View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2015_high_6 (Length: 463)
Name: NF2015_high_6
Description: NF2015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2015_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 425; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 15 - 447
Target Start/End: Original strand, 45064649 - 45065081
Alignment:
| Q |
15 |
atcgatatttgaggatggaagagttctgtccatattaagtttgaaacatccttcagactttcactcatgctgatacacaaggtaattccacaacacatga |
114 |
Q |
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| T |
45064649 |
atcgatatttgaggatggaagagttctgtccatattaagtttgaaacatccttcagaccttcactcatgctgatacacaaggtaattccacaacacatga |
45064748 |
T |
|
| Q |
115 |
aaaattgtaccacaatgcttgtgcatgtagttcataatatgtaactagttcacaggatgttttataatcgaacgagaaaatatcagaacaatgaagatgc |
214 |
Q |
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| T |
45064749 |
aaaattgtaccacaatgcttgtgcatgtagttcataatatgtaactagttcacaggatgttttataatcggacgagaaaatatcagaacaatgaagatgc |
45064848 |
T |
|
| Q |
215 |
taaaagttgattgaaggaagaaactcacaggaatccttataacatcgtctcttttccatccgagaggattgtaaacgacgacaacctacaaaaatcaata |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45064849 |
taaaagttgattgaaggaagaaactcacaggaatccttataacatcgtctcttttccatccgagaggattgtaaacgacgacaacctacaaaaatcaata |
45064948 |
T |
|
| Q |
315 |
taaatcatgaaaatattgatggataaaagtcttgcattctgataagaaacagattagttgtcatagccagctagctcctcaccagatctttcccatggga |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45064949 |
taaatcatgaaaatattgatggataaaagtcttgcattctgataagaaacagattagttgtcatagccagctagctcctcaccagatctttcccatggga |
45065048 |
T |
|
| Q |
415 |
gaaatcaacttctgatgcaggacagtaacttat |
447 |
Q |
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| T |
45065049 |
gaaatcaacttctgatgcaggacagtaacttat |
45065081 |
T |
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