View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20158_high_17 (Length: 250)

Name: NF20158_high_17
Description: NF20158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20158_high_17
NF20158_high_17
[»] chr8 (33 HSPs)
chr8 (9-69)||(5574599-5574658)
chr8 (9-73)||(20697549-20697612)
chr8 (9-72)||(43800812-43800874)
chr8 (12-73)||(53516-53576)
chr8 (25-70)||(4477677-4477722)
chr8 (9-74)||(14911757-14911821)
chr8 (9-66)||(22215111-22215167)
chr8 (10-74)||(40532050-40532112)
chr8 (25-72)||(2773641-2773688)
chr8 (2-73)||(35057337-35057407)
chr8 (12-74)||(284810-284871)
chr8 (12-74)||(631006-631067)
chr8 (12-74)||(816818-816879)
chr8 (9-71)||(25099408-25099469)
chr8 (9-71)||(39733721-39733782)
chr8 (12-74)||(42353736-42353797)
chr8 (25-71)||(43150247-43150293)
chr8 (25-70)||(18146338-18146383)
chr8 (25-69)||(12208803-12208847)
chr8 (25-69)||(12453231-12453275)
chr8 (25-72)||(35253088-35253135)
chr8 (27-70)||(45237853-45237896)
chr8 (28-70)||(40529497-40529539)
chr8 (28-69)||(25100276-25100317)
chr8 (25-66)||(31642807-31642848)
chr8 (25-74)||(39104236-39104285)
chr8 (25-62)||(41789233-41789270)
chr8 (25-66)||(45069877-45069918)
chr8 (10-66)||(3512471-3512526)
chr8 (13-73)||(4601017-4601076)
chr8 (10-74)||(5838248-5838311)
chr8 (12-64)||(17121817-17121868)
chr8 (2-70)||(21266900-21266967)
[»] chr3 (38 HSPs)
chr3 (2-66)||(52959292-52959355)
chr3 (2-75)||(19274721-19274793)
chr3 (9-72)||(12055558-12055620)
chr3 (9-70)||(52184870-52184930)
chr3 (2-73)||(17666795-17666865)
chr3 (9-70)||(8321474-8321534)
chr3 (9-74)||(30317987-30318051)
chr3 (10-70)||(36660180-36660239)
chr3 (25-69)||(41888806-41888850)
chr3 (9-69)||(41991727-41991786)
chr3 (25-69)||(48747401-48747445)
chr3 (12-71)||(8879359-8879417)
chr3 (3-70)||(9558897-9558963)
chr3 (9-72)||(34436018-34436080)
chr3 (9-68)||(36237834-36237892)
chr3 (10-65)||(46114989-46115043)
chr3 (25-76)||(51980722-51980773)
chr3 (9-64)||(54463499-54463553)
chr3 (27-69)||(4070813-4070855)
chr3 (25-67)||(50938295-50938337)
chr3 (25-70)||(6586261-6586306)
chr3 (10-71)||(46668336-46668396)
chr3 (9-70)||(48050990-48051050)
chr3 (35-72)||(49918249-49918286)
chr3 (25-69)||(12122939-12122983)
chr3 (10-73)||(12764664-12764726)
chr3 (9-71)||(1361666-1361727)
chr3 (9-66)||(2557945-2558001)
chr3 (25-66)||(32111618-32111659)
chr3 (25-70)||(35405535-35405580)
chr3 (25-70)||(40374566-40374611)
chr3 (25-66)||(42167390-42167431)
chr3 (10-75)||(45356462-45356526)
chr3 (25-69)||(5505929-5505973)
chr3 (25-69)||(34785936-34785980)
chr3 (27-71)||(40980200-40980244)
chr3 (25-69)||(42877237-42877281)
chr3 (10-66)||(51760471-51760526)
[»] chr2 (33 HSPs)
chr2 (2-75)||(10361384-10361456)
chr2 (9-69)||(1876076-1876135)
chr2 (9-72)||(12160957-12161019)
chr2 (10-72)||(1086037-1086098)
chr2 (25-71)||(7183340-7183386)
chr2 (25-66)||(10247441-10247482)
chr2 (9-70)||(11018075-11018135)
chr2 (9-70)||(30523605-30523665)
chr2 (9-73)||(34245239-34245302)
chr2 (9-73)||(39241204-39241267)
chr2 (2-74)||(42097948-42098019)
chr2 (2-65)||(43568364-43568426)
chr2 (25-71)||(8341213-8341259)
chr2 (9-66)||(8875673-8875729)
chr2 (25-66)||(18239339-18239380)
chr2 (12-69)||(24520264-24520320)
chr2 (9-74)||(36936116-36936180)
chr2 (25-70)||(45376905-45376950)
chr2 (10-70)||(3147443-3147502)
chr2 (25-69)||(6432167-6432211)
chr2 (25-73)||(16496674-16496722)
chr2 (2-66)||(43496162-43496225)
chr2 (34-64)||(15265408-15265438)
chr2 (25-67)||(33178960-33179002)
chr2 (25-66)||(6322198-6322239)
chr2 (25-78)||(26340092-26340145)
chr2 (25-66)||(38928622-38928663)
chr2 (9-66)||(42519714-42519770)
chr2 (25-65)||(18109773-18109813)
chr2 (25-69)||(36600934-36600978)
chr2 (25-69)||(36602790-36602834)
chr2 (25-65)||(39532063-39532103)
chr2 (25-69)||(44526045-44526089)
[»] chr6 (19 HSPs)
chr6 (9-71)||(20645653-20645714)
chr6 (9-72)||(24119282-24119344)
chr6 (25-70)||(12130477-12130522)
chr6 (25-74)||(22707283-22707332)
chr6 (10-70)||(18801696-18801755)
chr6 (25-72)||(18368792-18368839)
chr6 (9-72)||(21778129-21778191)
chr6 (25-70)||(1789783-1789828)
chr6 (2-75)||(21459013-21459085)
chr6 (25-66)||(24159238-24159279)
chr6 (10-74)||(6834090-6834153)
chr6 (25-69)||(15508346-15508390)
chr6 (25-69)||(31603970-31604014)
chr6 (9-64)||(20992308-20992362)
chr6 (10-69)||(25023499-25023557)
chr6 (9-70)||(13756363-13756423)
chr6 (25-66)||(32562469-32562510)
chr6 (10-66)||(1290382-1290437)
chr6 (25-69)||(5090142-5090186)
[»] chr7 (46 HSPs)
chr7 (10-67)||(981336-981392)
chr7 (2-70)||(28235281-28235348)
chr7 (10-69)||(31969510-31969568)
chr7 (9-71)||(28494319-28494380)
chr7 (9-75)||(28958165-28958230)
chr7 (9-71)||(31031937-31031998)
chr7 (9-66)||(4060352-4060408)
chr7 (10-71)||(46349928-46349988)
chr7 (2-62)||(14792153-14792212)
chr7 (9-69)||(27826706-27826765)
chr7 (9-69)||(43156565-43156624)
chr7 (25-73)||(46350894-46350942)
chr7 (1-65)||(48935236-48935299)
chr7 (25-68)||(21920854-21920897)
chr7 (25-72)||(35670412-35670459)
chr7 (9-68)||(42329066-42329124)
chr7 (10-69)||(46534405-46534463)
chr7 (27-69)||(34307112-34307154)
chr7 (25-70)||(30582667-30582712)
chr7 (25-66)||(42826000-42826041)
chr7 (25-70)||(44570928-44570973)
chr7 (6-70)||(31226911-31226974)
chr7 (10-62)||(39870065-39870116)
chr7 (25-69)||(40061160-40061204)
chr7 (31-66)||(3117364-3117399)
chr7 (28-71)||(35747020-35747063)
chr7 (34-69)||(38224585-38224620)
chr7 (2-73)||(42997507-42997577)
chr7 (9-72)||(46672500-46672562)
chr7 (31-69)||(18804282-18804320)
chr7 (2-68)||(25696031-25696096)
chr7 (9-67)||(43337632-43337689)
chr7 (25-67)||(44104634-44104676)
chr7 (25-71)||(44818716-44818762)
chr7 (25-66)||(30999402-30999443)
chr7 (25-66)||(37658173-37658214)
chr7 (9-66)||(42265316-42265372)
chr7 (9-69)||(6243864-6243923)
chr7 (10-66)||(6476926-6476981)
chr7 (25-69)||(8932558-8932602)
chr7 (10-62)||(30523998-30524049)
chr7 (25-69)||(33979613-33979657)
chr7 (10-66)||(36121431-36121486)
chr7 (25-69)||(41406185-41406229)
chr7 (25-69)||(43468068-43468112)
chr7 (25-69)||(46536119-46536163)
[»] chr5 (31 HSPs)
chr5 (9-70)||(10815059-10815119)
chr5 (9-70)||(12280777-12280837)
chr5 (10-74)||(2891018-2891081)
chr5 (2-74)||(5050138-5050209)
chr5 (9-79)||(12939925-12939994)
chr5 (9-79)||(12953875-12953944)
chr5 (9-71)||(34589969-34590030)
chr5 (9-71)||(37530788-37530849)
chr5 (25-74)||(1923939-1923988)
chr5 (9-74)||(6789657-6789721)
chr5 (9-74)||(15498637-15498701)
chr5 (9-70)||(24171361-24171421)
chr5 (9-74)||(29525364-29525428)
chr5 (9-70)||(42422803-42422863)
chr5 (9-70)||(42709307-42709367)
chr5 (9-69)||(41734312-41734371)
chr5 (9-64)||(35638766-35638820)
chr5 (10-72)||(7157542-7157603)
chr5 (9-74)||(11784236-11784300)
chr5 (9-70)||(27813044-27813104)
chr5 (9-66)||(36761062-36761118)
chr5 (25-69)||(3078599-3078643)
chr5 (25-72)||(4559538-4559585)
chr5 (9-64)||(16218351-16218405)
chr5 (2-69)||(17645303-17645369)
chr5 (25-66)||(11575622-11575663)
chr5 (25-66)||(20768926-20768967)
chr5 (28-73)||(36959459-36959504)
chr5 (25-69)||(8520494-8520538)
chr5 (10-70)||(13359525-13359584)
chr5 (2-66)||(25881507-25881570)
[»] chr1 (34 HSPs)
chr1 (9-74)||(27747599-27747663)
chr1 (2-66)||(25365760-25365823)
chr1 (2-69)||(2459682-2459748)
chr1 (9-68)||(36739551-36739609)
chr1 (25-75)||(14390413-14390463)
chr1 (9-70)||(30358070-30358130)
chr1 (9-70)||(39325607-39325667)
chr1 (10-74)||(9223832-9223895)
chr1 (10-69)||(5698505-5698563)
chr1 (25-72)||(11332836-11332883)
chr1 (25-72)||(11490857-11490904)
chr1 (9-72)||(38815592-38815654)
chr1 (25-70)||(3796022-3796067)
chr1 (25-66)||(23259085-23259126)
chr1 (1-70)||(28314889-28314957)
chr1 (25-70)||(30899480-30899525)
chr1 (9-70)||(31657143-31657203)
chr1 (9-66)||(47326627-47326683)
chr1 (9-66)||(50586222-50586278)
chr1 (25-69)||(5698123-5698167)
chr1 (29-69)||(43847491-43847531)
chr1 (25-64)||(4361118-4361157)
chr1 (9-72)||(38624062-38624124)
chr1 (10-69)||(41865284-41865342)
chr1 (23-66)||(42159612-42159655)
chr1 (28-66)||(33076605-33076643)
chr1 (25-71)||(35179815-35179861)
chr1 (9-70)||(1190186-1190246)
chr1 (25-66)||(4640151-4640192)
chr1 (9-66)||(11823584-11823640)
chr1 (25-66)||(12014642-12014683)
chr1 (25-70)||(31496606-31496651)
chr1 (25-66)||(38058749-38058790)
chr1 (9-70)||(45900165-45900225)
[»] scaffold0330 (1 HSPs)
scaffold0330 (13-72)||(6985-7043)
[»] scaffold0115 (2 HSPs)
scaffold0115 (25-75)||(4140-4190)
scaffold0115 (25-75)||(11880-11930)
[»] chr4 (42 HSPs)
chr4 (9-71)||(19801906-19801967)
chr4 (9-70)||(33984084-33984144)
chr4 (9-70)||(44448443-44448503)
chr4 (10-70)||(202286-202345)
chr4 (9-69)||(6238185-6238244)
chr4 (2-70)||(28778552-28778619)
chr4 (9-73)||(39840238-39840301)
chr4 (9-69)||(53284004-53284063)
chr4 (25-72)||(7141180-7141227)
chr4 (25-72)||(19912667-19912714)
chr4 (25-72)||(24152670-24152717)
chr4 (9-72)||(45561359-45561420)
chr4 (2-67)||(37498202-37498266)
chr4 (12-69)||(49335237-49335293)
chr4 (12-72)||(2390316-2390375)
chr4 (25-69)||(14269881-14269925)
chr4 (25-73)||(30653349-30653397)
chr4 (9-65)||(37114477-37114532)
chr4 (25-69)||(43590531-43590575)
chr4 (9-69)||(55001787-55001846)
chr4 (25-69)||(55496095-55496139)
chr4 (9-72)||(2943695-2943756)
chr4 (12-71)||(44525984-44526042)
chr4 (26-69)||(45549650-45549693)
chr4 (10-69)||(49646022-49646080)
chr4 (25-72)||(53431624-53431671)
chr4 (35-73)||(318740-318778)
chr4 (34-68)||(6287835-6287869)
chr4 (9-66)||(19800925-19800982)
chr4 (10-72)||(25686980-25687041)
chr4 (9-67)||(43374594-43374651)
chr4 (2-68)||(54683595-54683660)
chr4 (25-70)||(20986270-20986315)
chr4 (25-74)||(27531822-27531871)
chr4 (25-66)||(28459612-28459653)
chr4 (25-66)||(30411310-30411351)
chr4 (28-69)||(36181431-36181472)
chr4 (2-66)||(40674747-40674811)
chr4 (27-72)||(55610657-55610702)
chr4 (35-75)||(30996710-30996750)
chr4 (28-72)||(40685777-40685821)
chr4 (25-69)||(50792474-50792518)
[»] scaffold0060 (1 HSPs)
scaffold0060 (9-74)||(57892-57956)
[»] scaffold0007 (1 HSPs)
scaffold0007 (2-66)||(157651-157714)
[»] scaffold1391 (1 HSPs)
scaffold1391 (10-74)||(1539-1602)
[»] scaffold0039 (1 HSPs)
scaffold0039 (25-68)||(76242-76285)
[»] scaffold0076 (1 HSPs)
scaffold0076 (25-71)||(14249-14295)


Alignment Details
Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 5574658 - 5574599
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5574658 gagcttataagttaattc-aacaaactataagctaacttttttgtgttaccaaacacagcc 5574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 20697549 - 20697612
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||||||||| |||| ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  20697549 gagcttataagctaat-ccaacaagctataagctaacttttttgtattaccaaacacagcctaaa 20697612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 43800812 - 43800874
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  43800812 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 43800874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 53516 - 53576
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||||||||||||| || || |||||||||| |||||||||||||| ||||||||||||||    
T  53516 cttataagttaattcaaa-aagctataagctagcttatttgtgttacaaaacacagcctaaa 53576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 4477677 - 4477722
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  4477677 tccaacaagctataagctaacttttttgtgttaccaaacacagcct 4477722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14911821 - 14911757
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||||||||||||||  || |||||||||| |||||||||||||||    
T  14911821 gagcttataagctaat-ccaacaaactataagctagattttttgtgttactaaacacagcctaaat 14911757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 22215167 - 22215111
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  22215167 gagcttataagctaat-ccaacaagctataagctaacttttttgtgttaccaaacaca 22215111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 40532112 - 40532050
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||||| | |||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  40532112 agcttataagttagt-ccaataaactataagctagctt-tttgtgttaccaaacacagcctaaat 40532050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 2773641 - 2773688
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  2773641 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 2773688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 35057337 - 35057407
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||| ||||||||||| |||| | ||||| |||||||||| ||||||| |||||||||||||| ||||||    
T  35057337 atccaacgagcttataagctaat-ctaacaagctataagctatcttatttatgttaccaaacacaacctaaa 35057407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 284871 - 284810
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| |||| ||||||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  284871 cttataagctaat-ccaacaagctataaactaacttttttgtgttaccaaacacagccaaaat 284810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 631006 - 631067
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| |||| ||||||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  631006 cttataagctaat-ccaacaagctataaactaacttttttgtgttaccaaacacagccaaaat 631067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 816818 - 816879
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| |||| ||||||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  816818 cttataagctaat-ccaacaagctataaactaacttttttgtgttaccaaacacagccaaaat 816879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 25099469 - 25099408
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| |||||||  ||||||||| ||| |||||||||||||||||||||||    
T  25099469 gagcttataagctaat-ccaacaagttataagctagcttttttgtgttaccaaacacagccta 25099408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 39733782 - 39733721
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| |||||||  ||||||||| ||| |||||||||||||||||||||||    
T  39733782 gagcttataagctaat-ccaacaaggtataagctagcttttttgtgttaccaaacacagccta 39733721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 42353736 - 42353797
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| |||| |||||||||||||| ||||||| ||||| |||||||||||| |||||||    
T  42353736 cttataagctaat-ccaacaaactataaactaacttttttgtattaccaaacacaacctaaat 42353797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 43150293 - 43150247
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||    
T  43150293 tccaacaagctataagctagcttttttgtgttaccaaacacagccta 43150247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 18146383 - 18146338
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||    
T  18146383 tccaacaagctataagctagcttttttgtgttaccaaacacagcct 18146338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 12208847 - 12208803
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||    
T  12208847 tccaacaagctataagctagcttttttgtgttaccaaacacagcc 12208803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 12453275 - 12453231
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||    
T  12453275 tccaacaagctataagctagcttttttgtgttaccaaacacagcc 12453231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 35253088 - 35253135
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  35253088 tccagcaaactataagctagcttgtttgtgttaccaaacacaacctaa 35253135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 45237853 - 45237896
Alignment:
Q  27 caacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||    
T  45237853 caacaagctataagctagcttttttgtgttaccaaacacagcct 45237896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 40529539 - 40529497
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||    
T  40529539 aacaagctataagctagcttttttgtgttaccaaacacagcct 40529497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 25100276 - 25100317
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||| |||||||||| ||| |||||||||||||||||||||    
T  25100276 aacaagctataagctagcttttttgtgttaccaaacacagcc 25100317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 31642807 - 31642848
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  31642807 tccaacaagctataagctagcttattcgtgttaccaaacaca 31642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 39104236 - 39104285
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||| ||||||||| |||  |||||||||||||||||| ||||||    
T  39104236 tccaacaaattataagctagctttcttgtgttaccaaacacagtctaaat 39104285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 41789233 - 41789270
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaa 62  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  41789233 tccaacaagttataagctaacttatttgtgttaccaaa 41789270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 45069877 - 45069918
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  45069877 tccaacaagctataagctagcttttttgtgttaccaaacaca 45069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 3512526 - 3512471
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||| |||| |||| || |||||||||| ||| ||||||||||||||||||    
T  3512526 agcttataagctaat-ccaagaagctataagctagcttttttgtgttaccaaacaca 3512471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 4601017 - 4601076
Alignment:
Q  13 ttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||||||| ||| || ||| ||||||||| ||||||||||||| |||||||| ||||||    
T  4601017 ttataagttagttc-aataaattataagctagcttatttgtgttatcaaacacaacctaaa 4601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 5838311 - 5838248
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||||| |||| ||||||| ||||||| || ||| ||||| ||||||||||||||| ||||    
T  5838311 agcttataagctaat-ccaacaagctataagttagcttttttgtattaccaaacacagccaaaat 5838248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 17121868 - 17121817
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaaca 64  Q
    ||||||||||||| ||||||| |||||| ||| ||| ||||||||||||||||    
T  17121868 cttataagttaat-ccaacaacctataaactagcttttttgtgttaccaaaca 17121817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 21266900 - 21266967
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||||| |||| |||| | ||||| || ||||||| ||||||| |||||||||||| |||||    
T  21266900 atccaatgagcttctaagctaat-ctaacaagctttaagctagcttatttatgttaccaaacatagcct 21266967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 52959355 - 52959292
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  52959355 atccaacgagcttataagttaat-ccaacaaactataagctagcttatttgtgttaccaaacaca 52959292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 19274793 - 19274721
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||| ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  19274793 atccaacgagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcctaaatg 19274721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12055558 - 12055620
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  12055558 gagcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacacagcctaa 12055620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 52184870 - 52184930
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||    
T  52184870 gagcttataagttaat-ctaacaagctataagctaacttttttgtgttaccaaacacagcct 52184930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 17666865 - 17666795
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||| |||||||||||||||| |||| || |||||||||| ||| |||| ||||||||||||||||||||    
T  17666865 atccaacgagcttataagttaat-ccaataagctataagctagcttttttgggttaccaaacacagcctaaa 17666795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8321474 - 8321534
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  8321474 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 8321534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 30317987 - 30318051
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| |||||||||||||||||| | | ||||||||||||||||||||| ||||    
T  30317987 gagcttataagctaat-ccaacaaactataagctagcatttttgtgttaccaaacacagccaaaat 30318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 36660180 - 36660239
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||| |||| |||||||||||||||||| ||| |||||||||||||||| |||||    
T  36660180 agcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacatagcct 36660239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 41888850 - 41888806
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  41888850 tccaacaaactataagctagcttattcgtgttaccaaacacagcc 41888806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 41991727 - 41991786
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  41991727 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 41991786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 48747445 - 48747401
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  48747445 tccaataaactataagctaacttttttgtgttaccaaacacagcc 48747401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 8879417 - 8879359
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    |||||||| |||| |||||||||||||||||| ||| |||||||||||||||| ||||||    
T  8879417 cttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacatagccta 8879359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 9558897 - 9558963
Alignment:
Q  3 tccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||| ||||||||||| |||| | ||||| |||||||||| ||||||| ||||||||||||||||||    
T  9558897 tccaacgagcttataagctaat-ctaacaagctataagctagcttatttatgttaccaaacacagcct 9558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 34436018 - 34436080
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||| |||||    
T  34436018 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacaccctaa 34436080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 36237892 - 36237834
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    |||||||||||||||| ||||||||||||||||||  || ||| ||||||||||||||||    
T  36237892 gagcttataagttaat-ccaacaaactataagctagtttttttatgttaccaaacacagc 36237834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 46115043 - 46114989
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacac 65  Q
    |||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||    
T  46115043 agcttataagctaat-ccaacaagctataagctagcttatttgtgttaccaaacac 46114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 51980773 - 51980722
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatgc 76  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||| |||||    
T  51980773 tccaacaagctataaactaacttttttgtgttaccaaacacagccttaatgc 51980722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 54463499 - 54463553
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaaca 64  Q
    ||||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||    
T  54463499 gagcttataagataat-ccaacaaactataagttaacttttttgtgttaccaaaca 54463553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 4070855 - 4070813
Alignment:
Q  27 caacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  4070855 caacaaactataaactagcttatttgtgttaccaaacacagcc 4070813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 50938295 - 50938337
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    |||||||| ||||||||||||||||| ||||||||||||||||    
T  50938295 tccaacaagctataagctaacttattcgtgttaccaaacacag 50938337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 6586306 - 6586261
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  6586306 tccaacaaactataaactaacttttttatgttaccaaacacagcct 6586261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 46668396 - 46668336
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||||| | ||||||| |||||||||| ||| ||| |||||||||||||||||||    
T  46668396 agcttataagttagt-ccaacaagctataagctagcttttttatgttaccaaacacagccta 46668336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 48051050 - 48050990
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||||||||| ||||||| |||||||||| ||| |||| |||| ||||||||||||    
T  48051050 gagcttataagttaat-ccaacaagctataagctagcttttttgggttaacaaacacagcct 48050990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 49918286 - 49918249
Alignment:
Q  35 tataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  49918286 tataagctaacttttttgtgttaccaaacacagcctaa 49918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 12122939 - 12122983
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||    
T  12122939 tccaacaagctataagctagcttttttgtgttaccaaacacagcc 12122983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 12764726 - 12764664
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||||||| |||| |||| || |||||| ||| ||| |||||||||||||||||||||||||    
T  12764726 agcttataagctaat-ccaaaaagctataaactagcttttttgtgttaccaaacacagcctaaa 12764664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 1361727 - 1361666
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| ||||||| |||||||||| | | |||||||||| ||||||||||||    
T  1361727 gagcttataagctaat-ccaacaagctataagctagcctttttgtgttacgaaacacagccta 1361666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 2557945 - 2558001
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||||||||| | ||||| ||||||| || ||| ||||||||||||||||||    
T  2557945 gagcttataagttaat-caaacaagctataagttagcttttttgtgttaccaaacaca 2558001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 32111618 - 32111659
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  32111618 tccaacaagctataagctagcttttttgtgttaccaaacaca 32111659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 35405580 - 35405535
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||||||||||| ||| ||||||||| |||| |||||||    
T  35405580 tccaacaaactataagctagcttttttgtgttatcaaatacagcct 35405535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 40374566 - 40374611
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| ||||||| || ||| ||||||||||||||||||||||    
T  40374566 tccaacaagctataagttagcttttttgtgttaccaaacacagcct 40374611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 42167390 - 42167431
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  42167390 tccaacaagctataagctagcttattcgtgttaccaaacaca 42167431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 45356462 - 45356526
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||||||| |||||| ||||| ||||||| || ||| ||  |||||||||||||||||||||||    
T  45356462 agcttataagctaattc-aacaagctataagttagcttcttgatgttaccaaacacagcctaaatg 45356526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 5505973 - 5505929
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||  ||||||||| ||| |||||||||||||||||||||    
T  5505973 tccaacaagttataagctagcttttttgtgttaccaaacacagcc 5505929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 34785936 - 34785980
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||| || |||||||||| ||||| |||||||||||||||||||    
T  34785936 tccaataagctataagctagcttatgtgtgttaccaaacacagcc 34785980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 40980200 - 40980244
Alignment:
Q  27 caacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    |||||||||||||||||  || |||||||||||||||||| ||||    
T  40980200 caacaaactataagctagtttttttgtgttaccaaacacaaccta 40980244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 42877281 - 42877237
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||| || |||||||||| |||||| ||||||||||||||||||    
T  42877281 tccaagaagctataagctagcttattcgtgttaccaaacacagcc 42877237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 51760526 - 51760471
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||| |||| ||| | ||||||||||| |||||||||| |||||||    
T  51760526 agcttataagttaat-ccaataaattgtaagctaacttttttgtgttactaaacaca 51760471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 10361456 - 10361384
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||||||||||||||| || | ||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  10361456 atccaatgagcttataagctagt-ccaacaagctataagctagcttttttgtgttaccaaacacagcctaaatg 10361384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 1876076 - 1876135
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  1876076 gagcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacacagcc 1876135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12160957 - 12161019
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  12160957 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 12161019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 1086098 - 1086037
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||||| ||  ||||| |||||||||| ||||||||||||||||||||||||||||    
T  1086098 agcttataagttagttt-aacaagctataagctagcttatttgtgttaccaaacacagcctaa 1086037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 7183340 - 7183386
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  7183340 tccaacaaactataagctagcttttttgtgttaccaaacacagccta 7183386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 10247441 - 10247482
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  10247441 tccaacaaactataagctaacttttttgtgttaccaaacaca 10247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 11018075 - 11018135
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  11018075 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 11018135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 30523665 - 30523605
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  30523665 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 30523605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 34245302 - 34245239
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||| |||||||||||||||||||||    
T  34245302 gagcttataagctaat-ccaacaagctataagctagcttttttatgttaccaaacacagcctaaa 34245239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 39241204 - 39241267
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||| |||||    
T  39241204 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagtctaaa 39241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 42097948 - 42098019
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||| |||||||||| |||| |||| || |||||||||| ||| ||||||||||||||||||||| ||||    
T  42097948 atccaataagcttataagctaat-ccaagaagctataagctagcttttttgtgttaccaaacacagccaaaat 42098019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 43568426 - 43568364
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacac 65  Q
    |||||| ||||||||||| |||| ||||||| ||||||| |||||| |||||||||||||||||    
T  43568426 atccaacgagcttataagctaat-ccaacaagctataagttaacttttttgtgttaccaaacac 43568364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 8341213 - 8341259
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||    
T  8341213 tccaacaagttataagctagcttatttgtgttaccaaacacagccta 8341259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 8875729 - 8875673
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| |||||||  ||||||||||||| ||||||||||||||||||    
T  8875729 gagcttataagctaat-ccaacaagttataagctaacttttttgtgttaccaaacaca 8875673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 18239380 - 18239339
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  18239380 tccaaaaaactataagctaacttttttgtgttaccaaacaca 18239339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 24520264 - 24520320
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||| ||||||| |||||||||| |||||| ||||||||||||||||||    
T  24520264 cttataagctaat-ccaacaagctataagctagcttattcgtgttaccaaacacagcc 24520320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 36936116 - 36936180
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||| ||||||||||||| ||||||||    
T  36936116 gagcttataagctaat-ccaacaagctataagctagcttttttttgttaccaaacactgcctaaat 36936180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 45376950 - 45376905
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||    
T  45376950 tccaacaagctataaactagcttatttgtgttaccaaacacagcct 45376905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 3147502 - 3147443
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||| |||| | |||||  ||||||||||||||||| ||||||||||||||||||    
T  3147502 agcttataagctaat-ctaacaagttataagctaacttatttatgttaccaaacacagcct 3147443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 6432211 - 6432167
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||    
T  6432211 tccaacaagctataagctagcttatttgtgttaccaaatacagcc 6432167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 16496674 - 16496722
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||||| |||||||||| ||| |||||||||||||||||| ||||||    
T  16496674 tccaacaagctataagctagcttttttgtgttaccaaacacatcctaaa 16496722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 43496225 - 43496162
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||| ||||||||||| |||| | ||||| |||||||||| ||||||| ||||||||||||||    
T  43496225 atccaacgagcttataagctaatgc-aacaagctataagctagcttatttatgttaccaaacaca 43496162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 15265408 - 15265438
Alignment:
Q  34 ctataagctaacttatttgtgttaccaaaca 64  Q
    |||||||||||||||||||||||||||||||    
T  15265408 ctataagctaacttatttgtgttaccaaaca 15265438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 33179002 - 33178960
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    |||||||| |||||||||| |||||| ||||||||||||||||    
T  33179002 tccaacaagctataagctagcttattcgtgttaccaaacacag 33178960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 6322198 - 6322239
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  6322198 tccaacaagctataagctagcttattcgtgttaccaaacaca 6322239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 26340092 - 26340145
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatgcaa 78  Q
    ||||||||  |||||| || ||| |||||||||||||||||||||| |||||||    
T  26340092 tccaacaagttataagttagcttttttgtgttaccaaacacagccttaatgcaa 26340145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 38928622 - 38928663
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||||||| ||||||  ||||||||||||||    
T  38928622 tccaacaaactataagctagcttattcatgttaccaaacaca 38928663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 42519770 - 42519714
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| | ||||| |||||||||| ||| ||||||||||||||||||    
T  42519770 gagcttataagctaatgc-aacaagctataagctagcttttttgtgttaccaaacaca 42519714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 18109773 - 18109813
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacac 65  Q
    |||||||| |||||||||| ||| |||||||||||||||||    
T  18109773 tccaacaagctataagctagcttttttgtgttaccaaacac 18109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 36600978 - 36600934
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| |||||| |||||| |||||||||||    
T  36600978 tccaacaagctataagctagcttattcgtgttatcaaacacagcc 36600934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 36602790 - 36602834
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| ||||||  |||||||||||||||||    
T  36602790 tccaacaagctataagctagcttattaatgttaccaaacacagcc 36602834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 39532103 - 39532063
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacac 65  Q
    |||||||| ||||||||||| || |||||||||||||||||    
T  39532103 tccaacaagctataagctaatttttttgtgttaccaaacac 39532063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 44526045 - 44526089
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| ||| |||||| ||||||| |||||||||||||||||    
T  44526045 tccaacaagctaaaagctagcttatttatgttaccaaacacagcc 44526089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 20645714 - 20645653
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  20645714 gagcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacacagccta 20645653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 24119282 - 24119344
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  24119282 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 24119344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 12130522 - 12130477
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  12130522 tccaacaagctataagctaacttttttgtgttaccaaacacagcct 12130477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 22707332 - 22707283
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  22707332 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaaat 22707283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 18801755 - 18801696
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||||| | ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  18801755 agcttataagttagt-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 18801696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 18368792 - 18368839
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  18368792 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 18368839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 21778129 - 21778191
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||||||||||| ||||||  |||||| ||| ||| ||||||||||||||||||||||||    
T  21778129 gagcttataagttaat-ccaacaggctataaactagcttttttgtgttaccaaacacagcctaa 21778191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 1789828 - 1789783
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||    
T  1789828 tccaacaagctataagctagcttttttgtgttaccaaacacagcct 1789783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 21459085 - 21459013
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||| ||||||||||| |||| | ||||| |||||||||| ||||| | |||||||||||||||||| ||||    
T  21459085 atccaacgagcttataagctaat-ctaacaagctataagctagcttatctatgttaccaaacacagccttaatg 21459013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 24159279 - 24159238
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  24159279 tccaacaaactataagctaccttattcgtgttaccaaacaca 24159238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 6834090 - 6834153
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||||| || ||| ||||||||||||| || ||||||| |||||||||||| |||||||||    
T  6834090 agcttataagctagttc-aacaaactataagatagcttatttatgttaccaaacagagcctaaat 6834153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 15508390 - 15508346
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||    
T  15508390 tccaacaagctataagctagcttattcgtgttaccaaacacagcc 15508346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 31603970 - 31604014
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||    
T  31603970 tccagcaaactataagctagcttatttgtgttatcaaacacagcc 31604014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 20992308 - 20992362
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaaca 64  Q
    ||||||||||| |||| |||||||||||||| ||| ||| ||||||||||||||||    
T  20992308 gagcttataagctaat-ccaacaaactataaactagcttttttgtgttaccaaaca 20992362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 25023499 - 25023557
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||| ||||    
T  25023499 agcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacaaagcc 25023557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 13756363 - 13756423
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||| ||| ||| || |||||||||||||||||||    
T  13756363 gagcttataagctaat-ccaacaagctataaactagctttttcgtgttaccaaacacagcct 13756423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 32562469 - 32562510
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  32562469 tccaacaagctataagctagcttattcgtgttaccaaacaca 32562510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 1290437 - 1290382
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||| || ||| ||||| |||||||||||||||||| | ||||||||||||    
T  1290437 agcttataagcta-ttctaacaagctataagctaacttatttattttaccaaacaca 1290382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 5090142 - 5090186
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||| || |||||||||| |||||| ||||||||||||||||||    
T  5090142 tccaagaagctataagctagcttattcgtgttaccaaacacagcc 5090186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 981392 - 981336
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  981392 agcttataagctaat-ccaacaaactataagctaacttttttgtgttaccaaacacag 981336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 28235348 - 28235281
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||| ||||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||||    
T  28235348 atccaacgagcttataagctaat-ccaacaaactataagctagcttatttatgttatcaaacacagcct 28235281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 31969510 - 31969568
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||| | ||||||| |||||||||||||| |||||||||||||||||||||    
T  31969510 agcttataagttagt-ccaacaatctataagctaacttttttgtgttaccaaacacagcc 31969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 28494319 - 28494380
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  28494319 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagccta 28494380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 28958165 - 28958230
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||| || |||||    
T  28958165 gagcttataagttaat-ccaacaagctataagctagcttttttgtgttaccaaacacaaccaaaatg 28958230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 31031937 - 31031998
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    |||||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||||||||||    
T  31031937 gagcttataagttaat-ccaacaagctataaactagcttttttgtgttaccaaacacagccta 31031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 4060408 - 4060352
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||    
T  4060408 gagcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacaca 4060352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 46349928 - 46349988
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||||||| |||| || |||||||||| ||| |||||||||||||||||||||||    
T  46349928 agcttataagttaat-ccaagaagctataagctagcttttttgtgttaccaaacacagccta 46349988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 14792153 - 14792212
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaa 62  Q
    |||||| ||||||||||| |||| | ||||| |||||||||||||||||||||||||||||    
T  14792153 atccaacgagcttataagctaat-ctaacaagctataagctaacttatttgtgttaccaaa 14792212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 27826765 - 27826706
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  27826765 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 27826706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 43156624 - 43156565
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  43156624 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 43156565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 46350894 - 46350942
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  46350894 tccaacaagctataagctaacttttttgtgttaccaaacacagtctaaa 46350942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48935299 - 48935236
Alignment:
Q  1 tatccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacac 65  Q
    ||||||| ||||||||||  |||| ||||||| |||||||||| |||||||||||||||||||||    
T  48935299 tatccaacgagcttataaactaat-ccaacaagctataagctagcttatttgtgttaccaaacac 48935236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 21920854 - 21920897
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  21920854 tccaacaagctataagctagcttatttgtgttaccaaacacagc 21920897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 35670412 - 35670459
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  35670412 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 35670459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 42329066 - 42329124
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||    
T  42329066 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagc 42329124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 46534463 - 46534405
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  46534463 agcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 46534405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 34307154 - 34307112
Alignment:
Q  27 caacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  34307154 caacaaactataaactaacttatttatgttaccaaacacagcc 34307112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 30582712 - 30582667
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||    
T  30582712 tccaacaagctataagctagcttttttgtgttaccaaacacagcct 30582667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 42826041 - 42826000
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  42826041 tccaacaagctataaactaacttatttgtgttaccaaacaca 42826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 44570973 - 44570928
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||    
T  44570973 tccaataagctataagctaacttttttgtgttaccaaacacagcct 44570928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 31226911 - 31226974
Alignment:
Q  6 aatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||||||  |||||| |||||  ||||||||||||| |||||||||||||||| |||||    
T  31226911 aatgagcttataaactaattc-aacaagttataagctaacttttttgtgttaccaaacagagcct 31226974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 39870065 - 39870116
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaa 62  Q
    |||||||||| |||| |||||||||||||||||| ||| ||||||||||||||    
T  39870065 agcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaa 39870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 40061204 - 40061160
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||    
T  40061204 tccaacaagctataagctagcttttttgtgttaccaaacacagcc 40061160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 3117364 - 3117399
Alignment:
Q  31 aaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3117364 aaactataagctaacttatttttgttaccaaacaca 3117399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 35747063 - 35747020
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||    
T  35747063 aacaagctataagctagcttttttgtgttaccaaacacagccta 35747020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 38224620 - 38224585
Alignment:
Q  34 ctataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||||| |||||||||||||||||||||||||    
T  38224620 ctataagctagcttatttgtgttaccaaacacagcc 38224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 42997577 - 42997507
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||| ||||||||||| || | ||||||||||||||  |||||| || ||||||| ||||||||||||||    
T  42997577 atccaacgagcttataagctagt-ccaacaaactataaagtaactttttagtgttactaaacacagcctaaa 42997507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 46672562 - 46672500
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| |||||||  ||||||||| ||| ||||||||| ||||||||||||||    
T  46672562 gagcttataagctaat-ccaacaagttataagctagcttttttgtgttatcaaacacagcctaa 46672500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 18804320 - 18804282
Alignment:
Q  31 aaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  18804320 aaactataagctaacttatttgtgttatcaaacagagcc 18804282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 25696096 - 25696031
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    |||||| ||||||||||| |||| | ||||| ||||||||||  |||||| ||||||||||||||||    
T  25696096 atccaacgagcttataagctaat-ctaacaagctataagctagtttatttatgttaccaaacacagc 25696031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 43337689 - 43337632
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||| |||||||||||||||    
T  43337689 gagcttataagctaat-ccaacaagctataagctagcttttttatgttaccaaacacag 43337632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 44104634 - 44104676
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||    
T  44104634 tccaacaaactataagctagcttttttttgttaccaaacacag 44104676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 44818762 - 44818716
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  44818762 tccaacaaattataagctagcttttttatgttaccaaacacagccta 44818716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 30999402 - 30999443
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||| || |||||| ||||||||||||||||||||||||||    
T  30999402 tccaataagctataaactaacttatttgtgttaccaaacaca 30999443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 37658173 - 37658214
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  37658173 tccaacaagctataagctagcttttttgtgttaccaaacaca 37658214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 42265316 - 42265372
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||| |||||||||||||    
T  42265316 gagcttataagctaat-ccaacaagctataagctagcttttttgagttaccaaacaca 42265372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 6243923 - 6243864
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||| ||| |||  ||||||||||||||||||||    
T  6243923 gagcttataagctaat-ccaacaagctataaactagctttgttgtgttaccaaacacagcc 6243864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 6476981 - 6476926
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||| |||| |||| || |||||||||| ||| ||||||||||||||||||    
T  6476981 agcttataagctaat-ccaagaagctataagctagcttttttgtgttaccaaacaca 6476926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 8932558 - 8932602
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||    
T  8932558 tccaacaagttataaactaatttatttgtgttaccaaacacagcc 8932602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 30523998 - 30524049
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaa 62  Q
    ||||||| ||||||| ||||||| |||||||||| ||||||||||| ||||||    
T  30523998 agcttatgagttaat-ccaacaagctataagctagcttatttgtgtcaccaaa 30524049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 33979657 - 33979613
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||    
T  33979657 tccaacaagctataagctagcttattcgtgttaccaaacgcagcc 33979613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 36121486 - 36121431
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||| |||| |||| || |||||||||| ||| ||||||||||||||||||    
T  36121486 agcttataagctaat-ccaataagctataagctatcttctttgtgttaccaaacaca 36121431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 41406229 - 41406185
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||| || |||||||||| |||||| ||||||||||||||||||    
T  41406229 tccaataagctataagctagcttattcgtgttaccaaacacagcc 41406185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 43468068 - 43468112
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||||||||| ||| |||  ||||||||||||||||    
T  43468068 tccaacaaactataagctagcttttttcggttaccaaacacagcc 43468112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 46536163 - 46536119
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| ||| |||||| ||| |||||||||||||||||||||    
T  46536163 tccaacaagctacaagctagcttttttgtgttaccaaacacagcc 46536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 10815119 - 10815059
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||    
T  10815119 gagcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacacagcct 10815059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 12280837 - 12280777
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||    
T  12280837 gagcttataagctaat-ccaacaaactataagctagcttttttgtgttaccaaacacagcct 12280777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 2891018 - 2891081
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  2891018 agcttataagttagt-ccaacaaactataagctagattatttgtgttaccaaacacaccctaaat 2891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 5050138 - 5050209
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||| ||||||||||| |||| ||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  5050138 atccaacgagcttataagctaat-ccaacaagctataagctagcttatttatgttaccaaacacagccaaaat 5050209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 12939925 - 12939994
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatgcaaa 79  Q
    ||||||||||| |||| |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||    
T  12939925 gagcttataagctaat-ccaacaaattataagctagcttttttgtgttaccaaatacagcctaaatacaaa 12939994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 12953875 - 12953944
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatgcaaa 79  Q
    ||||||||||| |||| |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||    
T  12953875 gagcttataagctaat-ccaacaaattataagctagcttttttgtgttaccaaatacagcctaaatacaaa 12953944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 34589969 - 34590030
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  34589969 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagccta 34590030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 37530788 - 37530849
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  37530788 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagccta 37530849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 1923988 - 1923939
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  1923988 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaaat 1923939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6789657 - 6789721
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  6789657 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcccaaat 6789721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 15498701 - 15498637
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  15498701 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcccaaat 15498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 24171421 - 24171361
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  24171421 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 24171361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 29525364 - 29525428
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  29525364 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagccaaaat 29525428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 42422863 - 42422803
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||||    
T  42422863 gagcttataagttaattc-aacaagctataaactagcttttttgtgttaccaaacacagcct 42422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 42709367 - 42709307
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  42709367 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 42709307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 41734312 - 41734371
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  41734312 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 41734371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 35638820 - 35638766
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaaca 64  Q
    |||||||||||||||| ||||||||||||||||||  || ||||||||||||||||    
T  35638820 gagcttataagttaat-ccaacaaactataagctagtttttttgtgttaccaaaca 35638766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 7157542 - 7157603
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||||| | ||||||| |||||||||| ||| ||||||||||||||||||| ||||    
T  7157542 agcttataagttagt-ccaacaagctataagctagcttttttgtgttaccaaacacagtctaa 7157603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 11784236 - 11784300
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||| ||||||||||||||| ||||||    
T  11784236 gagcttataagctaat-ccaacaagctataagctagcttttttatgttaccaaacacagtctaaat 11784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 27813044 - 27813104
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||  |||||| ||||| |||||||||| ||| ||||||||||||||||||||||    
T  27813044 gagcttataaactaattc-aacaagctataagctagcttttttgtgttaccaaacacagcct 27813104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 36761118 - 36761062
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||    
T  36761118 gagcttataagctaat-ccaacaacctataagctagcttttttgtgttaccaaacaca 36761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 3078599 - 3078643
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||    
T  3078599 tccaacaagttataagctaacttttttgtgttaccaaacacagcc 3078643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 4559538 - 4559585
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| ||| ||| ||||||||||||||||||||    
T  4559538 tccaacaagctataagctagcttttttatgttaccaaacacagcctaa 4559585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 16218351 - 16218405
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaaca 64  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||    
T  16218351 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaaca 16218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 17645369 - 17645303
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||| || |||||||| |||| | ||||| |||||||||| ||||||| |||||||||||||||||    
T  17645369 atccaacgaacttataagctaat-ctaacaagctataagctagcttatttatgttaccaaacacagcc 17645303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 11575663 - 11575622
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  11575663 tccaacaagctataagctagcttttttgtgttaccaaacaca 11575622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 20768926 - 20768967
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||| ||||||| |||||||| |||||||||    
T  20768926 tccaacaaactataaactaacttttttgtgttgccaaacaca 20768967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 36959504 - 36959459
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||| |||||||||| ||| |||||||||||||||||| ||||||    
T  36959504 aacaagctataagctagcttttttgtgttaccaaacacaacctaaa 36959459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 8520538 - 8520494
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||    
T  8520538 tccaacaagctataagttagcttattcgtgttaccaaacacagcc 8520494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 13359525 - 13359584
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||| |||| ||||||| ||||| |||| ||| ||||||||| ||||||||||||    
T  13359525 agcttataagctaat-ccaacaagctatatgctagcttttttgtgttatcaaacacagcct 13359584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 25881570 - 25881507
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||| ||||||||||| |||| | ||||| |||||||||| | ||||| ||||||||||||||    
T  25881570 atccaacgagcttataagctaat-ctaacaagctataagctagcctatttatgttaccaaacaca 25881507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 27747663 - 27747599
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  27747663 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcctaaat 27747599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 25365823 - 25365760
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||| |||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||    
T  25365823 atccaacgagcttataagttaat-ctaacaagctataagctaacttatttatgttaccaaacaca 25365760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 2459682 - 2459748
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||| |||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  2459682 atccaataagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 2459748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 36739609 - 36739551
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  36739609 gagcttataagttaat-ccaacaaactataaactaacttttttgtattaccaaacacagc 36739551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 14390463 - 14390413
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  14390463 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaaatg 14390413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 30358130 - 30358070
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  30358130 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 30358070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 39325667 - 39325607
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  39325667 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 39325607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 9223895 - 9223832
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||||| | ||||||| ||||||| || ||| ||||||||||||||||||||||||||    
T  9223895 agcttataagttagt-ccaacaagctataagttagcttttttgtgttaccaaacacagcctaaat 9223832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 5698563 - 5698505
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||| | ||||||| |||||||||| ||| |||||||||||||||||||||    
T  5698563 agcttataagttagt-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 5698505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 11332883 - 11332836
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  11332883 tccaacaaactataaactagcttttttgtgttaccaaacacagcctaa 11332836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 11490904 - 11490857
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  11490904 tccaacaaactataaactagcttttttgtgttaccaaacacagcctaa 11490857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 38815592 - 38815654
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||| |||||||||    
T  38815592 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaatacagcctaa 38815654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 3796022 - 3796067
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||    
T  3796022 tccaacaagctataagctagcttttttgtgttaccaaacacagcct 3796067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 23259126 - 23259085
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  23259126 tccaacaagctataagctaacttattcgtgttaccaaacaca 23259085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28314889 - 28314957
Alignment:
Q  1 tatccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||| ||||||||||||||||||| |||||||| ||||| |||  || |||| |||||||||||||||||    
T  28314889 tatctaatgagcttataagttaat-ccaacaaattataaactagtttttttgggttaccaaacacagcct 28314957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 30899480 - 30899525
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||    
T  30899480 tccaacaagctataagctagcttttttgtgttaccaaacacagcct 30899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 31657143 - 31657203
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| |||||||| ||||| ||| ||| ||||||||||||||||||||||    
T  31657143 gagcttataagctaat-ccaacaaattataaactagcttttttgtgttaccaaacacagcct 31657203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 47326627 - 47326683
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| |||||||||||||||||| ||| |||| |||||||||||||    
T  47326627 gagcttataagctaat-ccaacaaactataagctagcttttttgggttaccaaacaca 47326683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 50586222 - 50586278
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||    
T  50586222 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacaca 50586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 5698167 - 5698123
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||    
T  5698167 tccaacaagctataagctagcttttttgtgttaccaaacacagcc 5698123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 43847491 - 43847531
Alignment:
Q  29 acaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  43847491 acaaactataagctagcttattcgtgttaccaaacacagcc 43847531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 4361118 - 4361157
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaaca 64  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  4361118 tccaataaactataagctaacttttttgtgttaccaaaca 4361157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 38624124 - 38624062
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||||||||||| || ||| |||||| ||||||||| |||||||    
T  38624124 gagcttataagctaat-ccaacaaactataagttagcttttttgtgctaccaaacaaagcctaa 38624062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 41865342 - 41865284
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||||| |||| |||| || |||||||||| ||| |||||||||||||||||||||    
T  41865342 agcttataagctaat-ccaagaagctataagctagcttttttgtgttaccaaacacagcc 41865284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 42159655 - 42159612
Alignment:
Q  23 attccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||| |||||||||| |||||| |||||||||||||||    
T  42159655 attccaacaagctataagctagcttattcgtgttaccaaacaca 42159612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 33076643 - 33076605
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  33076643 aacaaactataagctagcttatttatgttaccaaacaca 33076605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 35179861 - 35179815
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    |||||||| |||||||||| ||| ||| |||||||||||||||||||    
T  35179861 tccaacaagctataagctagcttttttatgttaccaaacacagccta 35179815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 1190186 - 1190246
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| |||||||  ||||| ||| ||| ||||||||||||||||||||||    
T  1190186 gagcttataagctaat-ccaacaagttataaactagcttttttgtgttaccaaacacagcct 1190246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 4640151 - 4640192
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  4640151 tccaacaagctataagctagcttattcgtgttaccaaacaca 4640192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 11823640 - 11823584
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| ||||||| |||||| ||| ||| ||||||||||||||||||    
T  11823640 gagcttataagctaat-ccaacaagctataaactagcttttttgtgttaccaaacaca 11823584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 12014683 - 12014642
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||  ||||||||||||| ||||||||||||||||||    
T  12014683 tccaacaagttataagctaacttttttgtgttaccaaacaca 12014642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 31496651 - 31496606
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||| || |||||||||| ||||| ||||||||||||||||||||    
T  31496651 tccaagaagctataagctagcttatctgtgttaccaaacacagcct 31496606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 38058790 - 38058749
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  38058790 tccaacaagctataagctagcttttttgtgttaccaaacaca 38058749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 45900225 - 45900165
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||| ||||||| |||||| ||| ||| | ||||||||||||||||||||    
T  45900225 gagcttataagctaat-ccaacaagctataaactagcttttctgtgttaccaaacacagcct 45900165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 7043 - 6985
Alignment:
Q  13 ttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  7043 ttataagctaattc-aacaaactataagctagcttttttgtgttaccaaacacagcctaa 6985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 4190 - 4140
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  4190 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaaatg 4140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 11930 - 11880
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  11930 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaaatg 11880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 19801906 - 19801967
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  19801906 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagccta 19801967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 33984144 - 33984084
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||||| |||||| ||||| |||||||||| ||| ||||||||||||||||||||||    
T  33984144 gagcttataagctaattc-aacaagctataagctagcttttttgtgttaccaaacacagcct 33984084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 44448503 - 44448443
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||    
T  44448503 gagcttataagttaat-ccaacaagctataagttagcttttttgtgttaccaaacacagcct 44448443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 202345 - 202286
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  202345 agcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcct 202286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 6238244 - 6238185
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  6238244 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 6238185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 28778619 - 28778552
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    ||||||||| ||||||||||||| | ||||| |||||| ||| ||||||| ||||||||||||||||||    
T  28778619 atccaatgaacttataagttaat-ctaacaagctataaactagcttatttatgttaccaaacacagcct 28778552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 39840238 - 39840301
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||| ||||||    
T  39840238 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacaacctaaa 39840301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 53284063 - 53284004
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  53284063 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 53284004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 7141180 - 7141227
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  7141180 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 7141227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 19912714 - 19912667
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  19912714 tccaacaagctataagctagcttttttgtgttaccaaacacagcctaa 19912667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 24152717 - 24152670
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| |||||||||| |||||||||||||||||||||| |||||    
T  24152717 tccaacaagctataagctagcttatttgtgttaccaaacacaacctaa 24152670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 45561359 - 45561420
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  45561359 gagcttataagctaat-ccaacaagctataagctagctt-tttgtgttaccaaacacagcctaa 45561420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 37498266 - 37498202
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    |||||| ||||||||||| |||| ||||||||||||||| || | | |||||||||||||||||||    
T  37498266 atccaacgagcttataagctaat-ccaacaaactataagttagcctttttgtgttaccaaacacag 37498202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 49335237 - 49335293
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  49335237 cttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagcc 49335293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 2390316 - 2390375
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| | |||| || |||||||||| ||| ||||||||||||||||||||||||    
T  2390316 cttataagttagt-ccaagaagctataagctagcttttttgtgttaccaaacacagcctaa 2390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 14269881 - 14269925
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||    
T  14269881 tccaacaagctataagctagcttattcgtgttaccaaacacagcc 14269925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 30653349 - 30653397
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    |||||||| | |||||||||||| |||||||||||||||||| ||||||    
T  30653349 tccaacaagccataagctaacttttttgtgttaccaaacacaacctaaa 30653397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 37114477 - 37114532
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacac 65  Q
    ||||||||||| |||| ||||||| |||||||||| ||| |||||||||||||||||    
T  37114477 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacac 37114532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 43590575 - 43590531
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||    
T  43590575 tccaacaagctataagctagcttattcgtgttaccaaacacagcc 43590531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 55001787 - 55001846
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||| |||| ||||||| ||||||||||  || |||||||||||||||||||||    
T  55001787 gagcttataagctaat-ccaacaagctataagctagtttttttgtgttaccaaacacagcc 55001846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 55496095 - 55496139
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  55496095 tccaacaagctataagctaacttttttgtgttaccaaaaacagcc 55496139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 2943695 - 2943756
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||||||||| |||| ||||||||||||||||||  || |||||||||||||||||| |||||    
T  2943695 gagcttataagctaat-ccaacaaactataagctagttt-tttgtgttaccaaacacaacctaa 2943756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 44525984 - 44526042
Alignment:
Q  12 cttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    |||||||| |||| |||||||||||||||||| ||| |||  ||||||||||||||||||    
T  44525984 cttataagctaat-ccaacaaactataagctagcttttttaagttaccaaacacagccta 44526042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 45549693 - 45549650
Alignment:
Q  26 ccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||    
T  45549693 ccaacaagctataagctagcttttttgtgttaccaaacacagcc 45549650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 49646080 - 49646022
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||||| |||| ||||||  ||||||||||||||||| ||||||||||||| ||||    
T  49646080 agcttataagctaat-ccaacaggctataagctaacttattcgtgttaccaaacatagcc 49646022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 53431671 - 53431624
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||| ||||||||||  || ||||||||||||||||||||||||    
T  53431671 tccaacaagctataagctacattttttgtgttaccaaacacagcctaa 53431624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 318740 - 318778
Alignment:
Q  35 tataagctaacttatttgtgttaccaaacacagcctaaa 73  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  318740 tataagctagcttatttgtgttaccaaacacaacctaaa 318778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 6287869 - 6287835
Alignment:
Q  34 ctataagctaacttatttgtgttaccaaacacagc 68  Q
    |||||||||||||| ||||||||||||||||||||    
T  6287869 ctataagctaacttttttgtgttaccaaacacagc 6287835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 19800982 - 19800925
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaac-ttatttgtgttaccaaacaca 66  Q
    ||||||||||| |||| ||||||| |||||||||||| || ||||||||||||||||||    
T  19800982 gagcttataagctaat-ccaacaagctataagctaactttttttgtgttaccaaacaca 19800925  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 25687041 - 25686980
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||||||| |||| |||| |||||||||  || ||| ||||||||||||||||||||||||    
T  25687041 agcttataagctaat-ccaaaaaactataaattagcttttttgtgttaccaaacacagcctaa 25686980  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 43374651 - 43374594
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacag 67  Q
    ||||||||||| |||| ||||||| |||||||||| | | |||||||||||||||||||    
T  43374651 gagcttataagctaat-ccaacaagctataagctagcatttttgtgttaccaaacacag 43374594  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 54683660 - 54683595
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    |||||| ||||||||||| |||| | |||||  ||||||||| ||||||| ||||||||||||||||    
T  54683660 atccaacgagcttataagctaat-ctaacaagttataagctagcttatttatgttaccaaacacagc 54683595  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 20986315 - 20986270
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcct 70  Q
    |||||||| ||||||| || ||||||| ||||||||||||||||||    
T  20986315 tccaacaagctataagttagcttatttatgttaccaaacacagcct 20986270  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 27531871 - 27531822
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||| ||||||| || | ||||||||||||||||||||||| ||||    
T  27531871 tccaacaagctataagttagcctatttgtgttaccaaacacagccgaaat 27531822  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 28459653 - 28459612
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||||||||||| ||||||| |||||||| |||||||||    
T  28459653 tccaacaaactataaactaacttttttgtgttgccaaacaca 28459612  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 30411310 - 30411351
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  30411310 tccaacaagctataagctagcttttttgtgttaccaaacaca 30411351  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 36181431 - 36181472
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  36181431 aacaaactataagttagcttttttgtgttaccaaacacagcc 36181472  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 40674811 - 40674747
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaact-ataagctaacttatttgtgttaccaaacaca 66  Q
    ||||||| |||||||||| || | ||||||| || |||||||||||| ||||||||||||||||||    
T  40674811 atccaataagcttataagctagt-ccaacaagcttataagctaacttttttgtgttaccaaacaca 40674747  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 55610702 - 55610657
Alignment:
Q  27 caacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    |||||| ||||||||||  || ||||||||||||||||||||||||    
T  55610702 caacaagctataagctagtttttttgtgttaccaaacacagcctaa 55610657  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 30996710 - 30996750
Alignment:
Q  35 tataagctaacttatttgtgttaccaaacacagcctaaatg 75  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  30996710 tataaactagcttatttgtgttaccaaacacaacctaaatg 30996750  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 40685821 - 40685777
Alignment:
Q  28 aacaaactataagctaacttatttgtgttaccaaacacagcctaa 72  Q
    ||||| || ||||||| ||||||| ||||||||||||||||||||    
T  40685821 aacaagctgtaagctagcttatttatgttaccaaacacagcctaa 40685777  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 50792474 - 50792518
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagcc 69  Q
    |||||||| |||||| ||| |||||| ||||||||||||||||||    
T  50792474 tccaacaagctataaactagcttattcgtgttaccaaacacagcc 50792518  T

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Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 57892 - 57956
Alignment:
Q  9 gagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    ||||||||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  57892 gagcttataagctaat-ccaacaagctataagctagcttttttgtgttaccaaacacagccaaaat 57956  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 157651 - 157714
Alignment:
Q  2 atccaatgagcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacaca 66  Q
    |||||| ||||||||||| |||| | |||||||||||||||| ||||||| ||||||||||||||    
T  157651 atccaacgagcttataagctaat-ctaacaaactataagctagcttatttatgttaccaaacaca 157714  T

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Target: scaffold1391 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 1539 - 1602
Alignment:
Q  10 agcttataagttaattccaacaaactataagctaacttatttgtgttaccaaacacagcctaaat 74  Q
    |||||||||| || ||| ||||||||||||| || ||||||| |||||||||||| |||||||||    
T  1539 agcttataagctagttc-aacaaactataagatagcttatttatgttaccaaacagagcctaaat 1602  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 76285 - 76242
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagc 68  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||    
T  76285 tccaacaaactataagctaccttttttatgttaccaaacacagc 76242  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 14249 - 14295
Alignment:
Q  25 tccaacaaactataagctaacttatttgtgttaccaaacacagccta 71  Q
    ||||| ||||||||||||| ||| |||||||||||||||||| ||||    
T  14249 tccaataaactataagctagcttttttgtgttaccaaacacaaccta 14295  T

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