View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20156_low_8 (Length: 266)
Name: NF20156_low_8
Description: NF20156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20156_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 37 - 247
Target Start/End: Original strand, 14347563 - 14347773
Alignment:
| Q |
37 |
agaaaacacgaacataattcatatggttgtagacgaacatgttctaatgcatgcacgagcatgtgaaatatttataacatgaattcatttagaaaatgtg |
136 |
Q |
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| T |
14347563 |
agaaaacacaaacataattcatatggttgtagacgaacatgttctaatgcatgcacgagcatgtgaaatatttataacatgaattcatttagaaaatgtg |
14347662 |
T |
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| Q |
137 |
aatagatgatgtcatatccatattaatcctaagatggcatgtacaaatgcatagacatatacttggcacttagatatttagcatgttaagcaattagaaa |
236 |
Q |
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| T |
14347663 |
aatagatgatgtcatatccatattaatcctaagatggcatgtacaaatgcatagacatatacttggcacttagatatttagcatgttaagcaattagaaa |
14347762 |
T |
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| Q |
237 |
catgtacgtga |
247 |
Q |
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| T |
14347763 |
catgtacgtga |
14347773 |
T |
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