View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20162_high_11 (Length: 373)

Name: NF20162_high_11
Description: NF20162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20162_high_11
NF20162_high_11
[»] chr4 (59 HSPs)
chr4 (68-355)||(11313867-11314144)
chr4 (13-167)||(21802114-21802273)
chr4 (68-164)||(17655603-17655699)
chr4 (13-168)||(53123145-53123303)
chr4 (13-138)||(30563323-30563452)
chr4 (68-168)||(22199432-22199531)
chr4 (68-168)||(37219804-37219904)
chr4 (13-166)||(36073464-36073619)
chr4 (13-168)||(46441958-46442116)
chr4 (68-166)||(33530479-33530576)
chr4 (68-166)||(42671841-42671939)
chr4 (13-167)||(44893007-44893164)
chr4 (13-166)||(44893540-44893696)
chr4 (75-167)||(10442581-10442672)
chr4 (13-168)||(2624951-2625109)
chr4 (13-164)||(9088984-9089138)
chr4 (68-167)||(37934735-37934834)
chr4 (13-168)||(47290180-47290338)
chr4 (13-167)||(50156373-50156529)
chr4 (13-164)||(24128353-24128507)
chr4 (13-168)||(36073061-36073223)
chr4 (13-167)||(7744906-7745063)
chr4 (92-166)||(25063369-25063443)
chr4 (13-168)||(4751560-4751719)
chr4 (73-166)||(36073256-36073349)
chr4 (68-168)||(49387680-49387779)
chr4 (13-168)||(31078612-31078770)
chr4 (19-165)||(44744554-44744698)
chr4 (90-162)||(33530677-33530749)
chr4 (75-164)||(24392854-24392942)
chr4 (90-162)||(10442778-10442850)
chr4 (90-162)||(31078808-31078880)
chr4 (90-162)||(49387877-49387949)
chr4 (90-162)||(2624841-2624913)
chr4 (90-162)||(4751450-4751522)
chr4 (90-162)||(7745101-7745173)
chr4 (13-57)||(10442696-10442740)
chr4 (90-162)||(21802311-21802383)
chr4 (90-162)||(22199265-22199337)
chr4 (94-162)||(24392671-24392739)
chr4 (90-162)||(36072951-36073023)
chr4 (90-162)||(47290070-47290142)
chr4 (90-162)||(50156567-50156639)
chr4 (90-162)||(44893202-44893275)
chr4 (68-156)||(23964269-23964356)
chr4 (90-162)||(24128243-24128315)
chr4 (94-162)||(36073354-36073422)
chr4 (13-57)||(36073650-36073694)
chr4 (90-162)||(44893430-44893502)
chr4 (90-162)||(46441848-46441920)
chr4 (90-149)||(36073732-36073791)
chr4 (90-160)||(42671675-42671745)
chr4 (13-58)||(23964371-23964416)
chr4 (13-58)||(24392781-24392826)
chr4 (13-58)||(49387794-49387839)
chr4 (90-162)||(53123034-53123107)
chr4 (90-138)||(9088898-9088946)
chr4 (90-154)||(23964454-23964518)
chr4 (126-166)||(53998979-53999019)
[»] chr3 (66 HSPs)
chr3 (68-168)||(40328004-40328104)
chr3 (68-164)||(33145885-33145980)
chr3 (72-168)||(36864825-36864921)
chr3 (13-168)||(3456178-3456336)
chr3 (13-166)||(19650695-19650850)
chr3 (68-166)||(47738284-47738382)
chr3 (13-168)||(22426138-22426295)
chr3 (68-166)||(24343722-24343820)
chr3 (68-154)||(33839708-33839794)
chr3 (13-166)||(3574321-3574477)
chr3 (75-168)||(8361832-8361924)
chr3 (13-168)||(33113907-33114066)
chr3 (73-173)||(6042055-6042154)
chr3 (68-164)||(42921298-42921394)
chr3 (13-168)||(3137207-3137365)
chr3 (68-166)||(26612919-26613017)
chr3 (68-173)||(34482676-34482780)
chr3 (68-173)||(37216841-37216945)
chr3 (24-166)||(30385526-30385670)
chr3 (73-169)||(48161084-48161179)
chr3 (75-166)||(9796824-9796914)
chr3 (68-166)||(3089592-3089689)
chr3 (68-165)||(8320378-8320474)
chr3 (94-167)||(41224433-41224505)
chr3 (13-124)||(42297978-42298091)
chr3 (68-166)||(2754892-2754989)
chr3 (68-166)||(37522226-37522323)
chr3 (90-162)||(6041888-6041960)
chr3 (73-165)||(46919072-46919164)
chr3 (13-58)||(30385125-30385170)
chr3 (90-162)||(3137403-3137475)
chr3 (90-162)||(3574516-3574588)
chr3 (68-146)||(41883036-41883114)
chr3 (13-58)||(9796935-9796980)
chr3 (13-58)||(33839645-33839690)
chr3 (90-162)||(42297357-42297430)
chr3 (90-162)||(2754721-2754793)
chr3 (90-162)||(3456068-3456140)
chr3 (90-154)||(9797018-9797082)
chr3 (90-162)||(11347272-11347344)
chr3 (90-154)||(19650889-19650953)
chr3 (90-154)||(22426333-22426397)
chr3 (90-162)||(33113797-33113869)
chr3 (90-154)||(33839543-33839607)
chr3 (94-162)||(37217046-37217114)
chr3 (90-162)||(48160909-48160981)
chr3 (90-136)||(8362034-8362080)
chr3 (13-58)||(2754831-2754876)
chr3 (13-58)||(3089531-3089576)
chr3 (13-58)||(8361951-8361996)
chr3 (13-58)||(24343661-24343706)
chr3 (13-50)||(34482824-34482861)
chr3 (13-58)||(37216959-37217004)
chr3 (13-58)||(37522167-37522212)
chr3 (13-58)||(40327939-40327984)
chr3 (95-160)||(41224239-41224304)
chr3 (13-58)||(41883129-41883174)
chr3 (13-58)||(42297468-42297513)
chr3 (13-58)||(48161019-48161064)
chr3 (90-162)||(24343551-24343623)
chr3 (94-162)||(30385015-30385083)
chr3 (90-162)||(34482899-34482971)
chr3 (90-154)||(37522065-37522129)
chr3 (94-138)||(41883216-41883260)
chr3 (130-166)||(42298086-42298122)
chr3 (90-154)||(47738117-47738181)
[»] chr2 (40 HSPs)
chr2 (68-168)||(22592883-22592985)
chr2 (13-166)||(9293370-9293527)
chr2 (13-162)||(3989190-3989342)
chr2 (13-166)||(23267857-23268013)
chr2 (13-166)||(33380321-33380477)
chr2 (13-166)||(10662001-10662158)
chr2 (13-166)||(7475303-7475459)
chr2 (13-166)||(35160871-35161029)
chr2 (68-168)||(13355021-13355120)
chr2 (13-163)||(31174633-31174785)
chr2 (75-167)||(43331092-43331183)
chr2 (75-166)||(9723586-9723677)
chr2 (68-137)||(16767285-16767354)
chr2 (75-164)||(21393483-21393570)
chr2 (94-162)||(9723409-9723477)
chr2 (90-162)||(14941355-14941427)
chr2 (75-145)||(37335824-37335894)
chr2 (90-162)||(9293565-9293637)
chr2 (68-124)||(14941200-14941256)
chr2 (90-154)||(27847644-27847708)
chr2 (13-58)||(16767378-16767423)
chr2 (90-162)||(7475497-7475569)
chr2 (90-162)||(10661891-10661963)
chr2 (90-162)||(21936085-21936157)
chr2 (90-162)||(23268051-23268123)
chr2 (90-162)||(35160761-35160833)
chr2 (90-162)||(43330916-43330988)
chr2 (68-138)||(21936255-21936325)
chr2 (126-168)||(27847791-27847833)
chr2 (75-124)||(34320993-34321042)
chr2 (90-154)||(31174823-31174887)
chr2 (24-58)||(21936207-21936241)
chr2 (13-58)||(9723519-9723564)
chr2 (13-58)||(21393594-21393639)
chr2 (13-58)||(27847746-27847791)
chr2 (13-58)||(43331026-43331071)
chr2 (90-154)||(13354858-13354922)
chr2 (14-58)||(14941273-14941317)
chr2 (90-162)||(21393677-21393749)
chr2 (90-162)||(33380211-33380283)
[»] chr8 (67 HSPs)
chr8 (68-166)||(30055689-30055786)
chr8 (68-164)||(37132477-37132573)
chr8 (13-164)||(34665496-34665649)
chr8 (13-167)||(37985850-37986006)
chr8 (13-164)||(20091598-20091752)
chr8 (13-166)||(6108028-6108184)
chr8 (69-163)||(3890412-3890506)
chr8 (13-166)||(17841645-17841801)
chr8 (13-164)||(38017048-38017201)
chr8 (13-167)||(26041907-26042064)
chr8 (13-167)||(40779923-40780080)
chr8 (13-168)||(1645757-1645916)
chr8 (13-166)||(25581034-25581190)
chr8 (68-164)||(24211169-24211264)
chr8 (77-173)||(31347564-31347659)
chr8 (68-167)||(15187733-15187831)
chr8 (68-167)||(32064919-32065017)
chr8 (73-167)||(1503637-1503730)
chr8 (68-166)||(10044521-10044618)
chr8 (68-165)||(14129032-14129128)
chr8 (90-167)||(30834849-30834926)
chr8 (13-166)||(42754837-42754993)
chr8 (70-138)||(41819590-41819658)
chr8 (68-166)||(24844655-24844753)
chr8 (13-166)||(3596836-3596992)
chr8 (75-168)||(7022159-7022251)
chr8 (90-162)||(26042105-26042177)
chr8 (90-155)||(39772608-39772672)
chr8 (13-154)||(35353155-35353299)
chr8 (90-162)||(8453838-8453910)
chr8 (90-162)||(27782106-27782178)
chr8 (90-162)||(32064749-32064821)
chr8 (90-162)||(34665386-34665458)
chr8 (13-154)||(32393972-32394114)
chr8 (75-168)||(7017651-7017743)
chr8 (13-58)||(24211459-24211504)
chr8 (90-163)||(24844848-24844920)
chr8 (90-138)||(15972866-15972914)
chr8 (90-162)||(17841839-17841911)
chr8 (90-162)||(20091790-20091862)
chr8 (90-162)||(31347771-31347843)
chr8 (90-162)||(40780118-40780190)
chr8 (90-154)||(42755031-42755095)
chr8 (13-58)||(7017771-7017816)
chr8 (13-124)||(8453948-8454062)
chr8 (89-154)||(38016983-38017048)
chr8 (90-162)||(1645954-1646026)
chr8 (90-138)||(3817919-3817967)
chr8 (90-154)||(7021990-7022054)
chr8 (90-162)||(14128868-14128940)
chr8 (90-162)||(15187564-15187636)
chr8 (94-162)||(24211546-24211614)
chr8 (94-162)||(32393862-32393930)
chr8 (90-162)||(35353045-35353117)
chr8 (90-162)||(37986044-37986116)
chr8 (115-154)||(1886633-1886672)
chr8 (25-58)||(3890523-3890556)
chr8 (13-58)||(7022092-7022137)
chr8 (13-54)||(27782027-27782068)
chr8 (13-58)||(30055631-30055675)
chr8 (13-58)||(32064859-32064904)
chr8 (13-58)||(41819684-41819729)
chr8 (90-138)||(3597030-3597078)
chr8 (90-162)||(7017854-7017926)
chr8 (68-120)||(27835293-27835345)
chr8 (90-142)||(39772790-39772842)
chr8 (90-154)||(41819767-41819831)
[»] chr6 (40 HSPs)
chr6 (13-168)||(17705262-17705416)
chr6 (13-169)||(28675262-28675421)
chr6 (68-168)||(29693618-29693718)
chr6 (13-166)||(17175816-17175972)
chr6 (13-168)||(33696810-33696969)
chr6 (68-171)||(32702378-32702480)
chr6 (68-166)||(2309218-2309315)
chr6 (13-166)||(18365369-18365524)
chr6 (13-166)||(18370633-18370788)
chr6 (75-164)||(11548386-11548474)
chr6 (13-166)||(33695121-33695278)
chr6 (99-165)||(34238883-34238948)
chr6 (68-168)||(23290874-23290973)
chr6 (13-164)||(6031537-6031692)
chr6 (13-58)||(25987044-25987089)
chr6 (90-162)||(17176010-17176082)
chr6 (90-162)||(17705454-17705526)
chr6 (90-162)||(33695316-33695388)
chr6 (90-162)||(33696700-33696772)
chr6 (13-138)||(18889466-18889594)
chr6 (90-162)||(6127279-6127351)
chr6 (90-162)||(23291073-23291145)
chr6 (90-162)||(28675152-28675224)
chr6 (90-160)||(11548577-11548647)
chr6 (13-58)||(9752151-9752196)
chr6 (13-58)||(29693552-29693597)
chr6 (94-162)||(18365566-18365634)
chr6 (94-162)||(18370830-18370898)
chr6 (99-162)||(8515723-8515786)
chr6 (112-166)||(2121004-2121058)
chr6 (90-166)||(582522-582599)
chr6 (13-58)||(2309329-2309374)
chr6 (13-58)||(6127390-6127435)
chr6 (90-139)||(9752234-9752283)
chr6 (13-58)||(23290990-23291035)
chr6 (13-58)||(32702319-32702364)
chr6 (94-162)||(6031734-6031802)
chr6 (68-124)||(6127450-6127506)
chr6 (90-162)||(18889686-18889757)
chr6 (94-162)||(25986934-25987002)
[»] chr1 (43 HSPs)
chr1 (13-168)||(44094812-44094969)
chr1 (13-172)||(36966497-36966659)
chr1 (13-166)||(25463790-25463946)
chr1 (13-166)||(37821629-37821785)
chr1 (23-166)||(25973533-25973677)
chr1 (13-168)||(41876235-41876393)
chr1 (13-168)||(51737619-51737777)
chr1 (68-174)||(44690808-44690914)
chr1 (75-168)||(33786424-33786516)
chr1 (13-165)||(40215102-40215257)
chr1 (75-166)||(32000061-32000151)
chr1 (13-167)||(19015518-19015675)
chr1 (13-168)||(20304923-20305082)
chr1 (68-166)||(3559790-3559887)
chr1 (13-166)||(6883601-6883757)
chr1 (75-164)||(40273888-40273976)
chr1 (68-168)||(18404621-18404720)
chr1 (90-166)||(19722894-19722969)
chr1 (93-165)||(52064373-52064445)
chr1 (68-166)||(9910086-9910183)
chr1 (13-168)||(27523048-27523206)
chr1 (94-163)||(33786628-33786696)
chr1 (90-162)||(40273706-40273778)
chr1 (73-168)||(10167577-10167672)
chr1 (90-162)||(16045787-16045859)
chr1 (90-162)||(32000256-32000328)
chr1 (90-162)||(40214992-40215064)
chr1 (13-58)||(44690935-44690980)
chr1 (90-162)||(6883491-6883563)
chr1 (90-162)||(44094702-44094774)
chr1 (13-56)||(9910201-9910244)
chr1 (13-58)||(40273816-40273861)
chr1 (90-162)||(9910282-9910354)
chr1 (90-162)||(19015408-19015480)
chr1 (90-162)||(25463680-25463752)
chr1 (94-142)||(27523248-27523296)
chr1 (90-162)||(36966697-36966769)
chr1 (90-162)||(37821823-37821895)
chr1 (13-54)||(3559731-3559772)
chr1 (13-58)||(18404556-18404601)
chr1 (94-162)||(3559621-3559689)
chr1 (90-162)||(18404446-18404518)
chr1 (72-124)||(52329452-52329504)
[»] chr7 (42 HSPs)
chr7 (13-167)||(45637826-45637982)
chr7 (13-171)||(3962093-3962253)
chr7 (13-164)||(4974532-4974686)
chr7 (13-167)||(42611925-42612082)
chr7 (68-168)||(15577640-15577739)
chr7 (68-164)||(20009895-20009991)
chr7 (13-166)||(24395086-24395241)
chr7 (68-157)||(29737317-29737406)
chr7 (68-167)||(35445570-35445668)
chr7 (13-167)||(48880721-48880878)
chr7 (68-168)||(15329447-15329546)
chr7 (72-167)||(42696260-42696355)
chr7 (68-166)||(34483011-34483108)
chr7 (75-165)||(37476876-37476965)
chr7 (13-166)||(30848683-30848839)
chr7 (75-167)||(15238564-15238655)
chr7 (90-166)||(25167651-25167726)
chr7 (90-168)||(18037172-18037249)
chr7 (68-166)||(35876417-35876514)
chr7 (90-162)||(15329277-15329349)
chr7 (90-162)||(48880916-48880988)
chr7 (101-166)||(36790271-36790336)
chr7 (90-162)||(4974724-4974796)
chr7 (90-162)||(35444562-35444634)
chr7 (90-162)||(42611815-42611887)
chr7 (90-162)||(45637716-45637788)
chr7 (92-162)||(15577841-15577911)
chr7 (13-58)||(25167756-25167801)
chr7 (94-162)||(3961983-3962051)
chr7 (15-58)||(15577756-15577799)
chr7 (13-55)||(35444672-35444714)
chr7 (13-58)||(34482949-34482993)
chr7 (13-58)||(37476986-37477031)
chr7 (90-162)||(20010087-20010158)
chr7 (90-162)||(34482839-34482911)
chr7 (13-55)||(15238496-15238538)
chr7 (13-55)||(15329387-15329429)
chr7 (13-58)||(18037092-18037137)
chr7 (90-162)||(15238386-15238458)
chr7 (94-154)||(18036990-18037050)
chr7 (94-162)||(36790459-36790527)
chr7 (94-162)||(37477073-37477141)
[»] chr5 (40 HSPs)
chr5 (13-167)||(4892316-4892473)
chr5 (13-166)||(33584124-33584280)
chr5 (13-166)||(38899520-38899677)
chr5 (13-167)||(14138782-14138938)
chr5 (68-167)||(12614531-12614630)
chr5 (75-166)||(22912852-22912942)
chr5 (13-168)||(25398352-25398510)
chr5 (13-165)||(3362892-3363048)
chr5 (68-166)||(8145546-8145643)
chr5 (13-167)||(37321587-37321744)
chr5 (13-166)||(2477750-2477906)
chr5 (13-167)||(3521801-3521957)
chr5 (13-166)||(6043307-6043462)
chr5 (13-163)||(12850915-12851069)
chr5 (90-162)||(12614722-12614794)
chr5 (75-167)||(17545476-17545567)
chr5 (68-166)||(27481995-27482095)
chr5 (13-123)||(4433845-4433958)
chr5 (13-145)||(11360947-11361082)
chr5 (90-162)||(22913043-22913115)
chr5 (13-138)||(31640763-31640891)
chr5 (90-162)||(2477640-2477712)
chr5 (90-162)||(3362782-3362854)
chr5 (90-162)||(6043500-6043572)
chr5 (90-154)||(8145387-8145451)
chr5 (90-162)||(11361120-11361192)
chr5 (90-162)||(38899715-38899787)
chr5 (73-124)||(13664737-13664788)
chr5 (90-162)||(4892206-4892278)
chr5 (90-162)||(12850805-12850877)
chr5 (90-162)||(25398242-25398314)
chr5 (90-138)||(31640929-31640977)
chr5 (13-55)||(17545594-17545636)
chr5 (112-162)||(27481830-27481880)
chr5 (94-162)||(37321786-37321855)
chr5 (90-162)||(4433996-4434068)
chr5 (98-142)||(10458421-10458465)
chr5 (94-154)||(14138680-14138740)
chr5 (90-162)||(17545674-17545746)
chr5 (94-162)||(33584322-33584390)
[»] scaffold0228 (6 HSPs)
scaffold0228 (13-168)||(26050-26208)
scaffold0228 (13-168)||(16098-16256)
scaffold0228 (90-154)||(8414-8478)
scaffold0228 (90-154)||(15996-16060)
scaffold0228 (90-154)||(25948-26012)
scaffold0228 (13-58)||(8516-8561)
[»] scaffold0096 (2 HSPs)
scaffold0096 (13-166)||(41125-41280)
scaffold0096 (90-162)||(41015-41087)
[»] scaffold0085 (2 HSPs)
scaffold0085 (13-166)||(47964-48119)
scaffold0085 (90-162)||(47854-47926)
[»] scaffold0204 (2 HSPs)
scaffold0204 (13-166)||(4510-4666)
scaffold0204 (90-162)||(4400-4472)
[»] scaffold0178 (2 HSPs)
scaffold0178 (13-166)||(11735-11891)
scaffold0178 (90-162)||(11625-11697)
[»] scaffold0471 (2 HSPs)
scaffold0471 (13-164)||(12956-13110)
scaffold0471 (90-162)||(12846-12918)
[»] scaffold0665 (1 HSPs)
scaffold0665 (90-162)||(3072-3144)


Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 68 - 355
Target Start/End: Complemental strand, 11314144 - 11313867
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  168 tcttaatgtgaacaatatcgattttaagaattcattcaacgcctcatnnnnnnnnnnnnnnnnnnnngacaattcaattattagcattaaattggatttt 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||    
T  11314044 tcttaatgtgaacaatatcgattttaagaattcattcaacgcctcat----------aaaaaaaaaagacaattcaattattagcattaaattggatttt 11313955  T
Q  268 ttatgcaaataaggataaatttttagaacactagaaattgaaacatacatattatattgactgatatttacataaattattctagatg 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11313954 ttatgcaaataaggataaatttttagaacactagaaattgaaacatacatattatattgactgatatttacataaattattctagatg 11313867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 21802273 - 21802114
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgg---gtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattat 106  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||||         |   ||| ||||||||| |||||  |||||||||||||||||    
T  21802273 aaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattat 21802174  T
Q  107 tgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  21802173 tgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 17655603 - 17655699
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    |||||||||||||| |||||  ||||||| ||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17655603 aaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 53123145 - 53123303
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| | |||||||||    
T  53123145 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattg 53123244  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  53123245 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 53123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 30563323 - 30563452
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             ||||||||||||||||||||  |||||||| ||||||||||    
T  30563323 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattg 30563422  T
Q  109 tgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||||||| |||||||||||||    
T  30563423 tgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22199432 - 22199531
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  22199432 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 37219804 - 37219904
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||||||||| |  ||||||||| |||||||| || ||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||    
T  37219804 aaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattttcct 37219903  T
Q  168 t 168  Q
    |    
T  37219904 t 37219904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 36073464 - 36073619
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  36073464 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 36073563  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    | ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  36073564 gccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 46441958 - 46442116
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  46441958 aaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 46442057  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  46442058 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 46442116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 33530576 - 33530479
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| |||||||||||||||  ||||||| ||||||||||||| ||||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  33530576 aaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt-tttataaaatcattcttgatatctagcattttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 42671841 - 42671939
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||||| |||| |||||  ||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  42671841 aaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 44893164 - 44893007
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  44893164 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 44893065  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||  || |||||| |||||||||||||| |||||||||||||||||    
T  44893064 tgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 44893540 - 44893696
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  44893540 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 44893639  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  44893640 tgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 10442672 - 10442581
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 2624951 - 2625109
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 2625050  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||  |||||||| ||| ||||||||| |||||||||||||| ||||||| ||||||||||    
T  2625051 tgctatgtcatttttgaatctttctt-ataaaatcattcttgatatctaacattttcctt 2625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 9088984 - 9089138
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| | |||||||||    
T  9088984 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattg 9089083  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  9089084 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 37934834 - 37934735
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||||| ||| |  ||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||| || ||||||||| |||||||||    
T  37934834 aaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 47290180 - 47290338
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             ||||  |||||||| |||||  ||||||| |||||||||||    
T  47290180 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattg 47290279  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    |  ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  47290280 taccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 47290338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 50156529 - 50156373
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||||| ||||||||     
T  50156529 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaagg-tgattatta 50156431  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||||||| || |||||| |||||||||||||| ||||||| |||||||||    
T  50156430 tgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 24128353 - 24128507
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||             |||| ||||||||| |||||  ||||||| ||| |||||||    
T  24128353 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 24128452  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    |||||||||||||||  || |||||| |||||||||||||| ||||||||||||||    
T  24128453 tgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 36073061 - 36073223
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn--------aaaggttaataaataagactataatctaagggtgatt 104  Q
    |||||||||||||||||| |||||||||||||||||||||||||||                 |||| ||||||||| |||||  ||||||| |||| ||    
T  36073061 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggtt 36073160  T
Q  105 attgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    |||||| ||||||||||||| || |||||| ||||||||||| || ||||||||||||||||||    
T  36073161 attgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatctagcattttcctt 36073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 7745063 - 7744906
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||  ||||||||| ||| |  ||||||| |||||||||||    
T  7745063 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattg 7744964  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||  |||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||    
T  7744963 tgcaatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 25063443 - 25063369
Alignment:
Q  92 tctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||| ||||||||| |  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25063443 tctaagagtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 4751560 - 4751719
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    ||||||||||||||| || |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| |||| |||||    
T  4751560 aaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 4751659  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||| ||||||||||||  || |||||| ||||||| |||||| ||||||||||||||||||    
T  4751660 gtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcattttcctt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||  |||||||| || |||||| || ||| ||||||||  ||||||||||||||||||||| ||| |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 49387779 - 49387680
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| || |||||| |||||||||| ||| ||||||| |||||||||    
T  49387779 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatatctaacattttcct 49387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 31078770 - 31078612
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||             |||| ||||||||| ||| |  ||||||| | |||||||||    
T  31078770 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattg 31078671  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || ||| || |||||||||||||| ||||||||||||||||||    
T  31078670 tgccatgtcattcttgaatttttttt-ataaaatcattcttgatatctagcattttcctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 44744554 - 44744698
Alignment:
Q  19 tcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn--aaaggttaataaataagactataatctaagggtgattattgtgtcatgt 116  Q
    |||||||||||| ||||||| |||||||||||||||||||           | ||||||||||||||||||  ||||||||| | ||||||| |||||||    
T  44744554 tcagtctggccggaaatcatagggtggtgggtgttatgtatttttttttgtataggttaataaataagactgaaatctaaggataattattgagtcatgt 44744653  T
Q  117 cattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    |||||||| |    |||||||||||||||| || ||||||| |||||||    
T  44744654 cattcttgaa----tcttgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 33530677 - 33530749
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| || ||||||||||||||| ||||| |||| |||||||    
T  33530677 aatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||| |||||  ||||||||| |||||||||||  |||||||||||  || ||||||||| ||||||||||| ||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 10442778 - 10442850
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  10442778 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 31078808 - 31078880
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  31078808 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 49387877 - 49387949
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  49387877 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 2624913 - 2624841
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  2624913 aatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 4751522 - 4751450
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  4751522 aatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 7745101 - 7745173
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  7745101 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 10442740 - 10442696
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgt 57  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  10442740 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgt 10442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 21802311 - 21802383
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||  ||||| |||| |||||||    
T  21802311 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 22199337 - 22199265
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||| |||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  22199337 aatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 24392739 - 24392671
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||| || |||||||| |||||| ||||| |||| |||||||    
T  24392739 taagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 36073023 - 36072951
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  36073023 aatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 47290142 - 47290070
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  47290142 aatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 50156567 - 50156639
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||| |||||| |||||||||| |||||||    
T  50156567 aatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 44893202 - 44893275
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttg-catctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || |||||||||||||  || ||| |||| |||||| |||||||||| |||||||    
T  44893202 aatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcatt 44893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 23964356 - 23964269
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatct 156  Q
    |||| ||||||||| ||| |  ||||||| | |||||||| || ||||||||||||  ||||||||| |||||||||||||| ||||||    
T  23964356 aaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctt-ataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 24128315 - 24128243
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||| |||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  24128315 aatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 36073422 - 36073354
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  36073422 taagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 36073694 - 36073650
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgt 57  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  36073694 aaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 44893502 - 44893430
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||| |||| |||||| ||||| |||| |||||||    
T  44893502 aatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 46441920 - 46441848
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||| | |||||| ||||| |||| |||||||    
T  46441920 aatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 36073732 - 36073791
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattctt 149  Q
    |||||||  ||||||||| |||||||||||||||  ||||||||| |||||||| |||||    
T  36073732 aatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttctt 36073791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 42671745 - 42671675
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagca 160  Q
    |||||||||||||||||| || ||||||||||||  || ||| ||||||||||| || || |||| |||||    
T  42671745 aatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 23964416 - 23964371
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| ||| |||||||| ||||||||||||||||||    
T  23964416 aaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgta 23964371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 24392781 - 24392826
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| ||||||||||||| |||||||||||||    
T  24392781 aaaatctctgtcgggccggaaatcatggggtgatgggtgttatgta 24392826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 49387839 - 49387794
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| || |||| ||||||||||||||||| |||||||||    
T  49387839 aaaatctcagcctagccggaaatcatggggtggtggatgttatgta 49387794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 53123107 - 53123034
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttc-ttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||| |||| |||||| ||||| |||| |||||||    
T  53123107 aatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 9088946 - 9088898
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||    
T  9088946 aatctaagggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 23964454 - 23964518
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||  |  ||| ||||||||||| ||||| ||||    
T  23964454 aatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 53999019 - 53998979
Alignment:
Q  126 atctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  53999019 atctttcttgataaaatcattcttgatatctaatattttcc 53998979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 40328004 - 40328104
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  40328004 aaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcct 40328103  T
Q  168 t 168  Q
    |    
T  40328104 t 40328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 33145885 - 33145980
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  33145885 aaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 36864921 - 36864825
Alignment:
Q  72 gttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  36864921 gttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcctt 36864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3456178 - 3456336
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| | |||||| ||    
T  3456178 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtg 3456277  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  3456278 tgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 3456336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 19650850 - 19650695
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  19650850 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 19650751  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  19650750 gtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 47738284 - 47738382
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||| |||||  ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  47738284 aaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 22426295 - 22426138
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  |||||||  |||||||||||    
T  22426295 aaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgt 22426196  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    | ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  22426195 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 22426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 24343722 - 24343820
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||||||||||||||||  |||||||||||||||||  | |||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||    
T  24343722 aaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttcc 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 33839708 - 33839794
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33839708 aaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 3574477 - 3574321
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||  |||||||||||    
T  3574477 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattg 3574378  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  3574377 tgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 8361924 - 8361832
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcctt 8361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 33113907 - 33114066
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||              |||| ||||||||| ||| |  ||||||| ||||||||||    
T  33113907 aaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattatt 33114006  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  33114007 gtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 33114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 6042055 - 6042154
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttccttctta 172  Q
    ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||    
T  6042055 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccttatta 6042153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 42921298 - 42921394
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    |||||||||||||| |||||  ||| ||||||||||| ||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  42921298 aaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 3137365 - 3137207
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  3137365 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattg 3137266  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  3137265 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 3137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 26612919 - 26613017
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||| || ||||||| ||||||||    
T  26612919 aaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacattttcc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 34482780 - 34482676
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  34482780 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 34482682  T
Q  168 tcttaa 173  Q
    | ||||    
T  34482681 tattaa 34482676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 37216945 - 37216841
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||  ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  37216945 aaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 37216847  T
Q  168 tcttaa 173  Q
    | ||||    
T  37216846 tattaa 37216841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 30385526 - 30385670
Alignment:
Q  24 ctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgtgtcatgtcatt 120  Q
    ||||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||| |||||||||    
T  30385526 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 30385625  T
Q  121 cttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||||||||||| |||| |||||||||||    
T  30385626 cttgaatctttctt-ataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 48161084 - 48161179
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttccttc 169  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||| |||||| || |||||| |||||||||||||| |||||||||||||||||||    
T  48161084 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt-ataaaatcattcttgatatctagcattttccttc 48161179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||| |||||  |||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 3089592 - 3089689
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||    
T  3089592 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 8320474 - 8320378
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  8320474 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 41224433 - 41224505
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||    
T  41224433 taagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 42297978 - 42298091
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn--aaaggttaataaataagactataatctaagggtgattattgtg 110  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||           |||||||||||||| |||||  |||||||||||| ||||||||    
T  42297978 aaaatctcagtctggccggaaatcatggggtggtagatgttatgtattttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtg 42298077  T
Q  111 tcatgtcattcttg 124  Q
    ||||||||||||||    
T  42298078 tcatgtcattcttg 42298091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 2754892 - 2754989
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||  ||| ||| ||||||||||||| ||||||||||||  ||||||||| ||||||| |||||| ||||||||||||||||    
T  2754892 aaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatgattcttgatatctagcattttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 37522226 - 37522323
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||  ||||||| |||||||||| || ||||||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  37522226 aaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 6041960 - 6041888
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  6041960 aatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 46919072 - 46919164
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    ||||||||||||||   ||||||  |||||||||| || ||||||||| ||| |||||| ||||||||||||||||| ||||||| |||||||    
T  46919072 ttaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 30385125 - 30385170
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  30385125 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 3137403 - 3137475
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  3137403 aatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 3574516 - 3574588
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  3574516 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 41883114 - 41883036
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcatt 146  Q
    ||||||| ||||||||||||  |||| || | |||||||| |  ||||||||||||| ||||||||| |||||||||||    
T  41883114 aaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatt 41883036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 9796980 - 9796935
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||    
T  9796980 aaaatctctgtcgggccgaaaatcatggggtggtgggtcttatgta 9796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 33839645 - 33839690
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||    
T  33839645 aaaatctcaatctggccgtaaatcatggggtggtaggtgttatgta 33839690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 42297430 - 42297357
Alignment:
Q  90 aatctaagggtgattattgt-gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| | ||||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  42297430 aatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 42297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 2754793 - 2754721
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||| |||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  2754793 aatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 3456140 - 3456068
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  3456140 aatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 9797018 - 9797082
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||||| |||||||||| || ||||||||||||| || |||||||| |||||| ||||| ||||    
T  9797018 aatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 11347344 - 11347272
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||||| |||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  11347344 aatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 19650889 - 19650953
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||||| |||||||||| || ||||||||||||  |  ||||||||||||||| ||||||||||    
T  19650889 aatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 22426333 - 22426397
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||| ||  |  ||||||||||||||| ||||||||||    
T  22426333 aatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatat 22426397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 33113869 - 33113797
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||| ||||||| |  |||||| |||||||| ||||| |||| |||||||    
T  33113869 aatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcatt 33113797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 33839607 - 33839543
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||||| |||||||||| |||||||| ||||||  || ||| ||||||||||| ||||||||||    
T  33839607 aatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaatat 33839543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 37217046 - 37217114
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  37217046 taagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 48160981 - 48160909
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  48160981 aatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 48160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 8362034 - 8362080
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttga 136  Q
    |||||||||||||||||| || ||||||||||||| || ||||||||    
T  8362034 aatctaagggtgattattctgccatgtcattcttgaatttttcttga 8362080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 2754831 - 2754876
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| ||| |||||||||||| ||||||||||||||    
T  2754831 aaaatctcagcctgaccggaaatcatggggtagtgggtgttatgta 2754876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 3089531 - 3089576
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||    
T  3089531 aaaatctcagcttggccggaaatcatggggtggtgggtgctatgta 3089576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8361996 - 8361951
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| ||||||||||||||||||||| |||||    
T  8361996 aaaatctctgtcgggccggaaatcatggggtggtgggtgtcatgta 8361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 24343661 - 24343706
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||  ||| ||||||||||| |||||||||||||||||||    
T  24343661 aaaatctcatcctgaccgaaaatcatcgggtggtgggtgttatgta 24343706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 34482861 - 34482824
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggt 50  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  34482861 aaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 37217004 - 37216959
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| || || ||||||||| |||||||||||||||||||    
T  37217004 aaaatctcagccttgctgaaaatcatagggtggtgggtgttatgta 37216959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 37522167 - 37522212
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||  ||||||| |||| ||||||||||||||||||||||    
T  37522167 aaaatctcaacctggccggaaattatggggtggtgggtgttatgta 37522212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 40327939 - 40327984
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||  ||||||| ||||||| |||||||||||||||||||    
T  40327939 aaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 41224304 - 41224239
Alignment:
Q  95 aagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagca 160  Q
    ||||||||| ||| |  ||||||||||||| || |||||||| |||||| |||||||||| |||||    
T  41224304 aagggtgataattctaccatgtcattcttgaatttttcttgagaaaatctttcttaatatatagca 41224239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41883174 - 41883129
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| |||||   |||||||||||||||||||||||||||    
T  41883174 aaaatctcagactggctagaaatcatggggtggtgggtgttatgta 41883129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 42297468 - 42297513
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| ||| ||||||||||||||||| |||||||||    
T  42297468 aaaatctcagcctgaccggaaatcatggggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 48161019 - 48161064
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| || |||| ||| |||||||||||||||||||||||    
T  48161019 aaaatctcagcctagccggaaaccatggggtggtgggtgttatgta 48161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 24343623 - 24343551
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||| ||||||||| || ||| | | | ||| || ||||||||||||||| |||||||||| |||||||    
T  24343623 aatctaagagtgattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcatt 24343551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 30385083 - 30385015
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||| ||| |  ||||||||||||||| ||||| |||  |||||||    
T  30385083 taagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 34482899 - 34482971
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |  ||| ||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  34482899 aatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 37522129 - 37522065
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||| |||||||||||| |||||||||||||||  |  |||||||| |||||| ||||| ||||    
T  37522129 aatcttagggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatat 37522065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 41883216 - 41883260
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||||| || ||||||||||||| || ||||||||||    
T  41883216 taagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 42298086 - 42298122
Alignment:
Q  130 ttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||||||| |||| |||||||||||    
T  42298086 ttcttgataaaatcattcttgatatttagcattttcc 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 47738181 - 47738117
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||||| ||| |||||| || ||| ||||||||| || ||||||||||||||| ||||| ||||    
T  47738181 aatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22592883 - 22592985
Alignment:
Q  68 aaaggttaataaataagact--ataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  22592883 aaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttc 22592982  T
Q  166 ctt 168  Q
    |||    
T  22592983 ctt 22592985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 9293527 - 9293370
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||||||||||||||    
T  9293527 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattatt 9293428  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  9293427 gtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 3989190 - 3989342
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| ||| |||||||    
T  3989190 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattg 3989289  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  3989290 tgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 23268013 - 23267857
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  23268013 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 23267914  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  23267913 tgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 33380321 - 33380477
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnnaa----aggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||         ||    || ||||||||| |||||  ||||||| |||||||||||    
T  33380321 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattg 33380420  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  33380421 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 10662001 - 10662158
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||              |||| ||||||||| |||||  ||||||| ||||||||||    
T  10662001 aaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 10662100  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  10662101 gtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 7475459 - 7475303
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| ||||||||||     
T  7475459 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatta 7475360  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||| ||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  7475359 tgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 35160871 - 35161029
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn------aaaggttaataaataagactataatctaagggtgattat 106  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||               |||| ||||||||| |||||  ||||||| |||||||||    
T  35160871 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 35160970  T
Q  107 tgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  35160971 tgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 13355021 - 13355120
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  |||||||  |||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  13355021 aaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcct 13355119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 31174785 - 31174633
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||         |   ||| ||||||||| ||| |  ||||||| || | |||||||    
T  31174785 aaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgt 31174686  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattt 163  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  31174685 gtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||||| |||||  ||||||| ||||||||||||  ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||  ||||||| |||||||||| |||||||||||||||  || ||||||||| ||||||||||| ||||||| ||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 16767354 - 16767285
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgat 137  Q
    |||||||||||||| |||||  |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  16767354 aaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||| |||||  ||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 9723477 - 9723409
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||||||| |||||||||| |||||||    
T  9723477 taagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 14941355 - 14941427
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| ||||||||| |||||||| ||||| |||| |||||||    
T  14941355 aatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcat 145  Q
    ||||||| |||||  |||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 9293565 - 9293637
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  9293565 aatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 14941256 - 14941200
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttg 124  Q
    |||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||    
T  14941256 aaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttg 14941200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 27847708 - 27847644
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||| |||||||| ||||| ||||    
T  27847708 aatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 16767423 - 16767378
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  16767423 aaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 7475497 - 7475569
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| | |||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  7475497 aatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 10661963 - 10661891
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  10661963 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 21936157 - 21936085
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  21936157 aatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 23268051 - 23268123
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  23268051 aatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 35160833 - 35160761
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  35160833 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 43330988 - 43330916
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| || ||| |||| |||||| ||||| |||| |||||||    
T  43330988 aatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 21936255 - 21936325
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||| ||||||||| | |||  ||||||| ||||||||||||| ||||||||||||| ||| |||||||||    
T  21936255 aaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 27847791 - 27847833
Alignment:
Q  126 atctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttcctt 27847833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 34321042 - 34320993
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttg 124  Q
    ||||||| |||||  ||||||||||||||||||||| |||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttg 34320993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 31174823 - 31174887
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||| |  |||||| |||||||| ||||| ||||    
T  31174823 aatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 21936207 - 21936241
Alignment:
Q  24 ctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  21936207 ctggccggaaatcatggggtggtgggtgttatgta 21936241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 9723519 - 9723564
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||  ||| |||||||||||||||||||||||||||    
T  9723519 aaaatctcagcctcaccggaaatcatggggtggtgggtgttatgta 9723564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 21393639 - 21393594
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||  ||| ||||| |||||||||||||||||||||||||||    
T  21393639 aaaatctatgtcgggccggaaatcatggggtggtgggtgttatgta 21393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27847746 - 27847791
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| ||  |||||||||||||||||||||||||||    
T  27847746 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 43331026 - 43331071
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||| || ||| ||||| |||||||||||||||||||||||||||    
T  43331026 aaaatttctgtcgggccggaaatcatggggtggtgggtgttatgta 43331071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 13354922 - 13354858
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||||||||| |||||| || ||| ||||||||| |  ||||||||||||||| ||||| ||||    
T  13354922 aatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 14941317 - 14941273
Alignment:
Q  14 aaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||    
T  14941317 aaatctcagcctggccagaaatcatgaggtggtgggtgttatgta 14941273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 21393677 - 21393749
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |  ||||||||||||  || |||||||| |||||  ||||| |||| |||||||    
T  21393677 aatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 33380283 - 33380211
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||||||||||||  | ||||||||||||  |  |||||||| |||||| ||||| |||| |||||||    
T  33380283 aatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 7e-37; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 30055689 - 30055786
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30055689 aaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 37132573 - 37132477
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  37132573 aaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 34665496 - 34665649
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||         |   ||||||||||||| |||||  ||||||||||||||||||||    
T  34665496 aaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgt 34665595  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    | ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  34665596 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 37986006 - 37985850
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||         |   ||| |||||||||  ||||  ||||||| ||||||||||||    
T  37986006 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgt 37985907  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    | ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  37985906 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 20091752 - 20091598
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| || |||| |||||||||||||||||||||||||||             |||||||||||||| |||||  |||||||||||||||||||    
T  20091752 aaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 20091653  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    || ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  20091652 tgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 6108184 - 6108028
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  6108184 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 6108085  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  6108084 tgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 3890506 - 3890412
Alignment:
Q  69 aaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattt 163  Q
    ||||||||||||||||| || ||||||| |||||||||| || ||| ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  3890506 aaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 17841801 - 17841645
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  17841801 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 17841702  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  17841701 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 38017048 - 38017201
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn--aaaggttaataaataagactataatctaagggtga-ttattgt 109  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||           |||| ||||||||| |||||  ||||||| ||| | |||||||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttgaaagattaataaatgagactgaaatctaaaggtaaattattgt 38017147  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  38017148 gtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 26042064 - 26041907
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  26042064 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 26041965  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  26041964 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 40780080 - 40779923
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  40780080 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 40779981  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  40779980 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 1645916 - 1645757
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||| |||| || |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| ||||||||||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 1645817  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||| |||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||    
T  1645816 gtgccatgtcattcttggttctttctt-ataaaatcattcttgatatctagcattttcctt 1645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 25581190 - 25581034
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  25581190 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 25581091  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||| |||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  25581090 tgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 24211264 - 24211169
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  24211264 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 173
Target Start/End: Complemental strand, 31347659 - 31347564
Alignment:
Q  77 taaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttccttcttaa 173  Q
    ||||| |||||  ||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcctttttaa 31347564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 15187733 - 15187831
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| |||||||||||||  |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  15187733 aaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 32064919 - 32065017
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||||||||||||||||  || |||||| |||||||||||||| |||||||||||||||||    
T  32064919 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 1503730 - 1503637
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 10044521 - 10044618
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| ||| |  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  10044521 aaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 14129032 - 14129128
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| || |||||| |||||||||||||| |||||||||||||||    
T  14129032 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 30834926 - 30834849
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||| ||||| |||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||    
T  30834926 aatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 42754993 - 42754837
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  42754993 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 42754894  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |  ||||||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  42754893 taccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 41819658 - 41819590
Alignment:
Q  70 aggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41819658 aggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 24844753 - 24844655
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||| ||||| || |||||||| ||||||||| || |||| |||||||  ||||||||||||||||||||| || ||||||| ||||||||    
T  24844753 aaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 3596992 - 3596836
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  3596992 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 3596893  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||| ||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  3596892 tgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 7022159 - 7022251
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||| |||||  |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||||| || ||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgat-aaatcattgttgatatctagcattttcctt 7022251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 26042105 - 26042177
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  26042105 aatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 39772672 - 39772608
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatc 155  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  39772672 aatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 35353155 - 35353299
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||             |||| ||||||||| ||| || ||| ||| |||||||||||    
T  35353155 aaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattg 35353254  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||    
T  35353255 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 8453910 - 8453838
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  8453910 aatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 27782106 - 27782178
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||| ||| |||||||||||||||||  ||||| |||| |||||||    
T  27782106 aatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 32064821 - 32064749
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  32064821 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 34665458 - 34665386
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  34665458 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 32393972 - 32394114
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta---nnnnnnnnnaaaggttaataaataagactataatctaagggtgattattgt 109  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||            |||| ||||||||| |||||  ||||||| ||||||||||||    
T  32393972 aaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 32394071  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    | ||||||||||||  || ||| || |||||||||||||| ||||    
T  32394072 g-catgtcattcttaaatattt-tttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 7017743 - 7017651
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||| |||||  ||||||||| |||||||| |   |||||||||||  || |||||||||||| |||||||| ||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaa-tcattcttgatatctagcattttcctt 7017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 24211504 - 24211459
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  24211504 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 24844848 - 24844920
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattt 163  Q
    |||||||||||||||||| |||||||||||||||| || |||||| |||||||  ||||| |||| ||||||||    
T  24844848 aatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 15972866 - 15972914
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||    
T  15972866 aatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 17841839 - 17841911
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  17841839 aatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 20091790 - 20091862
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||  ||||| |||| |||||||    
T  20091790 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 31347771 - 31347843
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| || |||||||| |||||  ||||| |||| |||||||    
T  31347771 aatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 40780118 - 40780190
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  40780118 aatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 42755031 - 42755095
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| ||||    
T  42755031 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 7017816 - 7017771
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  7017816 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 8453948 - 8454062
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| ||||||| |||| |||| |||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8454047  T
Q  110 gtcatgtcattcttg 124  Q
    | |||||||||||||    
T  8454048 gccatgtcattcttg 8454062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 38017048 - 38016983
Alignment:
Q  89 taatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    ||||| ||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| ||||    
T  38017048 taatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 1645954 - 1646026
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || |||||| |||||  |  ||||||||||||||| ||||| |||| |||||||    
T  1645954 aatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcatt 1646026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 3817919 - 3817967
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||||||||| |||||||| ||||||| || ||||||||||    
T  3817919 aatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 7022054 - 7021990
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||| ||||||||| || |||||||| |||||| ||||| ||||    
T  7022054 aatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 14128940 - 14128868
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||| ||||||||||| ||||| |||| |||||||    
T  14128940 aatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 15187636 - 15187564
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||||| |||||| || ||| ||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  15187636 aatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 24211546 - 24211614
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  24211546 taagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcatt 24211614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 32393930 - 32393862
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  32393930 taagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 35353117 - 35353045
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||| |||||| ||||| |||| |||||||    
T  35353117 aatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 37986044 - 37986116
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||| ||||||||||| ||||| |||| |||||||    
T  37986044 aatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 1886633 - 1886672
Alignment:
Q  115 gtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 3890556 - 3890523
Alignment:
Q  25 tggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||||||||||||||||||    
T  3890556 tggctgaaaatcatggggtggtgggtgttatgta 3890523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 7022092 - 7022137
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||  ||| ||||| |||||||||||||||||||||||||||    
T  7022092 aaaatctatgtcgggccggaaatcatggggtggtgggtgttatgta 7022137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 27782068 - 27782027
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgtta 54  Q
    ||||||| |||||||||| ||||||| |||||||||||||||    
T  27782068 aaaatcttagtctggccggaaatcattgggtggtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 30055631 - 30055675
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||    
T  30055631 aaaatctcag-ctggccggaaatcatggggtggtggatgttatgta 30055675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 32064859 - 32064904
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| |||||||||| || |||||||||||||    
T  32064859 aaaatctcagcctggccggaaatcatgggctgatgggtgttatgta 32064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41819729 - 41819684
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| | ||||| |||||||||||||||| ||||||||||    
T  41819729 aaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 3597030 - 3597078
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    ||||||||||| |||||| || ||||||||||||| | |||||||||||    
T  3597030 aatctaagggtaattattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 7017854 - 7017926
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||| |||||||| || ||||||||||||| || |||||| | |||||| ||| | |||| |||||||    
T  7017854 aatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 27835345 - 27835293
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcatt 120  Q
    |||||||||||||| ||| |  ||||||||| ||||||||||||||| |||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatt 27835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 39772790 - 39772842
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaat 142  Q
    |||||||||||||||||| || ||||||||||||| |  ||| ||||||||||    
T  39772790 aatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaat 39772842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 41819767 - 41819831
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||| ||||||||  | | |||||||||||||| ||||| ||||    
T  41819767 aatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatat 41819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 17705416 - 17705262
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-aaaggttaataaataagactataatctaagggtgattattgtgt 111  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||          |||||||||||||| |||||  ||||||||| ||||||||||||    
T  17705416 aaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaattttttatgaaaggttaataaatgagactgaaatctaagg-tgattattgtgt 17705318  T
Q  112 catgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  17705317 catgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 17705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 28675262 - 28675421
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||||             |||||||||||||| |||||  |||||||||||||||||||    
T  28675262 aaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattg 28675361  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttccttc 169  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  28675362 tgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttc 28675421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 29693618 - 29693718
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||| ||||||||||||||  ||||||||||| |||||| || ||||||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  29693618 aaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttcct 29693717  T
Q  168 t 168  Q
    |    
T  29693718 t 29693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 17175972 - 17175816
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  17175972 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 17175873  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |  ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  17175872 taccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 33696810 - 33696969
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| ||||||||||    
T  33696810 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 33696909  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||| ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||    
T  33696910 gtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcctt 33696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 32702378 - 32702480
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||| ||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  32702378 aaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 32702476  T
Q  168 tctt 171  Q
    ||||    
T  32702477 tctt 32702480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 2309315 - 2309218
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||  || ||||||||||||||||    
T  2309315 aaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 18365524 - 18365369
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  18365524 aaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18365425  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |  |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  18365424 gctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 18370788 - 18370633
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  18370788 aaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18370689  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |  |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  18370688 gctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 33695278 - 33695121
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| ||||||||||    
T  33695278 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 33695179  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||| ||| ||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  33695178 gtgacatatcattcttaaatatttctt-ataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  99 gtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatctt-cttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 23290973 - 23290874
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||| ||||||||| ||| ||||||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  23290973 aaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 6031692 - 6031537
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| ||||||||||    
T  6031692 aaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 6031593  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||| ||||||||||||  |||||| || |||||||||||||| ||||| || |||||    
T  6031592 gtgccatgtcattcttaaatcttt-tttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 25987044 - 25987089
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25987044 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 17176010 - 17176082
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  17176010 aatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 17705454 - 17705526
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  17705454 aatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 33695316 - 33695388
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  33695316 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 33696772 - 33696700
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  33696772 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 18889594 - 18889466
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| || |||| ||||||||||||||||||| |||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  18889594 aaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18889495  T
Q  110 gtcatgtcattcttgcatctttcttgata 138  Q
    | ||||||||||||| ||| |||||||||    
T  18889494 gccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 6127351 - 6127279
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  6127351 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 23291073 - 23291145
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  23291073 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 28675224 - 28675152
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||||||||||||  | ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  28675224 aatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 11548577 - 11548647
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagca 160  Q
    |||||||||||||||||| || ||||||||||||| || |||||||| |||||  ||||| |||| |||||    
T  11548577 aatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 9752196 - 9752151
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||    
T  9752196 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgta 9752151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 29693552 - 29693597
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||    
T  29693552 aaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 18365566 - 18365634
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  18365566 taagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 18370830 - 18370898
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  18370830 taagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  99 gtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||| || ||||||||||||  |||| ||||||||||||| ||||| |||| |||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 2121058 - 2121004
Alignment:
Q  112 catgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||||||||| |||||| || ||||||||||| || ||||||| ||||||||    
T  2121058 catgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 582599 - 582522
Alignment:
Q  90 aatctaagggtgattattgtgtc-atgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||| |||||||||| || | || ||||||||  || |||||| |||||||||||||| ||||||| ||||||||    
T  582599 aatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 2309374 - 2309329
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||  |||||| |||||||||||| ||||||||||||||    
T  2309374 aaaatctcagcttggccggaaatcatggggttgtgggtgttatgta 2309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 6127390 - 6127435
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||| ||||| |||||  |||||||||||||||||||||||||||    
T  6127390 aaaatatcagtttggccagaaatcatggggtggtgggtgttatgta 6127435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 9752234 - 9752283
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataa 139  Q
    |||||||||||||||||| || ||| ||||||||| || |||||||||||    
T  9752234 aatctaagggtgattattctgccatatcattcttgaatttttcttgataa 9752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 23291035 - 23290990
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||  ||||||||||||| |||||||||||||    
T  23291035 aaaatctcagcctggccagaaatcatggggtgatgggtgttatgta 23290990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 32702319 - 32702364
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||| ||||| |||| ||||||||||||||||||| |||||||    
T  32702319 aaaatctgagtctagccggaaatcatggggtggtgggtcttatgta 32702364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 6031734 - 6031802
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| |||||||||||||||  |  ||| ||||| ||||| ||||| |||| |||||||    
T  6031734 taagggtgattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcatt 6031802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 6127450 - 6127506
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttg 124  Q
    |||| ||||||||| |||||  |||||||  |||||||||||| |||||||||||||    
T  6127450 aaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 18889686 - 18889757
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||||| |||||| || ||||||||||||| |  ||||||||| ||||| ||||| |||| |||||||    
T  18889686 aatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 25987002 - 25986934
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||| ||||||||| || ||||||||||||| |  |||||| |||||||| ||||| |||| |||||||    
T  25987002 taagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 44094812 - 44094969
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  44094812 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 44094911  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||    
T  44094912 gtcatgtcattcttggatctttctt-ataaaataattcttgatatctagcattttcctt 44094969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 36966659 - 36966497
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  36966659 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 36966560  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttccttctta 172  Q
    || ||||| ||||||| || |||||| |||||||||||||| ||||||||||||||||||||||    
T  36966559 tgccatgttattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttctta 36966497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 25463790 - 25463946
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  25463790 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattg 25463889  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  25463890 tgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 37821785 - 37821629
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  37821785 aaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37821686  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  37821685 tgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 25973533 - 25973677
Alignment:
Q  23 tctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn--aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcatt 120  Q
    ||||||||||||||||||||||||||||||||||||           |||| ||||||||| |||||  ||| ||| |||||||||||||||||||||||    
T  25973533 tctggccgaaaatcatggggtggtgggtgttatgtattttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcatt 25973632  T
Q  121 cttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| || |||||| |||||||||||||| ||||||||||||||||    
T  25973633 cttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 41876393 - 41876235
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| |||||||||||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  41876393 aaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 41876294  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||  |||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  41876293 tgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 41876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 51737619 - 51737777
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  51737619 aaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 51737718  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  51737719 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 51737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 44690914 - 44690808
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| |||||||||||||||  |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| || ||||||| |||||| ||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttct 44690815  T
Q  168 tcttaat 174  Q
    | |||||    
T  44690814 ttttaat 44690808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 33786516 - 33786424
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcctt 33786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 40215102 - 40215257
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||  ||||||||| |||||  ||||||| |||||||||||    
T  40215102 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattg 40215201  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    || ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  40215202 tgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 19015518 - 19015675
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  19015518 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattg 19015617  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||| || |||||| |||||||||||||| |||| ||||||||||||    
T  19015618 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 20305082 - 20304923
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||              |||| || |||||| |||||  ||||||| ||||||||||    
T  20305082 aaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtgattatt 20304983  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  20304982 gtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 20304923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 3559790 - 3559887
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||  ||| ||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  3559790 aaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 6883601 - 6883757
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| ||||| ||||     
T  6883601 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatatta 6883700  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  6883701 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||| ||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 18404621 - 18404720
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  |||||||  |||||||||||| ||||||||||||  ||||||||| |||||||||||||| |||||||||||||||||    
T  18404621 aaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 19722969 - 19722894
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||    
T  19722969 aatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  93 ctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    |||||||||| |||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 9910183 - 9910086
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| |||||||||||| ||  ||||||| ||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||| ||||||||    
T  9910183 aaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 27523206 - 27523048
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||         |   || ||||||||||||||||| |||| ||||||||||| | |    
T  27523206 aaaatctcatcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatct 27523107  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    | |||   ||||||| |||||||||||||||||||||||| |||| || ||||||||||    
T  27523106 gccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcctt 27523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 33786628 - 33786696
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattt 163  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  33786628 taagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 40273778 - 40273706
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| || |||||||| |||||| ||||| ||||||||||||    
T  40273778 aatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 10167577 - 10167672
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    |||||||||||||||  ||||||| |||||||||||| |||| | ||||||  || ||| || ||||||||||||||||||| || ||||||||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttcctt 10167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 16045787 - 16045859
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  16045787 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 32000256 - 32000328
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||| ||||| |||||||||||||||| || |||||||| |||||| ||||| |||| |||||||    
T  32000256 aatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 40215064 - 40214992
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  40215064 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 44690980 - 44690935
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  44690980 aaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 6883563 - 6883491
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||| | |||||| |||||||||| |||||||    
T  6883563 aatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 44094774 - 44094702
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||  ||||| |||| |||||||    
T  44094774 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 9910244 - 9910201
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatg 56  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  9910244 aaaatctcagtatggccggaaatcatggggtggtgggtgttatg 9910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 40273816 - 40273861
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  40273816 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 40273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 9910282 - 9910354
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||| |||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  9910282 aatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 19015480 - 19015408
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  19015480 aatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 25463752 - 25463680
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||| |||||||| ||||| |||| |||||||    
T  25463752 aatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 27523248 - 27523296
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaat 142  Q
    |||||||||||||| |||||||||||||||  || ||||||||||||||    
T  27523248 taagggtgattattctgtcatgtcattcttaaatttttcttgataaaat 27523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 36966697 - 36966769
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  36966697 aatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 37821823 - 37821895
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  37821823 aatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3559731 - 3559772
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgtta 54  Q
    |||||||||| |||| || |||||||||||||||||||||||    
T  3559731 aaaatctcagcctgggcggaaatcatggggtggtgggtgtta 3559772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18404556 - 18404601
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||| ||| || ||||||| |||||||||||||||||||    
T  18404556 aaaatctcagtttggtcggaaatcatagggtggtgggtgttatgta 18404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 3559689 - 3559621
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||  |  ||| ||||||||||| ||||| |||| |||||||    
T  3559689 taagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 18404518 - 18404446
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||| |||||||||| |  ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  18404518 aatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 52329452 - 52329504
Alignment:
Q  72 gttaataaataagactataatctaagggtgattattgtgtcatgtcattcttg 124  Q
    |||||||| |||||||  |||||||||||||||||| ||  ||||||||||||    
T  52329452 gttaataattaagactgaaatctaagggtgattattctgctatgtcattcttg 52329504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 45637826 - 45637982
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  45637826 aaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 45637925  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    | ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  45637926 gccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 3962093 - 3962253
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  3962093 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 3962192  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttccttctt 171  Q
    | ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  3962193 gccatgtcattcttggatatttctt-ataaaatcattcttgatatctagcattttccttctt 3962253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 4974686 - 4974532
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||             |||||||||||||| |||||  |||||||||||||||||||    
T  4974686 aaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 4974587  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    || ||||||||||||| |||||| || |||||||||||||| ||||||||||||||    
T  4974586 tgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 42611925 - 42612082
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||             |||| |||||||||||||||  ||||||| |||||||||||    
T  42611925 aaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattg 42612024  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||  ||||||||| |||||||||||||| |||||||||||||||||    
T  42612025 tgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 15577739 - 15577640
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcct 15577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 24395086 - 24395241
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  24395086 aaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 24395185  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    | ||||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  24395186 gccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 29737317 - 29737406
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatcta 157  Q
    |||||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||| |||||||    
T  29737317 aaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 35445570 - 35445668
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||||||| ||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  35445570 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 48880878 - 48880721
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| | |||  |||||||  ||||||||||    
T  48880878 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattg 48880779  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  48880778 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 15329447 - 15329546
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||| ||||||||| |||||  |||||||  |||||||||||| ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  15329447 aaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatatctagcattttcct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 42696260 - 42696355
Alignment:
Q  72 gttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||| |||||  ||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||| || ||||||| |||||||||    
T  42696260 gttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 34483011 - 34483108
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| ||| |  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||    
T  34483011 aaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||| ||  |||||||||||| ||||||||||| |||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 30848683 - 30848839
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||             |||| ||||||||| |||||  ||| ||| |||||||||||    
T  30848683 aaaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattg 30848782  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| || |||||| |||||| ||||||| ||||||||||||||||    
T  30848783 tgccatgtcattcttgaatttttctt-ataaaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||||| |||||  ||||||||| ||||||||||||||||||||||||  || ||| ||||| ||||||||||| |||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 25167726 - 25167651
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  25167726 aatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 18037172 - 18037249
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||| || ||||||||||||||||||    
T  18037172 aatctaagggtgattattgtaccatgtcattcttaaatctttcttgat-aaatcattgttgatatctagcattttcctt 18037249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 35876417 - 35876514
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||| ||  || |||||| |||||||||||||| ||||||||||||||||    
T  35876417 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatctagcattttcc 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 15329349 - 15329277
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  15329349 aatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 48880916 - 48880988
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  48880916 aatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  101 gattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| || |||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 4974724 - 4974796
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  4974724 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 35444634 - 35444562
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  |||||||| |||||| |||||||||| |||||||    
T  35444634 aatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 42611887 - 42611815
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  42611887 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 45637788 - 45637716
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  45637788 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  92 tctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 25167801 - 25167756
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  25167801 aaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 3962051 - 3961983
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| |||||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  3962051 taagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 15577799 - 15577756
Alignment:
Q  15 aatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||| |||||||||| ||||||||||||||||    
T  15577799 aatctcagtctggccggaaatcatgggttggtgggtgttatgta 15577756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35444672 - 35444714
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttat 55  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  35444672 aaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 34482949 - 34482993
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  34482949 aaaatctcagtctggccggaaatcat-gggtggtgggtgttatgta 34482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 37477031 - 37476986
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  37477031 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 37476986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 20010087 - 20010158
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| ||| |||||||||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  20010087 aatctaagggtgattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 20010158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 34482911 - 34482839
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||| |||||||| ||||| |||| |||||||    
T  34482911 aatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15238496 - 15238538
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttat 55  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||    
T  15238496 aaaatctctgtcgggccggaaatcatggggtggtgggtgttat 15238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15329387 - 15329429
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttat 55  Q
    |||||||||| ||||||| |||||||||||||||| |||||||    
T  15329387 aaaatctcagactggccggaaatcatggggtggtgagtgttat 15329429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18037092 - 18037137
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||  |||||||||||||||||||||||||||    
T  18037092 aaaatctctgtcgggccagaaatcatggggtggtgggtgttatgta 18037137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 15238458 - 15238386
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||| |||||||||| || ||||||||||||| || |||||||| ||| |  ||||| |||| |||||||    
T  15238458 aatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcatt 15238386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 18037050 - 18036990
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||| || ||||||||||||  || |||||||| |||||| ||||| ||||    
T  18037050 taagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 36790459 - 36790527
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||| |||||| || ||||||||||||  || ||||||||||||| | ||||| |||| |||||||    
T  36790459 taagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 37477073 - 37477141
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||| |||||||| || ||||||||||||  || |||||||| |||||| ||||| |||| |||||||    
T  37477073 taaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 4892316 - 4892473
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnnaa----aggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||         ||    || ||||||||| |||||  ||||||| |||||||||||    
T  4892316 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattg 4892415  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||||||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  4892416 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 33584280 - 33584124
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  33584280 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 33584181  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  33584180 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 38899677 - 38899520
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||             |||| ||||||||| |||||  ||||||| |||| ||||||    
T  38899677 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattg 38899578  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||| || ||| || |||||||||||||| ||||||||||||||||    
T  38899577 tgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 14138782 - 14138938
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| |||  || |||||||||||||||||||||||||||         |   ||| ||||||||| ||| |  ||||||| ||||||||||||    
T  14138782 aaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgt 14138881  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    | ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14138882 gccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 12614630 - 12614531
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    |||||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||  |||||| ||||||||||||| ||| |||||||||||||||||    
T  12614630 aaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattttcct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 25398352 - 25398510
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  25398352 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 25398451  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||| ||| || |||||| |||||||||||||| ||||||||||||||||||    
T  25398452 tgccatgtcattgttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 25398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 3362892 - 3363048
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||||||||||| |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| |||| |||||    
T  3362892 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 3362991  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttc 165  Q
    ||||||||||||||||  || |||||| |||||||||||||| |||||||||||||||    
T  3362992 gtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 8145546 - 8145643
Alignment:
Q  68 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  8145546 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 37321744 - 37321587
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  37321744 aaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37321645  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    || ||| ||||||||| || |||||| |||||||||||||| |||||||||||||||||    
T  37321644 tgccatttcattcttgaatatttctt-ataaaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 2477750 - 2477906
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||||             |||| |||||||||||||||  ||||||| |||||| ||||    
T  2477750 aaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattg 2477849  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||    
T  2477850 tgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 3521957 - 3521801
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  3521957 aaaatcttagtttggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 3521858  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    | ||||||||||||  || |||||| |||||||||||||| |||||||||||||||||    
T  3521857 gccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 6043462 - 6043307
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  6043462 aaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 6043363  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    | ||||||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  6043362 gccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 12850915 - 12851069
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn-----aaaggttaataaataagactataatctaagggtgattatt 107  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||              |||| ||||||||| |||||  ||||||| |||| |||||    
T  12850915 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 12851014  T
Q  108 gtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattt 163  Q
    ||| ||||||||||||| || |||||| |||||||||||||| |||||||||||||    
T  12851015 gtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 12614722 - 12614794
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||| |||| |||||||    
T  12614722 aatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  75 aataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcct 167  Q
    ||||||| |||||  ||||||||| ||||||||||||||||||||||||  || ||| ||||| ||||||||||| |||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 27481995 - 27482095
Alignment:
Q  68 aaaggttaataaataagactataa-tctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattc-ttaatatctagcattttc 165  Q
    |||||||||||||||||| || || ||||| |||||||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||||  ||||||    
T  27481995 aaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttc 27482094  T
Q  166 c 166  Q
    |    
T  27482095 c 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 4433958 - 4433845
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta---nnnnnnnnnaaaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||            |||| |||||||||||||||  ||||||| ||||||||||||    
T  4433958 aaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgt 4433859  T
Q  110 gtcatgtcattctt 123  Q
    | ||||||||||||    
T  4433858 gccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 11361082 - 11360947
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta----nnnnnnnnnaaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||             |||| ||||||||| ||| |  ||||||| | |||||||||    
T  11361082 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattg 11360983  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcat 145  Q
    || ||||||||||||| ||||||||| ||||||||||    
T  11360982 tgccatgtcattcttgaatctttctt-ataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 22913043 - 22913115
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| || |||||||| |||||| ||||| |||| |||||||    
T  22913043 aatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 31640891 - 31640763
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta---nnnnnnnnnaaaggttaataaataagactat-aatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||            |||||||||||||||||| ||| ||||||| |  |||||||     
T  31640891 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataaga-tatcaatctaaagtcgattattc 31640793  T
Q  109 tgtcatgtcattcttgcatctttcttgata 138  Q
    || ||||||||||||| |||||||||||||    
T  31640792 tgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 2477712 - 2477640
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  2477712 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 3362854 - 3362782
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  3362854 aatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 6043500 - 6043572
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |  ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  6043500 aatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 8145451 - 8145387
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| ||||    
T  8145451 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 11361120 - 11361192
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  11361120 aatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 38899715 - 38899787
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  38899715 aatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 13664737 - 13664788
Alignment:
Q  73 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttg 124  Q
    |||||||||||||||  |||||||||||||||||| | ||||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattcttg 13664788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 4892278 - 4892206
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||| |||||| ||||| |||| |||||||    
T  4892278 aatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 12850877 - 12850805
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||| ||||| || ||||||||| ||| |  ||||||||||||||| ||||| |||| |||||||    
T  12850877 aatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 25398314 - 25398242
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||| |||||| ||||| |||| |||||||    
T  25398314 aatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 31640929 - 31640977
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 138  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||    
T  31640929 aatctaagggtggttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 17545636 - 17545594
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttat 55  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||    
T  17545636 aaaatctctgtcgggccggaaatcatggggtggtgggtgttat 17545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 27481880 - 27481830
Alignment:
Q  112 catgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||||||| || ||||||||||||||| |||||||||  |||||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 37321786 - 37321855
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattctta-atatctagcatt 162  Q
    |||||||||||||| || ||||||||||||  |  ||||||||||||||| |||||| |||| |||||||    
T  37321786 taagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcatt 37321855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 4433996 - 4434068
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||| ||||||||| |  |||||| | |||||| ||||| |||| |||||||    
T  4433996 aatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 10458465 - 10458421
Alignment:
Q  98 ggtgattattgtgtcatgtcattcttgcatctttcttgataaaat 142  Q
    |||||||||| || ||||||||||||| || ||||||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaat 10458421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 14138740 - 14138680
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||| || ||||| ||||||| |  ||||||||||||||| ||||| ||||    
T  14138740 taagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatat 14138680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 17545674 - 17545746
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||| |||||||||| || ||||||||||||| || |||||||| ||| |  ||||| |||| |||||||    
T  17545674 aatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcatt 17545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 33584322 - 33584390
Alignment:
Q  94 taagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||| || ||||||||||||  |  |||||||| |||||| ||||| |||| |||||||    
T  33584322 taagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 60; Significance: 2e-25; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 26050 - 26208
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  26050 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 26149  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  26150 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 26208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 16098 - 16256
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||             |||| ||||||||| |||||  ||||||| | |||||||||    
T  16098 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattg 16197  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcctt 168  Q
    || ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  16198 tgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 8478 - 8414
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| ||||    
T  8478 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 16060 - 15996
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| ||||    
T  16060 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 26012 - 25948
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatat 154  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| ||||    
T  26012 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 8516 - 8561
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  8516 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgta 8561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 41125 - 41280
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| ||||||||||||    
T  41125 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 41224  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
      ||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  41225 accatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 41087 - 41015
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  41087 aatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 47964 - 48119
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnna---aaggttaataaataagactataatctaagggtgattattgt 109  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||         |   ||| ||||||||| |||||  ||||||| | ||||||||||    
T  47964 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgt 48063  T
Q  110 gtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    |  |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  48064 gctatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 47926 - 47854
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||| |||  |||||||    
T  47926 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 4510 - 4666
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| |||||||||||||||||||||||||||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  4510 aaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 4609  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||| ||||||||  || |||||| |||||||||||||| ||||||||||||||||    
T  4610 tgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 4472 - 4400
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||| |||||| ||||| |||| |||||||    
T  4472 aatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

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Target: scaffold0178 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 11735 - 11891
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||             |||| ||||||||| |||||  ||||||| |||||||||||    
T  11735 aaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 11834  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcattttcc 166  Q
    || ||||||||||||  || |||||| |||||||||||||| ||||||| ||||||||    
T  11835 tgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcc 11891  T

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Target: scaffold0178; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 11697 - 11625
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| ||||| |||| |||||||    
T  11697 aatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

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Target: scaffold0471 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 12956 - 13110
Alignment:
Q  13 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatgtannnnnnnnn----aaaggttaataaataagactataatctaagggtgattattg 108  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||             |||| ||||||||| |||||  ||||||| ||| |||||||    
T  12956 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 13055  T
Q  109 tgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatttt 164  Q
    |||||||||||||||  || |||||| |||||||||||||| ||||||||||||||    
T  13056 tgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 13110  T

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Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 12918 - 12846
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    ||||||||| |||||||| || ||||||||||||| |  |||||||| |||||| ||||| |||| |||||||    
T  12918 aatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

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Target: scaffold0665 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 3144 - 3072
Alignment:
Q  90 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttaatatctagcatt 162  Q
    |||||||||||||||||| || ||||||||||||  |  ||| ||||||||||| ||||| |||| |||||||    
T  3144 aatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

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