View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2015_low_12 (Length: 336)

Name: NF2015_low_12
Description: NF2015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2015_low_12
NF2015_low_12
[»] chr8 (38 HSPs)
chr8 (11-336)||(5990362-5990703)
chr8 (192-335)||(4696408-4696553)
chr8 (71-335)||(6127235-6127522)
chr8 (198-334)||(3051278-3051416)
chr8 (192-336)||(19752193-19752338)
chr8 (206-336)||(5702279-5702412)
chr8 (192-313)||(7492997-7493118)
chr8 (207-331)||(26403031-26403159)
chr8 (71-336)||(23799375-23799660)
chr8 (192-336)||(28307714-28307860)
chr8 (206-336)||(7412507-7412638)
chr8 (234-336)||(9054219-9054323)
chr8 (77-180)||(9054810-9054914)
chr8 (216-336)||(4456205-4456326)
chr8 (207-336)||(19175553-19175683)
chr8 (252-334)||(1261751-1261837)
chr8 (71-193)||(6813697-6813820)
chr8 (99-180)||(3051162-3051244)
chr8 (14-186)||(28307519-28307692)
chr8 (271-335)||(38863774-38863841)
chr8 (71-169)||(26403214-26403313)
chr8 (252-325)||(31071035-31071112)
chr8 (280-336)||(4162403-4162460)
chr8 (271-336)||(9765650-9765718)
chr8 (120-180)||(7493146-7493206)
chr8 (71-173)||(5702463-5702566)
chr8 (191-286)||(13204634-13204729)
chr8 (271-336)||(4731561-4731627)
chr8 (271-336)||(4733712-4733778)
chr8 (71-191)||(7412355-7412476)
chr8 (271-336)||(15212689-15212755)
chr8 (271-336)||(33352053-33352119)
chr8 (129-180)||(41364927-41364980)
chr8 (271-336)||(43036326-43036392)
chr8 (280-336)||(30143245-30143302)
chr8 (196-233)||(31513236-31513273)
chr8 (280-335)||(6598876-6598932)
chr8 (280-335)||(6674329-6674385)
[»] chr7 (40 HSPs)
chr7 (192-336)||(20284241-20284387)
chr7 (192-336)||(2580542-2580687)
chr7 (192-336)||(23402812-23402958)
chr7 (79-335)||(2647497-2647771)
chr7 (192-336)||(3047406-3047552)
chr7 (81-336)||(33332249-33332523)
chr7 (192-336)||(9184973-9185119)
chr7 (46-336)||(4796468-4796776)
chr7 (192-335)||(9189806-9189952)
chr7 (71-336)||(5817069-5817352)
chr7 (14-180)||(28617198-28617365)
chr7 (205-336)||(46516104-46516237)
chr7 (71-336)||(29159817-29160105)
chr7 (192-313)||(9235406-9235527)
chr7 (71-301)||(49091675-49091924)
chr7 (252-336)||(44847924-44848010)
chr7 (239-334)||(2479535-2479632)
chr7 (216-336)||(21989085-21989206)
chr7 (207-301)||(35960984-35961078)
chr7 (71-286)||(55962-56195)
chr7 (252-334)||(18408976-18409062)
chr7 (239-336)||(47263865-47263964)
chr7 (71-184)||(46516278-46516393)
chr7 (252-334)||(18413852-18413938)
chr7 (252-334)||(21640022-21640108)
chr7 (252-334)||(21646220-21646306)
chr7 (71-191)||(3047268-3047390)
chr7 (71-186)||(21983298-21983416)
chr7 (284-336)||(4253742-4253795)
chr7 (76-162)||(2580409-2580495)
chr7 (270-336)||(19502081-19502148)
chr7 (271-336)||(1113560-1113626)
chr7 (71-140)||(9190021-9190091)
chr7 (271-309)||(12098058-12098096)
chr7 (271-336)||(38671421-38671487)
chr7 (271-336)||(43864147-43864213)
chr7 (284-336)||(36574728-36574781)
chr7 (271-335)||(47676335-47676400)
chr7 (280-336)||(48491482-48491539)
chr7 (129-180)||(41649091-41649143)
[»] chr2 (55 HSPs)
chr2 (71-335)||(2869492-2869776)
chr2 (71-336)||(14698808-14699090)
chr2 (71-336)||(31056058-31056343)
chr2 (71-336)||(33118150-33118433)
chr2 (206-336)||(21630111-21630243)
chr2 (206-336)||(33528423-33528555)
chr2 (207-336)||(34389018-34389149)
chr2 (71-335)||(13569342-13569626)
chr2 (78-336)||(40014946-40015222)
chr2 (206-336)||(17865371-17865503)
chr2 (71-335)||(39482945-39483230)
chr2 (71-336)||(2837826-2838113)
chr2 (206-336)||(20522388-20522520)
chr2 (22-180)||(27149267-27149425)
chr2 (192-336)||(15903689-15903835)
chr2 (216-336)||(28258976-28259097)
chr2 (71-336)||(34682130-34682417)
chr2 (71-336)||(10707051-10707335)
chr2 (216-336)||(36757561-36757682)
chr2 (229-336)||(10445266-10445375)
chr2 (207-336)||(8040230-8040364)
chr2 (207-335)||(8389949-8390079)
chr2 (192-333)||(35397662-35397804)
chr2 (227-336)||(1344343-1344456)
chr2 (239-334)||(40739033-40739130)
chr2 (206-336)||(41586349-41586482)
chr2 (207-336)||(23078270-23078400)
chr2 (71-191)||(10445405-10445527)
chr2 (134-180)||(28770747-28770793)
chr2 (76-163)||(34388877-34388965)
chr2 (252-329)||(3491964-3492045)
chr2 (77-191)||(8040080-8040198)
chr2 (71-169)||(8390134-8390233)
chr2 (252-329)||(25409843-25409924)
chr2 (205-334)||(28770573-28770706)
chr2 (71-162)||(28259169-28259260)
chr2 (145-180)||(18674374-18674409)
chr2 (71-169)||(20522234-20522333)
chr2 (129-180)||(723824-723877)
chr2 (271-336)||(11151790-11151856)
chr2 (129-180)||(11690536-11690589)
chr2 (129-180)||(14633906-14633959)
chr2 (76-169)||(16940193-16940287)
chr2 (76-169)||(17010858-17010952)
chr2 (99-176)||(27139844-27139922)
chr2 (271-336)||(39284788-39284854)
chr2 (280-336)||(42269609-42269669)
chr2 (271-336)||(42362255-42362321)
chr2 (129-180)||(42362387-42362440)
chr2 (129-162)||(4561143-4561176)
chr2 (145-174)||(16388449-16388478)
chr2 (81-169)||(17865227-17865316)
chr2 (97-169)||(21629983-21630056)
chr2 (206-243)||(27139968-27140005)
chr2 (120-180)||(15903863-15903922)
[»] chr5 (39 HSPs)
chr5 (192-336)||(28832409-28832555)
chr5 (71-336)||(11181631-11181916)
chr5 (71-336)||(10281765-10282052)
chr5 (192-336)||(31300394-31300540)
chr5 (194-336)||(24553326-24553470)
chr5 (192-336)||(19588897-19589043)
chr5 (207-335)||(17003759-17003889)
chr5 (198-336)||(7160703-7160843)
chr5 (71-336)||(33030738-33031023)
chr5 (207-336)||(11916771-11916901)
chr5 (216-336)||(14520407-14520528)
chr5 (192-267)||(42127280-42127355)
chr5 (207-336)||(12083976-12084106)
chr5 (216-336)||(9353131-9353252)
chr5 (216-334)||(15464711-15464830)
chr5 (207-336)||(3880467-3880600)
chr5 (71-180)||(6741866-6741976)
chr5 (239-334)||(36932149-36932246)
chr5 (71-267)||(2630245-2630458)
chr5 (14-184)||(7160872-7161041)
chr5 (252-334)||(35387876-35387962)
chr5 (252-334)||(38219612-38219698)
chr5 (239-336)||(42127169-42127268)
chr5 (71-191)||(12084137-12084258)
chr5 (271-336)||(13488106-13488172)
chr5 (77-191)||(3880319-3880435)
chr5 (206-266)||(5611308-5611368)
chr5 (76-163)||(28832278-28832365)
chr5 (293-336)||(5007454-5007497)
chr5 (71-191)||(11916933-11917055)
chr5 (298-332)||(13695931-13695965)
chr5 (134-180)||(30899945-30899991)
chr5 (280-336)||(3075866-3075923)
chr5 (71-155)||(9353331-9353415)
chr5 (280-336)||(31182876-31182933)
chr5 (71-155)||(36932349-36932433)
chr5 (280-336)||(39468757-39468814)
chr5 (131-180)||(8566028-8566079)
chr5 (5-45)||(28537575-28537615)
[»] chr3 (61 HSPs)
chr3 (192-336)||(3323479-3323625)
chr3 (71-336)||(25795795-25796080)
chr3 (192-336)||(24694954-24695100)
chr3 (207-336)||(40592570-40592701)
chr3 (192-335)||(3328146-3328291)
chr3 (71-336)||(8370277-8370559)
chr3 (192-336)||(1417279-1417425)
chr3 (71-336)||(3715788-3716075)
chr3 (71-336)||(1736092-1736378)
chr3 (192-336)||(25929184-25929331)
chr3 (71-336)||(26299002-26299286)
chr3 (71-336)||(48438228-48438513)
chr3 (71-336)||(21711237-21711520)
chr3 (192-336)||(8126782-8126928)
chr3 (192-336)||(37466447-37466593)
chr3 (207-335)||(47649737-47649869)
chr3 (71-295)||(18552716-18552956)
chr3 (206-336)||(47923692-47923824)
chr3 (207-336)||(36029261-36029391)
chr3 (207-336)||(35925646-35925776)
chr3 (216-334)||(27453137-27453254)
chr3 (207-336)||(16264517-16264647)
chr3 (216-334)||(27986246-27986365)
chr3 (207-336)||(6794503-6794633)
chr3 (207-336)||(39032343-39032472)
chr3 (192-336)||(40844802-40844953)
chr3 (216-336)||(27974740-27974861)
chr3 (257-336)||(4386765-4386846)
chr3 (83-180)||(4386890-4386988)
chr3 (216-334)||(33386465-33386584)
chr3 (239-334)||(32143522-32143619)
chr3 (280-334)||(23410537-23410593)
chr3 (14-141)||(25929445-25929572)
chr3 (71-300)||(30709615-30709863)
chr3 (99-336)||(21353604-21353865)
chr3 (239-334)||(26928389-26928486)
chr3 (252-334)||(37725887-37725971)
chr3 (271-331)||(23392108-23392170)
chr3 (252-334)||(1306162-1306248)
chr3 (77-191)||(36029113-36029229)
chr3 (259-335)||(27038270-27038348)
chr3 (71-180)||(40592744-40592855)
chr3 (78-167)||(47923882-47923972)
chr3 (71-162)||(16264364-16264455)
chr3 (206-266)||(21156595-21156655)
chr3 (259-336)||(27026925-27027004)
chr3 (145-180)||(25517071-25517106)
chr3 (129-180)||(760882-760935)
chr3 (271-336)||(5236655-5236721)
chr3 (120-174)||(5366293-5366347)
chr3 (283-336)||(5373126-5373180)
chr3 (129-180)||(22835082-22835135)
chr3 (271-336)||(22835201-22835267)
chr3 (134-180)||(29100238-29100284)
chr3 (271-336)||(39153560-39153626)
chr3 (71-191)||(40844666-40844787)
chr3 (280-336)||(32744634-32744691)
chr3 (271-335)||(40734402-40734467)
chr3 (280-336)||(53921711-53921768)
chr3 (147-179)||(2075156-2075188)
chr3 (76-162)||(6794694-6794781)
[»] chr6 (28 HSPs)
chr6 (71-336)||(31979527-31979810)
chr6 (192-336)||(31936729-31936873)
chr6 (206-335)||(24435772-24435902)
chr6 (76-336)||(5572042-5572319)
chr6 (77-336)||(21801141-21801421)
chr6 (206-336)||(31086273-31086404)
chr6 (10-192)||(31076902-31077084)
chr6 (71-336)||(14521688-14521974)
chr6 (229-335)||(5017296-5017404)
chr6 (76-267)||(10077038-10077243)
chr6 (206-335)||(22963866-22963996)
chr6 (206-335)||(23824397-23824527)
chr6 (238-334)||(22709208-22709306)
chr6 (207-335)||(31076736-31076866)
chr6 (76-295)||(18232864-18233101)
chr6 (239-336)||(5757277-5757376)
chr6 (77-298)||(4629974-4630211)
chr6 (280-336)||(21272788-21272846)
chr6 (210-325)||(5385765-5385881)
chr6 (14-169)||(24435955-24436110)
chr6 (71-162)||(5757470-5757561)
chr6 (135-178)||(21247076-21247119)
chr6 (270-336)||(33160551-33160618)
chr6 (206-308)||(33721387-33721489)
chr6 (252-313)||(21356249-21356310)
chr6 (129-180)||(22424905-22424960)
chr6 (271-335)||(28137607-28137672)
chr6 (270-306)||(31404871-31404907)
[»] chr1 (45 HSPs)
chr1 (192-336)||(47102638-47102784)
chr1 (192-336)||(47098624-47098770)
chr1 (192-336)||(40816613-40816761)
chr1 (71-336)||(19072942-19073228)
chr1 (71-336)||(19120832-19121118)
chr1 (71-336)||(13598412-13598698)
chr1 (192-336)||(32889592-32889736)
chr1 (71-311)||(16124340-16124599)
chr1 (71-336)||(29651825-29652111)
chr1 (208-336)||(9476430-9476560)
chr1 (71-336)||(47703732-47704019)
chr1 (192-336)||(22819581-22819729)
chr1 (46-336)||(27104201-27104481)
chr1 (207-336)||(3281875-3282005)
chr1 (207-336)||(21536369-21536499)
chr1 (216-334)||(13604423-13604542)
chr1 (216-336)||(37069944-37070065)
chr1 (207-331)||(26644702-26644827)
chr1 (196-313)||(9022730-9022845)
chr1 (252-334)||(19361230-19361315)
chr1 (252-334)||(19358641-19358726)
chr1 (134-180)||(35109510-35109556)
chr1 (252-334)||(19366105-19366191)
chr1 (252-334)||(24202566-24202652)
chr1 (73-178)||(22819444-22819551)
chr1 (271-336)||(4552836-4552902)
chr1 (71-191)||(9476275-9476397)
chr1 (284-333)||(3460607-3460656)
chr1 (271-335)||(45644554-45644619)
chr1 (270-336)||(3189234-3189301)
chr1 (270-336)||(3198051-3198118)
chr1 (270-336)||(3206890-3206957)
chr1 (120-191)||(9023801-9023872)
chr1 (71-180)||(47098797-47098907)
chr1 (271-336)||(197107-197173)
chr1 (129-180)||(834247-834300)
chr1 (271-336)||(834366-834432)
chr1 (71-191)||(3281722-3281843)
chr1 (129-180)||(8550867-8550920)
chr1 (71-191)||(26644859-26644980)
chr1 (192-241)||(17345415-17345464)
chr1 (123-191)||(40816775-40816844)
chr1 (137-198)||(1050532-1050594)
chr1 (120-180)||(32736969-32737029)
chr1 (125-177)||(48382457-48382509)
[»] chr4 (46 HSPs)
chr4 (206-336)||(5268999-5269131)
chr4 (71-309)||(39774133-39774388)
chr4 (71-336)||(10047393-10047679)
chr4 (207-336)||(3777716-3777847)
chr4 (192-336)||(25861832-25861979)
chr4 (71-336)||(5112251-5112535)
chr4 (207-336)||(24333978-24334111)
chr4 (207-336)||(3793877-3794010)
chr4 (207-336)||(16623092-16623222)
chr4 (207-336)||(16628671-16628801)
chr4 (71-336)||(1983099-1983383)
chr4 (192-336)||(42599374-42599519)
chr4 (71-336)||(38152237-38152522)
chr4 (192-313)||(18377511-18377632)
chr4 (206-336)||(6743214-6743345)
chr4 (216-333)||(5396473-5396591)
chr4 (207-336)||(8689295-8689425)
chr4 (71-336)||(36315029-36315312)
chr4 (71-336)||(36329238-36329521)
chr4 (204-336)||(54867344-54867477)
chr4 (271-336)||(51336966-51337033)
chr4 (216-336)||(5143437-5143558)
chr4 (271-336)||(6542380-6542447)
chr4 (71-169)||(16630664-16630763)
chr4 (82-178)||(18377384-18377481)
chr4 (216-334)||(31985434-31985553)
chr4 (216-336)||(5147855-5147976)
chr4 (14-169)||(24333766-24333922)
chr4 (129-180)||(37781935-37781986)
chr4 (71-191)||(16623254-16623376)
chr4 (206-336)||(37782029-37782162)
chr4 (77-169)||(3796503-3796596)
chr4 (271-335)||(4587860-4587927)
chr4 (192-241)||(34670561-34670610)
chr4 (71-162)||(5143273-5143365)
chr4 (252-334)||(28468335-28468421)
chr4 (71-154)||(34495822-34495906)
chr4 (136-180)||(34670638-34670682)
chr4 (270-336)||(9927655-9927722)
chr4 (271-336)||(5429582-5429648)
chr4 (71-156)||(39246008-39246094)
chr4 (271-336)||(48142945-48143011)
chr4 (271-336)||(52082856-52082922)
chr4 (280-336)||(12739758-12739815)
chr4 (280-336)||(12747964-12748021)
chr4 (280-336)||(54200114-54200171)
[»] scaffold0006 (3 HSPs)
scaffold0006 (71-336)||(5697-5983)
scaffold0006 (207-336)||(2661-2792)
scaffold0006 (216-334)||(133080-133199)
[»] scaffold0148 (1 HSPs)
scaffold0148 (71-336)||(10743-11031)
[»] scaffold0087 (3 HSPs)
scaffold0087 (216-336)||(36631-36752)
scaffold0087 (216-336)||(43760-43881)
scaffold0087 (71-162)||(43953-44044)
[»] scaffold0036 (2 HSPs)
scaffold0036 (207-336)||(85850-85981)
scaffold0036 (77-169)||(85703-85795)
[»] scaffold0078 (2 HSPs)
scaffold0078 (205-336)||(23696-23830)
scaffold0078 (71-180)||(23542-23656)
[»] scaffold0140 (1 HSPs)
scaffold0140 (252-334)||(8218-8302)
[»] scaffold0098 (1 HSPs)
scaffold0098 (216-336)||(45375-45497)
[»] scaffold0188 (2 HSPs)
scaffold0188 (252-334)||(17749-17835)
scaffold0188 (252-334)||(23842-23928)
[»] scaffold0076 (1 HSPs)
scaffold0076 (135-198)||(15943-16006)
[»] scaffold0060 (1 HSPs)
scaffold0060 (273-335)||(33368-33432)
[»] scaffold0002 (1 HSPs)
scaffold0002 (134-179)||(14760-14805)
[»] scaffold0176 (1 HSPs)
scaffold0176 (255-336)||(17466-17549)
[»] scaffold0016 (1 HSPs)
scaffold0016 (134-180)||(102467-102513)


Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 11 - 336
Target Start/End: Complemental strand, 5990703 - 5990362
Alignment:
Q  11 tcaaaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaacaagtttggtccaatatgacatactgtgggggagagagcggc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5990703 tcaaaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaacaagtttggtccaatatgacatattgtgggggagagagcggc 5990604  T
Q  111 tctccaattactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttca---------------- 194  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||                    
T  5990603 tctccaattactaagatgaaagtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcacccatttttcaagtca 5990504  T
Q  195 cccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttcca 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5990503 cccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttccca 5990404  T
Q  295 acccaagagaacctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5990403 acccaagagaacctcactaaagacactcaaccctaaagttac 5990362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 4696553 - 4696408
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| ||| |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||| | ||||| || |||||||||||     
T  4696553 tcacccacactctcattgaatcctaagagaaaacacaaaaggaagctttttgatctttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 4696454  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||    
T  4696453 ccaacccaagagatcctcactacaaagacactcaaccctaaagtta 4696408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 335
Target Start/End: Original strand, 6127235 - 6127522
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||| ||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  6127235 agttcggtccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 6127334  T
Q  170 cacaaa-gaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||||| ||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||||||||||||||| | |||     
T  6127335 tacaaaagaacaagacctaatttctacccattttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaaagaaagctttttgatccttcc 6127434  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    |||||||||||||||| | |||| ||| ||||||||||| ||||||  |||||||||||||||  |||||||||||||||| ||||||    
T  6127435 aatggtgaaatctcactacccaaaatgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagtta 6127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 334
Target Start/End: Original strand, 3051278 - 3051416
Alignment:
Q  198 acactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc 297  Q
    ||||| |||||||||||||||||||| ||| |||| ||||||||||| ||||| |||||||||||||||| | |||||||| ||||||||||| |||||     
T  3051278 acactctcaatgaatcctaagagaaagcacaaaaggaagctttttgatctttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaact 3051377  T
Q  298 caagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||| ||||  ||||||||||||||||||||||    
T  3051378 caagagaaccccactacaaagacactcaaccctaaagtt 3051416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 19752338 - 19752193
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||| ||||||||||| | ||||| || ||||||| |||     
T  19752338 tcacccacactctcaatgaatcctaagagaaaacac-aaaggaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatatttc 19752240  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
     ||||||||||||||||||||  ||||||||||||||||||||||||    
T  19752239 acaacccaagagaacctcactacaaagacactcaaccctaaagttac 19752193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 5702412 - 5702279
Alignment:
Q  206 aatgaatcctaagagaaaa-cactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagaga 304  Q
    ||||||||||||||||||| ||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||| ||| |||||||||||||    
T  5702412 aatgaatcctaagagaaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagaga 5702313  T
Q  305 acctcact--aaagacactcaaccctaaagttac 336  Q
     |||||||  ||||||||||||||||||||||||    
T  5702312 tcctcactacaaagacactcaaccctaaagttac 5702279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 7493118 - 7492997
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| ||||| |||||||||| |||||||||||| ||||||||||| | ||| ||| |||||||||||| | ||||| || |||||||||||     
T  7493118 tcacccacactctcaataaatcctaagaaaaaacactaaaggaagctttttgatccttctaattgtgaaatctcactacccaaggtgtttacaatgtttc 7493019  T
Q  292 ccaacccaagagaacctcacta 313  Q
    |||| |||||||||||||||||    
T  7493018 ccaatccaagagaacctcacta 7492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 26403159 - 26403031
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagaga 304  Q
    ||||||| ||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||  |||||||    
T  26403159 atgaatcataagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagaga 26403060  T
Q  305 acctcact--aaagacactcaaccctaaa 331  Q
    ||||||||  |||||||||||||||||||    
T  26403059 acctcactacaaagacactcaaccctaaa 26403031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 23799660 - 23799375
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||| ||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  23799660 agttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagct 23799561  T
Q  170 caca-aagaacacgacctcattttcaccca------------cactttca----atgaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| ||||||| ||||| ||||  |||||            |||| |||    |||||||||||| |||||||| |||| ||||||||||| | ||| |    
T  23799560 tacacaagaacaagacctaatttctacccattttgtgtcacccactgtcacaatatgaatcctaagggaaaacacaaaaggaagctttttgatccttcca 23799461  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||| | |  |||| || ||||||||||  ||||||||||||| |||| ||  ||||||||||||||||||||||||    
T  23799460 atggtgaaatctccctactcaaggtgtttacaatgttccccaacccaagagatcctctctacaaagacactcaaccctaaagttac 23799375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 28307714 - 28307860
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| ||| |||||||||| ||||||||| |||||||||||||| | | ||| ||| |||||||||||| | ||||| || | |||||||||     
T  28307714 tcacccacactctcactgaatcctaaaagaaaacacaaaagaaagcttttttatccttccaattgtgaaatctcactacccaaggtgttaacaatgtttc 28307813  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||| |||||||||   ||  ||||||||||||| ||||||||||    
T  28307814 ccaacctaagagaaccgtgctacaaagacactcaactctaaagttac 28307860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 7412507 - 7412638
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||| |||||||||| |||  |||| ||||||||   |||||| |||||||||||||||| | ||||| || ||||||||||| |||||||||||||     
T  7412507 aatgaaccctaagagaagacataaaaggaagcttttgatcctttc-aatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 7412605  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||| ||  ||||||||||||||||||||||||    
T  7412606 cctctctacaaagacactcaaccctaaagttac 7412638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 336
Target Start/End: Complemental strand, 9054323 - 9054219
Alignment:
Q  234 aagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaa 331  Q
    ||||||||||| | ||| |||||||||||||||| | ||||| |||||| |||||||||||||||||||||| ||||||  ||| |||||||| ||||||    
T  9054323 aagctttttgatccttccaatggtgaaatctcactacccaaggtgattataatgttttccaacccaagagaatctcactacaaaaacactcaatcctaaa 9054224  T
Q  332 gttac 336  Q
    |||||    
T  9054223 gttac 9054219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 9054914 - 9054810
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaa 175  Q
    |||||||||||| |||| ||| ||||||||| |||||| |||  ||||||||||||| ||||||||   |||||||||||||||||||||||| ||||||    
T  9054914 gtccaatatgacctactctggaggagagagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaattagcttaaaagcgcacaaa 9054815  T
Q  176 gaaca 180  Q
    |||||    
T  9054814 gaaca 9054810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 4456205 - 4456326
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  4456205 aagagaagacacaaaaggaagctttt-gatccttctaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 4456303  T
Q  314 aagacactcaaccctaaagttac 336  Q
     ||||||||||||||||||||||    
T  4456304 gagacactcaaccctaaagttac 4456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 19175683 - 19175553
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| || ||||| || | ||| ||| |||||||||||| | ||||| || ||||||||||| |||| |||||||| |    
T  19175683 atgaaccctaagagaagacacaaaaggaaactttt-gatccttccaatagtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatc 19175585  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  19175584 ctcactacaaagacactcaaccctaaagttac 19175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 1261837 - 1261751
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| |||||||||||||||  ||||||||||||| |||| ||  ||||||||||||||||| ||||    
T  1261837 aatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagtt 1261751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 6813697 - 6813820
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||||||| || |||  | ||||||||||| ||||||||||  | ||||||||||| || |||||   ||||||||||||||||||  |||||    
T  6813697 agttcggtccaatataacctacactaggggagagagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaattagcttgcaagct 6813796  T
Q  170 cacaaagaacacgacctcattttc 193  Q
    |||||||||||  |||| ||||||    
T  6813797 cacaaagaacaaaacctaattttc 6813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 3051162 - 3051244
Alignment:
Q  99 ggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||||  |||||||||  ||||||||||||| ||||||||   |||||||||||||||| ||| |||||||||||||||    
T  3051162 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaaca 3051244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 28307519 - 28307692
Alignment:
Q  14 aaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaaca-agtttggtccaatatgacatactgtgggggagagagcggctc 112  Q
    ||||||| ||| ||||| |||||||||||||| | |  |||  |||||||||||||  |||| ||||||| ||||| |||| |||||  |||||| ||||    
T  28307519 aaagcaataaatataagaaagcaagaatgaaataaa--cacgccaagattggtaacccagttcggtccaaaatgacctactctggggatgagagcagctc 28307616  T
Q  113 tccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagctt-aaaagctcacaaagaacacgacct 186  Q
    ||||||  ||||||||| |||  ||||| |   ||||||||||||||| || ||||||||| |||||||| |||||    
T  28307617 tccaatccactaagatggaagtaatacacatgggttacaagaaattagttttaaaagctcataaagaacaagacct 28307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 38863841 - 38863774
Alignment:
Q  271 ccaagatgattacaa-tgttttccaacccaagagaac--ctcactaaagacactcaaccctaaagtta 335  Q
    |||||||| |||||| ||||| |||||||||||||||  |||||||||||||||||||| ||||||||    
T  38863841 ccaagatgtttacaaatgtttcccaacccaagagaactcctcactaaagacactcaaccttaaagtta 38863774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 26403313 - 26403214
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||||  |||| | |||||||||||| |||||    
T  26403313 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttataggaaattagcttacaagct 26403214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 31071112 - 31071035
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaac 325  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||||||  |||||||||||||    
T  31071112 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 4162460 - 4162403
Alignment:
Q  280 ttacaatgttttccaacccaagagaa-cctcactaaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||||| ||| |  |||||| |||||||||||||||||    
T  4162460 ttacaatgttttccaacccaagagaaccctaatcaaagaccctcaaccctaaagttac 4162403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 9765718 - 9765650
Alignment:
Q  271 ccaagatgattacaatgttttccaaccc--aagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| |||||||  |||||||||||||| |||||||||||||||| |||||||    
T  9765718 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactcaaagacactcaaccctcaagttac 9765650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 7493206 - 7493146
Alignment:
Q  120 actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    ||||||||||||| |||||||| | |||| ||||||||| | |||||||||||| ||||||    
T  7493206 actaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcacacagaaca 7493146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 5702566 - 5702463
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaattac-taagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | |||||||||||||  | |||||||  | || |||||||| | |||||||  ||||||||||||||||||| |||||    
T  5702566 agttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 5702467  T
Q  170 caca 173  Q
     |||    
T  5702466 taca 5702463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 13204729 - 13204634
Alignment:
Q  191 ttcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaat 286  Q
    |||||| ||||| ||||||||||||| ||||||| | |||| ||||||||||||   | | || ||||||||||||| | ||||| || |||||||    
T  13204729 ttcacctacactctcaatgaatcctatgagaaaatattaaataaagctttttgattctcccaacggtgaaatctcactacccaaggtgtttacaat 13204634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 4731627 - 4731561
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  4731627 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 4731561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 4733778 - 4733712
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  4733778 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 4733712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 7412355 - 7412476
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||| || |||  |||||    
T  7412355 agttcggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaaataacttgcaagct 7412453  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  7412454 tacacaagaacaagacctaattt 7412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 15212755 - 15212689
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  15212755 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 15212689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 33352119 - 33352053
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  33352119 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 33352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 41364927 - 41364980
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||  |||||||||||||||||||||  || |||||||||||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaaca 41364980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 43036392 - 43036326
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  43036392 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 43036326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 30143302 - 30143245
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  30143302 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 30143245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 31513273 - 31513236
Alignment:
Q  196 ccacactttcaatgaatcctaagagaaaacactaaaga 233  Q
    |||||||  |||||||||||||||||||||||||||||    
T  31513273 ccacactcacaatgaatcctaagagaaaacactaaaga 31513236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 6598932 - 6598876
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagtta 335  Q
    ||||||||||| ||||||||||||||| || |  |||||| ||||||||||||||||    
T  6598932 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtta 6598876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 6674385 - 6674329
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagtta 335  Q
    ||||||||||| ||||||||||||||| || |  |||||| ||||||||||||||||    
T  6674385 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtta 6674329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 20284241 - 20284387
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  20284241 tcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 20284340  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  20284341 ccaacccaagagaacctcactacaaagacactcaaccctaaagttac 20284387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 2580542 - 2580687
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttga-cctttcgaatggtgaaatctcacaaaccaagatgattacaatgttt 290  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||| | ||||| || |||||||||||    
T  2580542 tcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatcctttc-aatggtgaaatctcactacccaaggtgtttacaatgttt 2580640  T
Q  291 tccaacccaagagaacctcac-taaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  2580641 tccaacccaagagaacctcacacaaagacactcaaccctaaagttac 2580687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 23402958 - 23402812
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  23402958 tcactcacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttc 23402859  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  23402858 ccaacccaagagaacctcactacaaagacactcaaccctaaagttac 23402812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 79 - 335
Target Start/End: Complemental strand, 2647771 - 2647497
Alignment:
Q  79 ccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcaca-aag 176  Q
    |||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| ||||| ||| |||    
T  2647771 ccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaag 2647672  T
Q  177 aacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaat 262  Q
    |||| ||||| ||||              ||||||||||| |||||||||||||||||||||||| |||  ||| ||||||| | ||| |||||||||||    
T  2647671 aacaagacctaatttctacccattttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaatgaagttttttgatccttccaatggtgaaat 2647572  T
Q  263 ctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    ||||| | ||||| || |||| |||||| ||||||||||||| |||||||  |||||||||||||||||||||||    
T  2647571 ctcactacccaaggtgcttaccatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtta 2647497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 3047406 - 3047552
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||| ||||| ||||||| |||| ||||||||||| | ||| |||| ||||||||||| | |||||||||||| | |||||     
T  3047406 tcacccacactctcaatgaatcttaagataaaacacaaaaggaagctttttgatccttccaatgatgaaatctcactacccaagatgattatagtgtttc 3047505  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  3047506 ccaacccaagagaacctcactacaaagacactcaaccctaaagttac 3047552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 81 - 336
Target Start/End: Complemental strand, 33332523 - 33332249
Alignment:
Q  81 aatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaa-gaa 178  Q
    |||||||| || | ||||||||||||| || |||||||  ||||||||||||| | |||||||  ||||||||||||||||||| ||||| ||||| |||    
T  33332523 aatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaa 33332424  T
Q  179 cacgacctcattt---------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatc 263  Q
    || ||||| ||||               |||| |||||| ||||||| |||||||||||||||| || | ||||||||||| | ||| ||||||||||||    
T  33332423 caagacctaatttctactcatttttgtatcacgcacactctcaatgattcctaagagaaaacacaaagggaagctttttgatccttccaatggtgaaatc 33332324  T
Q  264 tcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||| | |||||||| |||||||||||  |||||||||||||||| |||  ||| ||||||||||||||||||||    
T  33332323 tcactacccaagatgtttacaatgtttctcaacccaagagaaccttactacaaaaacactcaaccctaaagttac 33332249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 9185119 - 9184973
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| | ||||||||||||||||||||||  ||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  9185119 tcacccacactcttaatgaatcctaagagaaaacacacaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 9185020  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||||||| |||  ||||| ||||||||||||||||||    
T  9185019 ccaacccaagagaaccttactacaaagatactcaaccctaaagttac 9184973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 336
Target Start/End: Complemental strand, 4796776 - 4796468
Alignment:
Q  46 aacaagcacaacaagattggtaaca-agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaa 143  Q
    ||||| |||| |||||||| ||||  |||| ||||||| ||||| || | ||||||||| ||| || ||| |||  |||| |||||||  | |||||||     
T  4796776 aacaaacacaccaagattgttaacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaag 4796677  T
Q  144 tgttacaagaaattagcttaaaagctcaca-aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacact 228  Q
     ||||||||||||||||||| ||||| ||| ||||||| ||||||||||              ||||| ||| | ||||||||||||||||||||||||     
T  4796676 agttacaagaaattagcttataagcttacacaagaacaagacctcatttatacccattttgtgtcacctacattctcaatgaatcctaagagaaaacaca 4796577  T
Q  229 aaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaacc 326  Q
    |||  ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||  |||||||||||| |    
T  4796576 aaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaa-c 4796478  T
Q  327 ctaaagttac 336  Q
    ||||||||||    
T  4796477 ctaaagttac 4796468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 9189952 - 9189806
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| | ||||||||||||||||||||||  ||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  9189952 tcacccacactcttaatgaatcctaagagaaaacacacaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 9189853  T
Q  292 ccaacccaagagaacctcact--aaag-acactcaaccctaaagtta 335  Q
    ||||||||||||||||| |||  |||| |||||||||||||||||||    
T  9189852 ccaacccaagagaaccttactacaaagaacactcaaccctaaagtta 9189806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 5817352 - 5817069
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |||| ||||| ||||||| ||||||||||  ||||| ||||||| ||||||||   ||||||||||||| || ||| ||||    
T  5817352 agttcggtccaatatgacctactctgggg-agagagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaatttgcataagagct 5817254  T
Q  170 cacaaagaacacgacctcattt----------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
    |||||||||||  |||| ||||                |||| |||||| |||||||||||||||| ||||||| |||| ||||||||||| | ||| ||    
T  5817253 cacaaagaacaaaacctaatttctatccatttttcaagtcactcacactctcaatgaatcctaagaaaaaacacaaaaggaagctttttgatccttccaa 5817154  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||||   ||||| |  ||||||||||| |||||| || |||||||||||  |||||||||||||| |||||||||    
T  5817153 tggtgaaatctcactccccaaggtatttacaatgtttcccaaccaaatagaacctcactacaaagacactcaaccataaagttac 5817069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 28617365 - 28617198
Alignment:
Q  14 aaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaaca-agtttggtccaatatgacatactgtgggggagagagcggctc 112  Q
    ||||||||||||||||||||| ||| | ||||| ||| |||| ||| |||| | ||  |||| ||||||||||||| |||| ||||||||||||| ||||    
T  28617365 aaagcaacaaagataagcaagaaaggaagaaaa-caaacacaccaatattgtttacccagttcggtccaatatgacctactctgggggagagagcagctc 28617267  T
Q  113 tccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    ||||||  ||||||||||||| |||||||    ||||||||||||||||||||||||||||||||||||    
T  28617266 tccaatccactaagatgaaagtgatacaatggggttacaagaaattagcttaaaagctcacaaagaaca 28617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 46516237 - 46516104
Alignment:
Q  205 caatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagaga 304  Q
    ||||||||| ||||||||||||| |||  ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||| |||||||    
T  46516237 caatgaatcttaagagaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagaga 46516138  T
Q  305 acctcact--aaagacactcaaccctaaagttac 336  Q
     |||||||  ||||||||||||||||||||||||    
T  46516137 tcctcactacaaagacactcaaccctaaagttac 46516104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 29159817 - 29160105
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | | ||||||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  29159817 agttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagct 29159916  T
Q  170 caca-aagaacacgacctcattttcaccca-------------cactttca----atgaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||  |||||             |||| |||    ||||||||||||||||||||| |||| ||||||||||| | |||     
T  29159917 tacacaagaacaagacctaatttctacccatttttgtgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttcc 29160016  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcac--taaagacactcaaccctaaagttac 336  Q
    |||| ||||||||||| | ||||| || ||||||||||| ||||||  ||||||||||||||  |||||||||||||||| ||||||||    
T  29160017 aatgttgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactataaagacactcaacccaaaagttac 29160105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 9235527 - 9235406
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    |||||| |||| |||| ||||||||||||||||||| |||| ||||||||||| | ||  ||||||||||| |||| | ||||| || |||||||||||     
T  9235527 tcacccgcactctcaacgaatcctaagagaaaacacaaaaggaagctttttgatccttgcaatggtgaaatatcactatccaaggtgtttacaatgtttc 9235428  T
Q  292 ccaacccaagagaacctcacta 313  Q
    |||||||||||||| |||||||    
T  9235427 ccaacccaagagaatctcacta 9235406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 301
Target Start/End: Original strand, 49091675 - 49091924
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    ||||| |||||||||||| || | ||||| |||||||  |||||||||  |||| |||||||| | |||||||  |||||||||||||| |||| |||||    
T  49091675 agtttagtccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagct 49091774  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttc---aatgaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| ||   |||||||||||||||||||||| |||| ||||||||||| | |||     
T  49091775 tacacaagaacaagacctaatttctacccattctgtgtcacccacactctccataatgaatcctaagagaaaacacaaaaggaagctttttgatccttcc 49091874  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaag 301  Q
    |||||||||||||||| | ||||| || || |||||||| ||||||||||    
T  49091875 aatggtgaaatctcactacccaaggtgttttcaatgtttcccaacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 44848010 - 44847924
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  44848010 aatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttac 44847924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 334
Target Start/End: Original strand, 2479535 - 2479632
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcac--taaagacactcaaccctaaagtt 334  Q
    |||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||    
T  2479535 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagtt 2479632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 21989085 - 21989206
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||||||| ||||| |||||| | || | ||| |||||| ||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  21989085 aagagaaaacaataaaggaagcttat-gatccttccaatggtaaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 21989183  T
Q  314 aagacactcaaccctaaagttac 336  Q
    ||||||||||| |||||||||||    
T  21989184 aagacactcaaacctaaagttac 21989206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 35960984 - 35961078
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaag 301  Q
    ||||||| ||||||||||| | |||| ||||||||||| | ||| |||||||||||||||| | | ||| || ||||||||||| ||||||||||    
T  35960984 atgaatcttaagagaaaacgcaaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttacaatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 286
Target Start/End: Original strand, 55962 - 56195
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||| ||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  55962 agttcggtccaatatgacctaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 56060  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||  ||||||||||| | |||     
T  56061 tacacaagaacaagacctaatttctacccattttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaaaagaagctttttgatccttcc 56160  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaat 286  Q
    |||||||||||||||| | ||||| || |||||||    
T  56161 aatggtgaaatctcactacccaaggtgtttacaat 56195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 18408976 - 18409062
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  18408976 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 18409062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 47263865 - 47263964
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||| | ||| |||||||||||||||| | ||||| |  ||||||||||| |||||| ||||||  ||||||  ||||||||||||||||||||||||    
T  47263865 ttttgatccttccaatggtgaaatctcactacccaaggtatttacaatgtttcccaaccgaagagattctcactacaaagacactcaaccctaaagttac 47263964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 46516393 - 46516278
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | | ||||||||||| || |||||||  |||| |||||||| | |||||||  |||||||||||||||||||||||||    
T  46516393 agttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaaagct 46516294  T
Q  170 caca-aagaacacgac 184  Q
     ||| ||||||| |||    
T  46516293 tacacaagaacaagac 46516278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 18413852 - 18413938
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||| ||||||  ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  18413852 aatggtgaaatctcactacccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 18413938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 21640022 - 21640108
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||| ||  ||||||||||||||||| ||||    
T  21640022 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtt 21640108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 21646220 - 21646306
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||| ||  ||||||||||||||||| ||||    
T  21646220 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtt 21646306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 3047268 - 3047390
Alignment:
Q  71 agtttggtccaatatgacatactgtggggg-agagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagc 168  Q
    |||| ||||||||||||| | || |||||| ||||||| | | ||||||  ||||| ||||||| | ||||||   |||||||||||| | |||||||||    
T  3047268 agttcggtccaatatgacctgctctggggggagagagccgttatccaatccactaatatgaaagtggtacaaatgagttacaagaaatcaacttaaaagc 3047367  T
Q  169 tcacaaagaacacgacctcattt 191  Q
    |||||||||||| ||||| ||||    
T  3047368 tcacaaagaacaagacctaattt 3047390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 21983298 - 21983416
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaa-tgttacaagaaattagcttaaaagc 168  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | ||||||||  ||||||||||| ||||||  ||||    
T  21983298 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaaagagttacaagaaaatagcttgcaagc 21983397  T
Q  169 tcaca-aagaacacgacct 186  Q
    | ||| ||||||| |||||    
T  21983398 ttacacaagaacaagacct 21983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 4253742 - 4253795
Alignment:
Q  284 aatgttttccaacccaagagaa-cctcactaaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||||||||    
T  4253742 aatgttttccaacccaagagaaccctcaccaaataccctcaaccctaaagttac 4253795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 2580409 - 2580495
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagctt 162  Q
    ||||||||||||| || | ||||||||||||| ||||||||||  ||||||||||||| | |||||  | ||||||||||| ||||||    
T  2580409 ggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaatga-gttacaagaaaatagctt 2580495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 19502148 - 19502081
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    |||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  19502148 accaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 19502081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 1113626 - 1113560
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  1113626 ccaagttgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 1113560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 9190091 - 9190021
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaa 140  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  ||||||||||||| | |||||    
T  9190091 agttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 9190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 12098058 - 12098096
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctc 309  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  12098058 ccaagatgtttacaatgtttcccaacccaagagaacctc 12098096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 38671421 - 38671487
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  38671421 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 38671487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 43864213 - 43864147
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  43864213 ccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 43864147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 36574728 - 36574781
Alignment:
Q  284 aatgttttccaacccaagagaa-cctcactaaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||| |||||  ||||||  ||||||||||||||||    
T  36574728 aatgttttccaacccaagagaaccctcatcaaagaccgtcaaccctaaagttac 36574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 47676335 - 47676400
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagtta 335  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| ||||||||||||||||    
T  47676335 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtta 47676400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 48491539 - 48491482
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  48491539 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 48491482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 41649091 - 41649143
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa-aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||| || ||||||||||||||||    
T  41649091 aaagggatacaaatgggttacaagaaattagctaaacaagctcacaaagaaca 41649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 71 - 335
Target Start/End: Complemental strand, 2869776 - 2869492
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |||| | ||||||||||  ||||||||||  ||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  2869776 agttcggtccaatatgacctactctaggggagagagtagctctccaatccactaagatgaaagtgatacaaaggagttacaagaaattagcttaaaagct 2869677  T
Q  170 cacaaagaacacga-cctcattt----------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
    |||||||||||  | ||| ||||                ||||||||||| ||||||||||||||||||||||||||| | |||||||||||   ||| |    
T  2869676 cacaaagaacaaaaacctaatttctacccatttttcaagtcacccacactctcaatgaatcctaagagaaaacactaacggaagctttttgattcttcca 2869577  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    |||| |||||||||| | ||||  || ||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||    
T  2869576 atggcgaaatctcactacccaatgtgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccgtaaagtta 2869492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 14699090 - 14698808
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||||  |||||||  ||||||||||||||||||| |||||    
T  14699090 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaaggt-tacaaaagagttacaagaaattagcttataagct 14698992  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaat 254  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||    
T  14698991 tacacaagaacaagacctaatttctacccattttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaat 14698892  T
Q  255 ggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
     |||||||||||| | ||||| || ||||||||||| ||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  14698891 agtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagatcctcactacaaagacactcaaccctaaagttac 14698808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 31056058 - 31056343
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||| ||||||||| || | | ||||||||||| ||||||||||  ||||||||||||| | |||||||  ||||||| ||||||||||| |||||    
T  31056058 agttcggttcaatatgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaataaattagcttataagct 31056157  T
Q  170 cacaaa-gaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttga-cctttcgaa 253  Q
     ||||| ||||| ||||| ||||              ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||| ||    
T  31056158 tacaaaagaacaagacctaatttctacccattttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatcctttc-aa 31056256  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  |||||||||||||||| |||||||    
T  31056257 tggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 31056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 33118150 - 33118433
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  33118150 agttcggtccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaaattagcttataagct 33118249  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaat 254  Q
     ||| ||||||| ||| | ||||              |||||| |||| |||||||||| ||||||||||||| |||| ||||||||||| | ||| |||    
T  33118250 tacacaagaacaagacttaatttctacccattttgtgtcaccctcactctcaatgaatcttaagagaaaacacaaaaggaagctttttgatccttccaat 33118349  T
Q  255 ggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    || |||||||||| | ||||| || ||||||||||  ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  33118350 ggcgaaatctcactacccaaggtgtttacaatgttccccaacccaagagatcctcactacaaagacactcaaccctaaagttac 33118433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 21630111 - 21630243
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| |||||||||||||     
T  21630111 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 21630210  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||  ||||||||||||| ||||||||||    
T  21630211 cctcactacaaagacactcaacactaaagttac 21630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 33528555 - 33528423
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||  || ||||||||||| |||||||||||||     
T  33528555 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaatgtgtttacaatgtttcccaacccaagagat 33528456  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||  ||||||||||||||||||||||||    
T  33528455 cctcactacaaagacactcaaccctaaagttac 33528423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 34389018 - 34389149
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  34389018 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 34389117  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  |||||||| |||||||||||||||    
T  34389118 ctcactacaaagacacacaaccctaaagttac 34389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 335
Target Start/End: Original strand, 13569342 - 13569626
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| ||| |    
T  13569342 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagtt 13569441  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat--gaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| ||||||| ||||| ||||              |||||||| ||  ||||  ||||||||||||||||||| |||| ||||||||||| | ||| |    
T  13569442 tacacaagaacaagacctaatttctaccctttgtttgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttcca 13569541  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    ||||||||||||||| | ||||| || ||| ||||||| ||||||||||||| |||||||  ||||||||| |||||||||||||    
T  13569542 atggtgaaatctcactatccaaggtgtttataatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagtta 13569626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 78 - 336
Target Start/End: Original strand, 40014946 - 40015222
Alignment:
Q  78 tccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaa- 175  Q
    |||||||||||||||| || |||||||| |  | |||||||  ||||||||||||| ||||||||   ||| | |||||||||||||||| ||||||||     
T  40014946 tccaatatgacatactctgagggagagaacatccctccaatccactaagatgaaagtgatacaaatgagttgcgagaaattagcttaaaaactcacaaaa 40015045  T
Q  176 gaacacgacctcattt---------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaa 260  Q
    ||||| ||||| ||||               ||||||||||| ||||| |||||||||| ||| ||| |||| ||||||||||| | ||| |||||||||    
T  40015046 gaacaagacctaatttctactcattttcatgtcacccacactctcaataaatcctaagaaaaatcacaaaaggaagctttttgatccttccaatggtgaa 40015145  T
Q  261 atctcacaaaccaagatgattacaatgttttccaacccaagagaacctcacta-aagacactcaaccctaaagttac 336  Q
    ||||||| | ||||  || ||||||||||| ||||||||||||||||||| || || ||||||||||||||||||||    
T  40015146 atctcactatccaatgtgtttacaatgtttcccaacccaagagaacctcaatacaaaacactcaaccctaaagttac 40015222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 17865371 - 17865503
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||| |||| ||||||||||| | ||| | | |||||||||||| | ||||| || ||||||||||| |||||||||||||     
T  17865371 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttctatttgtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 17865470  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    | |||||  ||||||||||||||||||||||||    
T  17865471 cttcactacaaagacactcaaccctaaagttac 17865503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 335
Target Start/End: Original strand, 39482945 - 39483230
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| |  |||||||  |||| |||||||  | |||||||  ||||||||||||||||||| |||||    
T  39482945 agttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaaattagcttataagct 39483044  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||| ||| ||||||| | |||     
T  39483045 tacacaagaacaagacctaatttctacccattttatgtcacccacactctcaataatgaatcctaagagaaaacacaaaaggaagttttttgatcattcc 39483144  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcac--taaagacactcaaccctaaagtta 335  Q
    |||||||||||||||| | ||||| || ||||||| ||| ||||||||||||| ||||||   |||||||||||||||||||||||    
T  39483145 aatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagtta 39483230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 2838113 - 2837826
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |||| |||||||||||||   ||||||||  ||||| ||||||| ||||||||   |||||||||||||||   || ||||    
T  2838113 agttcggtccaatatgacctactctgggggagagagcacatctccaatccactaaaatgaaagtgatacaaatgagttacaagaaattagtacaagagct 2838014  T
Q  170 cacaaagaacacgacctcatttt----------------cacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
    |||||||||||| |||| |||||                |||||||  | ||||||||||||||||||||||||||||| ||  ||||| | | ||| ||    
T  2838013 cacaaagaacacaacctaatttttgcccatttttcatgtcacccaccttctcaatgaatcctaagagaaaacactaaaggaatattttttatccttccaa 2837914  T
Q  254 tggtgaaa-tctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||| |||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  ||||||||||||||||||||||||    
T  2837913 tggtgaaattctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 2837826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 20522388 - 20522520
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    ||||| |||||||| ||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||| || |||||||||||||     
T  20522388 aatgagtcctaagaaaaaacacaaaaggaagctttttgatcattcaaatggtgaaatctcactacccaagttgtttacaatgcttcccaacccaagagat 20522487  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
     ||||||  ||||||||||||||||||||||||    
T  20522488 actcactacaaagacactcaaccctaaagttac 20522520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 27149425 - 27149267
Alignment:
Q  22 aaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaac-aagtttggtccaatatgacatactgtgggggagagagcggctctccaat-t 119  Q
    |||||||||  ||||| |||||||| ||| |||| ||||| ||||||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||      
T  27149425 aaagataagagagcaataatgaaaa-caaacaca-caagactggtaaccaagtttggtccaatatgacctactatgggggagagagcagctctccaatcc 27149328  T
Q  120 actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    ||||  ||||||| ||||||||   || ||||||||||| |||||||||||||||||||||    
T  27149327 actataatgaaagtgatacaaaggggtaacaagaaattaccttaaaagctcacaaagaaca 27149267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 15903835 - 15903689
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||| |||||| | | ||| |||||||||||||||  | ||||  || |||||||||||     
T  15903835 tcacccacactctcaatgaatcctatgagaaaacacaaaagaaatcttttttatcattccaatggtgaaatctcattatccaatgtgtttacaatgtttc 15903736  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    | |||||||||||||||||||  ||||||| ||||||| || |||||    
T  15903735 ctaacccaagagaacctcactacaaagacattcaacccaaaggttac 15903689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 28259097 - 28258976
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcac--ta 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | |||||||| ||||||||||| ||||||||||||| ||||||  ||    
T  28259097 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcactata 28258999  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  28258998 aagacactcaaccctaaagttac 28258976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 34682417 - 34682130
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||||||  ||||  ||||||| | |||||||  ||||||||||||||||||| | |||    
T  34682417 agttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaattagcttacaggct 34682318  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaa--tgaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| ||||||| ||| | ||||              |||||||| ||  |||  |||||||||||||||||||| |||| || | |||||| | ||| |    
T  34682317 tacacaagaacaagacttaatttctacccattttgtgtcacccactctcacaaggtgaatcctaagagaaaacacaaaaggaaacattttgatccttcaa 34682218  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaa--cccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
     |||||||||||||| | ||||| || ||||||||||||||||  | |||||||||||||||  ||||||||||||||||||||||||    
T  34682217 gtggtgaaatctcactacccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaaccctaaagttac 34682130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 10707335 - 10707051
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||| |  |||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  10707335 agttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagct 10707236  T
Q  170 caca-aagaacacgacctcattttcaccca-----------cactttca----atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
     ||| ||||||| ||||| ||||  |||||           |||| |||    ||||||||||||||||||||| |||| ||||||||||| | ||| ||    
T  10707235 tacacaagaacaagacctaatttctacccatctgtgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttctaa 10707136  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||| || | ||||| || |||||||||||  |||||||||||| |||||||  ||||| | | ||||||||||||||    
T  10707135 tggtgaaatctaactacccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagataataaaccctaaagttac 10707051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 36757682 - 36757561
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  36757682 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 36757584  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  36757583 aagacactcaaccctaaagttac 36757561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 229 - 336
Target Start/End: Complemental strand, 10445375 - 10445266
Alignment:
Q  229 aaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaacc 326  Q
    |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||| |||||||||||||  ||||||| ||||||    
T  10445375 aaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccgagagaacctcactacaaagacattcaacc 10445276  T
Q  327 ctaaagttac 336  Q
    ||||||||||    
T  10445275 ctaaagttac 10445266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 8040230 - 8040364
Alignment:
Q  207 atgaatcctaagagaaaa-cactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagag 303  Q
    |||||||||||||||||| ||  |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||  ||||||    
T  8040230 atgaatcctaagagaaaaacataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagag 8040329  T
Q  304 aacctcact--aaagacactcaaccctaaagttac 336  Q
    ||| |||||  |||||||||||||| |||||||||    
T  8040330 aacttcactacaaagacactcaaccataaagttac 8040364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 8390079 - 8389949
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||||||||||| | || |||||||||||   ||| |||||| ||||||||| | ||||| || ||||||||||| | ||||||||||| |    
T  8390079 atgaatcctaagagaaaacacaagaggaagctttttgattcttccaatggtaaaatctcactatccaaggtgtttacaatgtttcctaacccaagagatc 8389980  T
Q  307 ctcact--aaagacactcaaccctaaagtta 335  Q
     |||||  |||||| ||||||||||||||||    
T  8389979 atcactacaaagaccctcaaccctaaagtta 8389949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 35397662 - 35397804
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||| | ||||||||||||||||||||| || |    ||| || |||| | ||| |||||||||||||||| | ||||| | |||||||||||||    
T  35397662 tcacccacaatctcaatgaatcctaagagaaaatacaatttgaag-ttattgatccttccaatggtgaaatctcactacccaaggtaattacaatgtttt 35397760  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagt 333  Q
    ||||||||  |||||||||||  ||||||| |||||||||||||    
T  35397761 ccaacccagaagaacctcactacaaagacaatcaaccctaaagt 35397804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 1344456 - 1344343
Alignment:
Q  227 ctaaagaaagctttttgacctttcgaatggtgaaat-ctcacaaaccaagatgattacaatgttttccaacc-caagagaacctcacta--aagacactc 322  Q
    |||||||||| | ||| | ||||| ||||||||||| ||||| | | |||||| ||||||||||| |||||| ||||||||||||||||  |||||||||    
T  1344456 ctaaagaaagttcttttatctttccaatggtgaaattctcactaccgaagatgtttacaatgtttcccaacctcaagagaacctcactacaaagacactc 1344357  T
Q  323 aaccctaaagttac 336  Q
    ||||||||| ||||    
T  1344356 aaccctaaaattac 1344343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 334
Target Start/End: Original strand, 40739033 - 40739130
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||| | ||| |||||||||||||||  | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  40739033 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 40739130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 41586482 - 41586349
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaa-tgttttccaacccaagaga 304  Q
    |||| |||||||||||||||| |||||||| ||||||||   | |   | || ||||||||| | ||||| || |||||| |||||||||||||||||||    
T  41586482 aatggatcctaagagaaaacattaaagaaaactttttgattctcctcctagtaaaatctcactacccaaggtgtttacaactgttttccaacccaagaga 41586383  T
Q  305 acctc--actaaagacactcaaccctaaagttac 336  Q
    | |||  || ||||||||||||||||||||||||    
T  41586382 agctctcaccaaagacactcaaccctaaagttac 41586349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 23078400 - 23078270
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| |||||||| || | ||| |||| ||||||||||| | ||||| || ||||||||||| |||||||||||||      
T  23078400 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatt 23078302  T
Q  307 ctca--ctaaagacactcaaccctaaagttac 336  Q
    ||||    ||||||||||||||| ||||||||    
T  23078301 ctcatcacaaagacactcaacccaaaagttac 23078270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 10445527 - 10445405
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  ||||  ||||||| | |||||||  ||||||||||||||||||| || ||    
T  10445527 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaaattagcttacaatct 10445428  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  10445427 tacacaagaacaagacctaattt 10445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 28770793 - 28770747
Alignment:
Q  134 gatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  28770793 gatacaaagatattacaagaaattagcttaaaagctcacaaagaaca 28770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 34388877 - 34388965
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagctta 163  Q
    ||||||||||||| || | ||||||||||||  ||||||||||  |||| |||||||| | |||||||  |||||||||||||||||||    
T  34388877 ggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctta 34388965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 3491964 - 3492045
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaacccta 329  Q
    ||||||| |||||||| | ||||| || ||||||||||||  ||||||||||||| |||||||  |||||||||||||||||    
T  3491964 aatggtggaatctcactacccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaacccta 3492045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 8040080 - 8040198
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaa--aatgttacaagaaattagcttaaaagctcaca 173  Q
    |||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | ||||||  |  ||||||||||||||||||| ||||| |||    
T  8040080 gtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagcttacaagcttaca 8040179  T
Q  174 -aagaacacgacctcattt 191  Q
     ||||||| ||||| ||||    
T  8040180 caagaacaagacctaattt 8040198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 8390233 - 8390134
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||| ||||| || | ||||||||||||| ||||||||||  |||| |||||||| | || ||||  ||||||||||||||||||| |||||    
T  8390233 agttcggtccaaaatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagct 8390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 25409843 - 25409924
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaacccta 329  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||| ||  |||||||||||||||||    
T  25409843 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaacccta 25409924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 28770706 - 28770573
Alignment:
Q  205 caatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattac-aatgttttccaacccaagag 303  Q
    |||||||||||||||||||||||||||| || |||||| | | |||   |  ||| ||||||| | ||||| || |||| |||||||||||||| ||||     
T  28770706 caatgaatcctaagagaaaacactaaaggaaacttttttatccttcagctaatgagatctcactacccaaggtgtttacaaatgttttccaaccaaagaa 28770607  T
Q  304 aa---cctcactaaagacactcaaccctaaagtt 334  Q
    ||    ||||| ||||||||||||||||||||||    
T  28770606 aaaacactcaccaaagacactcaaccctaaagtt 28770573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 28259260 - 28259169
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagctt 162  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||| ||||||    
T  28259260 agttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaaatagctt 28259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 18674409 - 18674374
Alignment:
Q  145 gttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    ||||||||||||||| ||||||||||||||||||||    
T  18674409 gttacaagaaattagtttaaaagctcacaaagaaca 18674374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 20522234 - 20522333
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | |||||||||||||  | |||||||  |||| |||||||| | |||||||  ||||||||||||||| ||| |||||    
T  20522234 agttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaaattagattataagct 20522333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 723824 - 723877
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  723824 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 723877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 11151790 - 11151856
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  11151790 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 11151856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 11690589 - 11690536
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  11690589 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 11690536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 14633906 - 14633959
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  14633906 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 14633959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 16940287 - 16940193
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||||||||||||||| | ||||||| ||| | || |||||||  |||| |||||||| | |||||||   |||||||||||||||||| |||||    
T  16940287 ggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttataagct 16940193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 17010952 - 17010858
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||||||||||||||| | ||||||| ||| | || |||||||  |||| |||||||| | |||||||   |||||||||||||||||| |||||    
T  17010952 ggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttataagct 17010858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 27139844 - 27139922
Alignment:
Q  99 ggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaag 176  Q
    ||||||||| ||||||||||| |||| ||  | || ||||||||||||||||| |||||||  || |||||||||||||    
T  27139844 ggagagagcagctctccaattcactatgaaaatagtgatacaaaaatgttacaggaaattaaatttaaagctcacaaag 27139922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 39284854 - 39284788
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  39284854 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 39284788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 42269609 - 42269669
Alignment:
Q  280 ttacaatgttttccaaccc--aagagaacctcacta--aagacactcaaccctaaagttac 336  Q
    ||||||||||| |||||||  |||||||||||||||  ||||||||||||| |||||||||    
T  42269609 ttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttac 42269669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 42362321 - 42362255
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  42362321 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 42362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 42362440 - 42362387
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  42362440 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 42362387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 4561176 - 4561143
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagctt 162  Q
    |||| |||||||||||||||||||||||||||||    
T  4561176 aaagagatacaaaaatgttacaagaaattagctt 4561143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Complemental strand, 16388478 - 16388449
Alignment:
Q  145 gttacaagaaattagcttaaaagctcacaa 174  Q
    ||||||||||||||||||||||||||||||    
T  16388478 gttacaagaaattagcttaaaagctcacaa 16388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 17865227 - 17865316
Alignment:
Q  81 aatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||||||| || | |||||||||||||  | |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  17865227 aatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 17865316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 21629983 - 21630056
Alignment:
Q  97 ggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    ||||||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||| ||| |||||    
T  21629983 ggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttataagct 21630056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 27139968 - 27140005
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttg 243  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  27139968 aatgaatcctaatagaaaacaataaagaaagctttttg 27140005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 15903922 - 15903863
Alignment:
Q  120 actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||| |||| ||||||||   |||||||||||| |||||| ||||||||||||||||    
T  15903922 actaagataaaagtgatacaaaggggttacaagaaat-agcttacaagctcacaaagaaca 15903863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 28832409 - 28832555
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  28832409 tcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 28832508  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  28832509 ccaacccaagagaacctcactacaaagacactcaactctaaagttac 28832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 11181916 - 11181631
Alignment:
Q  71 agtttggtccaatatgacatactgt-gggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagc 168  Q
    |||| |||| |||||||| |||| | ||||||||||||  | |||||||  ||||||||||||| ||||||||   |||||||||||||||| |||||||    
T  11181916 agttcggtctaatatgacctactctagggggagagagcaaccctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcctaaaagc 11181817  T
Q  169 tcacaaa-gaacacgacctcattt---------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
    || |||| ||||| ||||| ||||               |||||||||||  ||||||||||||||||||||||| |||| ||||||||||| | ||| |    
T  11181816 tctcaaatgaacaagacctaatttctacccattttcatgtcacccacactcacaatgaatcctaagagaaaacacaaaaggaagctttttgatccttcca 11181717  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||| |||| | ||||| || ||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||    
T  11181716 atggtgaaatttcactacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccataaagttac 11181631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 10281765 - 10282052
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |  | ||||||||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  10281765 agttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagct 10281864  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat--gaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| ||||||| ||||| ||||              |||||||||||  ||||  ||||||||||||||||||| |||||||||||||||| | ||| |    
T  10281865 tacacaagaacaagacctaatttctacccattttgtgtcacccacactcacaatatgaatcctaagagaaaacacaaaagaaagctttttgatccttcca 10281964  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||||| | ||||| || |||||||||||  |||||  |||||||||||||||  ||||||||||||||||||||||||    
T  10281965 atggtgaaatctcactacccaaggtgtttacaatgtttcacaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 10282052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 31300540 - 31300394
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||| |||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  31300540 tcacccacactctcaatgaatcctaagagaaaacacaaaaggaagccttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 31300441  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
     ||||||||||||||||||||  |||||||||||||| |||||||||    
T  31300440 tcaacccaagagaacctcactacaaagacactcaaccttaaagttac 31300394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 336
Target Start/End: Complemental strand, 24553470 - 24553326
Alignment:
Q  194 acccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttcc 293  Q
    ||||||||| | ||||||| |||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||    
T  24553470 acccacactcttaatgaattctaagagaaaacacaaaaggaagctttttgatccttctaatggtgaaatctcactacccaaggtgtttacaatgtttccc 24553371  T
Q  294 aacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||  |||||||||||||||| |||||||    
T  24553370 aacccaagagaacctcactacaaagacactcaacccttaagttac 24553326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 19588897 - 19589043
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||| | |||||||||||||||||||||||| |||| ||| ||||||| | ||| ||||||||||||||||   |||||||| |||||||||||     
T  19588897 tcacccacaatctcaatgaatcctaagagaaaacacaaaaggaagatttttgatccttccaatggtgaaatctcactgcccaagatgtttacaatgtttc 19588996  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  19588997 ccaacccaagagatcctcactacaaagacactcaaccctaaaattac 19589043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 17003889 - 17003759
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| | |||||||||||||    
T  17003889 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttccaaacccaagagaac 17003790  T
Q  307 ctcact--aaagacactcaaccctaaagtta 335  Q
    ||||||  ||||||| |||||||||||||||    
T  17003789 ctcactacaaagacattcaaccctaaagtta 17003759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 336
Target Start/End: Complemental strand, 7160843 - 7160703
Alignment:
Q  198 acactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc 297  Q
    ||||| |||||||||||||||||||||||  |||  ||||||||||| | ||| |||| |||||||||||   ||||| |||||||||||||| |||| |    
T  7160843 acactctcaatgaatcctaagagaaaacataaaatgaagctttttgatccttccaatgatgaaatctcactgtccaaggtgattacaatgtttcccaatc 7160744  T
Q  298 caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  7160743 caagagaacctcactacaaagacactcaaccctaaagttac 7160703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 33031023 - 33030738
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| |||    |||||||||||||||||||||||||    
T  33031023 agttcggtcaaatatgacatactctgggggagagagcagctctccaattcactaagatgaaagtgatgcaatggggttacaagaaattagcttaaaagct 33030924  T
Q  170 cacaaagaacacgacctcattt----------------tcacccacactttcaatgaatcctaagag-----aaaacactaaagaaagctttttgacctt 248  Q
    |||||||||||  || | ||||                |||| |||||| |||||||||||||||||     |||||||||||| ||||||||||   ||    
T  33030923 cacaaagaacaaaacataatttctacccatttttcaagtcactcacactctcaatgaatcctaagagaaattaaaacactaaaggaagctttttg---tt 33030827  T
Q  249 tcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcacta-aagacactcaaccctaaagttac 336  Q
       |||||||||||||||| | |||||||||||||||| |||  |||||||||||||||||  || || | ||||||||||||||||||    
T  33030826 ctcaatggtgaaatctcactacccaagatgattacaatatttctcaacccaagagaacctcgttacaaaatactcaaccctaaagttac 33030738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 11916901 - 11916771
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| ||||||||||||||| |||| ||| ||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  11916901 atgaaccctaagagaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 11916803  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||| ||||||||||||||||||    
T  11916802 ctcactacaaagaaactcaaccctaaagttac 11916771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 14520407 - 14520528
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  14520407 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 14520505  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  14520506 aagacactcaaccctaaagttac 14520528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 42127355 - 42127280
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcac 267  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||    
T  42127355 tcacccacactctcaatgaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcac 42127280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 12084106 - 12083976
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||| ||||||| |||| ||||||||   |||| | ||||||||| |||||| | ||||| || ||| ||||||| ||||||||||||| |    
T  12084106 atgaatcctaagaaaaaacacaaaaggaagcttttat-ccttccaaatggtgaattctcactacccaaggtgtttaaaatgtttaccaacccaagagatc 12084008  T
Q  307 ctcac--taaagacactcaaccctaaagttac 336  Q
    |||||  |||||||||||||||||||||||||    
T  12084007 ctcactataaagacactcaaccctaaagttac 12083976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 9353252 - 9353131
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  9353252 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 9353154  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||| ||||||||||||||    
T  9353153 aagacacttaaccctaaagttac 9353131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 334
Target Start/End: Original strand, 15464711 - 15464830
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || |||| |||||| ||||||||||||| |||||||  |    
T  15464711 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacgatgtttcccaacccaagagatcctcactaca 15464809  T
Q  314 aagacactcaaccctaaagtt 334  Q
    |||||||||||||||||||||    
T  15464810 aagacactcaaccctaaagtt 15464830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 3880467 - 3880600
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagaga 304  Q
    |||||||||| ||||||| || |||| ||||||||||| | ||| |||||||||||||||||| ||||  || |||||||||||  |||||  |||||||    
T  3880467 atgaatcctaggagaaaaaacaaaaggaagctttttgatccttccaatggtgaaatctcacaacccaatgtgtttacaatgtttctcaaccctcaagaga 3880566  T
Q  305 acctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||  || |||||||||| || |||||||    
T  3880567 acctcactacaaggacactcaactctcaagttac 3880600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 6741866 - 6741976
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||| |||||||||||||| ||||||| ||||| ||||||||||  | ||||||| ||| |||||||| | ||||||||||||||||||  || ||    
T  6741866 agttcggttcaatatgacatactctgggggatagagcagctctccaatccattaagatggaagtgatacaaagaagttacaagaaattagcttgcaaact 6741965  T
Q  170 cacaaagaaca 180  Q
    |||||||||||    
T  6741966 cacaaagaaca 6741976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 36932246 - 36932149
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcac--taaagacactcaaccctaaagtt 334  Q
    |||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| | ||||  |||||||||||||||||||||||    
T  36932246 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcatcactataaagacactcaaccctaaagtt 36932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 267
Target Start/End: Original strand, 2630245 - 2630458
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| | || || |||||| ||| ||||| ||||  |||| |||||||| |||||||||  ||||||| |||||||||||||| |     
T  2630245 agttcggtccaatatgacctgctttgagggagatagcagctcttcaatccactatgatgaaagtgatacaaaagggttacaataaattagcttaaaaaca 2630344  T
Q  170 cacaaagaacacgacctcatttt----------------cacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttga-cctttcga 252  Q
    |||||||||||  |||| |||||                ||||| ||||  |||||||||||||||||||||||||||| ||||||||||| |||||| |    
T  2630345 cacaaagaacaaaacctaatttttatacatttttcaagtcaccctcactcacaatgaatcctaagagaaaacactaaaggaagctttttgatcctttc-a 2630443  T
Q  253 atggtgaaatctcac 267  Q
    |||||||||| ||||    
T  2630444 atggtgaaatttcac 2630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 7161041 - 7160872
Alignment:
Q  14 aaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaa-caagtttggtccaatatgacatactgtgggggagagagcggctc 112  Q
    ||||||||||| ||||| ||||||||| ||||| ||| |||| ||| || ||||| | |||||| | ||||||||| |||| | ||||||||| | ||||    
T  7161041 aaagcaacaaa-ataagaaagcaagaaagaaaa-caaacacaccaaaat-ggtaatccagtttgattcaatatgacctactataggggagagatcagctc 7160945  T
Q  113 tccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaacacgac 184  Q
    ||||||  ||| ||||||||| ||||||||   ||||||| ||||||| || ||||||||||||||||| |||    
T  7160944 tccaatccactcagatgaaagtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagac 7160872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 35387876 - 35387962
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatg--ttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| |||||||||||  ||||||||||||||||| |||| ||  ||||||||||||||||| ||||    
T  35387876 aatggtgaaatctcactacccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagtt 35387962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 38219612 - 38219698
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  38219612 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 38219698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 42127268 - 42127169
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||| | ||| |||||||||||||||| | ||||| ||  ||||||||||  ||||||||||||||||||||  ||||| |||||||| |||||||||    
T  42127268 ttttgatccttccaatggtgaaatctcactacccaaggtgtatacaatgtttctcaacccaagagaacctcactacaaagatactcaaccttaaagttac 42127169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 12084258 - 12084137
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||| |||||| || | ||||| ||||||| ||||||||||  |||| |||||||| | |||||| | |||||||||||||| ||||||||||    
T  12084258 agttcggtccactatgacctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaattaacttaaaagct 12084160  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  12084159 tacacaagaacaagacctaattt 12084137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 13488172 - 13488106
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||||||||||||||||||| || |  |||||| |||||||||||||||||    
T  13488172 ccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 13488106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 3880319 - 3880435
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcaca-a 174  Q
    |||||||||||| || | || || ||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||| ||| ||||| ||| |    
T  3880319 gtccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacaca 3880418  T
Q  175 agaacacgacctcattt 191  Q
    |||||| ||||| ||||    
T  3880419 agaacaagacctaattt 3880435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 5611308 - 5611368
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctca 266  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||  |||  ||||||||||    
T  5611308 aatgattcctaagagaaaacactaaagcaagctttttgatcttttcaataatgaaatctca 5611368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 28832278 - 28832365
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagctta 163  Q
    ||||||||||||| || | ||||||||||||| || |||||||  ||||||||||||| | |||||  | |||||||||||||||||||    
T  28832278 ggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaatga-gttacaagaaattagctta 28832365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 5007497 - 5007454
Alignment:
Q  293 caacccaagagaacctcactaaagacactcaaccctaaagttac 336  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||    
T  5007497 caactcaagagaacctcaccaaagatactcaaccctaaagttac 5007454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 11917055 - 11916933
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  ||||  ||||||| | |||||||  ||||||||||| ||| ||  |||||    
T  11917055 agttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaaatagtttgcaagct 11916956  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  11916955 tacacaagaacaagacctaattt 11916933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 13695931 - 13695965
Alignment:
Q  298 caagagaacctcactaaagacactcaaccctaaag 332  Q
    |||||||||||||| ||||||||||||||||||||    
T  13695931 caagagaacctcaccaaagacactcaaccctaaag 13695965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 30899945 - 30899991
Alignment:
Q  134 gatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||| | |||||||||||||||| || ||||||||||||||||    
T  30899945 gatacaaagaggttacaagaaattagcctacaagctcacaaagaaca 30899991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 3075866 - 3075923
Alignment:
Q  280 ttacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  3075866 ttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 3075923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 9353415 - 9353331
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaa 155  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | |||||||||||    
T  9353415 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaa 9353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 31182933 - 31182876
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  31182933 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 31182876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 36932433 - 36932349
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaa 155  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | |||||||||||    
T  36932433 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaa 36932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 39468757 - 39468814
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  39468757 ttacaatgtttcccaacccaagagaactctaatgaaagaccctcaaccctaaagttac 39468814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 8566028 - 8566079
Alignment:
Q  131 agggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  8566028 agggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 8566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 28537575 - 28537615
Alignment:
Q  5 acatcatcaaaagcaacaaagataagcaagcaagaatgaaa 45  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  28537575 acataatcaaaatcaacaaagataagaaagcaagaatgaaa 28537615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 3323625 - 3323479
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  3323625 tcacccacactctcaatgaattctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttc 3323526  T
Q  292 ccaacccaagagaacctcac--taaagacactcaaccctaaagttac 336  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  3323525 ccaacccaagagaacctcactataaagacactcaaccctaaagttac 3323479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 25795795 - 25796080
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| |||||||||| |||||||||||||| | ||| |||  ||||||||||||||||||| |||||    
T  25795795 agttcggtccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaagaaattagcttataagct 25795894  T
Q  170 cacaaa-gaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaat 254  Q
     ||||| ||||| ||||| ||||              ||||||||||| |||||||||||||||||||||||  |||| ||||||||||| | ||| |||    
T  25795895 tacaaaagaacaagacctaatttctacccattttgtgtcacccacactctcaatgaatcctaagagaaaacataaaaggaagctttttgatccttccaat 25795994  T
Q  255 ggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||| | ||||| || ||||| ||||| ||||||  ||||||| |||||||  |||||||||||||||| |||||||    
T  25795995 ggtgaaatctcactacccaaggtgtttacattgtttcccaaccctcaagagagcctcactacaaagacactcaaccctcaagttac 25796080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 24695100 - 24694954
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||| ||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  24695100 tcacccacactctcaatgaatcctaaaagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcaccacccaaggtgtttacaatgtttc 24695001  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  24695000 ccaacccaagagatcctcactacaaagacactcaaccctaaagttac 24694954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 40592701 - 40592570
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  40592701 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 40592602  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  40592601 ctcactacaaagacactcaaccctaaagttac 40592570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 3328291 - 3328146
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||| ||||||||||||||||| |||| ||| ||||||| | ||| |||| ||||||||||| | ||||| || ||||||||||||    
T  3328291 tcacccacactctcaatgtatcctaagagaaaacacaaaaggaagttttttgatccttccaatgctgaaatctcactacccaaggtgtttacaatgtttt 3328192  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    |||||||||||||| ||||||  ||||||| |||||||||||||||    
T  3328191 ccaacccaagagaagctcactacaaagacattcaaccctaaagtta 3328146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 8370559 - 8370277
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | |||||||||||||||||||||||||    
T  8370559 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaattagcttaaaagct 8370461  T
Q  170 caca-aagaacacgacctcattttcaccca-----------cactttca----atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
     ||| ||||||| ||| | ||||  |||||           |||| |||    ||||||||||||||||||||| |||| || ||||| || | ||| ||    
T  8370460 tacacaagaacaagacataatttctacccatttgtgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaaactttt-gatccttccaa 8370362  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | |||||||| ||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  8370361 tggtgaaatctcactacccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttac 8370277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 1417425 - 1417279
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttga-cctttcgaatggtgaaatctcacaaaccaagatgattacaatgttt 290  Q
    |||||||||||  ||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||| | | ||  || |||||||||||    
T  1417425 tcacccacactcccaatgaatcctaagagaaaacacaaaagaaaactttttgatcctttc-aatggtgaaatctcactacctaaagtgtttacaatgttt 1417327  T
Q  291 tccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
     ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  1417326 cccaacccaagataacctcactacaaagacactcaaccctaaagttac 1417279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 3716075 - 3715788
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | | || |||||||| |||||||||| ||||| |||||||| | |||||||  ||||||||||||||||||| || ||    
T  3716075 agttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaact 3715976  T
Q  170 caca-aagaacacgacctcattttcaccca------------cactttca----atgaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| ||||||| ||| | ||||  |||||            ||||||||    ||||||||||||||||||||| |||||||||||||||| | ||| |    
T  3715975 tacacaagaacaagacttaatttctacccattttgtgtcacccactttcacaatatgaatcctaagagaaaacacaaaagaaagctttttgatccttcca 3715876  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  ||||||| ||||||||||||||||    
T  3715875 atggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacattcaaccctaaagttac 3715788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 1736378 - 1736092
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  |||||||||||||| |||| |||||    
T  1736378 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaacttataagct 1736279  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||| ||||| |||||   ||||||||||||||||||| |||  ||||||||||| | |||     
T  1736278 tacacaagaacaagacctaatttctacccattttgtgtcaccaacactctcaataatgaatcctaagagaaaacacaaaaagaagctttttgatccttcc 1736179  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  1736178 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttac 1736092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 25929331 - 25929184
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaa--agctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtt 289  Q
    |||||||||||  ||||||||||||||||||||||| ||| ||  |||||||||| | |||  ||||||||||||||| | ||||| || ||||||||||    
T  25929331 tcacccacactcacaatgaatcctaagagaaaacacaaaaaaagaagctttttgatccttccgatggtgaaatctcactacccaag-tgtttacaatgtt 25929233  T
Q  290 ttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  25929232 ttccaactcaagagaacctcactacaaagacactcaaccctaaagttac 25929184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 26299002 - 26299286
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||| |||||||||||| | ||||||||||||| || ||||||| ||||| |||||||| | |||||||  ||||||||||||||||||| || ||    
T  26299002 agttcggttcaatatgacataatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttataaact 26299101  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaa-gaaagctttttgacctttcgaa 253  Q
     | | ||||||| ||||| ||||              ||||||||| | ||||| |||||||||||||||||| ||| | |||||||||||   ||| ||    
T  26299102 tagacaagaacaagacctaatttctacccattttgtgtcacccacaatctcaattaatcctaagagaaaacacaaaaaggaagctttttgataattccaa 26299201  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||| ||||||||||||||||    
T  26299202 tggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacattcaaccctaaagttac 26299286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 48438228 - 48438513
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  |||||||||||||||| || |||||    
T  48438228 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcatataagct 48438327  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||| ||||||||||| | |||     
T  48438328 tacacaagaacaagacctaatttctacccattttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaaaggaagctttttgatcattcc 48438427  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| |||| |||||||| ||| |||  ||||||||||||||||||||||||    
T  48438428 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaa-ccaagagatccttactacaaagacactcaaccctaaagttac 48438513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 21711237 - 21711520
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| |||||| |||  |||| |||||||| | |||||| | |||||||||||||||||||||||||    
T  21711237 agttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaaga-gttacaagaaattagcttaaaagct 21711335  T
Q  170 caca-aagaacacgacctcattt-------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| |||| || ||||| ||||             | ||||||||| |||||   ||||||||||||||||||| |||| |||||||| || | ||| |    
T  21711336 tacacaagagcaagacctaatttctacccatttgtgttacccacactctcaataatgaatcctaagagaaaacacaaaaggaagctttt-gatccttcca 21711434  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||||| |  |||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  21711435 atggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttac 21711520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 8126782 - 8126928
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||| ||||||||||||| |||  ||||||||||| | ||| |||| ||||||||||| | ||||| || |||||||||||     
T  8126782 tcacccacactctcaatgaatcttaagagaaaacacaaaaagaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttc 8126881  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||| |||||||||  |||||||||||||  |||||||||    
T  8126882 ccaacccaagaaaacctcactacaaagacactcaactgtaaagttac 8126928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 37466447 - 37466593
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    |||||| |||| |||||||||||||| | ||||||| |||| |||||||| || ||||| |||||||||||||||||| ||||  || |||||||||||     
T  37466447 tcacccgcactctcaatgaatcctaaaataaaacacaaaaggaagcttttcgatctttccaatggtgaaatctcacaacccaaagtgtttacaatgtttc 37466546  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||| ||||||||||||||  ||||||||||| | ||||||||||    
T  37466547 ccaacctaagagaacctcactacaaagacactcagctctaaagttac 37466593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 335
Target Start/End: Original strand, 47649737 - 47649869
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagaga 304  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||| ||||||||||||| || | ||||| || ||||||||||| ||||||  |||||||    
T  47649737 atgaatcctaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctaactacccaaggtgtttacaatgtttcccaaccctcaagaga 47649836  T
Q  305 acctcact--aaagacactcaaccctaaagtta 335  Q
    ||||||||  |||||||||||||||||||||||    
T  47649837 acctcactacaaagacactcaaccctaaagtta 47649869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 295
Target Start/End: Complemental strand, 18552956 - 18552716
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  18552956 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 18552857  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaat 254  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||||||||||||||||||||| |||| ||| ||||||| | ||| |||    
T  18552856 tacacaagaacaagacctaatttctacccattttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagttttttgatccttccaat 18552757  T
Q  255 ggtgaaatctcacaaaccaagatgattacaatgttttccaa 295  Q
    ||||||||||||| | ||||| || ||||||||||| ||||    
T  18552756 ggtgaaatctcactacccaaggtgtttacaatgtttcccaa 18552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 47923824 - 47923692
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    ||||||||||| |||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| |||||||||||||     
T  47923824 aatgaatcctacgagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagat 47923725  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
     ||||||  |||||||||||| |||||||||||    
T  47923724 tctcactacaaagacactcaatcctaaagttac 47923692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 36029261 - 36029391
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||||||||||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  36029261 atgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 36029359  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||| ||||    
T  36029360 ctcactacaaagacactcaaccctaaatttac 36029391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 35925646 - 35925776
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||||||||||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||| ||| |    
T  35925646 atgaatcctaagagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatc 35925744  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||| ||||||||||||||||    
T  35925745 ctcactacaaagacattcaaccctaaagttac 35925776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 216 - 334
Target Start/End: Original strand, 27453137 - 27453254
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcactaaa 315  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||| |    
T  27453137 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactaca 27453235  T
Q  316 gacactcaaccctaaagtt 334  Q
    |||||||||||||||||||    
T  27453236 gacactcaaccctaaagtt 27453254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 16264517 - 16264647
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  16264517 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 16264615  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    |||| |  ||||||||||||||||||||||||    
T  16264616 ctcattacaaagacactcaaccctaaagttac 16264647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 27986365 - 27986246
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  27986365 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 27986267  T
Q  314 aagacactcaaccctaaagtt 334  Q
    |||||||||||||||||||||    
T  27986266 aagacactcaaccctaaagtt 27986246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 6794633 - 6794503
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||||| || |||| |||||||| |  | ||| |||||||||||||||| | ||||| || ||||||||||| ||||| |||||||||    
T  6794633 atgaaccctaagagaaaatacaaaaggaagctttt-gttcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagaac 6794535  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  || |||||||||||||||||||||    
T  6794534 ctcactacaatgacactcaaccctaaagttac 6794503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 39032472 - 39032343
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| |||||||||||| |     
T  39032472 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttaccaacccaagag-at 39032375  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  39032374 ctcactacaaagacactcaaccctaaagttac 39032343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 40844802 - 40844953
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaat-----ggtgaaatctcacaaaccaagatgattacaat 286  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||     ||| ||||||||  |  |||| || |||||||    
T  40844802 tcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtcaggtcaaatctcattactcaaggtgtttacaat 40844901  T
Q  287 gttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||  |||||||| ||| |||||||  ||||||||||||||||||||||||    
T  40844902 gtttctcaacccaatagatcctcactacaaagacactcaaccctaaagttac 40844953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 27974861 - 27974740
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| || |||||||||| |||||||  |    
T  27974861 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccgacccaagagatcctcactaca 27974763  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  27974762 aagacactcaaccctaaagttac 27974740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 4386846 - 4386765
Alignment:
Q  257 tgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||| |  |||| |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||    
T  4386846 tgaaatctcactactcaaggtgattacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttac 4386765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 4386988 - 4386890
Alignment:
Q  83 tatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||| |||| ||||||||||||| ||||||||||  | |||||| |||| ||||||||   ||||||||||||||||||||||||||||||||||||    
T  4386988 tatgacctactctgggggagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaaca 4386890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 33386584 - 33386465
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || |||||||||||  |||||||||||| |||||||  |    
T  33386584 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaagagatcctcactaca 33386486  T
Q  314 aagacactcaaccctaaagtt 334  Q
    |||||||||||||||||||||    
T  33386485 aagacactcaaccctaaagtt 33386465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 334
Target Start/End: Original strand, 32143522 - 32143619
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||| | ||| |||||||||||||||| | ||||| || ||||||||||||||||||||||||| | |||||  ||||||||||||||||| ||||    
T  32143522 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcatcactacaaagacactcaaccctagagtt 32143619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 23410537 - 23410593
Alignment:
Q  280 ttacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  23410537 ttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaagtt 23410593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 25929572 - 25929445
Alignment:
Q  14 aaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaa-caagtttggtccaatatgacatactgtgggggagagagcggctc 112  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| ||||| |||||| | |||| ||||||||| ||| |||| |||||| |||||| || |    
T  25929572 aaagcaacaaagataagaaagcaagaaagaaaaacaaacacaccaaga-tggtaacccagttcggtccaatacgacctactctggggg-gagagcagccc 25929475  T
Q  113 tccaat-tactaagatgaaagggatacaaa 141  Q
    ||||||  ||||||||||||| ||||||||    
T  25929474 tccaatccactaagatgaaagtgatacaaa 25929445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 300
Target Start/End: Complemental strand, 30709863 - 30709615
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||  | |||||||  ||||||||||||||||||| |||||    
T  30709863 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaaattagcttataagct 30709764  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| |||| || ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||| ||||| ||||| | |||     
T  30709763 tacacaagagcaagacctaatttctacccatcttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaaaggaagctatttgatcattcc 30709664  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaa 300  Q
    |||| |||||||||||   ||||| || ||||||||||| |||||||||    
T  30709663 aatgatgaaatctcactccccaaggtgtttacaatgtttcccaacccaa 30709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 336
Target Start/End: Original strand, 21353604 - 21353865
Alignment:
Q  99 ggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaacacgacct----------c 187  Q
    |||||||||  |||||||||  ||||||||||||| ||||||||   ||||||||||||||||  || |||||||||||||||| ||||          |    
T  21353604 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaatttctaccc 21353703  T
Q  188 atttt------cacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtga-aatctcacaaaccaagatgat 280  Q
    |||||      ||| ||||||| ||||||||| |||||||||||||||||| || ||||| || | ||| |||||||| | |||||| | ||||  || |    
T  21353704 atttttcatgccactcacacttacaatgaatcttaagagaaaacactaaaggaaacttttggatccttccaatggtgacattctcactacccaaagtgtt 21353803  T
Q  281 tacaatgttttccaacc--caagagaacctcact--aaagacactc--aaccctaaagttac 336  Q
    ||| |||||| ||||||  |||||||||||||||  ||||||||||  ||||||||||||||    
T  21353804 tacgatgtttcccaaccctcaagagaacctcactacaaagacactcaaaaccctaaagttac 21353865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 26928486 - 26928389
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||| | ||| |||||||||||||||  | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  26928486 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 26928389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 37725887 - 37725971
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||| ||||||| || |||||||||| |||||||  ||||||||||||||||||||||    
T  37725887 aatggtgaaatctcactatccaaggtgtttataatgtttccccacccaagagatcctcactacaaagacactcaaccctaaagtt 37725971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 331
Target Start/End: Original strand, 23392108 - 23392170
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaa 331  Q
    ||||| || ||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  23392108 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaa 23392170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 1306162 - 1306248
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||||||||  ||||||||||||| |||||||  ||||||||||||| ||| ||||    
T  1306162 aatggtgaaatctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaactctagagtt 1306248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 36029113 - 36029229
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcaca-a 174  Q
    |||||||||||| || | ||||||||| ||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| || || ||| |    
T  36029113 gtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaacttacaca 36029212  T
Q  175 agaacacgacctcattt 191  Q
    |||||| ||||| ||||    
T  36029213 agaacaagacctaattt 36029229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 27038270 - 27038348
Alignment:
Q  259 aaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    ||||||||| | ||||| || ||||||||||| || |||||||||| |||||||  |||| ||||||||||||||||||    
T  27038270 aaatctcaccacccaaggtgtttacaatgtttccctacccaagagatcctcactacaaaggcactcaaccctaaagtta 27038348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 40592855 - 40592744
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | || |||||||||  ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  40592855 agttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagct 40592756  T
Q  170 caca-aagaaca 180  Q
     ||| |||||||    
T  40592755 tacacaagaaca 40592744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 47923972 - 47923882
Alignment:
Q  78 tccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaag 167  Q
    ||||||||||| || | | ||||||||||| || || |||| ||||| |||||||| | |||||||  |||||||||||||||||||||||    
T  47923972 tccaatatgacctaatctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaagaaattagcttaaaag 47923882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 16264364 - 16264455
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagctt 162  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||| ||||||    
T  16264364 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaaatagctt 16264455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 21156595 - 21156655
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctca 266  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||  |||  ||||||||||    
T  21156595 aatgattcctaagagaaaacactaaagcaagctttttgatcttttcaataatgaaatctca 21156655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 27026925 - 27027004
Alignment:
Q  259 aaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcacta--aagacactcaaccctaaagttac 336  Q
    ||||||||| | ||||| || ||||||||||| || | |||||||| ||||| ||  |||||||||||||||||||||||    
T  27026925 aaatctcactacccaaggtgtttacaatgtttccctatccaagagatcctcagtacaaagacactcaaccctaaagttac 27027004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 180
Target Start/End: Original strand, 25517071 - 25517106
Alignment:
Q  145 gttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||| |||||||||||||||||||||||||||||||    
T  25517071 gttataagaaattagcttaaaagctcacaaagaaca 25517106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 760935 - 760882
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  760935 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 760882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 5236655 - 5236721
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  5236655 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 5236721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 5366347 - 5366293
Alignment:
Q  120 actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaa 174  Q
    |||| |||||||| |||||||| | |||||||||||||| ||||||| |||||||    
T  5366347 actatgatgaaagtgatacaaagaggttacaagaaattatcttaaaatctcacaa 5366293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 5373180 - 5373126
Alignment:
Q  283 caatgttttccaacccaagagaacc-tcactaaagacactcaaccctaaagttac 336  Q
    |||||||| |||||||||||||||| |||| |||||| ||||||| |||||||||    
T  5373180 caatgtttcccaacccaagagaaccttcaccaaagactctcaaccttaaagttac 5373126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 22835082 - 22835135
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  22835082 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 22835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 22835201 - 22835267
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| |||||||||||||| ||||| ||||||||| || |  |||||| |||||||||||||||||    
T  22835201 ccaaggtgattacaatgtttcccaacacaagagaactctaatcaaagaccctcaaccctaaagttac 22835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29100238 - 29100284
Alignment:
Q  134 gatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||| | |||| ||||||||||||||||| |||||||||||||    
T  29100238 gatacaaagaggttataagaaattagcttaaaaactcacaaagaaca 29100284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 39153560 - 39153626
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  39153560 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 39153626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 40844666 - 40844787
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||| ||||||| || ||| |||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  40844666 agttcggtccaatatgacctaatctgggg-agagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 40844764  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  40844765 tacacaagaacaagacctaattt 40844787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 32744634 - 32744691
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  32744634 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 32744691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 40734467 - 40734402
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagtta 335  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| ||||||||||||||||    
T  40734467 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtta 40734402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 53921711 - 53921768
Alignment:
Q  280 ttacaatgttttccaacccaagagaa-cctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||||||||||||||| || ||| |  |||||| |||||||||||||||||    
T  53921711 ttacaatgttttccaacccaagaaaaccctaatcaaagactctcaaccctaaagttac 53921768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 2075156 - 2075188
Alignment:
Q  147 tacaagaaattagcttaaaagctcacaaagaac 179  Q
    ||||| |||||||||||||||||||||||||||    
T  2075156 tacaataaattagcttaaaagctcacaaagaac 2075188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 6794781 - 6794694
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaag-aaattagctt 162  Q
    ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | |||||||| ||||||||||    
T  6794781 ggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaaattagctt 6794694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 31979527 - 31979810
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||||||||||||| | ||||||||||||| || |||||||  ||||||||||||| | | |||||  |||||||||||||| |||| |||||    
T  31979527 agttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaagaaattaacttataagct 31979626  T
Q  170 cacaaa-gaacacgacctcattt---------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
     ||||| ||||| ||||| ||||               ||||||||||| |||||||||||||||||||||||| |||| |||| |||||| | ||| ||    
T  31979627 tacaaaagaacaagacctaatttctacccatttttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagc-ttttgatccttccaa 31979725  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | ||||| || |||||||||||  |||||||| |||||||||||  ||||||||||||||||||||||||    
T  31979726 tggtgaaatctcactacccaaggtgtttacaatgtttctcaacccaaaagaacctcactacaaagacactcaaccctaaagttac 31979810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 31936729 - 31936873
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  31936729 tcacccacactctcaatgaatcctaagagaaaacac-aaagaa-gctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 31936826  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  31936827 ccaacccaatagatcctcactacaaagacactcaaccctaaagttac 31936873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 24435902 - 24435772
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||| ||||||||    
T  24435902 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaactcaagagaa 24435803  T
Q  306 cctcac-taaagacactcaaccctaaagtta 335  Q
    ||||||  |||||||||||||||||||||||    
T  24435802 cctcacacaaagacactcaaccctaaagtta 24435772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 76 - 336
Target Start/End: Complemental strand, 5572319 - 5572042
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcaca- 173  Q
    ||||||||||||| || | | ||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| ||||| |||     
T  5572319 ggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacac 5572220  T
Q  174 aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtga 259  Q
    ||||||| ||||| ||||              ||||||||||| |||||||||||||||||||||||| |||| |||| |||||| | ||| ||| ||||    
T  5572219 aagaacaagacctaatttctacgcattttgtgtcacccacactctcaatgaatcctaagagaaaacacaaaaggaagc-ttttgatcattccaatagtga 5572121  T
Q  260 aatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||| | ||||| || ||||||||||| ||||||||||||| || ||||  |||||||| |||||||||||||||    
T  5572120 aatctcactacccaaggtgtttacaatgtttcccaacccaagagatccccactacaaagacacccaaccctaaagttac 5572042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 336
Target Start/End: Complemental strand, 21801421 - 21801141
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcac-aa 174  Q
    |||||||||||| || | |||||||| |||| ||||||||||  |||||||| |||| | |||||||  |||||||||||||| |||| ||||| || ||    
T  21801421 gtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaa 21801322  T
Q  175 agaacacgacctcattt--------------tcacccacactttc-aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtga 259  Q
    |||||| ||| | ||||              ||||||||||| || |||||| ||||||||||||||| |||| ||||||||||| | ||| |||| |||    
T  21801321 agaacaagacttaatttctacccattttgtgtcacccacactctcaaatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaatgttga 21801222  T
Q  260 aatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  |||||||||||||||| |||||||    
T  21801221 aatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 21801141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 31086404 - 31086273
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||  |||  |||||||| || | ||| |||||||||||||||||| ||||| || |||||||||||  ||||| ||||||     
T  31086404 aatgaatcctaagagaaaacataaaaagaagctttt-gatccttccaatggtgaaatctcacaacccaaggtgtttacaatgtttctcaacctaagagat 31086306  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||  ||||||||||||||||||||||||    
T  31086305 cctcactacaaagacactcaaccctaaagttac 31086273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 31077084 - 31076902
Alignment:
Q  10 atcaaaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaaca-agtttggtccaatatgacatactgtgggggagagagcg 108  Q
    ||||||||||||||| |||||| || ||||||||||  ||| || | |||||||||||||  ||||| |||||||||||| |||| |   ||||| |||     
T  31077084 atcaaaagcaacaaatataagccagaaagaatgaaa--caaacataccaagattggtaacctagtttagtccaatatgacctactctctaggagatagca 31076987  T
Q  109 gctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaacacgacctcatttt 192  Q
    ||||||||||  |||||||| |||| ||||||||   ||||||| |||||||||||| || |||||||||||| ||||| |||||    
T  31076986 gctctccaatccactaagataaaagtgatacaaatgggttacaataaattagcttaagagttcacaaagaacaagacctaatttt 31076902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 14521688 - 14521974
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |||| | | |||||||||  |||||||||| | ||||||||||| ||||||||   ||||||| ||||||||  || ||||    
T  14521688 agttcggtccaatatgacctactctcgaggagagagcacctctccaattcaataagatgaaagtgatacaaatgagttacaa-aaattagcacaagagct 14521786  T
Q  170 cacaaagaacacgacctcattt----------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
    |||||||||||| |||| ||||                ||||||||||| ||||| ||||||||||||||||| ||||| ||| ||||| | | ||| ||    
T  14521787 cacaaagaacacaacctaatttctacacatttttcatgtcacccacactctcaataaatcctaagagaaaacattaaaggaagattttttatccttccaa 14521886  T
Q  254 tggtgaaa-tctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||| |||||| | ||||| || ||||||||||| ||||||  ||||||||||| |||  ||||||| | ||||||||||||||    
T  14521887 tggtgaaattctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctaactacaaagacattaaaccctaaagttac 14521974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 5017404 - 5017296
Alignment:
Q  229 aaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaacc 326  Q
    |||| |||||||| || | ||| |||||||||||||||  | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||    
T  5017404 aaaggaagcttttcgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaacc 5017305  T
Q  327 ctaaagtta 335  Q
    |||||||||    
T  5017304 ctaaagtta 5017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 267
Target Start/End: Complemental strand, 10077243 - 10077038
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcac-a 173  Q
    ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||| ||||||||||||||||||| ||||| || |    
T  10077243 ggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaaaagttacaagaaattagcttataagcttacaa 10077144  T
Q  174 aagaacacgacctcattt--------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtga 259  Q
    ||||||| ||||| ||||              ||||||||||  |||||||||||||||| ||||||| |||| ||||||||||| | ||| |||||| |    
T  10077143 aagaacaagacctaatttctacccattttgtgtcacccacac--tcaatgaatcctaagataaaacacaaaaggaagctttttgatccttccaatggtca 10077046  T
Q  260 aatctcac 267  Q
    ||||||||    
T  10077045 aatctcac 10077038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 335
Target Start/End: Original strand, 22963866 - 22963996
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||| ||||||||| || | ||  ||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| |||| ||||||||     
T  22963866 aatgaatcctaaaagaaaacacaaagggaaa-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagat 22963964  T
Q  306 cctcact--aaagacactcaaccctaaagtta 335  Q
    | |||||  |||||||||||||||||||||||    
T  22963965 cttcactacaaagacactcaaccctaaagtta 22963996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 23824527 - 23824397
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||| ||||||||| || | ||  ||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| |||| ||||||||     
T  23824527 aatgaatcctaaaagaaaacacaaagggaaa-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagat 23824429  T
Q  306 cctcact--aaagacactcaaccctaaagtta 335  Q
    | |||||  |||||||||||||||||||||||    
T  23824428 cttcactacaaagacactcaaccctaaagtta 23824397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 22709208 - 22709306
Alignment:
Q  238 tttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    ||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  22709208 tttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 22709306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 31076866 - 31076736
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    |||||||||||||||||||||||||||||  ||||||| | ||| |||||||||||||||  | | ||| || |||||| ||||  |||||||||  |||    
T  31076866 atgaatcctaagagaaaacactaaagaaatttttttgatcattccaatggtgaaatctcaatacctaaggtgtttacaaagtttctcaacccaaggcaac 31076767  T
Q  307 ctcact--aaagacactcaaccctaaagtta 335  Q
     |||||  ||||||||||||||||| |||||    
T  31076766 gtcactacaaagacactcaaccctatagtta 31076736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 295
Target Start/End: Original strand, 18232864 - 18233101
Alignment:
Q  76 ggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcaca- 173  Q
    ||||||||||||| || | |||||||||||||  | |||||||| |||| |||||||| | |||||||  |||||||||||| |||||| ||||| |||     
T  18232864 ggtccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaagaaatcagcttataagcttacac 18232963  T
Q  174 aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcgaatgg 256  Q
    ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||| |||| |||||| | ||| |||||    
T  18232964 aagaacaagacctaatttctacccattttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaaaggaagc-ttttgatccttccaatgg 18233062  T
Q  257 tgaaatctcacaaaccaagatgattacaatgttttccaa 295  Q
    ||||||||||| | ||||| || ||||||||||| ||||    
T  18233063 tgaaatctcactacccaaggtgtttacaatgtttcccaa 18233101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 5757376 - 5757277
Alignment:
Q  239 ttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| ||| | |  ||||||||||||||||||||||||    
T  5757376 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttac 5757277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 298
Target Start/End: Original strand, 4629974 - 4630211
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcac-aa 174  Q
    |||||||||||| || | | ||| ||||||| ||||||||||  ||||||||||||| | |||||||  |||||||||||||| |||| ||||| || ||    
T  4629974 gtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaatagttacaagaaattaacttataagcttacaaa 4630073  T
Q  175 agaacacgacctcattt--------------tcacccacactttc-aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtga 259  Q
    |||||| ||||| ||||              ||||||| ||| || |||||||||||||||||||||| |||| |||| |||||| | ||| ||||||||    
T  4630074 agaacaagacctaatttctacctattttgtgtcacccaaactctcaaatgaatcctaagagaaaacacaaaaggaagc-ttttgatccttccaatggtga 4630172  T
Q  260 aatctcacaaaccaagatgattacaatgttttccaaccc 298  Q
    |||||||| | ||||  || ||| ||||||| |||||||    
T  4630173 aatctcactacccaatgtgtttaaaatgtttcccaaccc 4630211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 21272846 - 21272788
Alignment:
Q  280 ttacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||    
T  21272846 ttacaatgtttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttac 21272788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 325
Target Start/End: Original strand, 5385765 - 5385881
Alignment:
Q  210 aatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctc 309  Q
    ||||| ||||| ||||||||||||||||||||| | | ||| |||||||||||||||| |   ||| ||||| ||||||||   |||||||  |||||||    
T  5385765 aatcccaagaggaaacactaaagaaagcttttttatccttctaatggtgaaatctcactacttaaggtgattgcaatgtttcttaacccaa-tgaacctc 5385863  T
Q  310 act--aaagacactcaac 325  Q
    |||  |||||||||||||    
T  5385864 actacaaagacactcaac 5385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 24436110 - 24435955
Alignment:
Q  14 aaagcaacaaagataagcaagcaagaatgaaaaacaagcacaacaagattggtaa-caagtttggtccaatatgacatactgtgggggagagagcggctc 112  Q
    ||||||||||||||||| ||||||||| | ||||||| |||| ||||| |||||| | |||| | ||||||||||| |||| | ||||||||||| || |    
T  24436110 aaagcaacaaagataagaaagcaagaaag-aaaacaaacacaccaaga-tggtaacccagttcgatccaatatgacctactctaggggagagagcagccc 24436013  T
Q  113 tccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    ||| ||  |||| |||||||  | ||||||    |||||||||||||||||| |||||    
T  24436012 tccgatccactaggatgaaaatgttacaaatgaattacaagaaattagcttataagct 24435955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 5757561 - 5757470
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagctt 162  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||| ||||||    
T  5757561 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaaatagctt 5757470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 21247119 - 21247076
Alignment:
Q  135 atacaaaaatgttacaagaaattagcttaaaagctcacaaagaa 178  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||    
T  21247119 atacaaaaaggttacaagaaattagcttaaaagatcactaagaa 21247076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 33160551 - 33160618
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    |||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  33160551 accaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactctcaaccctaaagttac 33160618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 33721489 - 33721387
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattac-aatgttttccaacccaagaga 304  Q
    |||||||||||||||||||||||||||  |||||||| | | ||| |||  |||||||||||  || ||| || |||| ||||||| |||||| ||||||    
T  33721489 aatgaatcctaagagaaaacactaaagggagctttttcatcattccaataatgaaatctcac-tacaaaggtgtttacaaatgtttcccaacctaagaga 33721391  T
Q  305 acct 308  Q
    ||||    
T  33721390 acct 33721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 21356249 - 21356310
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcacta 313  Q
    |||| ||||||||||| | ||||| || ||||||||||| | ||||||||||| ||||||||    
T  21356249 aatgatgaaatctcactacccaaggtgtttacaatgtttcctaacccaagagatcctcacta 21356310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 22424905 - 22424960
Alignment:
Q  129 aaagggatacaaaaatg--ttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||| ||||||||||||  |||||||||||||||||||  ||||||||||||||||    
T  22424905 aaagagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 22424960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 28137607 - 28137672
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagtta 335  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| ||||||||||||||||    
T  28137607 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtta 28137672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 31404871 - 31404907
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaac 306  Q
    |||||| || |||||||||||||||||||||||||||    
T  31404871 accaaggtgtttacaatgttttccaacccaagagaac 31404907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 47102784 - 47102638
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    |||| |||||| |||||||||||||||| ||||||| |||||||||||||||| | ||| |||| ||||||||||| | ||||| || |||||||||||     
T  47102784 tcactcacactctcaatgaatcctaagaaaaaacacaaaagaaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaatgtttc 47102685  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  47102684 ccaacccaagagaacctcactacaaagacactcaaccctaaagttac 47102638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 47098770 - 47098624
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||| ||||||| ||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  47098770 tcacccacactctcaatgaaacctaagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 47098671  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  47098670 ccaacccaagagaacctcgctacaaagacactcaaccctaaagttac 47098624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 40816761 - 40816613
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  40816761 tcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 40816662  T
Q  292 ccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  |||||||||||||||  |||||||||||||||| |||||||    
T  40816661 ccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 40816613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 19072942 - 19073228
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  ||||||||||||| | |||||||  ||||||||||||||||||| |||||    
T  19072942 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttataagct 19073041  T
Q  170 cacaaa-gaacacgacctcattt--------------tcacccacactttcaa-tgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
     ||||| |||||  |||| ||||              |||| |||||| |||| |||| ||||||||||||||| |||| ||||||||||| | ||| ||    
T  19073042 tacaaaagaacaatacctaatttctacccattttgtgtcactcacactctcaaatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaa 19073141  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  |||||||||||||||| |||||||    
T  19073142 tggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 19073228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 19120832 - 19121118
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  ||||||||||||| | |||||||  ||||||||||||||||||| |||||    
T  19120832 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttataagct 19120931  T
Q  170 cacaaa-gaacacgacctcattt--------------tcacccacactttcaa-tgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
     ||||| |||||  |||| ||||              |||| |||||| |||| |||| ||||||||||||||| |||| ||||||||||| | ||| ||    
T  19120932 tacaaaagaacaatacctaatttctacccattttgtgtcactcacactctcaaatgaaccctaagagaaaacacaaaaggaagctttttgatccttccaa 19121031  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  |||||||||||||||| |||||||    
T  19121032 tggtgaaatctcactatccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttac 19121118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 13598412 - 13598698
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || || ||||  |||| |||||||| | |||||||  | ||||||||||||||||| |||||    
T  13598412 agttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttataagct 13598511  T
Q  170 caca-aagaacacgac----------ctcatttt----cacccacactttcaatga---atcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| |||          ||||||||    |||||||||| |||||||   ||||||||||||||||| |||| ||||||||||| | |||     
T  13598512 tacacaagaacaagacttaatttctactcattttgtgtcacccacactctcaatgatgaatcctaagagaaaacacaaaaggaagctttttgatccttcc 13598611  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |||||||||||||| |||||||||    
T  13598612 aatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttac 13598698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 32889592 - 32889736
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||| |||||| | ||| |||||||||||||||| | ||||| || |||||||||||     
T  32889592 tcacccacactctcaatgaatcctaagagaaaacacaaaag-aagc-ttttgaaccttccaatggtgaaatctcactacccaaggtgtttacaatgtttc 32889689  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||| | |||||||||  ||||||||||||||||||||||||    
T  32889690 ccaacccaaaaaaacctcactacaaagacactcaaccctaaagttac 32889736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 311
Target Start/End: Complemental strand, 16124599 - 16124340
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  16124599 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 16124500  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              | |||||||||||||||   ||||||||||||||||||| |||| ||||||||||| | |||     
T  16124499 tacataagaacaagacctaatttctacccattttgtgttacccacactttcaataatgaatcctaagagaaaacacaaaaggaagctttttgatccttcc 16124400  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcac 311  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| ||||||    
T  16124399 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcac 16124340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 29651825 - 29652111
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||   ||||||||||||| |||| |||||    
T  29651825 agttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaagaattacaagaaattaacttataagct 29651924  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| |||| || |||||||| | |||     
T  29651925 tacacaagaacaagacctaatttctacccattttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaaaggaaactttttgatccttcc 29652024  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  29652025 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttac 29652111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 9476430 - 9476560
Alignment:
Q  208 tgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacc 307  Q
    |||||| ||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | |||||||| ||||||||||| |||||| |||||||||    
T  9476430 tgaatcttaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctcactacccaagatgtttacaatgtttcccaaccaaagagaacc 9476529  T
Q  308 tcact--aaagacactcaaccctaaagttac 336  Q
    |||||  ||||||| ||||||| ||||||||    
T  9476530 tcactacaaagacattcaacccaaaagttac 9476560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 47704019 - 47703732
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||||   |||||||||||||||||| |||||    
T  47704019 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttacaagct 47703920  T
Q  170 caca-aagaacacgacctcattttcaccca------------cactttca----atgaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| ||||||| ||||| ||||  |||||            |||| |||    ||||||||||||||||||||| |||| ||| ||||| | | ||| |    
T  47703919 tacacaagaacaagacctaatttctacccattttgtgtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagtttttttatcattcca 47703820  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  ||||||||||||||||||||||||    
T  47703819 atggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttac 47703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 336
Target Start/End: Original strand, 22819581 - 22819729
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaa--cactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtt 289  Q
    ||||||||||| |||||||||||||||||||||  ||| |||| ||||||||||| | ||| ||||||||||| | || | ||||| || ||||||||||    
T  22819581 tcacccacactctcaatgaatcctaagagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatgtaactacccaaggtgtttacaatgtt 22819680  T
Q  290 ttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    | |||||||||||||||||||||  ||||||||| || |||||||||||    
T  22819681 tcccaacccaagagaacctcactacaaagacactaaatcctaaagttac 22819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 336
Target Start/End: Complemental strand, 27104481 - 27104201
Alignment:
Q  46 aacaagcacaacaagattggtaaca-agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaa 143  Q
    ||||| |||| |||||||| | ||| |||| |||||||||| || || | ||||||||||||| ||||||||||  |||| |||||||| | |||||||     
T  27104481 aacaaacacaccaagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 27104382  T
Q  144 tgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttg 243  Q
     |||||||||||||||||||      ||||| ||||| ||||| ||||  |||||   |      ||||| ||||||||||||| |||| ||||||||||    
T  27104381 agttacaagaaattagctta------cacaa-gaacaagacctaatttctacccatggt------gaatcttaagagaaaacacaaaaggaagctttttg 27104295  T
Q  244 acctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |   ||| |||||||||||||||| | ||||| || ||| ||||||| |||||||||||| ||||||||  |||||||||||||| |||||||||    
T  27104294 attcttccaatggtgaaatctcactacccaaggtgcttataatgtttcccaacccaagag-acctcactacaaagacactcaaccttaaagttac 27104201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 3281875 - 3282005
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  3281875 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 3281973  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  |||||||||||||| |||||||||    
T  3281974 ctcactacaaagacactcaaccataaagttac 3282005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 21536499 - 21536369
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| |||||||  || | ||| ||||||||||||| || | ||||| || |||||||||||||||||| |||||| |    
T  21536499 atgaaccctaagagaagacacaaaaggaagctttc-gatccttccaatggtgaaatcttactacccaaggtgtttacaatgttttccaacctaagagatc 21536401  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  21536400 ctcactacaaagacactcaaccctaaagttac 21536369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 13604542 - 13604423
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  13604542 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 13604444  T
Q  314 aagacactcaaccctaaagtt 334  Q
    |||| ||||||||||||||||    
T  13604443 aagatactcaaccctaaagtt 13604423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 37069944 - 37070065
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||  | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  37069944 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcattatccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 37070042  T
Q  314 aagacactcaaccctaaagttac 336  Q
    ||||||||||||| |||||||||    
T  37070043 aagacactcaaccataaagttac 37070065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 26644827 - 26644702
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| |||||||| || | ||| |||||||||||||||| |  |||| || ||||||||||| ||||||||| ||| |    
T  26644827 atgaaccctaagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactactcaaggtgtttacaatgtttcccaacccaaaagatc 26644729  T
Q  307 ctcact--aaagacactcaaccctaaa 331  Q
     |||||  |||||||||||||||||||    
T  26644728 ttcactacaaagacactcaaccctaaa 26644702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 9022845 - 9022730
Alignment:
Q  196 ccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaa 295  Q
    |||||||  ||||||||||||||||||||| |  ||| ||||||||| | | ||| |||||||||||||||| |   ||| || |||||||||||  |||    
T  9022845 ccacactcacaatgaatcctaagagaaaactc--aaggaagcttttttatccttccaatggtgaaatctcactacgaaaggtgtttacaatgtttctcaa 9022748  T
Q  296 cccaagagaacctcacta 313  Q
    ||||||||||||||||||    
T  9022747 cccaagagaacctcacta 9022730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 19361315 - 19361230
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt-ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || |||||||||||| ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  19361315 aatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 19361230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 19358726 - 19358641
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt-ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || |||||||||||| ||||||||| ||| |||||||  ||||||||||||||||| ||||    
T  19358726 aatggtgaaatctcactacccaaggtgtttacaatgttttcccaacccaaaagatcctcactacaaagacactcaaccctagagtt 19358641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 35109556 - 35109510
Alignment:
Q  134 gatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||    
T  35109556 gatacaaataggttacaagaaattagcttaaaagctcacaaagaaca 35109510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 19366191 - 19366105
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||| ||||  ||||||||||||| |||||||  ||||||||||||||||| ||||    
T  19366191 aatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagtt 19366105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 24202652 - 24202566
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||| ||||||| | ||||| |||||||||||||||  |||||||||||||  ||| ||  ||||||||||||||||||||||    
T  24202652 aatggtgagatctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagtt 24202566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 22819444 - 22819551
Alignment:
Q  73 tttggtccaatatgacatactgtggggg-agagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctc 170  Q
    |||||||||||||||| |||| |||||| ||||||  || |||||||  || |||||||||| ||||||||   ||||||||||||||||||   |||||    
T  22819444 tttggtccaatatgacctactctggggggagagagtagccctccaatccaccaagatgaaagtgatacaaatgagttacaagaaattagctttttagctc 22819543  T
Q  171 acaaagaa 178  Q
    ||||||||    
T  22819544 acaaagaa 22819551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 4552836 - 4552902
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctc-actaaagacactcaaccctaaagttac 336  Q
    ||||| || |||||||||||  ||||||||||||||||| | ||||||| |||||||||||||||||    
T  4552836 ccaaggtgtttacaatgtttctcaacccaagagaacctcaattaaagaccctcaaccctaaagttac 4552902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 9476275 - 9476397
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | | ||||||||||| ||||||||||  |||| ||||||||   |||||||  |||| |||||||||||||| |||||    
T  9476275 agttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaagagttataagaaattagcttacaagct 9476374  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  9476375 tacacaagaacaagacctaattt 9476397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 3460656 - 3460607
Alignment:
Q  284 aatgttttccaacccaagagaacctcactaaagacactcaaccctaaagt 333  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| |||||||    
T  3460656 aatgctttccaacctaagagaacctcaccaaagacactcaactctaaagt 3460607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 45644554 - 45644619
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaa-cctcactaaagacactcaaccctaaagtta 335  Q
    |||||||| |||||||||||||||||| ||||||| ||| |  |||||| ||||||||||||||||    
T  45644554 ccaagatgtttacaatgttttccaacctaagagaaccctaatcaaagaccctcaaccctaaagtta 45644619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 3189301 - 3189234
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    |||||| || ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  3189301 accaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 3189234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 3198118 - 3198051
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    |||||| || ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  3198118 accaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 3198051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 3206957 - 3206890
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    |||||| || ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  3206957 accaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 3206890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 9023872 - 9023801
Alignment:
Q  120 actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattt 191  Q
    ||||||||||||| ||||||||   | ||||| |||||||| ||||||||||||||||| | ||||| ||||    
T  9023872 actaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcacaaagaataagacctaattt 9023801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 180
Target Start/End: Complemental strand, 47098907 - 47098797
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||||||||||  | | ||||||||||||| || |||||||  ||||||||||||| | |||||  | ||||||||||||||||||| |||||    
T  47098907 agttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaatga-gttacaagaaattagcttataagct 47098809  T
Q  170 cac-aaagaaca 180  Q
     || ||||||||    
T  47098808 tacaaaagaaca 47098797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 197107 - 197173
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  197107 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 834247 - 834300
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  834247 aaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 834300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 834366 - 834432
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  834366 ccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 834432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 3281722 - 3281843
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  || | |||||||| | |||||| | ||||||||||| ||||||  |||||    
T  3281722 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaaga-gttacaagaaaatagcttgcaagct 3281820  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  3281821 tacacaagaacaagacctaattt 3281843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 8550867 - 8550920
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaa--aagctcacaaagaaca 180  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||||||||    
T  8550867 aaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaaca 8550920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 26644980 - 26644859
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  | || |||||||| | |||||| | ||||||||||| ||||||  |||||    
T  26644980 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaaga-gttacaagaaaatagcttgcaagct 26644882  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  26644881 tacacaagaacaagacctaattt 26644859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 17345464 - 17345415
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttt 241  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||| |||||    
T  17345464 tcacccacactcttaatgaatcttaagagaaaacacaaaagaaaactttt 17345415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 40816844 - 40816775
Alignment:
Q  123 aagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcac-aaagaacacgacctcattt 191  Q
    |||||||||| | |||||||  ||||||||||||||||||| ||||| || |||||||| ||||| ||||    
T  40816844 aagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaattt 40816775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 1050532 - 1050594
Alignment:
Q  137 acaaaaatgttacaagaaattagctt--aaaagctcacaaagaacacgacctcattttcaccca 198  Q
    ||||||||||||||||||||||||||  | |||||| | |||||||| |||| |||||||||||    
T  1050532 acaaaaatgttacaagaaattagcttcaataagctctcgaagaacac-acctaattttcaccca 1050594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 32737029 - 32736969
Alignment:
Q  120 actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||| |||||| | |||||||| | ||||||| ||||||||||||||| ||| ||||||||    
T  32737029 actatgatgaaggtgatacaaagaggttacaaaaaattagcttaaaagttcataaagaaca 32736969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 48382509 - 48382457
Alignment:
Q  125 gatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaaga 177  Q
    |||||||| |||||||| | |||||||||||||| |||| ||| |||||||||    
T  48382509 gatgaaagtgatacaaataggttacaagaaattaacttacaagttcacaaaga 48382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 5269131 - 5268999
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| |||||||||||||     
T  5269131 aatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaatgtttcccaacccaagagat 5269032  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||  ||||||||||||||||||||||||    
T  5269031 cctcactacaaagacactcaaccctaaagttac 5268999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 309
Target Start/End: Complemental strand, 39774388 - 39774133
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |||| ||||||| ||||| ||||||||||  ||||| ||||||| |||||||| | |||||||||||||||||||||||||    
T  39774388 agttcggtccaatatgacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaagaaattagcttaaaagct 39774289  T
Q  170 cacaaag-aacacgacctcattt---------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
    ||||||| |||| ||||| ||||               |||| |||||| ||||||||||| ||||||||| || |||| ||||||||||| | ||| ||    
T  39774288 cacaaagaaacaagacctaatttctaccaattttcatgtcactcacactctcaatgaatcccaagagaaaatacaaaaggaagctttttgatcattccaa 39774189  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctc 309  Q
    |||||||| ||||| | ||||| || ||||||||||| ||||| ||||||||||||    
T  39774188 tggtgaaaactcactacccaaggtgtttacaatgtttcccaactcaagagaacctc 39774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 10047393 - 10047679
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  10047393 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 10047492  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||| ||||||| |||| ||| ||||||| | |||     
T  10047493 tacacaagaacaagacctaatttctacccattttgtgtcacccacactctcaataatgaatcctaagacaaaacacaaaaggaagttttttgatccttcc 10047592  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  10047593 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcattacaaagacactcaaccctaaagttac 10047679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 3777716 - 3777847
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    |||||||||||||||||| || |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  3777716 atgaatcctaagagaaaatacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 3777815  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  3777816 ctcactacaaagacactcaaccctaaagttac 3777847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 25861979 - 25861832
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaa-cactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttt 290  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| ||| ||||||| | ||| |||||||||||||||| |  |||| || |||||||||||    
T  25861979 tcacccacactctcaatgaatcctaagagaaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactactcaaggtgtttacaatgttt 25861880  T
Q  291 tccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
     ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  25861879 cccaacccaagagatcctcactacaaagacactcaaccctaaagttac 25861832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 5112251 - 5112535
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||  |||| |||||| |||||| ||||||||||  ||||| ||||||| | ||||||   |||||||||||||||||||||| ||    
T  5112251 agttcggtccaatatgatctactttgggggtgagagcagctctccaatccactaatatgaaagtgttacaaatgggttacaagaaattagcttaaaaact 5112350  T
Q  170 cacaaagaacacgacctcattt----------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaa 253  Q
    || ||| |||  ||||| ||||                |||| ||||||  ||||||||||||||||||||||  |||| ||||||||||| | ||| ||    
T  5112351 cataaaaaacgagacctaatttgtacctattttttaagtcactcacactcacaatgaatcctaagagaaaacataaaaggaagctttttgatccttccaa 5112450  T
Q  254 tggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcac--taaagacactcaaccctaaagttac 336  Q
    |||||||||||||| | ||||| || ||||||||||| ||||||||||||||||||||   |||||||||||| |||||| ||||    
T  5112451 tggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagaacctcacaacaaagacactcaaacctaaaattac 5112535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 24333978 - 24334111
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagaga 304  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||  |||||||    
T  24333978 atgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagaga 24334077  T
Q  305 acctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||  |||||| |||||||||||||||||    
T  24334078 acctcactacaaagactctcaaccctaaagttac 24334111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 3794010 - 3793877
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttga-cctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagag 303  Q
    |||||||||||||| |||||| |||| ||||||||||| |||||| | |||||||||||||| | ||||| || ||||||||||||||||||  ||||||    
T  3794010 atgaatcctaagagcaaacacaaaaggaagctttttgatcctttcta-tggtgaaatctcactacccaaggtgtttacaatgttttccaaccctcaagag 3793912  T
Q  304 aacctcac--taaagacactcaaccctaaagttac 336  Q
    ||||||||  |||||||||||||||||||||||||    
T  3793911 aacctcactataaagacactcaaccctaaagttac 3793877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 16623222 - 16623092
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||| ||||||||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  16623222 atgaatcctaaaagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 16623124  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  16623123 ctcactacaaagacactcaaccctaaagttac 16623092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 16628801 - 16628671
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||| ||||||||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |    
T  16628801 atgaatcctaaaagaaaacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatc 16628703  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||||||||||||||||||    
T  16628702 ctcactacaaagacactcaaccctaaagttac 16628671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 1983383 - 1983099
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| |||| ||||||||| ||| ||||||||||  |||| ||| |||| ||||||||   ||||||||||||||||||  |||||    
T  1983383 agttcggtccaatatgacctactatgggggagatagcagctctccaatccactaggatcaaagtgatacaaaggggttacaagaaattagcttgcaagct 1983284  T
Q  170 cacaaagaacacgacctcattt---------------tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaat 254  Q
    |||||||||||  || | ||||               ||||| ||||| |||||||||||||||||||||| | |||| ||||||||| | | ||| |||    
T  1983283 cacaaagaacaaaacataatttctatcctttttcaagtcacctacactctcaatgaatcctaagagaaaacccaaaaggaagcttttttatccttccaat 1983184  T
Q  255 ggtg-aaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||| |||||| || ||||| | || ||||||||||   |||||||||| |||||||||  ||||||||||||||||||||||||    
T  1983183 ggtgaaaatcttactaaccagggtgtttacaatgttacacaacccaagataacctcactacaaagacactcaaccctaaagttac 1983099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 336
Target Start/End: Complemental strand, 42599519 - 42599374
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    |||||| |||| |||||||||||||||||||||||| |||| ||| ||||| | | ||| |||||||||||||||| | ||||| || ||| |||||||     
T  42599519 tcacccgcactctcaatgaatcctaagagaaaacacaaaaggaagtttttttatccttccaatggtgaaatctcactacccaaggtgtttagaatgtttc 42599420  T
Q  292 ccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||| ||||||||||||||  |||||||||||| |||||||||||    
T  42599419 ccaaccgaagagaacctcactacaaagacactcaa-cctaaagttac 42599374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 38152522 - 38152237
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||||||  |||| | |||||| | |||||||  |||| |||||||||||||| |||||    
T  38152522 agttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaagagttataagaaattagcttataagct 38152423  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              ||||||||||| |||||   ||||||||||||||||||| || | |||||||| || | |||     
T  38152422 tacacaagaacaagacctaatttctaccaattttgtgtcacccacactctcaataatgaatcctaagagaaaacacaaatggaagctttt-gatccttcc 38152324  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcacta--aagacactcaaccctaaagttac 336  Q
    ||||||||| | |||| | ||||| || ||||||| ||| ||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  38152323 aatggtgaattgtcactacccaaggtgtttacaatatttcccatcccaagagatcctcactacaaagacactcaaccctaaagttac 38152237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 18377511 - 18377632
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgtttt 291  Q
    |||||||||||| ||||||||||||||| ||||||| |||  ||||||||||| | ||| |||||| ||||||||  | |||||  | ||||||||||||    
T  18377511 tcacccacacttacaatgaatcctaagaaaaaacacaaaatgaagctttttgatccttccaatggtaaaatctcattacccaaggggtttacaatgtttt 18377610  T
Q  292 ccaacccaagagaacctcacta 313  Q
    ||| ||||||||||||||||||    
T  18377611 ccatcccaagagaacctcacta 18377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 6743345 - 6743214
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||||||||||||||||||| |||| ||| ||||||| | ||| |||||||||||||||  | ||||| || ||||||||||| |||||||||||||     
T  6743345 aatgaatcctaagagaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcattacccaaggtgtttacaatgtttcccaacccaagagat 6743247  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||| ||  |||||||||||| ||| |||||||    
T  6743246 cctcgctacaaagacactcaaacctcaagttac 6743214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 5396591 - 5396473
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| ||||||||||||| ||   ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  5396591 aagagaagacacaaaagaaagctttt-gattcttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 5396493  T
Q  314 aagacactcaaccctaaagt 333  Q
    ||||||||||||||||||||    
T  5396492 aagacactcaaccctaaagt 5396473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 8689425 - 8689295
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||| |||||||||| |||| |||| || ||||| || | ||| |||||||||||||||| | ||||| || ||| ||||||| ||||||||||||| |    
T  8689425 atgaaccctaagagaagacacaaaaggaaactttt-gatccttccaatggtgaaatctcactatccaaggtgtttaaaatgtttcccaacccaagagatc 8689327  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||||||| ||||||||||||||    
T  8689326 ctcactacaaagacactaaaccctaaagttac 8689295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 36315312 - 36315029
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||||||||||| |||||    
T  36315312 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaattagcttagaagct 36315214  T
Q  170 caca-aagaacacgacctcattt-------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| |||| || ||||| ||||             | ||||||||| |||||   |||||||| || ||||||| |||| |||||||| || | ||| |    
T  36315213 tacacaagagcaagacctaatttctacccatttgtgttacccacactctcaataatgaatcctacgaaaaaacacaaaaggaagctttt-gatccttcca 36315115  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||| ||||||||| | ||||  || ||||||||||| ||||||||||||| |||| ||  ||||||||| ||||||||||||||    
T  36315114 atggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttac 36315029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 336
Target Start/End: Complemental strand, 36329521 - 36329238
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||||||||||| |||||    
T  36329521 agttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaattagcttagaagct 36329423  T
Q  170 caca-aagaacacgacctcattt-------------tcacccacactttcaat---gaatcctaagagaaaacactaaagaaagctttttgacctttcga 252  Q
     ||| |||| || ||||| ||||             | ||||||||| |||||   |||||||| || ||||||| |||| |||||||| || | ||| |    
T  36329422 tacacaagagcaagacctaatttctacccatttgtgttacccacactctcaataatgaatcctacgaaaaaacacaaaaggaagctttt-gatccttcca 36329324  T
Q  253 atggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||| ||||||||| | ||||  || ||||||||||| ||||||||||||| |||| ||  ||||||||| ||||||||||||||    
T  36329323 atggttaaatctcactacccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttac 36329238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 54867344 - 54867477
Alignment:
Q  204 tcaatgaatcctaagagaaaacactaaa--gaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaag 301  Q
    |||||||||||||||||||||||| |||  ||||||||||||| | ||| |||||||||||||||| | |||   || ||||||    ||||||||||||    
T  54867344 tcaatgaatcctaagagaaaacacaaaaaagaaagctttttgatccttccaatggtgaaatctcactacccatagtgtttacaa---cttccaacccaag 54867440  T
Q  302 agaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||  ||||||  ||||||||||||||||||||||||    
T  54867441 agattctcactacaaagacactcaaccctaaagttac 54867477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 51337033 - 51336966
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||| || |||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  51337033 ccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaaccctaaagttac 51336966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 5143437 - 5143558
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    |||||||||||| |||| |||||| | || | ||| |||||||||||||||| | | ||| || |||||| |||| |||| |||||||| |||||||  |    
T  5143437 aagagaaaacacaaaaggaagcttat-gatccttccaatggtgaaatctcactacctaaggtgtttacaaagtttcccaatccaagagatcctcactaca 5143535  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  5143536 aagacactcaaccctaaagttac 5143558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 6542380 - 6542447
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  6542380 ccaaggtgtttacaatgtttcccaacccaagagaacctcattacaaagacactcaaccctaaagttac 6542447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 16630763 - 16630664
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| |||||||||||||||| | ||| ||||||| | ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  16630763 agttcggtccaatatgacataatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct 16630664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 18377384 - 18377481
Alignment:
Q  82 atatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaa 178  Q
    ||||||| |||| ||| ||||||||| || ||||| |  ||||||||||||| ||||||||   |||| ||||||| |||||||||||||||||||||    
T  18377384 atatgacctactctggaggagagagcagccctccattccactaagatgaaagtgatacaaatgggttataagaaatcagcttaaaagctcacaaagaa 18377481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 31985553 - 31985434
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | |||  |||||||||| |||| | ||||| || ||||||||||| ||||||||||||| ||||| |  |    
T  31985553 aagagaagacacaaaaggaagctttt-gatccttcccatggtgaaatttcactacccaaggtgtttacaatgtttcccaacccaagagatcctcaataca 31985455  T
Q  314 aagacactcaaccctaaagtt 334  Q
    || ||||||||||||||||||    
T  31985454 aaaacactcaaccctaaagtt 31985434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 5147855 - 5147976
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    |||||||||||| |||| |||||| | || | ||| |||||||||||||||  | ||||  || ||||||||||| ||||| ||||||| ||| |||  |    
T  5147855 aagagaaaacacaaaaggaagcttat-gatccttccaatggtgaaatctcattatccaatgtgtttacaatgtttcccaactcaagagatccttactaca 5147953  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||| ||||||||||||||    
T  5147954 aagacactaaaccctaaagttac 5147976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 24333766 - 24333922
Alignment:
Q  14 aaagcaacaaagataagcaa-gcaagaatgaaaaacaagcacaacaagattggtaaca-agtttggtccaatatgacatactgtgggggagagagcggct 111  Q
    ||||||| |||||||||||| | ||||| ||||  ||| |||| |||||||| ||||  |||| ||||||||||||| || | ||||||||||||| |||    
T  24333766 aaagcaataaagataagcaatgaaagaaagaaa--caaacacaccaagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagct 24333863  T
Q  112 ctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||||||  |||| |||||| | | |||||||  |||| || ||||||||||| |||||    
T  24333864 ctccaatccactatgatgaacgtgttacaaaagagttataaaaaattagcttacaagct 24333922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 37781935 - 37781986
Alignment:
Q  129 aaagggatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||| |||||||| | |||||||||||||||||||||| |||||||||||||    
T  37781935 aaagtgatacaaagaggttacaagaaattagcttaaaaactcacaaagaaca 37781986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 16623376 - 16623254
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||| ||||||||| || | ||| ||||||||| ||||||||||  |||| |||||||| | |||||||  ||||||||||||||||| | |||||    
T  16623376 agttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctaataagct 16623277  T
Q  170 caca-aagaacacgacctcattt 191  Q
     ||| ||||||| ||||| ||||    
T  16623276 tacagaagaacaagacctaattt 16623254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 37782029 - 37782162
Alignment:
Q  206 aatgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattac-aatgttttccaacccaagaga 304  Q
    |||||||| |||||||||||||||||  |  ||||||||   ||| |||  ||||||||||| | ||||| || |||| |||||||||||||||||||||    
T  37782029 aatgaatcttaagagaaaacactaaaagagactttttgattcttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaacccaagaga 37782128  T
Q  305 ac--ctcactaaagacactcaaccctaaagttac 336  Q
     |  ||||| ||||| | ||||| ||||||||||    
T  37782129 gcctctcaccaaagatattcaactctaaagttac 37782162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 3796596 - 3796503
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||||||||||| || | |||||||||||||  ||||| |||  |||| |||||||| | |||||||  ||||||||||||||||||| |||||    
T  3796596 gtccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagct 3796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 4587927 - 4587860
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaacctcact---aaagacactcaaccctaaagtta 335  Q
    ||||| || ||||||||||| |||||||| ||||||||||||   ||||||||| |||||||||||||    
T  4587927 ccaaggtgtttacaatgtttcccaacccatgagaacctcactacaaaagacacttaaccctaaagtta 4587860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 34670610 - 34670561
Alignment:
Q  192 tcacccacactttcaatgaatcctaagagaaaacactaaagaaagctttt 241  Q
    |||| ||||||  ||||||||||||||||||||||||||||||| |||||    
T  34670610 tcactcacactcacaatgaatcctaagagaaaacactaaagaaaactttt 34670561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 5143273 - 5143365
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaa-ttactaagatgaaagggatacaaaaatgttacaagaaattagctt 162  Q
    |||| ||||||||||||| || | ||||||||||||| |||||||||   |||| |||||||| | ||||||||  |||||||||| ||||||    
T  5143273 agttcggtccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaaaatttacaagaaaatagctt 5143365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 28468421 - 28468335
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||| ||||  ||||||||||||| |||||||  ||||||||| ||||||| ||||    
T  28468421 aatggtgaaatctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagtt 28468335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 34495906 - 34495822
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaa 154  Q
    |||| ||||||| ||||| |||| ||||||||||||| || |||||||  ||||||||||||| ||||||||   ||||||||||    
T  34495906 agttcggtccaacatgacttactctgggggagagagcagccctccaatccactaagatgaaagtgatacaaatgggttacaagaa 34495822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 34670682 - 34670638
Alignment:
Q  136 tacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||| | |||||||||||||||||||| |||||||||||||||    
T  34670682 tacaaagaggttacaagaaattagcttaatagctcacaaagaaca 34670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 9927655 - 9927722
Alignment:
Q  270 accaagatgattacaatgttttccaacccaagagaacctcact-aaagacactcaaccctaaagttac 336  Q
    |||||| || ||||||||||| ||||||||||||||| | | | |||||| |||||||||||||||||    
T  9927655 accaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttac 9927722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 5429648 - 5429582
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  5429648 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 5429582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 39246008 - 39246094
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaat 156  Q
    |||| ||||||||||||| || | ||||||||||||| || |||||||  |||| |||||||| | |||||||  ||||||||||||    
T  39246008 agttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat 39246094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 48143011 - 48142945
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  48143011 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 48142945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 52082856 - 52082922
Alignment:
Q  271 ccaagatgattacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||| || ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  52082856 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 52082922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 12739758 - 12739815
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  12739758 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 12739815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 12747964 - 12748021
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  12747964 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 12748021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 54200114 - 54200171
Alignment:
Q  280 ttacaatgttttccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 336  Q
    ||||||||||| ||||||||||||||| || |  |||||| |||||||||||||||||    
T  54200114 ttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 54200171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 6e-34; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 5697 - 5983
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| || || ||||  |||| |||||||| | |||||||  | ||||||||||||||||| |||||    
T  5697 agttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttataagct 5796  T
Q  170 caca-aagaacacgac----------ctcatttt----cacccacactttcaatga---atcctaagagaaaacactaaagaaagctttttgacctttcg 251  Q
     ||| ||||||| |||          ||||||||    |||||||||| |||||||   ||||||||||||||||| |||| ||||||||||| | |||     
T  5797 tacacaagaacaagacttaatttctactcattttgtgtcacccacactctcaatgatgaatcctaagagaaaacacaaaaggaagctttttgatccttcc 5896  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |||||||||||||| |||||||||    
T  5897 aatggtgaaatctcactacccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttac 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 2661 - 2792
Alignment:
Q  207 atgaatcctaagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaac 306  Q
    ||||||||||||| ||||||| |||| ||||||||||| | ||| |||||||||||||||| |  |||| || ||||||||||| ||||||||||||| |    
T  2661 atgaatcctaagataaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacgcaaggtgtttacaatgtttcccaacccaagagatc 2760  T
Q  307 ctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||  ||||| ||| ||||||||||||||    
T  2761 ctcactacaaagaaacttaaccctaaagttac 2792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 133199 - 133080
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  |    
T  133199 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactaca 133101  T
Q  314 aagacactcaaccctaaagtt 334  Q
    |||| ||||||||||||||||    
T  133100 aagaaactcaaccctaaagtt 133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 336
Target Start/End: Original strand, 10743 - 11031
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||| ||||||||||||| || | ||||||||||||| ||||||||||  ||||||||||||| | |||||||  ||||||||||||||| ||| |||||    
T  10743 agttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagtttacaagct 10842  T
Q  170 caca-aagaacacgacctcattt--------------tcacccacact--ttcaatgaatcctaagagaaaacactaaaga-aagctttttgacctttcg 251  Q
     ||| ||||||| ||||| ||||              |||||||| ||  |   ||||||||||||||||||||  ||| | ||||||||||| | |||     
T  10843 tacacaagaacaagacctaatttctatctattttgtgtcacccactctcatgatatgaatcctaagagaaaacagaaaaaagaagctttttgatccttcc 10942  T
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacc--caagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||  |||||||||||||||  |||||||||||||| |||||||||    
T  10943 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccataaagttac 11031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 36752 - 36631
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||  |    
T  36752 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagatcctcactaca 36654  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  36653 aagacactcaaccctaaagttac 36631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 43881 - 43760
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--a 313  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || ||||||||||| ||||||||| ||| |||||||  |    
T  43881 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaaaagatcctcactaca 43783  T
Q  314 aagacactcaaccctaaagttac 336  Q
    |||||||||||||||||||||||    
T  43782 aagacactcaaccctaaagttac 43760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 44044 - 43953
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagctt 162  Q
    |||| ||||||||||||  || | ||||||||||||| ||||||||||  |||| |||||||| | |||||| | ||||||||||| ||||||    
T  44044 agttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaga-gttacaagaaaatagctt 43953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 336
Target Start/End: Original strand, 85850 - 85981
Alignment:
Q  207 atgaatcctaagagaaaa-cactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaa 305  Q
    |||||| ||||||||||| ||| |||| ||| ||||||| | ||| |||||||||||||||| | ||||  || ||||||||||| |||||||||||||     
T  85850 atgaattctaagagaaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaagtgtttacaatgtttcccaacccaagagat 85948  T
Q  306 cctcact--aaagacactcaaccctaaagttac 336  Q
    |||||||  ||||||||||||||||||||||||    
T  85949 cctcactacaaagacactcaaccctaaagttac 85981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 85703 - 85795
Alignment:
Q  77 gtccaatatgacatactgtgggggagagagcggctctccaat-tactaagatgaaagggatacaaaaatgttacaagaaattagcttaaaagct 169  Q
    |||||||||||| || | ||||||||||||||||||||||||  || | |||||||| | |||||| | |||||||||||||||||||||||||    
T  85703 gtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaaga-gttacaagaaattagcttaaaagct 85795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 23696 - 23830
Alignment:
Q  205 caatgaatcctaagagaaaacactaaagaaagc-tttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagag 303  Q
    ||||||||||||||||||||||| |||  | || ||||| | | ||| |||||||| ||||||| | ||||| |||||||||| ||||||||||||| ||    
T  23696 caatgaatcctaagagaaaacacaaaatgatgccttttttatccttctaatggtgacatctcactacccaaggtgattacaattttttccaacccaatag 23795  T
Q  304 aacctcac--taaagacactcaaccctaaagttac 336  Q
    ||||||||  ||||||| ||||||| |||||||||    
T  23796 aacctcactataaagacgctcaaccttaaagttac 23830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 23542 - 23656
Alignment:
Q  71 agtttggtccaatatgacatactgtgggggagagagcggctctccaatt-actaagatgaaagggatacaaaaatg----ttacaagaaattagcttaaa 165  Q
    |||| ||||||||||||| |||| | ||||||| ||  ||| ||||||| ||||||||||||| |||||||| | |    ||||||||||||  |||| |    
T  23542 agttcggtccaatatgacctactttaggggagaaagaagctatccaattcactaagatgaaagtgatacaaataggttaattacaagaaattttcttaga 23641  T
Q  166 agctcacaaagaaca 180  Q
    |||||||||| ||||    
T  23642 agctcacaaaaaaca 23656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 8302 - 8218
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||    
T  8302 aatggtgaaatctcactacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtt 8218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 45375 - 45497
Alignment:
Q  216 aagagaaaacactaaagaaagctttttgacctttcgaatggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--- 312  Q
    ||||||| |||| |||| |||||||| || | ||| |||||||||||||||| | ||||| || |||||||||||  |||||||||||| |||||||       
T  45375 aagagaagacacaaaaggaagctttt-gatccttccaatggtgaaatctcactacccaaggtgtttacaatgtttcacaacccaagagatcctcactaca 45473  T
Q  313 aaagacactcaaccctaaagttac 336  Q
    ||||||| ||||||||||||||||    
T  45474 aaagacattcaaccctaaagttac 45497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 17835 - 17749
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| |||||||||||||||  ||||||||||||| |||| ||  ||||||||||||||||| ||||    
T  17835 aatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtt 17749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 23928 - 23842
Alignment:
Q  252 aatggtgaaatctcacaaaccaagatgattacaatgtttt--ccaacccaagagaacctcact--aaagacactcaaccctaaagtt 334  Q
    |||||||||||||||| | ||||| |||||||||||||||  ||||||||||||| |||| ||  ||||||||||||||||| ||||    
T  23928 aatggtgaaatctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtt 23842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 16006 - 15943
Alignment:
Q  135 atacaaaaatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcaccca 198  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||  |||| |||||| ||||    
T  16006 atacaaagatgttacaagaaattagcttaaaaacccacaaagaacaaaacctaattttccccca 15943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 335
Target Start/End: Complemental strand, 33432 - 33368
Alignment:
Q  273 aagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagtta 335  Q
    |||||| ||| ||||||||||||||||||||| | |||||  ||||||| |||||||||||||||    
T  33432 aagatgtttataatgttttccaacccaagagatcgtcactacaaagacattcaaccctaaagtta 33368  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 14760 - 14805
Alignment:
Q  134 gatacaaaaatgttacaagaaattagcttaaaagctcacaaagaac 179  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||    
T  14760 gatacaaagaggttacgagaaattagcttaaaagctcacaaagaac 14805  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 17466 - 17549
Alignment:
Q  255 ggtgaaatctcacaaaccaagatgattacaatgttttccaacccaagagaacctcact--aaagacactcaaccctaaagttac 336  Q
    ||||||||||||| | ||||| || ||||||||||| |||| |||||||| |  ||||  |||||||||||||| |||||||||    
T  17466 ggtgaaatctcactacccaaggtgtttacaatgtttcccaatccaagagatctccactacaaagacactcaaccgtaaagttac 17549  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 102513 - 102467
Alignment:
Q  134 gatacaaaaatgttacaagaaattagcttaaaagctcacaaagaaca 180  Q
    |||||||| | |||||||||||||| |||||||||||||||| ||||    
T  102513 gatacaaagaggttacaagaaattatcttaaaagctcacaaaaaaca 102467  T

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