1408328 gacatgtaataagctgttttcataaattctctcaaacagtctcataagtgctaatgt 1408272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 4191569 - 4191613
Alignment:
Q  35 atttctataacaaaaataaaa-taaagtcaagttgttttcatata 78  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||    
T  4191569 atttctataaaaaaaataaaaataaagtcgagttgttttcatata 4191613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 7694060 - 7694028
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||||||||| ||||||||||||||    
T  7694060 tatcctggagagtttatggaaataagctgaaaa 7694028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 32421029 - 32420977
Alignment:
Q  160 agtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||| ||||||||||| ||  || ||||||||| ||||||||||||||||    
T  32421029 agtctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaata 32420977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 33534212 - 33534096
Alignment:
Q  89 gagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagat 187  Q
    ||||| |||||||||||||||||||| | ||||  || |||||| || |||||||| ||   |||| |||| | ||||| |||| ||||||| |  ||||    
T  33534212 gagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcataagctctctcaaatactctcacaagtacttatgtcactagat 33534113  T
Q  188 aagctcaagtaagtcaa 204  Q
    |||||||| ||||||||    
T  33534112 aagctcaaataagtcaa 33534096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 51210505 - 51210473
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||| ||||||||||||||||||||||||||||    
T  51210505 tatcttggagagtttatgaaaataagctgaaaa 51210473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 23214888 - 23215004
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctc 193  Q
    ||||||| |||||||||| | |||||| | | |||||||||||||||||| || |||||| |||||||||||| ||||| ||||| ||  ||||||| ||    
T  23214888 ttatgaacataagctgaatagagcttatggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtc 23214987  T
Q  194 aagtaagtcaatccaaa 210  Q
    || ||||||||||||||    
T  23214988 aaataagtcaatccaaa 23215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 25670636 - 25670512
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgtt 180  Q
    |||| ||||||| || ||||||||||||||||| |  |||  | ||||||||||||||||||| ||  || || |||||||||||| ||| ||||||||     
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtc 25670537  T
Q  181 atcagataagctcaagtaagtcaat 205  Q
    |  ||||||||||||||||||||||    
T  25670536 aatagataagctcaagtaagtcaat 25670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 33894645 - 33894776
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||||||||| |||||||  |||||||||||||| | |||| | |||||||||| | ||||||| ||   |||| |||||||||||| |||||||||||    
T  33894645 gctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatg 33894744  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
    | ||  ||||||||||| ||||  ||||||||    
T  33894745 tcatttgataagctcaaataagctaatccaaa 33894776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 39539861 - 39539771
Alignment:
Q  52 aaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttt 141  Q
    |||||||| |||| ||||||||||||| |||||||| | ||| || | ||||||||||||||| ||||||  |||||||||||||||||||    
T  39539861 aaaataaattcaaattgttttcatataagctatcctcgggagcttgtcaaaataagctgaaaacagcttatggacatgtcataagttgttt 39539771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 3836778 - 3836602
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcataa 134  Q
    ||||||||||||| | |||||| |||| || |  ||||| |||| |||||| ||||||| | ||||||||||| |||| |  ||||| |  |||||||||    
T  3836778 atttctataacaaga-taaaatcaagttaaatgattttcgtataagctatcttggagagctaatgaaaataagttgaagacggcttatgtaatgtcataa 3836680  T
Q  135 gttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    | | ||||| ||  |||||||||||||| ||| ||||||||| |  |  |||||||||||| |||| |||||||||||    
T  3836679 gctattttcataagttctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaata 3836602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 46082037 - 46082118
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc 143  Q
    |||||||||||||| | ||||| |||||||| |||||||||||||||||||| | ||||  | |||||||||||||||||||    
T  46082037 aagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttc 46082118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 8427075 - 8427164
Alignment:
Q  123 gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    |||| ||| |||||||||| | |||  || |||||||||||||| |||| |||||||||  |||||||||||| ||| ||||||||||||    
T  8427075 gacacgtcgtaagttgtttccataggctcccccaaacagtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaata 8427164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 4970792 - 4970713
Alignment:
Q  130 cataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||||||||||||| ||  |||||||||||||||||| |||  ||||||| |  |||||||||||| ||||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcacaag-acttatgtcacgagataagctcaaataagtcaatccaaa 4970713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 30535597 - 30535681
Alignment:
Q  96 tatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    ||||||||||| ||||||| ||||||||| ||| ||||||||||||||| ||  |||||| ||||||||||  ||||| ||||||    
T  30535597 tatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctctcaagtgtttatgt 30535681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 28691887 - 28691757
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||||||||  |||||||||||| |||| || |  ||| | ||| |||||||| ||||||| ||   ||||| || |||||||| || ||||||||    
T  28691887 gctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctccgaa-cagtctcacaaatgcttatg 28691789  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||| ||||||| ||||| ||||||||||||||    
T  28691788 ttagcagataaactcaaataagtcaatccaaa 28691757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 48131572 - 48131671
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    ||||||||||||| ||||||  ||||||||||||||| ||| | | ||||||||| || ||||| ||  |||| ||||||||||||| || |||||||||    
T  48131572 ctatcctggagagcttatgagtataagctgaaaatagtttatgaaaatgtcataacttattttcgtaagttcttccaaacagtctcataaatgcttatgt 48131671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 39505959 - 39506014
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctt 120  Q
    ||||||||||||||   ||||| |||||||||||||| ||||||||||||||||||||    
T  39505959 aagttgttttcataa--gctattctggagagtttatggaaataagctgaaaatagctt 39506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 42656467 - 42656541
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagc 108  Q
    ||||||||||||||| ||||||||||||||| |  ||||  |||| |||||| ||||||| ||||||||||||||    
T  42656467 atttctataacaaaagataaaataaagtcaaatcatttttgtataagctatcttggagagcttatgaaaataagc 42656541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 7244654 - 7244760
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcat 132  Q
    ||||||||| ||||| |||||| ||||||||  ||||||||||   |||||  ||||||| |||||||||||||||||||| | |||| || ||||||||    
T  7244654 atttctatatcaaaagataaaagaaagtcaaactgttttcataa--gctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcat 7244751  T
Q  133 aagttgttt 141  Q
    || ||||||    
T  7244752 aaattgttt 7244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 12234937 - 12234808
Alignment:
Q  84 tcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttat 182  Q
    |||| ||||| ||||| |||||||||||||| ||||||  |||||||||||||||||||   ||   | | |||| |||||||| | ||||| |||  |     
T  12234937 tcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagctattccaagcagtctcacacgtgctaatgccag 12234838  T
Q  183 cagataagctcaagtaagtcaatccaaata 212  Q
     |||||||||||| ||||||||||||||||    
T  12234837 tagataagctcaactaagtcaatccaaata 12234808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 5288173 - 5288245
Alignment:
Q  124 acatgtcataagttgttttcttaga-ttctcccaaacagtctcaaaagtgcttatgttatcagataagctcaa 195  Q
    ||||||||||||||||||| ||  | |||||||||||||||||| ||||||||||| ||  |||| |||||||    
T  5288173 acatgtcataagttgttttttttaagttctcccaaacagtctcataagtgcttatgctagtagattagctcaa 5288245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 8094369 - 8094445
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaag 200  Q
    |||||||||||| ||||||| || | |||| |||| ||||||| ||||||||||| ||  |||||||||||| ||||    
T  8094369 acatgtcataagctgttttcataaaatctctcaaatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 31341200 - 31341284
Alignment:
Q  126 atgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||| |||||||| | || | ||||||||||||||| ||||||| |||||  |  ||| |||||||| ||||||||||||||    
T  31341200 atgtcattagttgtttccataaactctcccaaacagtcttaaaagtgtttatgcaagtagaaaagctcaaataagtcaatccaaa 31341284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 39591585 - 39591541
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||    
T  39591585 atttctataacaaaagataaaataaagtcaaattgttttcatata 39591541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 15321786 - 15321707
Alignment:
Q  129 tcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatcca 208  Q
    ||||||||||||||| || | | ||| ||||| ||||||||||||||| || |  | |||||||||| ||||||||||||    
T  15321786 tcataagttgttttcataaactatccaaaacaatctcaaaagtgcttaagtcagtaaataagctcaaataagtcaatcca 15321707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 37064289 - 37064218
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcataa 134  Q
    |||||||||||||||| |||||| | ||||| |||||||||||| || |||| | ||||  |||||||||||    
T  37064289 aagttgttttcatataagctatcatagagagcttatgaaaataaacttaaaacaacttataacatgtcataa 37064218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 43250794 - 43250687
Alignment:
Q  38 tctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataag 135  Q
    |||| ||||||| |||||||||||| || |  ||||| |||| |||||  ||||||| ||||||| |||| ||||||| | |||||| ||||||||||||    
T  43250794 tctagaacaaaagataaaataaagttaattgtttttcgtataagctattttggagagcttatgaatataaactgaaaacaacttacgaacatgtcataag 43250695  T
Q  136 ttgttttc 143  Q
     |||||||    
T  43250694 ctgttttc 43250687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 22387903 - 22387817
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||| |||||||||||||| ||   ||||||||||||||||| | ||| |||||| |  | ||||| || ||||||||||||||||    
T  22387903 acatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatgtcagtaaataagttctagtaagtcaatccaaa 22387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 24363668 - 24363521
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtc-ataagttgttttcttagattctcccaaaca 160  Q
    ||||||||||||||   |||||||||||||| ||||| |||||||||||||| | ||||  |||||||| |||  |||||| ||||    |||||||||     
T  24363668 aagttgttttcataa--gctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtcaataccttgtttccttaaggcctcccaaact 24363571  T
Q  161 gtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
     ||||| ||||||||||| ||  |||||| ||||| |||  |||||||||    
T  24363570 atctcataagtgcttatgctagtagataaactcaaataaaacaatccaaa 24363521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 29363603 - 29363657
Alignment:
Q  156 aaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||| ||||||||||||||  ||||||| |||| |||| |||||||||    
T  29363603 aaacagtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaa 29363657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 425858 - 425745
Alignment:
Q  98 tgaaaataagctgaaaatagcttacg-acatgtcataagttg-ttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaa 195  Q
    ||||||||||||| |||||||||| | |||||||||||| || ||||| ||  ||||||||||||||  || | |||||||||  |  |||||| |||||    
T  425858 tgaaaataagctggaaatagcttatgaacatgtcataagctgtttttcgtaagttctcccaaacagtgccacatgtgcttatgccagtagataatctcaa 425759  T
Q  196 gtaagtcaatccaa 209  Q
     |||| ||||||||    
T  425758 ataagccaatccaa 425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 209
Target Start/End: Original strand, 4001614 - 4001735
Alignment:
Q  89 gagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagat 187  Q
    ||||| || ||||||||||||||||| | ||||  | ||||||||||||||||| | || | |||||||||||  | || || |||||||||||  ||||    
T  4001614 gagagcttgtgaaaataagctgaaaaaaacttattggcatgtcataagttgtttccataaaatctcccaaacatacacacaaatgcttatgttagtagat 4001713  T
Q  188 aagctcaagtaagtcaatccaa 209  Q
    || ||||| || ||| ||||||    
T  4001714 aaactcaaatatgtcgatccaa 4001735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 1417216 - 1417260
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    |||| |||||||||| ||||||||||||||| |||||||||||||    
T  1417216 atttatataacaaaagataaaataaagtcaaattgttttcatata 1417260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 1418508 - 1418568
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    |||| ||||||| |||| |||||||||||  |  |||||||||||| ||||||||||||||    
T  1418508 tctcacaaacagcctcataagtgcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 6552343 - 6552303
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    ||||| || ||||||||||||||||||||||||| ||||||    
T  6552343 ctatcatgcagagtttatgaaaataagctgaaaacagctta 6552303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 11048060 - 11048108
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacg-acatgtcataagttgtttt 142  Q
    |||||| ||||||||||||| |||||| | |||||||||||||||||||    
T  11048060 ttatgagaataagctgaaaacagcttatgaacatgtcataagttgtttt 11048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 30456568 - 30456524
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||    
T  30456568 atttctaaaacaaaagataaaataaagtcaaattgttttcatata 30456524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 30496656 - 30496700
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||    
T  30496656 atttctataacaaaatataaaataaagtcaaattgttttcgtata 30496700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 30553374 - 30553446
Alignment:
Q  94 tttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctc 165  Q
    |||||||||||||| |||||| |||||| | ||||| |||||||| ||||||||  || ||||||| ||||||    
T  30553374 tttatgaaaataaggtgaaaacagcttatgaacatgccataagtttttttcttaagttttcccaaagagtctc 30553446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 35536059 - 35536103
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    |||||||||||| || ||||||||||||||| |||||||||||||    
T  35536059 atttctataacataagataaaataaagtcaaattgttttcatata 35536103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 45813298 - 45813254
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  45813298 atttctataccaaaagataaaataaagtcaacttgttttcatata 45813254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 27595616 - 27595520
Alignment:
Q  83 atcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||| ||||||||| | |||| |  ||||||||||||| || ||||||||||||||||| | || ||||||||||||||||||| |||||||||||    
T  27595616 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataaattctcccaaacagtctcataagtgcttatg 27595520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 281900 - 281769
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc-ttagattctcccaaacagtctcaaaagtgcttat 177  Q
    |||||||| ||||| | ||| |||||||||||||| | ||||  |||||||||||||||| || | ||||  ||||||||||||||||| |||| |||||    
T  281900 gctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattag-ctctcccaaacagtctcacaagtacttat 281802  T
Q  178 gttatcagataagctcaagtaagtcaatccaaa 210  Q
    || |  | |||| ||||||||||||||||||||    
T  281801 gtcactacataatctcaagtaagtcaatccaaa 281769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 7148684 - 7148815
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||| ||||||||| ||||||||||||| |||||||||||||  |||| |||||||||||||| | ||   ||| |  |||| ||||| |||||||||||    
T  7148684 gctaccctggagagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaagtgcttatg 7148783  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
      |  |||||||||||| |||||||| |||||    
T  7148784 cgactagataagctcaaataagtcaaaccaaa 7148815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 32578060 - 32577974
Alignment:
Q  58 aagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagct-tacgacatgtcataagttgttttc 143  Q
    ||||||| ||||| ||||||| ||||||||| ||||  |||| |||||||||||||| ||||  | |||||||||||||||||||||    
T  32578060 aagtcaaattgttctcatataagctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttc 32577974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 35070510 - 35070388
Alignment:
Q  89 gagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagat 187  Q
    ||||| ||||||||||||| |||||| |||||| || | || | |||| ||||||| |   ||||||||||||||| || ||||||||||||||  ||||    
T  35070510 gagagcttatgaaaataagttgaaaacagcttatgatcttgccttaagctgttttcatttgttctcccaaacagtcccacaagtgcttatgttagtagat 35070411  T
Q  188 aagctcaagtaagtcaatccaaa 210  Q
    |||||||| ||||  ||||||||    
T  35070410 aagctcaaataagaaaatccaaa 35070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 20368247 - 20368147
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacag 161  Q
    ||||||||||||||   ||| || ||||||  ||||||||||||| ||||| ||||||| || ||||||||||||||||||| ||  |||||||||| ||    
T  20368247 aagttgttttcataa--gctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaatag 20368150  T
Q  162 tct 164  Q
    |||    
T  20368149 tct 20368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 32171433 - 32171335
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaatagctt-acgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    ||||||||| || ||||| ||||||||||||||||||||   ||| ||||||||| ||||||| ||   |||| |||||||||||  ||||||||||||    
T  32171433 tatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcgcaagtgcttatgt 32171335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 34403883 - 34403972
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||| ||||| ||||||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||| | ||||| |||||    
T  34403883 agagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtctaacaagtgtttatg 34403972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 2205686 - 2205605
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatag 117  Q
    ||||||| ||||||| |||||| |||||||| |||||||||||   |||||| ||||||| ||||| |||||||||||| ||||    
T  2205686 atttctaaaacaaaagataaaacaaagtcaaattgttttcataa--gctatcttggagagcttatggaaataagctgaatatag 2205605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 2460196 - 2460072
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcag 185  Q
    ||||||| ||||| ||||||| |||||| | ||||  ||||||||||||||||||| | ||   |||| |||||||||||| |||| |||||| ||        
T  2460196 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagttt 2460097  T
Q  186 ataagctcaagtaagtcaatccaaa 210  Q
    |||||||||| ||||| ||||||||    
T  2460096 ataagctcaaataagttaatccaaa 2460072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 13908481 - 13908537
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataag 135  Q
    |||||| || |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13908481 gctatcatgaagagcttatgaaaataagctgaaaacagcttacgaacatgtcataag 13908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 27693488 - 27693392
Alignment:
Q  83 atcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    ||||| ||||||||| | |||| |  ||||||||||||| || ||||||||||||||||| | || |||||| |||| ||||||| |||| ||||||    
T  27693488 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataaattctctcaaatagtctcacaagtacttatg 27693392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 281962 - 281916
Alignment:
Q  39 ctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  281962 ctataacaaaagataaaataaagtcaacttgttttcatataagctat 281916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 725697 - 725643
Alignment:
Q  90 agagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||| ||||| |||||||||||||||||  |||| ||||||||||||||||||||    
T  725697 agagcttatggaaataagctgaaaatagtctacggacatgtcataagttgttttc 725643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 4006717 - 4006796
Alignment:
Q  63 aagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc 143  Q
    ||||||||||||||   |||||||  ||||| |||||||||||||||||||||| ||||  ||||| || ||||||||||||    
T  4006717 aagttgttttcataa--gctatccctgagaggttatgaaaataagctgaaaataacttatggacatatcgtaagttgttttc 4006796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 4420661 - 4420723
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttt 141  Q
    |||||| ||||||| ||||| |||||||||||||| |||||| | ||||||||||| ||||||    
T  4420661 gctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 29274347 - 29274297
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||| |||||    
T  29274347 atttctatagcaaaagataaaataaagtcaaattgttttcatataagctat 29274297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34939531 - 34939593
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttt 141  Q
    ||||||||| |||| ||||| |||||||||||||| | ||||| ||| |||||||||||||||    
T  34939531 gctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgttt 34939593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 34939762 - 34939796
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||||||||||| ||||||||||||||    
T  34939762 gctatcctggagagtttatggaaataagctgaaaa 34939796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 848019 - 848137
Alignment:
Q  92 agtttatgaaaataagctgaaaatagcttacg--acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataa 189  Q
    ||||||||||||||||||||||| |||||| |  | ||||||||||  |||||  ||  |||| ||||||||||||| ||   |||||| ||| ||||||    
T  848019 agtttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaa-aacttatgctat-agataa 848116  T
Q  190 gctcaagtaagtcaatccaaa 210  Q
    |||||| |||| |||||||||    
T  848117 gctcaaataaggcaatccaaa 848137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 10616586 - 10616462
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcag 185  Q
    ||||||| |||| ||||||||||||| | | |||||| |||||||||||||||||| | ||   ||||||||| ||| ||| || ||||||| | | |||    
T  10616586 tggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaatagt-tcacaaatgcttatatcaacag 10616488  T
Q  186 ataagctcaagtaagtcaatccaaat 211  Q
    ||| ||| ||| ||| ||||||||||    
T  10616487 atatgcttaagcaagccaatccaaat 10616462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 12230379 - 12230416
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatag 117  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  12230379 gctatcatggagagcttatgaaaataagctgaaaatag 12230416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 31624291 - 31624419
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacag--tctcaaaagtgcttatgttatcagataagc 191  Q
    ||||||||||||  | |||||| |||| | ||||||||| || ||||||| || ||||| ||||||||  ||||||||  |||||||| |  | ||||||    
T  31624291 ttatgaaaataacattaaaataacttatggacatgtcatgagctgttttcataaattctaccaaacagtctctcaaaacagcttatgtcagtatataagc 31624390  T
Q  192 tcaagtaagtcaatccaaatataccttaa 220  Q
    |||| |||| ||||||||| | |||||||    
T  31624391 tcaaataagccaatccaaacagaccttaa 31624419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 31776392 - 31776355
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaagttgtttt 72  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  31776392 atttctataacacaaataaaataaagtcaaattgtttt 31776355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 32513777 - 32513806
Alignment:
Q  35 atttctataacaaaaataaaataaagtcaa 64  Q
    ||||||||||||||||||||||||||||||    
T  32513777 atttctataacaaaaataaaataaagtcaa 32513806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 33116647 - 33116696
Alignment:
Q  124 acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgc 173  Q
    |||||||||||||||||||| || |||| | |||||||||||| ||||||    
T  33116647 acatgtcataagttgttttcataaattccctcaaacagtctcacaagtgc 33116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 8035154 - 8035114
Alignment:
Q  125 catgtcataagttgttttcttagattctcccaaacagtctc 165  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  8035154 catgtcataagttgttttcttaagttctcccaaatagtctc 8035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 12111074 - 12111118
Alignment:
Q  168 aagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||| ||  |||||||||||| ||||||||||||||||    
T  12111074 aagtgcttatgctagtagataagctcaaataagtcaatccaaata 12111118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24836317 - 24836273
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||    
T  24836317 atttctataacaaaagataaaataaagtcaaattgttttcgtata 24836273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 29940749 - 29940789
Alignment:
Q  36 tttctataacaaaa-ataaaataaagtcaagttgttttcat 75  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  29940749 tttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 31624108 - 31624172
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    |||||| ||||||  ||||||||||||| |||||| |||||| | |||||||||||| |||||||    
T  31624108 gctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttc 31624172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 32386613 - 32386581
Alignment:
Q  82 tatcctggagagtttatgaaaataagctgaaaa 114  Q
    |||||||||||| ||||||||||||||||||||    
T  32386613 tatcctggagagcttatgaaaataagctgaaaa 32386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 36200086 - 36200244
Alignment:
Q  50 ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttaga 148  Q
    |||||||||| |||  |||||||| |||| ||||||||| |||| | ||| |||||||||||||| | ||||  ||||||||||||||||||| |  | |    
T  36200086 ataaaataaactca--ttgttttcttataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgtttacaaaaa 36200183  T
Q  149 ttctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaa 209  Q
     |||| | |||| ||||| |||||||  | | || |||||||||||| |||||||||||||    
T  36200184 ctctctccaacattctcacaagtgctgttttcattagataagctcaaataagtcaatccaa 36200244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 44284176 - 44284091
Alignment:
Q  35 atttctataacaaaaa-taaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    |||||||||||||||| ||||| ||||||||  ||||||||||   |||||||||||||| ||||  |||||||||||||||||||||    
T  44284176 atttctataacaaaaaataaaacaaagtcaaactgttttcataa--gctatcctggagagcttatagaaataagctgaaaatagctta 44284091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 11253519 - 11253650
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttac-gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||||| ||||| ||| | ||||| |||||||| || |||  || |||||||||||||||||  || ||||| ||||||||||||  |||||||||||    
T  11253519 gctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagtctctcaagtgcttatg 11253618  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
     ||  |||||| ||||| ||||||||| ||||    
T  11253619 ctagtagataatctcaaataagtcaattcaaa 11253650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 30923949 - 30923820
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    ||||||| ||||||||||  |||||||||||||| ||||||  ||||||||||||| ||||| | |||  ||||  ||||||||||| ||||| |||| |    
T  30923949 ctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccatag-ctctcataaacagtctcacaagtgtttatat 30923851  T
Q  180 tatcagataagctcaagtaagtcaatccaaa 210  Q
     |  | ||||||||||||||| |||||||||    
T  30923850 caataaataagctcaagtaaggcaatccaaa 30923820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 3044314 - 3044249
Alignment:
Q  77 tatgctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttt 141  Q
    ||||||| ||||||||| ||||||||||||| |||||| |||||| | ||||||||||||||||||    
T  3044314 tatgctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgttt 3044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 22667422 - 22667554
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    |||||| ||||||| ||| | ||||||||| |||||| |||  || |||| ||| | ||||| | || | |||| |||||||||||| ||||||||||||    
T  22667422 gctatcttggagagcttacggaaataagctaaaaataacttctgaaatgttatatgctgtttccataaactctctcaaacagtctcacaagtgcttatgt 22667521  T
Q  180 tatcagataagctcaagtaagtcaatccaaata 212  Q
     |  |||||||||||| |||| ||||| |||||    
T  22667522 cagtagataagctcaaataagccaatcgaaata 22667554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 22724061 - 22724193
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgt 179  Q
    |||||| ||||||| ||| | ||||||||| |||||| |||  || |||| ||| | ||||| | || | |||| |||||||||||| ||||||||||||    
T  22724061 gctatcttggagagcttacggaaataagctaaaaataacttctgaaatgttatatgctgtttccataaactctctcaaacagtctcacaagtgcttatgt 22724160  T
Q  180 tatcagataagctcaagtaagtcaatccaaata 212  Q
     |  |||||||||||| |||| ||||| |||||    
T  22724161 cagtagataagctcaaataagccaatcgaaata 22724193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 49587034 - 49586954
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| |||||| ||||||| |||   |||||| |||||||    
T  49587034 atttctataacaaaagataaaataaagtcaaactgttttcatataagctatcttggagagattaaagaaataaactgaaaa 49586954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 30573966 - 30573836
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||| | ||||| |||||||||||| |||||| | ||||| ||||| |||||||| ||  ||||| ||||||  |||| |||||||||||    
T  30573966 gctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctcacaaacaaactcacaagtgcttatg 30573867  T
Q  179 ttatcagataagctcaagtaagtcaatccaaa 210  Q
    | |  |||| ||||||| |||||| |||||||    
T  30573866 tcagtagat-agctcaaataagtccatccaaa 30573836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 50211805 - 50211884
Alignment:
Q  131 ataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||||| ||  ||||| |||||||||| | ||||||||||||||  ||||||||| || ||||| ||||||||    
T  50211805 ataagttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 50211884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 21574515 - 21574597
Alignment:
Q  87 tggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaa 168  Q
    ||||||| ||||| ||||||||| |||  |||||| || ||||||||||||||||||| ||   |||||||||||||||||||    
T  21574515 tggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtctcaaa 21574597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 1395701 - 1395790
Alignment:
Q  123 gacatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    |||||||| |||||||||||  ||   |||| |||||||||||  ||||||||| || || |||||||||||| ||||||||| ||||||    
T  1395701 gacatgtcttaagttgtttttgtaagctctctcaaacagtctcgcaagtgcttacgtcataagataagctcaaataagtcaatacaaata 1395790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 31403447 - 31403516
Alignment:
Q  149 ttctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaatatacctt 218  Q
    |||||||||| |||||   |||| |||||||||  ||||||||||||||||||||||| ||||| |||||    
T  31403447 ttctcccaaatagtcttgcaagtacttatgttagtagataagctcaagtaagtcaatctaaatagacctt 31403516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 36101587 - 36101652
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttctt 145  Q
    |||||||| |||| |||||||||||||||||||| |||||  | |||||||||||| |||||||||    
T  36101587 ctatcctgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttctt 36101652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 48528530 - 48528608
Alignment:
Q  35 atttctataacaa-aaataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||||||||||| ||||||||||||  |||| ||||||||||   ||||| |||||||||||||  ||||||||||||||    
T  48528530 atttctataacaagaaataaaataaaaccaagctgttttcataa--gctattctggagagtttatagaaataagctgaaaa 48528608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 45541604 - 45541720
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctc 193  Q
    |||||| ||||| ||||||| |||||| || ||||||||||| ||||||| ||  |||| | ||||||||| | ||||| ||||   || | ||||||||    
T  45541604 ttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctc 45541703  T
Q  194 aagtaagtcaatccaaa 210  Q
    || ||||||||||||||    
T  45541704 aaataagtcaatccaaa 45541720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 37273152 - 37273251
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttatg 178  Q
    |||||| ||||||  ||||| ||||||| |||||| | |||| | |||||||||||||||||| | ||   |||||||||||||||||  ||||||||||    
T  37273152 gctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatg 37273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 38318991 - 38319042
Alignment:
Q  93 gtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttc 143  Q
    ||||||| ||||||||||||||||||||| | |||||| |||||||||||||    
T  38318991 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttttc 38319042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 41028969 - 41028882
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctatcctggagagtttatgaaaataagctgaaaatagctta 121  Q
    ||||||||||||||| | |||||||||||||  |||||||| ||| ||||| ||| || | || |||||||||| ||||||| |||||    
T  41028969 atttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctattctgtagggcttgtgaaaataagttgaaaattgctta 41028882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 1395623 - 1395673
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  1395623 atttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 25925764 - 25925818
Alignment:
Q  84 tcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagtt 137  Q
    |||||||||| ||||||||||||| |||||| |||||| | ||||||||||||||    
T  25925764 tcctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 25925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 38462233 - 38462283
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatatgctat 84  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||||||    
T  38462233 atttctataccaaaagataaaataaagtcaaactgttttcatatatgctat 38462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 2152229 - 2152132
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacga-catgtcataagttgttttcttagattctcccaaacagtctcaaaagtgcttat 177  Q
    ||||||| ||||| ||||  ||| ||| |||||| ||||||||| ||||||||||||||||||| || | | || |||  ||||||| ||||||||||    
T  2152229 ctatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataaaatatctcaattagtctcacaagtgcttat 2152132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 21872272 - 21872211
Alignment:
Q  154 ccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaatatac 215  Q
    ||||||||||||| |||||||||||| |  ||||||| |||| ||||| |||||||| ||||    
T  21872272 ccaaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaacatac 21872211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 24887335 - 24887274
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagcttacgacatgtcataagttgttt 141  Q
    |||||||||||||| |||||  ||||||||||||| || | | |||||||||||| ||||||    
T  24887335 gctatcctggagagcttatgggaataagctgaaaacagttaatgacatgtcataaattgttt 24887274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 26990686 - 26990731
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatatat 79  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||    
T  26990686 atttctataacaaaagataaaataaagtcaaattcttttcatatat 26990731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 34414835 - 34414802
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaa 114  Q
    ||||| ||||||||||||||||||||||||||||    
T  34414835 ctatcatggagagtttatgaaaataagctgaaaa 34414802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 36139897 - 36139962
Alignment:
Q  81 ctatcctggagagtttatgaaaataagctgaaaatagcttacg-acatgtcataagttgttttctt 145  Q
    ||||| || |||| |||||||||||||||||||| |||||  | |||||||||||| |||||||||    
T  36139897 ctatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttctt 36139962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 905088 - 905044
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||    
T  905088 atttctataacaaaagataaaataaagtcaatttgtttgcatata 905044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 10101594 - 10101550
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| |||||||||||| || |||||||||||||    
T  10101594 atttctataacaaaagataaaataaagttaaattgttttcatata 10101550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 10212519 - 10212475
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| |||||||||||| || |||||||||||||    
T  10212519 atttctataacaaaagataaaataaagttaaattgttttcatata 10212475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 15304465 - 15304421
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    ||||||||||||||| |||||||||||| || |||||||||||||    
T  15304465 atttctataacaaaagataaaataaagttaaattgttttcatata 15304421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 20880509 - 20880580
Alignment:
Q  95 ttatgaaaataagctgaaaatagcttacgaca--tgtcataagttgttttcttagattctcccaaacagtct 164  Q
    ||||||||||||||| |||| |||||| || |  ||||||||| ||||||| ||| |||||||||| |||||    
T  20880509 ttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcccaaatagtct 20880580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 27290953 - 27290889
Alignment:
Q  80 gctatcctggagagtttatgaaaataagctgaaaatagctta-cgacatgtcataagttgttttc 143  Q
    ||||||||| |||||| ||| |||||||||||||| ||||||  | ||||||||||| |||||||    
T  27290953 gctatcctgcagagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttc 27290889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 27294435 - 27294499
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaatata 214  Q
    |||| |||||||||||| |||||||||||  |  |||||| |||||||||| |||| ||||||||    
T  27294435 tctctcaaacagtctcacaagtgcttatgacaatagataaactcaagtaagccaattcaaatata 27294499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 34954035 - 34954079
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    |||||||||||| || |||||||||||||||| ||||||||||||    
T  34954035 atttctataacacaagataaaataaagtcaagctgttttcatata 34954079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 41057242 - 41057306
Alignment:
Q  148 attctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    ||||||||||||||||||| |||||||||||     |||||||||||| |||| |||| ||||||    
T  41057242 attctcccaaacagtctcacaagtgcttatgcatgtagataagctcaaataagccaattcaaata 41057306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 45590740 - 45590800
Alignment:
Q  150 tctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaa 210  Q
    ||||||||||||||||| ||||||||||| ||  ||||||| ||||  |||||||| ||||    
T  45590740 tctcccaaacagtctcacaagtgcttatgctagtagataagttcaaaaaagtcaattcaaa 45590800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 9777 - 9697
Alignment:
Q  132 taagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaata 212  Q
    |||||||||| | |||  ||||||||||||||||| ||||  ||||||||  |||||| ||||| ||| |||||| |||||    
T  9777 taagttgtttccataggctctcccaaacagtctcacaagtatttatgttagtagataaactcaaataaatcaatctaaata 9697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 27528 - 27572
Alignment:
Q  35 atttctataacaaaa-ataaaataaagtcaagttgttttcatata 78  Q
    |||||||||||| || ||||||||||||||| |||||||||||||    
T  27528 atttctataacagaagataaaataaagtcaaattgttttcatata 27572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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