View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20160_high_9 (Length: 346)
Name: NF20160_high_9
Description: NF20160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20160_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 36625709 - 36626038
Alignment:
| Q |
1 |
ataatctaactggtgaagtttcaaagactcttgtaagttctctcatgaacttggtttcttttgatgtttcacaaaacaagcttttaggttcatttccaaa |
100 |
Q |
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| T |
36625709 |
ataatctaactggtgaagtttcaaagactcttgtaagttctctcatgaacttggtttcttttgatgtttcacaaaacaagcttttaggttcatttccaaa |
36625808 |
T |
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| Q |
101 |
tggtttatgtaaaggaaaagggcttataaatctaagtcttcatacaaatagattcactggtttaatacctaactcaactagtgaatgtaagagtcttgag |
200 |
Q |
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| T |
36625809 |
tggtttatgtaaaggaaaagggcttataaatctaagtcttcatacaaatagattcactggtttaatacctaactcaactagtgaatgtaagagtcttgag |
36625908 |
T |
|
| Q |
201 |
agattccaagttcagaacaatggtttctctggtgatttcccttttgtgttattttcacttcctaaaattaagctcattagaggtgaaaacaatagattca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36625909 |
agattccaagttcagaacaatggtttctctggtgatttccctattgtgttattttcacttcctaaaattaagctcattagaggtgaaaacaatagattca |
36626008 |
T |
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| Q |
301 |
caggacaaatacctgagtcaatctcagaag |
330 |
Q |
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||||| |||||||||||||||||||||||| |
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| T |
36626009 |
caggaaaaatacctgagtcaatctcagaag |
36626038 |
T |
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