View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20165_high_10 (Length: 419)

Name: NF20165_high_10
Description: NF20165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20165_high_10
NF20165_high_10
[»] chr1 (85 HSPs)
chr1 (171-403)||(35911745-35911981)
chr1 (174-369)||(37396700-37396899)
chr1 (171-370)||(34934604-34934807)
chr1 (171-269)||(35721202-35721300)
chr1 (312-373)||(17977561-17977622)
chr1 (312-371)||(9774890-9774949)
chr1 (312-369)||(20722472-20722529)
chr1 (312-373)||(37395629-37395690)
chr1 (318-370)||(35722293-35722345)
chr1 (214-269)||(34933622-34933677)
chr1 (312-371)||(50164401-50164460)
chr1 (312-378)||(27262899-27262965)
chr1 (312-370)||(27264218-27264276)
chr1 (312-370)||(35721100-35721158)
chr1 (312-372)||(26863857-26863917)
chr1 (221-269)||(35722192-35722240)
chr1 (328-371)||(20723706-20723749)
chr1 (214-269)||(35910756-35910811)
chr1 (214-269)||(37395737-37395792)
chr1 (319-370)||(48334141-48334192)
chr1 (327-369)||(11711270-11711312)
chr1 (312-369)||(39162823-39162881)
chr1 (312-370)||(39163026-39163084)
chr1 (328-370)||(45979514-45979556)
chr1 (312-370)||(46073884-46073942)
chr1 (321-367)||(51240121-51240167)
chr1 (312-369)||(17976761-17976818)
chr1 (312-369)||(24422515-24422572)
chr1 (312-369)||(26865186-26865243)
chr1 (312-369)||(30722116-30722173)
chr1 (312-369)||(46075052-46075109)
chr1 (317-369)||(24609919-24609971)
chr1 (312-372)||(27815438-27815498)
chr1 (312-364)||(27816722-27816774)
chr1 (312-371)||(47038864-47038923)
chr1 (315-369)||(13074121-13074175)
chr1 (312-370)||(30724017-30724075)
chr1 (338-379)||(12360937-12360978)
chr1 (312-369)||(23469971-23470028)
chr1 (58-94)||(34934493-34934529)
chr1 (338-378)||(35056521-35056561)
chr1 (58-94)||(35721365-35721401)
chr1 (58-94)||(35911633-35911669)
chr1 (58-94)||(37396605-37396641)
chr1 (312-366)||(9774040-9774094)
chr1 (171-269)||(24427226-24427324)
chr1 (338-372)||(42483240-42483274)
chr1 (317-371)||(48588968-48589022)
chr1 (321-371)||(48594059-48594109)
chr1 (321-371)||(48598670-48598720)
chr1 (338-371)||(3247196-3247229)
chr1 (338-371)||(7867326-7867359)
chr1 (338-371)||(10631497-10631530)
chr1 (338-371)||(15526331-15526364)
chr1 (338-371)||(19720710-19720743)
chr1 (171-240)||(24422648-24422717)
chr1 (328-369)||(24427387-24427428)
chr1 (338-371)||(24507812-24507845)
chr1 (338-371)||(24654136-24654169)
chr1 (338-371)||(30322927-30322960)
chr1 (338-371)||(33000638-33000671)
chr1 (338-371)||(33045659-33045692)
chr1 (338-371)||(33234544-33234577)
chr1 (338-378)||(35056863-35056904)
chr1 (338-371)||(38164264-38164297)
chr1 (338-371)||(47819565-47819598)
chr1 (338-371)||(48153011-48153044)
chr1 (338-370)||(8140433-8140465)
chr1 (338-370)||(10887232-10887264)
chr1 (338-370)||(10887567-10887599)
chr1 (338-370)||(12360602-12360634)
chr1 (338-370)||(15516581-15516613)
chr1 (338-370)||(16026907-16026939)
chr1 (312-372)||(24611119-24611179)
chr1 (338-370)||(26324584-26324616)
chr1 (338-370)||(30323262-30323294)
chr1 (337-373)||(31061119-31061155)
chr1 (338-370)||(32035757-32035789)
chr1 (312-380)||(35910643-35910709)
chr1 (338-370)||(36912852-36912884)
chr1 (338-370)||(39747804-39747836)
chr1 (338-370)||(42482978-42483010)
chr1 (338-370)||(45380271-45380303)
chr1 (338-370)||(45638863-45638895)
chr1 (338-370)||(47819231-47819263)
[»] scaffold0517 (4 HSPs)
scaffold0517 (174-369)||(10315-10514)
scaffold0517 (312-373)||(11524-11585)
scaffold0517 (214-261)||(11422-11469)
scaffold0517 (58-94)||(10573-10609)
[»] chr7 (71 HSPs)
chr7 (174-375)||(32197768-32197974)
chr7 (312-366)||(32544776-32544830)
chr7 (312-372)||(12385709-12385769)
chr7 (318-370)||(40576765-40576817)
chr7 (312-371)||(11217073-11217132)
chr7 (319-370)||(24197112-24197163)
chr7 (317-368)||(32196685-32196736)
chr7 (312-370)||(12933418-12933476)
chr7 (312-370)||(31848146-31848204)
chr7 (220-269)||(32196788-32196837)
chr7 (312-372)||(13418947-13419007)
chr7 (312-371)||(24195605-24195664)
chr7 (319-366)||(31846989-31847036)
chr7 (312-371)||(41693643-41693702)
chr7 (312-370)||(17066424-17066482)
chr7 (171-269)||(41693750-41693848)
chr7 (338-380)||(45228887-45228929)
chr7 (317-370)||(5611514-5611567)
chr7 (315-368)||(31489940-31489993)
chr7 (317-368)||(31853549-31853600)
chr7 (312-371)||(35212066-35212125)
chr7 (319-370)||(39619800-39619851)
chr7 (312-371)||(42254956-42255015)
chr7 (312-363)||(43869914-43869965)
chr7 (317-371)||(554243-554297)
chr7 (312-370)||(25046242-25046300)
chr7 (312-366)||(32543483-32543537)
chr7 (317-371)||(38742179-38742233)
chr7 (322-371)||(5610154-5610203)
chr7 (58-94)||(32197654-32197690)
chr7 (337-373)||(44568322-44568358)
chr7 (338-377)||(13770050-13770089)
chr7 (312-367)||(28462630-28462685)
chr7 (338-373)||(35837920-35837955)
chr7 (338-373)||(41053838-41053873)
chr7 (338-376)||(30223764-30223802)
chr7 (316-370)||(30513286-30513340)
chr7 (312-370)||(41694957-41695015)
chr7 (338-372)||(46828941-46828975)
chr7 (338-371)||(1614873-1614906)
chr7 (338-371)||(3975547-3975580)
chr7 (338-371)||(5233806-5233839)
chr7 (338-371)||(8144293-8144326)
chr7 (338-371)||(9659658-9659691)
chr7 (338-371)||(14543708-14543741)
chr7 (338-371)||(23399945-23399978)
chr7 (338-371)||(25092158-25092191)
chr7 (338-371)||(25092517-25092550)
chr7 (338-371)||(25988718-25988751)
chr7 (338-371)||(27458397-27458430)
chr7 (337-370)||(29198302-29198335)
chr7 (338-371)||(36687232-36687265)
chr7 (338-371)||(48852442-48852475)
chr7 (338-370)||(1614558-1614590)
chr7 (338-370)||(3975807-3975839)
chr7 (338-370)||(8144627-8144659)
chr7 (338-370)||(11767244-11767276)
chr7 (338-370)||(12932752-12932784)
chr7 (338-370)||(23399611-23399643)
chr7 (338-370)||(23676421-23676453)
chr7 (338-370)||(25988384-25988416)
chr7 (338-370)||(26878040-26878072)
chr7 (338-370)||(28262712-28262744)
chr7 (338-370)||(29198631-29198663)
chr7 (338-370)||(35838306-35838338)
chr7 (317-369)||(36748198-36748249)
chr7 (339-371)||(39438999-39439031)
chr7 (338-378)||(39719611-39719651)
chr7 (338-370)||(41054205-41054237)
chr7 (338-370)||(46759657-46759689)
chr7 (338-370)||(48192457-48192489)
[»] chr6 (52 HSPs)
chr6 (312-370)||(21953205-21953263)
chr6 (317-370)||(3276366-3276419)
chr6 (317-371)||(20391212-20391266)
chr6 (312-370)||(34998143-34998201)
chr6 (312-369)||(20897499-20897556)
chr6 (312-369)||(21165246-21165303)
chr6 (221-269)||(21953310-21953358)
chr6 (312-371)||(16995449-16995508)
chr6 (319-370)||(34995113-34995164)
chr6 (327-369)||(20393285-20393327)
chr6 (312-369)||(18810532-18810589)
chr6 (317-370)||(29291358-29291411)
chr6 (322-369)||(1972400-1972447)
chr6 (328-367)||(20895960-20895999)
chr6 (312-370)||(17517311-17517369)
chr6 (319-380)||(3279508-3279569)
chr6 (317-369)||(1974159-1974211)
chr6 (317-369)||(17000284-17000336)
chr6 (338-373)||(3276323-3276358)
chr6 (338-373)||(12757606-12757641)
chr6 (328-371)||(26421861-26421904)
chr6 (317-371)||(1171658-1171712)
chr6 (338-372)||(6412548-6412582)
chr6 (338-372)||(13268106-13268140)
chr6 (317-367)||(17516164-17516214)
chr6 (318-371)||(1170437-1170490)
chr6 (338-371)||(3968643-3968676)
chr6 (338-371)||(12299109-12299142)
chr6 (338-371)||(17765007-17765040)
chr6 (338-371)||(17765344-17765377)
chr6 (338-371)||(19690391-19690424)
chr6 (338-371)||(21385249-21385282)
chr6 (338-371)||(21385553-21385586)
chr6 (338-371)||(23502235-23502268)
chr6 (338-370)||(1007123-1007155)
chr6 (338-370)||(1007478-1007510)
chr6 (338-370)||(3414386-3414418)
chr6 (338-370)||(3968978-3969010)
chr6 (338-370)||(6412217-6412249)
chr6 (338-370)||(8170120-8170152)
chr6 (338-370)||(10910933-10910965)
chr6 (338-382)||(15117009-15117053)
chr6 (337-369)||(15442937-15442969)
chr6 (338-370)||(18024344-18024376)
chr6 (338-370)||(19129489-19129521)
chr6 (338-370)||(19321100-19321132)
chr6 (338-370)||(20467687-20467719)
chr6 (338-370)||(21147403-21147435)
chr6 (338-370)||(21994372-21994404)
chr6 (338-370)||(22543353-22543385)
chr6 (338-370)||(22543687-22543719)
chr6 (338-370)||(25137326-25137358)
[»] chr8 (65 HSPs)
chr8 (312-372)||(22272272-22272332)
chr8 (312-370)||(10717120-10717178)
chr8 (312-370)||(10718450-10718508)
chr8 (312-370)||(22270942-22271000)
chr8 (312-368)||(4182623-4182679)
chr8 (312-371)||(22534724-22534783)
chr8 (312-371)||(36588220-36588279)
chr8 (312-370)||(1376934-1376992)
chr8 (312-370)||(1385557-1385615)
chr8 (317-371)||(14197823-14197877)
chr8 (312-370)||(38456732-38456790)
chr8 (312-370)||(38658480-38658538)
chr8 (312-370)||(45517962-45518020)
chr8 (317-369)||(1420449-1420501)
chr8 (317-369)||(28998000-28998052)
chr8 (312-371)||(22533315-22533374)
chr8 (315-372)||(6783575-6783632)
chr8 (314-371)||(10292814-10292871)
chr8 (317-370)||(41847187-41847240)
chr8 (321-369)||(297130-297177)
chr8 (312-368)||(28996835-28996891)
chr8 (312-371)||(36589389-36589448)
chr8 (317-367)||(3483635-3483685)
chr8 (312-370)||(30124225-30124283)
chr8 (312-369)||(4183981-4184038)
chr8 (322-371)||(30123150-30123199)
chr8 (338-373)||(10540751-10540786)
chr8 (338-373)||(34963296-34963331)
chr8 (317-368)||(39440429-39440480)
chr8 (338-372)||(9496692-9496726)
chr8 (338-372)||(11019517-11019551)
chr8 (338-372)||(28346391-28346425)
chr8 (317-367)||(38455449-38455499)
chr8 (338-371)||(2728230-2728263)
chr8 (333-366)||(3484810-3484843)
chr8 (338-375)||(4710189-4710226)
chr8 (338-371)||(7420228-7420261)
chr8 (338-371)||(8298944-8298977)
chr8 (338-371)||(11976371-11976404)
chr8 (338-371)||(20277690-20277723)
chr8 (338-371)||(20984144-20984177)
chr8 (338-371)||(21064317-21064350)
chr8 (338-371)||(27117945-27117978)
chr8 (338-371)||(28497253-28497286)
chr8 (338-371)||(32725905-32725938)
chr8 (319-364)||(34904518-34904563)
chr8 (338-371)||(37536084-37536117)
chr8 (338-371)||(39439922-39439955)
chr8 (318-371)||(41846645-41846698)
chr8 (338-371)||(44997929-44997962)
chr8 (318-367)||(45516399-45516448)
chr8 (338-370)||(3512235-3512267)
chr8 (338-370)||(5357422-5357454)
chr8 (338-370)||(9496340-9496372)
chr8 (338-370)||(10337118-10337150)
chr8 (338-370)||(10337418-10337450)
chr8 (338-370)||(11019826-11019858)
chr8 (338-370)||(17073806-17073838)
chr8 (338-370)||(17574432-17574464)
chr8 (338-370)||(25600229-25600261)
chr8 (338-370)||(25702778-25702810)
chr8 (338-370)||(28346727-28346759)
chr8 (338-370)||(32726240-32726272)
chr8 (338-370)||(35097327-35097359)
chr8 (338-370)||(35346967-35346999)
[»] chr2 (62 HSPs)
chr2 (312-372)||(25979253-25979313)
chr2 (312-369)||(1778792-1778849)
chr2 (312-371)||(1777467-1777526)
chr2 (312-370)||(2412430-2412488)
chr2 (312-370)||(23861751-23861809)
chr2 (312-370)||(25977869-25977927)
chr2 (322-367)||(8810715-8810760)
chr2 (312-369)||(11087049-11087106)
chr2 (329-370)||(12068364-12068405)
chr2 (312-371)||(8809594-8809654)
chr2 (321-372)||(3924877-3924928)
chr2 (319-370)||(29794326-29794376)
chr2 (327-372)||(24754175-24754220)
chr2 (328-369)||(25283290-25283331)
chr2 (312-373)||(30843640-30843701)
chr2 (338-374)||(18113084-18113120)
chr2 (338-378)||(30215413-30215453)
chr2 (338-378)||(36815804-36815844)
chr2 (318-373)||(1590907-1590962)
chr2 (338-373)||(16522987-16523022)
chr2 (312-367)||(21573938-21573993)
chr2 (338-372)||(2481526-2481560)
chr2 (312-366)||(4040218-4040272)
chr2 (338-372)||(4423892-4423926)
chr2 (319-369)||(11088689-11088739)
chr2 (338-372)||(15842792-15842826)
chr2 (316-370)||(19603737-19603791)
chr2 (312-378)||(19604921-19604987)
chr2 (338-372)||(29859841-29859875)
chr2 (312-366)||(36837780-36837834)
chr2 (338-372)||(37911089-37911123)
chr2 (338-372)||(40125258-40125292)
chr2 (317-371)||(43824161-43824215)
chr2 (336-369)||(2411262-2411295)
chr2 (338-371)||(3172018-3172051)
chr2 (338-371)||(4424154-4424187)
chr2 (337-370)||(10671629-10671662)
chr2 (317-366)||(12067000-12067049)
chr2 (338-371)||(14003711-14003744)
chr2 (338-371)||(16673409-16673442)
chr2 (173-218)||(23861906-23861951)
chr2 (330-371)||(24748210-24748251)
chr2 (338-371)||(25705083-25705116)
chr2 (337-370)||(30215839-30215872)
chr2 (338-371)||(31644839-31644872)
chr2 (338-371)||(33576086-33576119)
chr2 (338-371)||(37228731-37228764)
chr2 (338-371)||(43672287-43672320)
chr2 (338-378)||(10375038-10375078)
chr2 (338-370)||(13215059-13215091)
chr2 (338-370)||(14003408-14003440)
chr2 (338-370)||(16523294-16523326)
chr2 (338-370)||(16673740-16673772)
chr2 (338-382)||(16900175-16900219)
chr2 (338-382)||(16993566-16993610)
chr2 (338-370)||(20131316-20131348)
chr2 (338-370)||(24358615-24358647)
chr2 (338-370)||(25705418-25705450)
chr2 (338-370)||(31909447-31909479)
chr2 (338-378)||(40301966-40302006)
chr2 (338-370)||(41451836-41451868)
chr2 (338-370)||(44559061-44559093)
[»] chr4 (67 HSPs)
chr4 (312-371)||(17281569-17281628)
chr4 (312-371)||(17370071-17370130)
chr4 (312-370)||(3879085-3879143)
chr4 (312-369)||(42359348-42359405)
chr4 (317-369)||(19675627-19675679)
chr4 (312-370)||(45618284-45618342)
chr4 (312-371)||(29060884-29060943)
chr4 (315-370)||(41933817-41933872)
chr4 (317-371)||(3880503-3880557)
chr4 (312-366)||(17371847-17371901)
chr4 (312-370)||(19674413-19674471)
chr4 (312-370)||(38166494-38166552)
chr4 (318-371)||(16573376-16573429)
chr4 (312-369)||(22204055-22204112)
chr4 (312-373)||(33137230-33137291)
chr4 (317-369)||(32699321-32699373)
chr4 (318-366)||(35054665-35054713)
chr4 (333-371)||(34659704-34659742)
chr4 (319-369)||(44705299-44705349)
chr4 (337-379)||(51545619-51545661)
chr4 (329-374)||(32697994-32698039)
chr4 (312-371)||(40198575-40198631)
chr4 (322-371)||(47360944-47360993)
chr4 (314-366)||(29597747-29597799)
chr4 (338-378)||(35119283-35119323)
chr4 (318-366)||(41935078-41935126)
chr4 (338-373)||(13631568-13631603)
chr4 (317-372)||(17326741-17326796)
chr4 (328-371)||(29059711-29059754)
chr4 (336-371)||(42358030-42358065)
chr4 (338-373)||(54903444-54903479)
chr4 (333-371)||(5259174-5259212)
chr4 (336-374)||(22205248-22205286)
chr4 (338-372)||(25423921-25423955)
chr4 (312-370)||(45619733-45619791)
chr4 (312-370)||(54121702-54121760)
chr4 (338-371)||(5827942-5827975)
chr4 (337-378)||(6353606-6353647)
chr4 (337-370)||(13074093-13074126)
chr4 (338-371)||(13530682-13530715)
chr4 (338-371)||(14791775-14791808)
chr4 (329-366)||(16574387-16574424)
chr4 (338-371)||(24774043-24774076)
chr4 (338-371)||(25424281-25424314)
chr4 (338-371)||(29499180-29499213)
chr4 (338-371)||(30046761-30046794)
chr4 (338-371)||(30061102-30061135)
chr4 (317-370)||(33134890-33134943)
chr4 (338-379)||(35763637-35763678)
chr4 (338-371)||(43231086-43231119)
chr4 (338-371)||(43231358-43231391)
chr4 (338-370)||(4211560-4211592)
chr4 (338-370)||(11693090-11693122)
chr4 (338-370)||(12152153-12152185)
chr4 (338-370)||(12152462-12152494)
chr4 (338-370)||(13631227-13631259)
chr4 (338-370)||(14487801-14487833)
chr4 (338-370)||(14488156-14488188)
chr4 (338-370)||(14594205-14594237)
chr4 (338-370)||(20291985-20292017)
chr4 (338-370)||(29420506-29420538)
chr4 (338-370)||(35464017-35464049)
chr4 (338-370)||(42823775-42823807)
chr4 (338-374)||(52017500-52017536)
chr4 (338-378)||(53717143-53717183)
chr4 (338-370)||(53915682-53915714)
chr4 (338-370)||(53916016-53916048)
[»] scaffold0562 (1 HSPs)
scaffold0562 (312-370)||(9921-9979)
[»] chr3 (78 HSPs)
chr3 (312-378)||(47433811-47433877)
chr3 (317-370)||(46026075-46026128)
chr3 (312-371)||(46027419-46027478)
chr3 (318-369)||(52708625-52708676)
chr3 (312-370)||(39820606-39820664)
chr3 (318-368)||(40476222-40476272)
chr3 (312-370)||(52403126-52403184)
chr3 (317-370)||(20585651-20585704)
chr3 (312-369)||(43641143-43641200)
chr3 (317-370)||(54437474-54437527)
chr3 (318-370)||(42446525-42446577)
chr3 (319-371)||(44507808-44507860)
chr3 (312-372)||(52401014-52401074)
chr3 (312-372)||(53121299-53121359)
chr3 (329-376)||(976773-976820)
chr3 (312-366)||(22508738-22508792)
chr3 (317-371)||(40477381-40477435)
chr3 (312-369)||(977848-977905)
chr3 (317-369)||(9855178-9855230)
chr3 (317-377)||(52707528-52707588)
chr3 (312-367)||(20488368-20488423)
chr3 (312-367)||(39819314-39819369)
chr3 (319-365)||(11914842-11914888)
chr3 (314-372)||(35639504-35639562)
chr3 (338-380)||(47336217-47336259)
chr3 (312-374)||(48033053-48033115)
chr3 (338-379)||(474034-474075)
chr3 (312-369)||(4705681-4705738)
chr3 (319-368)||(32637197-32637246)
chr3 (317-370)||(38505586-38505639)
chr3 (328-369)||(46104343-46104384)
chr3 (312-372)||(3416492-3416552)
chr3 (312-368)||(20489360-20489416)
chr3 (312-368)||(45267306-45267362)
chr3 (312-368)||(48035734-48035790)
chr3 (336-372)||(53122497-53122533)
chr3 (338-373)||(21553885-21553920)
chr3 (338-377)||(35177247-35177286)
chr3 (338-376)||(2486871-2486909)
chr3 (338-372)||(14772208-14772242)
chr3 (328-366)||(15782727-15782765)
chr3 (338-376)||(35569105-35569143)
chr3 (338-372)||(38232238-38232272)
chr3 (312-370)||(45268572-45268630)
chr3 (338-371)||(1721421-1721454)
chr3 (338-371)||(12741240-12741273)
chr3 (338-371)||(19844550-19844583)
chr3 (337-370)||(20405191-20405224)
chr3 (338-371)||(25615973-25616006)
chr3 (338-375)||(28552352-28552389)
chr3 (337-370)||(30106188-30106221)
chr3 (338-371)||(31480134-31480167)
chr3 (338-371)||(32119553-32119586)
chr3 (318-371)||(43734049-43734102)
chr3 (338-371)||(47005152-47005185)
chr3 (338-371)||(47114485-47114518)
chr3 (317-370)||(51004141-51004194)
chr3 (338-371)||(53113441-53113474)
chr3 (338-371)||(54608516-54608549)
chr3 (338-370)||(474377-474409)
chr3 (338-370)||(9262124-9262156)
chr3 (338-370)||(9603888-9603920)
chr3 (338-370)||(12740906-12740938)
chr3 (328-368)||(15782216-15782256)
chr3 (338-370)||(28552020-28552052)
chr3 (338-378)||(29445945-29445985)
chr3 (338-370)||(29490712-29490744)
chr3 (312-372)||(32635591-32635651)
chr3 (338-370)||(39132875-39132907)
chr3 (338-370)||(40545563-40545595)
chr3 (338-370)||(45002020-45002052)
chr3 (338-370)||(47005488-47005520)
chr3 (338-370)||(47336550-47336582)
chr3 (338-374)||(48924209-48924245)
chr3 (338-370)||(51550081-51550113)
chr3 (338-370)||(51550415-51550447)
chr3 (338-370)||(52342194-52342226)
chr3 (338-370)||(54608832-54608864)
[»] scaffold0009 (1 HSPs)
scaffold0009 (317-370)||(202578-202631)
[»] scaffold0002 (4 HSPs)
scaffold0002 (317-370)||(345904-345957)
scaffold0002 (322-370)||(376381-376429)
scaffold0002 (317-369)||(374335-374387)
scaffold0002 (312-370)||(344936-344994)
[»] scaffold0001 (2 HSPs)
scaffold0001 (312-369)||(119593-119650)
scaffold0001 (312-369)||(120987-121044)
[»] chr5 (43 HSPs)
chr5 (312-371)||(3936576-3936635)
chr5 (321-371)||(34911839-34911889)
chr5 (282-370)||(3954051-3954139)
chr5 (317-370)||(15599764-15599817)
chr5 (317-373)||(14809159-14809215)
chr5 (312-371)||(27571131-27571190)
chr5 (319-370)||(31540495-31540546)
chr5 (338-378)||(24443371-24443411)
chr5 (312-370)||(3938062-3938120)
chr5 (312-370)||(4565392-4565450)
chr5 (338-374)||(18258157-18258193)
chr5 (338-381)||(4736511-4736554)
chr5 (338-372)||(1381580-1381614)
chr5 (312-370)||(4777639-4777697)
chr5 (338-372)||(5917429-5917463)
chr5 (338-380)||(24443713-24443754)
chr5 (337-367)||(25254158-25254188)
chr5 (337-367)||(25317948-25317978)
chr5 (321-367)||(27570058-27570104)
chr5 (312-374)||(31541624-31541686)
chr5 (338-372)||(40764412-40764446)
chr5 (338-371)||(1381245-1381278)
chr5 (338-371)||(17070533-17070566)
chr5 (338-371)||(18258496-18258529)
chr5 (338-371)||(19565465-19565498)
chr5 (338-371)||(19685349-19685382)
chr5 (338-371)||(20660946-20660979)
chr5 (338-371)||(20986058-20986091)
chr5 (338-371)||(28213371-28213404)
chr5 (338-371)||(35876686-35876719)
chr5 (338-371)||(35928062-35928095)
chr5 (338-371)||(37271675-37271708)
chr5 (338-371)||(38170512-38170545)
chr5 (338-370)||(1104857-1104889)
chr5 (338-370)||(1105117-1105149)
chr5 (338-370)||(5917125-5917157)
chr5 (338-370)||(19565800-19565832)
chr5 (338-370)||(19685016-19685048)
chr5 (338-370)||(20690732-20690764)
chr5 (338-378)||(21050882-21050922)
chr5 (338-370)||(32108807-32108839)
chr5 (338-370)||(35877021-35877053)
chr5 (338-374)||(38496751-38496787)
[»] scaffold0106 (2 HSPs)
scaffold0106 (312-370)||(29728-29786)
scaffold0106 (312-370)||(30909-30967)
[»] scaffold0230 (1 HSPs)
scaffold0230 (312-369)||(433-490)
[»] scaffold0599 (1 HSPs)
scaffold0599 (319-365)||(6593-6639)
[»] scaffold0095 (1 HSPs)
scaffold0095 (317-368)||(42762-42813)
[»] scaffold0765 (1 HSPs)
scaffold0765 (328-366)||(1863-1901)
[»] scaffold0026 (2 HSPs)
scaffold0026 (339-372)||(82338-82371)
scaffold0026 (338-370)||(82675-82707)
[»] scaffold0005 (2 HSPs)
scaffold0005 (338-371)||(47923-47956)
scaffold0005 (338-370)||(223141-223173)
[»] scaffold0684 (1 HSPs)
scaffold0684 (338-370)||(2629-2661)
[»] scaffold0370 (1 HSPs)
scaffold0370 (338-374)||(258-294)
[»] scaffold0160 (1 HSPs)
scaffold0160 (338-370)||(27333-27365)
[»] scaffold0119 (1 HSPs)
scaffold0119 (337-369)||(16724-16756)
[»] scaffold0078 (1 HSPs)
scaffold0078 (338-370)||(3751-3783)
[»] scaffold0024 (1 HSPs)
scaffold0024 (338-370)||(75733-75765)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 171 - 403
Target Start/End: Original strand, 35911745 - 35911981
Alignment:
Q  171 tgccacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactatttn 270  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||     
T  35911745 tgccacctggatgccacatgtacatgtttgcaccgtcagcatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggaccagggaccatttt 35911844  T
Q  271 nnnnnnnnnnn--ttttgcagggacatttttcaannnnnnnnn--accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
                 |||||||||||| ||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35911845 aaaaaataaaaatttttgcagggacgtttttcaaattttttttttaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 35911944  T
Q  367 gccttatatataatcactaagacaaagagtattaaat 403  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35911945 gccttatatataattagtaagacaaagagtattaaat 35911981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 37396700 - 37396899
Alignment:
Q  174 cacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt--nn 271  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||        
T  37396700 cacctggatgccacatgtacatgtttgcaccgtcagcatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggaccagggactattttaaa 37396799  T
Q  272 nnnnnnnnnnttttgcagggacatttttc--aannnnnnnnnaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
              |||||||||||| ||||||  ||         ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  37396800 aaacaaaaaattttgcagggacgtttttcaaaaaatttttttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 37396899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 171 - 370
Target Start/End: Original strand, 34934604 - 34934807
Alignment:
Q  171 tgccacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt- 269  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  34934604 tgccacctggatgccacatgtacatatttgcaccgtcagcatctgcaaagtatgcataaatgtgacaaatcatcgaaaaagtgggaccagggactatttt 34934703  T
Q  270 -nnnnnnnnnnnnttttgcagggacatttttc--aannnnnnnnnaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
                 ||||||| |||| ||||||  ||         |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  34934704 aaaaaacaaaaaattttgcatggacgtttttcaaaaaaaaattttaccaaggaccaaaacccaaattcgctatatttgcagggacaaaaagcatatttta 34934803  T
Q  367 gcct 370  Q
    ||||    
T  34934804 gcct 34934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 35721300 - 35721202
Alignment:
Q  171 tgccacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    |||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35721300 tgccacctagatgccacatgtaaatgtttgcaccgtcagcatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggaccagggactattt 35721202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 17977561 - 17977622
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17977561 accaaggaccaaaacccaaattcgctatatttgcagggaccaaaaccatatttaagccttat 17977622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 9774890 - 9774949
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  9774890 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcctt 9774949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 20722529 - 20722472
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  20722529 accagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttagcc 20722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 37395690 - 37395629
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  37395690 accagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagccttat 37395629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 35722293 - 35722345
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  35722293 gaccaaaatccaaattcgctatatttacagggaccaaaaacatattttagcct 35722345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 34933677 - 34933622
Alignment:
Q  214 tgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  34933677 tgccaggtatgcataaatgtgacaaatcatcgaaaaagtgggaccagagactattt 34933622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 50164460 - 50164401
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||    
T  50164460 accaaggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttagcctt 50164401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 27262965 - 27262899
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||| |||||||||  |||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  27262965 accagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttagccttatttata 27262899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 27264218 - 27264276
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  27264218 accagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcct 27264276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 35721158 - 35721100
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  35721158 accagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcct 35721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 26863917 - 26863857
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| || ||||||||||||    
T  26863917 accagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttagcctta 26863857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 35722192 - 35722240
Alignment:
Q  221 tatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  35722192 tatgcataaatgtgacaaatcatcgaaaaagtgggactagggactattt 35722240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 20723706 - 20723749
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  20723706 caaattcgctatatttgcagggaccaaaaacatattttagcctt 20723749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 35910811 - 35910756
Alignment:
Q  214 tgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || ||||||||    
T  35910811 tgccaggtatgcataaatgtgacaaatcatcgaaaaagtgggacgagagactattt 35910756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 37395792 - 37395737
Alignment:
Q  214 tgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||    
T  37395792 tgccaggtatgcataaatgtgacaaatcatcgaaaaagtgggaccaggaattattt 37395737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 48334141 - 48334192
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  48334141 accaaaactcaaattcgctatatttgtagggaccaaaagcatattttagcct 48334192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 11711270 - 11711312
Alignment:
Q  327 ccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  11711270 ccaaattcgctatatttgcagggaccaaaaacatattttagcc 11711312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 39162881 - 39162823
Alignment:
Q  312 accaaggaccaaaatccaaattcgctat-atttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||| |||||||    
T  39162881 accaaggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttagcc 39162823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 39163026 - 39163084
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||  |||| |||||||||||||||||||||||||||||||||    
T  39163026 accagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttagcct 39163084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 45979514 - 45979556
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  45979514 caaattcgctatatttgcagggaccaaaaacatattttagcct 45979556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 46073942 - 46073884
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||| |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  46073942 accagggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttagcct 46073884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 367
Target Start/End: Complemental strand, 51240167 - 51240121
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  51240167 caaaatccaaattcgctatatttgcagagaccaaaaacatattttag 51240121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 17976818 - 17976761
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||    
T  17976818 accagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatatttaagcc 17976761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 24422572 - 24422515
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||| |||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  24422572 accagggatcaaaatccaacttcactatatttacagggaccaaaagcatattttagcc 24422515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 26865186 - 26865243
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||| |||||||||||||||||||||||||| ||||||||  |||||||||||    
T  26865186 accagggactaaaatccaaattcgctatatttgcagagaccaaaaatatattttagcc 26865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 30722173 - 30722116
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||| | |||||||| |||||||  |||||||||||||||||    
T  30722173 accaaggaccaaaatccaaacttgctatattcgcagggattaaaagcatattttagcc 30722116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 46075052 - 46075109
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||    
T  46075052 accagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcc 46075109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 24609971 - 24609919
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||    
T  24609971 ggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 24609919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 27815498 - 27815438
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||| ||||||| ||||||||||||||||||| || ||||||| |||||||    
T  27815498 accagggaccaaaacccaaattggctatatttgcagggaccagaaccatatttaagcctta 27815438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 27816722 - 27816774
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattt 364  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  27816722 accagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 47038923 - 47038864
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| | ||||||||||||||||| |||| ||||||||||||||    
T  47038923 accagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttagcctt 47038864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 13074175 - 13074121
Alignment:
Q  315 aaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||  |||||||||||||||||||| |||||| || |||||||||||    
T  13074175 aaggaccaaaactcaaattcgctatatttgcagagaccaagagaatattttagcc 13074121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 30724017 - 30724075
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||||||||  |||||| | ||||||||||||||| ||||||||||||||||||    
T  30724017 accagggaccaaaactcaaatttgttatatttgcagggacgaaaagcatattttagcct 30724075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 12360937 - 12360978
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataa 379  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  12360937 atatttgcagggaccaaaaccatattttagccttatttataa 12360978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 23469971 - 23470028
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||| ||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  23469971 accagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttagcc 23470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 34934493 - 34934529
Alignment:
Q  58 tgcagtgtgttttacaaaataatttattcaatcctta 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34934493 tgcagtgtgttttccaaaataatttattcaatcctta 34934529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 35056561 - 35056521
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  35056561 atatttgcagggaccaaaaccatattttagccatatatata 35056521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 35721401 - 35721365
Alignment:
Q  58 tgcagtgtgttttacaaaataatttattcaatcctta 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35721401 tgcagtgtgttttccaaaataatttattcaatcctta 35721365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 35911633 - 35911669
Alignment:
Q  58 tgcagtgtgttttacaaaataatttattcaatcctta 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35911633 tgcagtgtgttttccaaaataatttattcaatcctta 35911669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 37396605 - 37396641
Alignment:
Q  58 tgcagtgtgttttacaaaataatttattcaatcctta 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37396605 tgcagtgtgttttccaaaataatttattcaatcctta 37396641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 9774094 - 9774040
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||| |||||||||  |||| ||| |||||||||||||||||||| |||||||||    
T  9774094 accagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 24427226 - 24427324
Alignment:
Q  171 tgccacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||| |||||| ||||||||||| |||||||  |||| ||| |  ||| || ||| ||||| ||||||||| | | |||||||| |||||||||||||    
T  24427226 tgccaactggatgccacatgtacaggtttgcatagtcagcatatttcaaataggcaaaaatgagacaaatcaccaagaaagtgggttcagggactattt 24427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 42483240 - 42483274
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  42483240 atatttgcagggaccaaaaccatattttagcctta 42483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 48588968 - 48589022
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| ||||| || | |||||| |||||||||||| ||||||||||||||    
T  48588968 ggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttagcctt 48589022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 48594059 - 48594109
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||| ||||| |||| |||||| |||||||||||| ||||||||||||||    
T  48594059 caaaacccaaactcgccatatttacagggaccaaaaacatattttagcctt 48594109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 48598670 - 48598720
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||| ||||| |||| |||||| |||||||||||| ||||||||||||||    
T  48598670 caaaacccaaactcgccatatttacagggaccaaaaacatattttagcctt 48598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 3247229 - 3247196
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  3247229 atatttgcagggaccaaaaccatattttagcctt 3247196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 7867326 - 7867359
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  7867326 atatttgcagggaccaaaaccatattttagcctt 7867359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 10631497 - 10631530
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  10631497 atatttgcagggaccaaaaccatattttagcctt 10631530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 15526331 - 15526364
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  15526331 atatttgcagggaccaaaaccatattttagcctt 15526364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 19720743 - 19720710
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  19720743 atatttgcagggaccaaaaccatattttagcctt 19720710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 24422717 - 24422648
Alignment:
Q  171 tgccacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaat 240  Q
    |||||||||||| |||||||||||||||||||  |||| ||| |||||  || ||| ||||| |||||||    
T  24422717 tgccacctggatgccacatgtacatgtttgcatagtcagcatatgccacataggcagaaatgagacaaat 24422648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 369
Target Start/End: Original strand, 24427387 - 24427428
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||||||||||| ||||||||||| ||||||||||||    
T  24427387 caaactcgctatatttgtagggaccaaaaacatattttagcc 24427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 24507812 - 24507845
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  24507812 atatttgcagggaccaaaaccatattttagcctt 24507845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 24654136 - 24654169
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  24654136 atatttgcagggaccaaaaccatattttagcctt 24654169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 30322960 - 30322927
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  30322960 atatttgcagggaccaaaaccatattttagcctt 30322927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 33000638 - 33000671
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  33000638 atatttgcagggaccaaaaccatattttagcctt 33000671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 33045659 - 33045692
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  33045659 atatttgcagggaccaaaaccatattttagcctt 33045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 33234577 - 33234544
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  33234577 atatttgcagggaccaaaaccatattttagcctt 33234544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 35056863 - 35056904
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct-tatatata 378  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  35056863 atatttgcagggaccaaaatcatattttagcctatatatata 35056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 38164264 - 38164297
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  38164264 atatttgcagggaccaaaaccatattttagcctt 38164297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 47819565 - 47819598
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  47819565 atatttgcagggaccaaaaccatattttagcctt 47819598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 48153011 - 48153044
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||| ||||||||||||||||||||    
T  48153011 atatttgcagggagcaaaagcatattttagcctt 48153044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 8140465 - 8140433
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  8140465 atatttgcagggaccaaaaccatattttagcct 8140433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 10887264 - 10887232
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  10887264 atatttgcagggaccaaaaccatattttagcct 10887232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 10887567 - 10887599
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  10887567 atatttgcagggaccaaaaccatattttagcct 10887599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 12360634 - 12360602
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  12360634 atatttgcagggaccaaaaccatattttagcct 12360602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 15516613 - 15516581
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  15516613 atatttgcagggaccaaaaccatattttagcct 15516581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 16026907 - 16026939
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  16026907 atatttgcagggaccaaaaccatattttagcct 16026939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 24611119 - 24611179
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| |||||||||  |||| |||  |||||| |||||||||||| |||||||||||||||    
T  24611119 accagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttagcctta 24611179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 26324616 - 26324584
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  26324616 atatttgcagggaccaaaatcatattttagcct 26324584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 30323262 - 30323294
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  30323262 atatttgcagggaccaaaatcatattttagcct 30323294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 31061119 - 31061155
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  31061119 tatatttgcagggatcaaaaccatattttagccttat 31061155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 32035757 - 32035789
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  32035757 atatttgcagggaccaaaaccatattttagcct 32035789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 35910709 - 35910643
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttatatataat 380  Q
    |||| ||||||||| | ||||  |||||||||||||| ||||||| |||||||||||| ||||||||||    
T  35910709 accagggaccaaaaccgaaatatgctatatttgcagg-accaaaatcatattttagcc-tatatataat 35910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 36912884 - 36912852
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  36912884 atatttgcagggaccaaaaccatattttagcct 36912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 39747804 - 39747836
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  39747804 atatttgcagggaccaaaaccatattttagcct 39747836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 42483010 - 42482978
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  42483010 atatttgcagggaccaaaaccatattttagcct 42482978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 45380303 - 45380271
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  45380303 atatttgcagggaccaaaaccatattttagcct 45380271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 45638863 - 45638895
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  45638863 atatttgcagggaccaaaaccatattttagcct 45638895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 47819263 - 47819231
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  47819263 atatttgcagggaccaaaaccatattttagcct 47819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 91; Significance: 6e-44; HSPs: 4)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 10514 - 10315
Alignment:
Q  174 cacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt--nn 271  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||        
T  10514 cacctggatgccacatgtacatgtttgcaccgtcagcatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggaccagggactattttaaa 10415  T
Q  272 nnnnnnnnnnttttgcagggacatttttc--aannnnnnnnnaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
              |||||||||||| ||||||  ||         ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10414 aaacaaaaaattttgcagggacgtttttcaaaaaatttttttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 11524 - 11585
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11524 accagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagccttat 11585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 11422 - 11469
Alignment:
Q  214 tgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagg 261  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11422 tgccaggtatgcataaatgtgacaaatcatcgaaaaagtgggaccagg 11469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 10609 - 10573
Alignment:
Q  58 tgcagtgtgttttacaaaataatttattcaatcctta 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10609 tgcagtgtgttttccaaaataatttattcaatcctta 10573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 174 - 375
Target Start/End: Original strand, 32197768 - 32197974
Alignment:
Q  174 cacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt--nn 271  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||        
T  32197768 cacctggatgccacatgtacatgtttgcaccgtcagcatctgccaagtatgcataaatgtgacaaatcatcgaaaaaatgggaccagggactattttaaa 32197867  T
Q  272 nnnnnnnnnnttttgcagggacatttttcaa---nnnnnnnnnaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
              ||||||||||||  |||||||            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32197868 aaacaaaaaattttgcagggacgcttttcaaaattttttttttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttagc 32197967  T
Q  369 cttatat 375  Q
    || ||||    
T  32197968 ctaatat 32197974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 32544776 - 32544830
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  32544776 accaaggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 12385709 - 12385769
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  12385709 accagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatattttatcctta 12385769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 40576817 - 40576765
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  40576817 gaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttagcct 40576765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 11217073 - 11217132
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  11217073 accagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatattttaacctt 11217132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 24197112 - 24197163
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  24197112 accaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcct 24197163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 32196736 - 32196685
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  32196736 ggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttagc 32196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 12933476 - 12933418
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  12933476 accagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagcct 12933418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 31848146 - 31848204
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  31848146 accagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttagcct 31848204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 32196837 - 32196788
Alignment:
Q  220 gtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  32196837 gtatgcataaatgtgacaaatcatcgaaaaagtgggaccagagactattt 32196788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 13419007 - 13418947
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||| | |||||||||| ||||||||||||||||||| |||||||||||||||    
T  13419007 accagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttagcctta 13418947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 24195664 - 24195605
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  24195664 accagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcctt 24195605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 366
Target Start/End: Complemental strand, 31847036 - 31846989
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  31847036 accaaaatccaaattagatatatttgcagggaccaaaagcatatttta 31846989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 41693702 - 41693643
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||    
T  41693702 accagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcctt 41693643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 17066482 - 17066424
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||    
T  17066482 accagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttagcct 17066424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 41693848 - 41693750
Alignment:
Q  171 tgccacctggataccacatgtacatgtttgcaccgtcaacatctgccaagtatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    |||||| |||||  |||||||||| ||||| ||||||| |   |||||  |||||| ||||||||||||||||| ||||||| || |||||||||||||    
T  41693848 tgccacgtggatgtcacatgtacaagtttgtaccgtcagctaatgccacatatgcacaaatgtgacaaatcatcaaaaaagtagggtcagggactattt 41693750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 45228887 - 45228929
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataat 380  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  45228887 atatttgcagggaccaaaaccatattttagccttatatataat 45228929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 5611514 - 5611567
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  5611514 ggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcct 5611567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 31489940 - 31489993
Alignment:
Q  315 aaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    ||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||    
T  31489940 aaggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttagc 31489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 31853600 - 31853549
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    ||||||||||||||| || | ||||||||||||||||||| |||||||||||    
T  31853600 ggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttagc 31853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 35212125 - 35212066
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| |||  ||||||||||||||||||| ||||||||||||||    
T  35212125 accagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagcctt 35212066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 39619800 - 39619851
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttagcct 39619851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 42255015 - 42254956
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| |||||||||  |||| |||| |||||| |||||||||||||||||||||||||||    
T  42255015 accagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagcctt 42254956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 43869914 - 43869965
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatt 363  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  43869914 accagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 554297 - 554243
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| ||||| |||||||||||||||||||||| |  |||||||||||||    
T  554297 ggaccaaaacccaaactcgctatatttgcagggaccaatattatattttagcctt 554243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 25046242 - 25046300
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||| ||| |||| ||||||||| ||||||||| |||||||||||||    
T  25046242 accatggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttagcct 25046300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 32543537 - 32543483
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||| ||||| ||||| | |||||||||| |||||||||||||||||||||    
T  32543537 accaaggatcaaaacccaaacttgctatatttgtagggaccaaaagcatatttta 32543483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 38742233 - 38742179
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| ||||| ||||||||||||||||||| |||| ||||||||| ||||    
T  38742233 ggaccaaaacccaaactcgctatatttgcagggactaaaaacatattttaacctt 38742179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 5610203 - 5610154
Alignment:
Q  322 aaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||| ||||    
T  5610203 aaaacccaaattcgttatatttgcagggatcaaaagcatattttaacctt 5610154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 32197654 - 32197690
Alignment:
Q  58 tgcagtgtgttttacaaaataatttattcaatcctta 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  32197654 tgcagtgtgttttccaaaataatttattcaatcctta 32197690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 44568358 - 44568322
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44568358 tatatttgcagggaccaaaaccatattttagccttat 44568322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 377
Target Start/End: Original strand, 13770050 - 13770089
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatat 377  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  13770050 atatttgcagggactaaaaccatattttagccttatatat 13770089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 367
Target Start/End: Original strand, 28462630 - 28462685
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||| ||| ||||| |||||||||  |||||||||| |||||||||||||||||||    
T  28462630 accagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttag 28462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 35837955 - 35837920
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  35837955 atatttgcagggaccaaaaccatattttagccttat 35837920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 41053873 - 41053838
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41053873 atatttgcagggaccaaaaccatattttagccttat 41053838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 376
Target Start/End: Original strand, 30223764 - 30223802
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatata 376  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  30223764 atatttgcatggaccaaaaccatattttagccttatata 30223802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 30513286 - 30513340
Alignment:
Q  316 aggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||| ||   ||||||||| ||||||||| |||||||||||||    
T  30513286 aggaccaaaatccaaactcatcatatttgcaaggaccaaaatcatattttagcct 30513340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 41694957 - 41695015
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||||||||  |||| ||||||||||||||||||  |||| |||||||||||||    
T  41694957 accagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttagcct 41695015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 46828975 - 46828941
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  46828975 atatttgcagggaccaaaaccatattttagcctta 46828941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 1614873 - 1614906
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  1614873 atatttgcagggaccaaaaccatattttagcctt 1614906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 3975580 - 3975547
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  3975580 atatttgcagggaccaaaaccatattttagcctt 3975547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 5233839 - 5233806
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  5233839 atatttgcagggaccaaaaccatattttagcctt 5233806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 8144326 - 8144293
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  8144326 atatttgcagggaccaaaaccatattttagcctt 8144293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 9659658 - 9659691
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  9659658 atatttgcagggaccaaaaccatattttagcctt 9659691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 14543741 - 14543708
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  14543741 atatttgcagggaccaaaaccatattttagcctt 14543708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 23399945 - 23399978
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  23399945 atatttgcagggaccaaaaccatattttagcctt 23399978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 25092191 - 25092158
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  25092191 atatttgcagggaccaaaaccatattttagcctt 25092158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 25092517 - 25092550
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  25092517 atatttgcagggaccaaaaccatattttagcctt 25092550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 25988718 - 25988751
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  25988718 atatttgcagggaccaaaaccatattttagcctt 25988751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 27458430 - 27458397
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  27458430 atatttgcagggaccaaaaccatattttagcctt 27458397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 29198335 - 29198302
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||| |||||||||||||    
T  29198335 tatatttgcagggaccaaaaccatattttagcct 29198302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 36687232 - 36687265
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  36687232 atatttgcagggaccaaaatcatattttagcctt 36687265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 48852475 - 48852442
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  48852475 atatttgcagggaccaaaaccatattttagcctt 48852442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 1614590 - 1614558
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  1614590 atatttgcagggaccaaaaccatattttagcct 1614558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 3975807 - 3975839
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  3975807 atatttgcagggaccaaaaccatattttagcct 3975839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 8144627 - 8144659
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  8144627 atatttgcagggaccaaaaccatattttagcct 8144659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 11767244 - 11767276
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  11767244 atatttgcagggaccaaaaccatattttagcct 11767276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 12932752 - 12932784
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  12932752 atatttgcagggaccaaaaacatattttagcct 12932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 23399643 - 23399611
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  23399643 atatttgcagggaccaaaaccatattttagcct 23399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 23676421 - 23676453
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  23676421 atatttgcagggaccaaaaccatattttagcct 23676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 25988416 - 25988384
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  25988416 atatttgcagggaccaaaaccatattttagcct 25988384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 26878040 - 26878072
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  26878040 atatttgcagggaccaaaaccatattttagcct 26878072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 28262744 - 28262712
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  28262744 atatttgcagggaccaaaaccatattttagcct 28262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 29198631 - 29198663
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  29198631 atatttgcagggaccaaaaccatattttagcct 29198663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 35838306 - 35838338
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  35838306 atatttgcagggaccaaaaccatattttagcct 35838338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 36748249 - 36748198
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||| ||||| || | ||||||||||||||||||| ||||||||||||    
T  36748249 ggaccaaaacccaaactctc-atatttgcagggaccaaaaacatattttagcc 36748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 39438999 - 39439031
Alignment:
Q  339 tatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||||||||||| ||||||||||||||    
T  39438999 tatttgcagggaccaaaaccatattttagcctt 39439031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 39719611 - 39719651
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||| |||| ||||||||||||| |||||||    
T  39719611 atatttgcagggactaaaaccatattttagcctaatatata 39719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 41054205 - 41054237
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  41054205 atatttgcagggaccaaaaccatattttagcct 41054237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 46759689 - 46759657
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  46759689 atatttgcagggaccaaaaccatattttagcct 46759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 48192457 - 48192489
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  48192457 atatttgcagggaccaaaaccatattttagcct 48192489  T

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Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 21953263 - 21953205
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21953263 accagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 21953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 3276419 - 3276366
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3276419 ggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttagcct 3276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 20391266 - 20391212
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  20391266 ggaccaaaacccaaattcactatatttgcagggaccaaaagcatattttaacctt 20391212  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 34998143 - 34998201
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  34998143 accagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagcct 34998201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 20897499 - 20897556
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  20897499 accagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttagcc 20897556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 21165303 - 21165246
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  21165303 accagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttagcc 21165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 21953358 - 21953310
Alignment:
Q  221 tatgcataaatgtgacaaatcatcgaaaaagtgggatcagggactattt 269  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  21953358 tatgcataaatgtgacaaatcatcgaaaaagtgggactagggactattt 21953310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 16995508 - 16995449
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||    
T  16995508 accagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagcctt 16995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 370
Target Start/End: Complemental strand, 34995164 - 34995113
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  34995164 accaaaactcaaattcgctatatttgcagggatcaaaagcatattttagcct 34995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 20393285 - 20393327
Alignment:
Q  327 ccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  20393285 ccaaattcgctatatttgcagggatcaaaagcatattttagcc 20393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 18810589 - 18810532
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| ||||| || ||||||||||||||||||||| ||||||||||||    
T  18810589 accagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 18810532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 29291411 - 29291358
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||    
T  29291411 ggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttagcct 29291358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 1972447 - 1972400
Alignment:
Q  322 aaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  1972447 aaaacccaaattcgctttatttgcagggaccaaaaacatattttagcc 1972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 367
Target Start/End: Complemental strand, 20895999 - 20895960
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  20895999 caaattcgctatatttgcagggaccaaaaacatattttag 20895960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 17517311 - 17517369
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||||||||  |||| |||| ||||||||||||||||||| |||||||||||||    
T  17517311 accagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttagcct 17517369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 380
Target Start/End: Original strand, 3279508 - 3279569
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttatatataat 380  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||||| |||| ||| ||||    
T  3279508 accaaaattcaaactcgctatatttgcagggatcaaaaacatattttaaccttgtatttaat 3279569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 1974159 - 1974211
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||  ||||||||||||||||||| ||| ||||| ||||||||||||    
T  1974159 ggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttagcc 1974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 17000284 - 17000336
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||| ||||| || ||| |||||||||||||||||| |||||||||||    
T  17000284 ggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttagcc 17000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 3276323 - 3276358
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3276323 atatttgcagggaccaaaaccatattttagccttat 3276358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 12757641 - 12757606
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12757641 atatttgcagggaccaaaaccatattttagccttat 12757606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 26421861 - 26421904
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||    
T  26421861 caaattcgctatatttgcagagaccaaaaacatgttttagcctt 26421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 1171658 - 1171712
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| ||||| ||| |||||||||||||| ||||| ||||||||| ||||    
T  1171658 ggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatattttaacctt 1171712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 6412548 - 6412582
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  6412548 atatttgcagggaccaaaaccatattttagcctta 6412582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 13268140 - 13268106
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  13268140 atatttgcagggaccaaaaccatattttagcctta 13268106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 17516214 - 17516164
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    ||||||||| ||||| || | ||||||||||||||||||| ||||||||||    
T  17516214 ggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttag 17516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 1170490 - 1170437
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||||||||| | | ||||| ||||||| |||| ||||||||||||||    
T  1170490 gaccaaaatccaaatttgttttatttacagggactaaaatcatattttagcctt 1170437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 3968676 - 3968643
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  3968676 atatttgcagggaccaaaaccatattttagcctt 3968643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 12299109 - 12299142
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  12299109 atatttgcagggaccaaaaccatattttagcctt 12299142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 17765040 - 17765007
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  17765040 atatttgcagggaccaaaaccatattttagcctt 17765007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 17765344 - 17765377
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  17765344 atatttgcagggaccaaaatcatattttagcctt 17765377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 19690424 - 19690391
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  19690424 atatttgcagggaccaaaaccatattttagcctt 19690391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 21385282 - 21385249
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  21385282 atatttgcagggaccaaaaccatattttagcctt 21385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 21385553 - 21385586
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  21385553 atatttgcagggaccaaaaccatattttagcctt 21385586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 23502268 - 23502235
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  23502268 atatttgcagggaccaaaaccatattttagcctt 23502235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 1007155 - 1007123
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  1007155 atatttgcagggaccaaaaccatattttagcct 1007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 1007478 - 1007510
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  1007478 atatttgcagggaccaaaaccatattttagcct 1007510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 3414418 - 3414386
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  3414418 atatttgcagggaccaaaaccatattttagcct 3414386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 3968978 - 3969010
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  3968978 atatttgcagggaccaaaaccatattttagcct 3969010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 6412249 - 6412217
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  6412249 atatttgcagggaccaaaaccatattttagcct 6412217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 8170120 - 8170152
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  8170120 atatttgcagggaccaaaaccatattttagcct 8170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 10910933 - 10910965
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  10910933 atatttgcagggaccaaaaccatattttagcct 10910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 15117009 - 15117053
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataatca 382  Q
    |||||||||||||| |||| |||||||||||||||| | ||||||    
T  15117009 atatttgcagggactaaaaccatattttagccttatttttaatca 15117053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Complemental strand, 15442969 - 15442937
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||| ||||||||||||    
T  15442969 tatatttgcagggaccaaaaccatattttagcc 15442937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 18024344 - 18024376
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  18024344 atatttgcagggaccaaaaccatattttagcct 18024376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 19129489 - 19129521
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  19129489 atatttgcagggaccaaaatcatattttagcct 19129521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 19321100 - 19321132
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  19321100 atatttgcagggaccaaaaccatattttagcct 19321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 20467687 - 20467719
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  20467687 atatttgcagggaccaaaaccatattttagcct 20467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 21147435 - 21147403
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  21147435 atatttgcagggaccaaaaccatattttagcct 21147403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 21994372 - 21994404
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  21994372 atatttgcagggaccaaaaccatattttagcct 21994404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 22543385 - 22543353
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  22543385 atatttgcagggaccaaaaccatattttagcct 22543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 22543687 - 22543719
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  22543687 atatttgcagggaccaaaaccatattttagcct 22543719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 25137326 - 25137358
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  25137326 atatttgcagggaccaaaaccatattttagcct 25137358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 22272272 - 22272332
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  22272272 accagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttagcctta 22272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 10717178 - 10717120
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10717178 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 10717120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 10718450 - 10718508
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10718450 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 10718508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 22271000 - 22270942
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22271000 accagggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttagcct 22270942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 4182679 - 4182623
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4182679 accagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttagc 4182623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 22534724 - 22534783
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  22534724 accagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagcctt 22534783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 36588279 - 36588220
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  36588279 accagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttagcctt 36588220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 1376992 - 1376934
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  1376992 accagggaccaaaatccaaattggctatatttgcagggaccaaaatcatatttaagcct 1376934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 1385557 - 1385615
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  1385557 accagggaccaaaatccaaattggctatatttgcagggaccaaaaccatatttaagcct 1385615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 14197877 - 14197823
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  14197877 ggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttagcctt 14197823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 38456732 - 38456790
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  38456732 accagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttagcct 38456790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 38658538 - 38658480
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  38658538 accagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttagcct 38658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 45517962 - 45518020
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  45517962 accagggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttagcct 45518020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 1420449 - 1420501
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  1420449 ggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttagcc 1420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 28998000 - 28998052
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  28998000 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 28998052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 22533374 - 22533315
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||    
T  22533374 accagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttagcctt 22533315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 6783632 - 6783575
Alignment:
Q  315 aaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||||||||||| ||||||| | |||||||||| |||||||| |||||||||||||||    
T  6783632 aaggaccaaaattcaaattcaccatatttgcagtgaccaaaaacatattttagcctta 6783575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 10292871 - 10292814
Alignment:
Q  314 caaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||| |||||  ||||||||||||||||| ||||||||||| ||||||||||||||    
T  10292871 caaggatcaaaacgcaaattcgctatatttgaagggaccaaaatcatattttagcctt 10292814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 41847187 - 41847240
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||  |||||||||||||||||||| ||| ||||||||||||||||||    
T  41847187 ggaccaaaactcaaattcgctatatttgcagagactaaaagcatattttagcct 41847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 297130 - 297177
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  297130 caaaatccaaattcgctatatttgcaggga-ctaaagcatattttagcc 297177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 28996891 - 28996835
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||| ||||||||| ||||| || ||||||||||||||||||||| |||||||||||    
T  28996891 accagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 28996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 36589389 - 36589448
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||||||| | ||| |||||||||||||||| || |||| ||||||||||||||    
T  36589389 accaaggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttagcctt 36589448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 3483685 - 3483635
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||||||||  |||| |||||||||||||||||||||||| ||||||||||    
T  3483685 ggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 30124225 - 30124283
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||||||||  |||| | ||| ||||||||||||||||||||||||||||||||    
T  30124225 accagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttagcct 30124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 4183981 - 4184038
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| |||||  | |||||||||||||||| |||||||||||||||||    
T  4183981 accagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttagcc 4184038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 30123199 - 30123150
Alignment:
Q  322 aaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||||    
T  30123199 aaaacccaaattcgctatatttgtatggaccaaaaacatattttagcctt 30123150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 10540751 - 10540786
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10540751 atatttgcagggaccaaaaccatattttagccttat 10540786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 34963331 - 34963296
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34963331 atatttgcagggaccaaaaccatattttagccttat 34963296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 39440429 - 39440480
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||||||||  |||| |||| ||||||||| |||||||||||||||||||||    
T  39440429 ggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 39440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 9496692 - 9496726
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  9496692 atatttgcagggaccaaaaccatattttagcctta 9496726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 11019551 - 11019517
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  11019551 atatttgcagggaccaaaaccatattttagcctta 11019517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 28346425 - 28346391
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  28346425 atatttgcagggaccaaaaccatattttagcctta 28346391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 38455499 - 38455449
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||||||||  ||||||| ||||||||||| ||||||||| ||||||||||    
T  38455499 ggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttag 38455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 2728263 - 2728230
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  2728263 atatttgcagggaccaaaatcatattttagcctt 2728230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 366
Target Start/End: Original strand, 3484810 - 3484843
Alignment:
Q  333 tcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||||||||||| |||||||||||||||||    
T  3484810 tcgctatatttgcaggaaccaaaagcatatttta 3484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 4710189 - 4710226
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatat 375  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  4710189 atatttgcagggaccaaaaccatattttagcctaatat 4710226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 7420261 - 7420228
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  7420261 atatttgcagggaccaaaaccatattttagcctt 7420228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 8298944 - 8298977
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  8298944 atatttgcagggaccaaaaccatattttagcctt 8298977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 11976404 - 11976371
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  11976404 atatttgcagggaccaaaaccatattttagcctt 11976371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 20277723 - 20277690
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  20277723 atatttgcagggaccaaaaccatattttagcctt 20277690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 20984177 - 20984144
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  20984177 atatttgcagggaccaaaaccatattttagcctt 20984144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 21064350 - 21064317
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  21064350 atatttgcagggaccaaaaccatattttagcctt 21064317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 27117945 - 27117978
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  27117945 atatttgcagggaccaaaaccatattttagcctt 27117978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 28497286 - 28497253
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  28497286 atatttgcagggaccaaaatcatattttagcctt 28497253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 32725938 - 32725905
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  32725938 atatttgcagggaccaaaaccatattttagcctt 32725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 34904518 - 34904563
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattt 364  Q
    ||||||| |||||||||||||||||| |||||| |||| |||||||    
T  34904518 accaaaacccaaattcgctatatttgaagggactaaaatcatattt 34904563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 37536117 - 37536084
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  37536117 atatttgcagggaccaaaaccatattttagcctt 37536084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 39439955 - 39439922
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  39439955 atatttgcagggaccaaaatcatattttagcctt 39439922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 41846698 - 41846645
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||||||| |  |||||||| ||||||| |||||||||||||| ||||    
T  41846698 gaccaaaatccaaacttactatatttacagggactaaaagcatattttaacctt 41846645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 44997962 - 44997929
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  44997962 atatttgcagggaccaaaatcatattttagcctt 44997929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 45516448 - 45516399
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||||||| ||||||||||||||||| || |||| |||| ||||||||||    
T  45516448 gaccaaaacccaaattcgctatatttacatggactaaaaacatattttag 45516399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 3512235 - 3512267
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  3512235 atatttgcagggaccaaaaccatattttagcct 3512267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 5357454 - 5357422
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  5357454 atatttgcagggaccaaaatcatattttagcct 5357422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 9496372 - 9496340
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  9496372 atatttgcagggaccaaaaccatattttagcct 9496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 10337150 - 10337118
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  10337150 atatttgcagggaccaaaaccatattttagcct 10337118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 10337418 - 10337450
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  10337418 atatttgcagggaccaaaaccatattttagcct 10337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 11019826 - 11019858
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  11019826 atatttgcagggaccaaaaccatattttagcct 11019858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 17073838 - 17073806
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  17073838 atatttgcagggaccaaaaccatattttagcct 17073806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 17574432 - 17574464
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  17574432 atatttgcagggaccaaaaccatattttagcct 17574464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 25600261 - 25600229
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  25600261 atatttgcagggaccaaaaccatattttagcct 25600229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 25702778 - 25702810
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  25702778 atatttgcagggaccaaaaccatattttagcct 25702810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 28346727 - 28346759
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  28346727 atatttgcagggaccaaaaccatattttagcct 28346759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 32726240 - 32726272
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  32726240 atatttgcagggaccaaaaccatattttagcct 32726272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 35097359 - 35097327
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  35097359 atatttgcagggaccaaaaccatattttagcct 35097327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 35346967 - 35346999
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  35346967 atatttgcagggaccaaaaccatattttagcct 35346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 25979253 - 25979313
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  25979253 accagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcctta 25979313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 1778792 - 1778849
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  1778792 accaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttagcc 1778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 1777526 - 1777467
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| |||||||||  |||| |||||||||||||||||||||||| ||||||||||||||    
T  1777526 accagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagcctt 1777467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 2412430 - 2412488
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  2412430 accagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcct 2412488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 23861809 - 23861751
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||| || | ||||||||||||||||||| |||||||||||||    
T  23861809 accagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagcct 23861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 25977927 - 25977869
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| || ||||||||||||||||||||| |||||||||||||    
T  25977927 accagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttagcct 25977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 8810715 - 8810760
Alignment:
Q  322 aaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  8810715 aaaatccaaattcgctatatttgcagagaccaaaaacatattttag 8810760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 11087106 - 11087049
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||| ||||| ||||||||||||||||||  |||| ||||||||||||    
T  11087106 accaaggaccaaaagccaaactcgctatatttgcagggattaaaatcatattttagcc 11087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 12068364 - 12068405
Alignment:
Q  329 aaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  12068364 aaattcgctatatttgcagggatcaaaagcatattttagcct 12068405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 8809654 - 8809594
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgca-gggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||    
T  8809654 accagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagcctt 8809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 372
Target Start/End: Original strand, 3924877 - 3924928
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||| |||| ||||||||| ||| |||||||||||||||||||||    
T  3924877 caaaatccaaactcgccatatttgcaaggagcaaaagcatattttagcctta 3924928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 29794326 - 29794376
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  29794326 accaaaactcaaattcgctatatttgcagggaccaaaa-catattttagcct 29794376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 24754175 - 24754220
Alignment:
Q  327 ccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||    
T  24754175 ccaaattcgccatatttgcagggaccaaaaacatattttaacctta 24754220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 369
Target Start/End: Original strand, 25283290 - 25283331
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  25283290 caaattcgctatatttgcagtgaccaaaaacatattttagcc 25283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 30843701 - 30843640
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||| ||||||||| ||||| ||| ||||||||||| ||  |||||||||||||||||||||    
T  30843701 accagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttagccttat 30843640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 18113120 - 18113084
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttata 374  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18113120 atatttgcagggaccaaaaccatattttagccttata 18113084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 30215453 - 30215413
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  30215453 atatttgcagggaccaaaaccatattttagccttttatata 30215413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 36815804 - 36815844
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  36815804 atatttgcatggaccaaaaccatattttagccttatatata 36815844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 1590907 - 1590962
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||||||||| ||| ||| ||||||| || ||||||||| ||||||||||||||||    
T  1590907 gaccaaaatctaaactcgttatattttcaaggaccaaaaacatattttagccttat 1590962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 16523022 - 16522987
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16523022 atatttgcagggaccaaaaccatattttagccttat 16522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 21573993 - 21573938
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    ||||||||||||||  |||| | |  ||||||||||||||||||||||||||||||    
T  21573993 accaaggaccaaaaatcaaacttgtcatatttgcagggaccaaaagcatattttag 21573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 2481526 - 2481560
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  2481526 atatttgcagggaccaaaaccatattttagcctta 2481560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 4040218 - 4040272
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||| ||| ||||| | |||||| ||||||||||||||||||||| |||||||||    
T  4040218 accagggagcaaaacctaaattctctatatttgcagggaccaaaatcatatttta 4040272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 4423926 - 4423892
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  4423926 atatttgcagggaccaaaaccatattttagcctta 4423892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 11088689 - 11088739
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||  ||||||||||||||||||| |||| |||| ||||||||||||    
T  11088689 accaaaactcaaattcgctatatttgcatggacgaaaaacatattttagcc 11088739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 15842792 - 15842826
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  15842792 atatttgcagggaccaaaaccatattttagcctta 15842826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 370
Target Start/End: Complemental strand, 19603791 - 19603737
Alignment:
Q  316 aggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||| ||||||  | |||||||||||||||||||| ||||||| |||||    
T  19603791 aggaccaaaacccaaatgagttatatttgcagggaccaaaaacatatttaagcct 19603737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 19604921 - 19604987
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||| ||||||||| ||||||  || |||||| |||||||||||| |||||||||||| ||| ||||    
T  19604921 accagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttagccatatttata 19604987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 29859841 - 29859875
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  29859841 atatttgcagggaccaaaaccatattttagcctta 29859875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 36837780 - 36837834
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||| ||||||||| ||||| ||||||||||||||| ||||||||  ||||||||    
T  36837780 accagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 37911089 - 37911123
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  37911089 atatttgcagggaccaaaaccatattttagcctta 37911123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 40125258 - 40125292
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  40125258 atatttgcagggaccaaaatcatattttagcctta 40125292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 43824215 - 43824161
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||  |||||| ||||||||||||||||| |||| ||||||||| ||||    
T  43824215 ggaccaaaactcaaatttgctatatttgcagggacgaaaaacatattttaacctt 43824161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 369
Target Start/End: Complemental strand, 2411295 - 2411262
Alignment:
Q  336 ctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||| |||||||||||||||||    
T  2411295 ctatatttgcagggactaaaagcatattttagcc 2411262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 3172051 - 3172018
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  3172051 atatttgcagggaccaaaatcatattttagcctt 3172018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 4424154 - 4424187
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  4424154 atatttgcagggaccaaaaccatattttagcctt 4424187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 10671662 - 10671629
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||| |||||||||||||    
T  10671662 tatatttgcagggaccaaaaccatattttagcct 10671629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 12067049 - 12067000
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||||  |||||||| |||||||| ||||||||||| |||||||||    
T  12067049 ggaccaaaactcaaattcgttatatttgtagggaccaaaaacatatttta 12067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 14003711 - 14003744
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  14003711 atatttgcagggaccaaaaccatattttagcctt 14003744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 16673442 - 16673409
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  16673442 atatttgcagggaccaaaaccatattttagcctt 16673409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 23861951 - 23861906
Alignment:
Q  173 ccacctggataccacatgtacatgtttgcaccgtcaacatctgcca 218  Q
    |||||||||| ||||||| ||||||||||||  |||||||||||||    
T  23861951 ccacctggatgccacatgaacatgtttgcacaatcaacatctgcca 23861906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 24748251 - 24748210
Alignment:
Q  330 aattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||||||||||| ||||| ||||||| |||||||||||    
T  24748251 aattcgctatatttgctgggactaaaagcacattttagcctt 24748210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 25705116 - 25705083
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  25705116 atatttgcagggaccaaaaccatattttagcctt 25705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 30215839 - 30215872
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||| |||||||||||||    
T  30215839 tatatttgcagggaccaaaaccatattttagcct 30215872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 31644872 - 31644839
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  31644872 atatttgcagggaccaaaaccatattttagcctt 31644839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 33576086 - 33576119
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  33576086 atatttgcagggaccaaaaccatattttagcctt 33576119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 37228764 - 37228731
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  37228764 atatttgcagggaccaaaaccatattttagcctt 37228731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 43672287 - 43672320
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  43672287 atatttgcagggaccaaaatcatattttagcctt 43672320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 10375038 - 10375078
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  10375038 atatttgcagggactaaaaccatattttagccatatatata 10375078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 13215091 - 13215059
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  13215091 atatttgcagggaccaaaaccatattttagcct 13215059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 14003440 - 14003408
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  14003440 atatttgcagggaccaaaaccatattttagcct 14003408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 16523294 - 16523326
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  16523294 atatttgcagggaccaaaaccatattttagcct 16523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 16673740 - 16673772
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  16673740 atatttgcagggaccaaaaccatattttagcct 16673772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 16900175 - 16900219
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataatca 382  Q
    |||||||||||||| |||| ||||||||||||||||  |||||||    
T  16900175 atatttgcagggactaaaaccatattttagccttatcaataatca 16900219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 16993566 - 16993610
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataatca 382  Q
    |||||||||||||| |||| ||||||||||||||||  |||||||    
T  16993566 atatttgcagggactaaaaccatattttagccttatcaataatca 16993610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 20131348 - 20131316
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  20131348 atatttgcagggaccaaaaccatattttagcct 20131316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 24358647 - 24358615
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  24358647 atatttgcagggaccaaaaccatattttagcct 24358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 25705418 - 25705450
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  25705418 atatttgcagggaccaaaaccatattttagcct 25705450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 31909447 - 31909479
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  31909447 atatttgcagggaccaaaaccatattttagcct 31909479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 40302006 - 40301966
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||| |||| |||||||||||||| ||||||    
T  40302006 atatttgcagggactaaaaccatattttagccttttatata 40301966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 41451868 - 41451836
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  41451868 atatttgcagggaccaaaaccatattttagcct 41451836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 44559093 - 44559061
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  44559093 atatttgcagggaccaaaaccatattttagcct 44559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 17281628 - 17281569
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  17281628 accagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcctt 17281569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 17370130 - 17370071
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  17370130 accagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcctt 17370071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 3879143 - 3879085
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3879143 accagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcct 3879085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 42359348 - 42359405
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  42359348 accagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 42359405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 19675627 - 19675679
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  19675627 ggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 19675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 45618342 - 45618284
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  45618342 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattagcct 45618284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 29060884 - 29060943
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||| |||| ||||||||||||||||||  |||| ||||||||||||||    
T  29060884 accaaggaccaaaattcaaactcgctatatttgcagggattaaaaacatattttagcctt 29060943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 41933872 - 41933817
Alignment:
Q  315 aaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||    
T  41933872 aaggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttagcct 41933817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 3880503 - 3880557
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||    
T  3880503 ggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttagcctt 3880557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 17371847 - 17371901
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  17371847 accagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 19674471 - 19674413
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| |||||||||  |||| |||||||||||||| |||||||||||||||||||||||    
T  19674471 accagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttagcct 19674413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 38166552 - 38166494
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||| |||||||||||||    
T  38166552 accaagcaccaaaatccaaactcgctatatttgcagggattaaaaacatattttagcct 38166494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 16573429 - 16573376
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||| |||||||||| ||||||| || |||||||||||||||||||||||    
T  16573429 gaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttagcctt 16573376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 22204112 - 22204055
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  22204112 accagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 22204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 33137230 - 33137291
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||| |||| |||| ||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  33137230 accagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttagccttat 33137291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 32699321 - 32699373
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||    
T  32699321 ggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttagcc 32699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 35054713 - 35054665
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  35054713 gaccaaaacccaaattcgctatatttgcagggactaaaatcatatttta 35054665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 371
Target Start/End: Complemental strand, 34659742 - 34659704
Alignment:
Q  333 tcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  34659742 tcgccatatttgcagggaccaaaagcatattttagcctt 34659704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 44705349 - 44705299
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||| |||||||| |||||||||||| |||||||| ||||||||||||    
T  44705349 accaaaacccaaattcactatatttgcagagaccaaaaacatattttagcc 44705299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 51545661 - 51545619
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagccttatatataa 379  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  51545661 tatatttgcagggactaaaaccatattttagccttatatataa 51545619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 32698039 - 32697994
Alignment:
Q  329 aaattcgctatatttgcagggaccaaaagcatattttagccttata 374  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  32698039 aaattcgctatatttgcagggatcaaaatcatattttagccctata 32697994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 40198631 - 40198575
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| |||||||||||||||||   |||||||||||||||||||    
T  40198631 accagggaccaaaacccaaactcgctatatttgcaggg---aaaagcatattttagcctt 40198575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 47360944 - 47360993
Alignment:
Q  322 aaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  47360944 aaaattcaaattcgctatatttgcaaggatcaaaagcatattttaacctt 47360993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 29597799 - 29597747
Alignment:
Q  314 caaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||||||||||||||| |  ||||||||||||||||| | |||||||||    
T  29597799 caaggaccaaaatccaaattggtcatatttgcagggaccaataacatatttta 29597747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 35119323 - 35119283
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  35119323 atatttgcagggaccaaaaccatattttagccttttatata 35119283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 41935078 - 41935126
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||||||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 13631568 - 13631603
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13631568 atatttgcagggaccaaaaccatattttagccttat 13631603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 17326741 - 17326796
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||| |||||| | ||||||||| ||||||||||| ||||||| |||||||    
T  17326741 ggaccaaaacccaaatgccctatatttggagggaccaaaaccatatttaagcctta 17326796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 29059754 - 29059711
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  29059754 caaattcgttatatttgcagggacgaaaaacatattttagcctt 29059711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 371
Target Start/End: Complemental strand, 42358065 - 42358030
Alignment:
Q  336 ctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||||| ||||||||||||||    
T  42358065 ctatatttgcagggaccaaaaacatattttagcctt 42358030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 54903444 - 54903479
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  54903444 atatttgcagggaccaaaaccatattttagccttat 54903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 371
Target Start/End: Original strand, 5259174 - 5259212
Alignment:
Q  333 tcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  5259174 tcgccatatttgcagggaccaaaaacatattttagcctt 5259212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 22205248 - 22205286
Alignment:
Q  336 ctatatttgcagggaccaaaagcatattttagccttata 374  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  22205248 ctatatttgcagggactaaaagcatattttagccatata 22205286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 25423955 - 25423921
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  25423955 atatttgcagggaccaaaaccatattttagcctta 25423921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 45619733 - 45619791
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||| ||||| | ||| ||||||||||||||||||| |||| |||||||||||||    
T  45619733 accagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttagcct 45619791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 54121702 - 54121760
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| ||||  |||||||||||| ||||| |||||||||||||    
T  54121702 accagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttagcct 54121760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 5827942 - 5827975
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  5827942 atatttgcagggaccaaaaccatattttagcctt 5827975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 6353606 - 6353647
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||||||||| |||||||||||  ||||||||    
T  6353606 tatatttgcagggaccaaaaccatattttagctatatatata 6353647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 13074093 - 13074126
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||| |||||||||||||    
T  13074093 tatatttgcagggaccaaaaccatattttagcct 13074126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 13530682 - 13530715
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  13530682 atatttgcagggaccaaaaccatattttagcctt 13530715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 14791775 - 14791808
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  14791775 atatttgcagggaccaaaaccatattttagcctt 14791808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Original strand, 16574387 - 16574424
Alignment:
Q  329 aaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  16574387 aaattcgctatatttgcagggactaaaaacatatttta 16574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 24774076 - 24774043
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  24774076 atatttgcagggaccaaaaccatattttagcctt 24774043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 25424281 - 25424314
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  25424281 atatttgcagggaccaaaaccatattttagcctt 25424314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 29499213 - 29499180
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  29499213 atatttgcagggaccaaaaccatattttagcctt 29499180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 30046761 - 30046794
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  30046761 atatttgcagggaccaaaaccatattttagcctt 30046794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 30061102 - 30061135
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  30061102 atatttgcagggaccaaaaccatattttagcctt 30061135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 33134943 - 33134890
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||| ||||||| |||  ||||||||||||| ||||| |||||||||||||    
T  33134943 ggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttagcct 33134890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 379
Target Start/End: Complemental strand, 35763678 - 35763637
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataa 379  Q
    |||||||||||||| |||| ||||||||||||| ||||||||    
T  35763678 atatttgcagggactaaaaccatattttagcctaatatataa 35763637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 43231119 - 43231086
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  43231119 atatttgcagggaccaaaaccatattttagcctt 43231086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 43231358 - 43231391
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  43231358 atatttgcagggaccaaaaccatattttagcctt 43231391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 4211592 - 4211560
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  4211592 atatttgcagggaccaaaaccatattttagcct 4211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 11693090 - 11693122
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  11693090 atatttgcagggaccaaaaccatattttagcct 11693122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 12152185 - 12152153
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  12152185 atatttgcagggaccaaaaccatattttagcct 12152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 12152462 - 12152494
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  12152462 atatttgcagggaccaaaaccatattttagcct 12152494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 13631259 - 13631227
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  13631259 atatttgcagggaccaaaaccatattttagcct 13631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 14487833 - 14487801
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  14487833 atatttgcagggaccaaaaccatattttagcct 14487801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 14488156 - 14488188
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  14488156 atatttgcagggaccaaaaccatattttagcct 14488188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 14594237 - 14594205
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  14594237 atatttgcagggaccaaaaccatattttagcct 14594205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 20292017 - 20291985
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  20292017 atatttgcagggaccaaaatcatattttagcct 20291985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 29420506 - 29420538
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  29420506 atatttgcagggaccaaaaccatattttagcct 29420538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 35464049 - 35464017
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  35464049 atatttgcagggaccaaaaccatattttagcct 35464017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 42823807 - 42823775
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  42823807 atatttgcagggaccaaaatcatattttagcct 42823775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 52017536 - 52017500
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttata 374  Q
    |||||||||||||| |||| |||||||||||||||||    
T  52017536 atatttgcagggactaaaaccatattttagccttata 52017500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 53717143 - 53717183
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  53717143 atatttgcagggactaaaaccatattttagccatatatata 53717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 53915714 - 53915682
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  53915714 atatttgcagggaccaaaaccatattttagcct 53915682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 53916016 - 53916048
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  53916016 atatttgcagggaccaaaaccatattttagcct 53916048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 9979 - 9921
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9979 accagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcct 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 47433811 - 47433877
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  47433811 accagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttagcctaatatata 47433877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 46026128 - 46026075
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  46026128 ggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcct 46026075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 46027419 - 46027478
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  46027419 accagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttagcctt 46027478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 52708625 - 52708676
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  52708625 gaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 52708676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 39820606 - 39820664
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  39820606 accagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttagcct 39820664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 40476272 - 40476222
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 52403126 - 52403184
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  52403126 accagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcct 52403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 20585651 - 20585704
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  20585651 ggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttagcct 20585704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 43641200 - 43641143
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  43641200 accagggaccataatccaaactcgctatatttgcagggactaaaagcatattttagcc 43641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 54437474 - 54437527
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  54437474 ggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcct 54437527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 42446577 - 42446525
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcct 42446525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 44507808 - 44507860
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  44507808 accaaaattcaaactcgctatatttgcagggaccaaaatcatattttagcctt 44507860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 52401074 - 52401014
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||    
T  52401074 accagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcctta 52401014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 53121359 - 53121299
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  53121359 accagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcctta 53121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 976820 - 976773
Alignment:
Q  329 aaattcgctatatttgcagggaccaaaagcatattttagccttatata 376  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  976820 aaattcgctatatttgcagggatcaaaagcatattttagcctaatata 976773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 22508792 - 22508738
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    ||||||||||||||  |||| |||||||||||||||||||||||| |||||||||    
T  22508792 accaaggaccaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 40477381 - 40477435
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||    
T  40477381 ggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttagcctt 40477435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 977848 - 977905
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||| ||||| |||  ||||||||||||||||||||||||||| ||||    
T  977848 accaaggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatatttcagcc 977905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 9855230 - 9855178
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||    
T  9855230 ggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagcc 9855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 52707588 - 52707528
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttatatat 377  Q
    |||||||||  ||||||||||||||||||| ||||||||| ||||||||| ||| ||||||    
T  52707588 ggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatattttaacctaatatat 52707528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 20488423 - 20488368
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||| ||||||||| |||||||| | ||||||||||||||||||| ||||||||||    
T  20488423 accagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttag 20488368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 39819369 - 39819314
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    |||| |||||||||| |||| ||||||||||||||||||| |||| ||||||||||    
T  39819369 accagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 11914842 - 11914888
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatatttt 365  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  11914842 accaaaacccaaattcgctatatttgcagggactaaaagcacatttt 11914888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 35639562 - 35639504
Alignment:
Q  314 caaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||  |||| | ||||||||| || |||||||||||||||||||||||||    
T  35639562 caaggaccaaaactcaaacttgctatattttcaaggaccaaaagcatattttagcctta 35639504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 380
Target Start/End: Complemental strand, 47336259 - 47336217
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataat 380  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  47336259 atatttgcagggaccaaaaccatattttagccttaaatataat 47336217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 48033115 - 48033053
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttata 374  Q
    |||| ||||||||||||||| || | ||||||||| ||||||||| |||||||||||| ||||    
T  48033115 accagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttagccatata 48033053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 379
Target Start/End: Complemental strand, 474075 - 474034
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataa 379  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  474075 atatttgcagggaccaaaaccatattttagccttatgtataa 474034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 4705738 - 4705681
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| | ||| |||| ||||||||||||| ||||||||||||||||||    
T  4705738 accagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagcc 4705681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 32637197 - 32637246
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    ||||||| ||||| |||||| |||| ||||||||||||||||||||||||    
T  32637197 accaaaacccaaactcgctacatttacagggaccaaaagcatattttagc 32637246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 38505586 - 38505639
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||  |||| |||| ||||||||||||| |||||||||||||||||||    
T  38505586 ggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttagcct 38505639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 369
Target Start/End: Complemental strand, 46104384 - 46104343
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  46104384 caaactcgctatatttgcagggaccaaaatcatattttagcc 46104343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 3416552 - 3416492
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||| ||||| | ||||||||| |||||| ||||| |||||||||||||||    
T  3416552 accagggaccaaaaaccaaacttgctatatttacagggatcaaaatcatattttagcctta 3416492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 20489360 - 20489416
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||| ||||||||| ||||| |||  ||||||||||||||||||| |||||||||||    
T  20489360 accagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 45267362 - 45267306
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||| |||||||||  |||| |||||||||||||||||| ||||| |||||||||||    
T  45267362 accagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttagc 45267306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 48035734 - 48035790
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||| ||||||||||||||| |||  ||||||||||||| ||||| |||||||||||    
T  48035734 accagggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttagc 48035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 53122497 - 53122533
Alignment:
Q  336 ctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||||||||||||||| ||||||||||||||||||||    
T  53122497 ctatatttgcagggactaaaagcatattttagcctta 53122533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 21553920 - 21553885
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttat 373  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21553920 atatttgcagggaccaaaaccatattttagccttat 21553885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 377
Target Start/End: Complemental strand, 35177286 - 35177247
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatat 377  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  35177286 atatttgcagggaccaaaatcatattttagccttttatat 35177247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 376
Target Start/End: Original strand, 2486871 - 2486909
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatata 376  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  2486871 atatttgcagggaccaaaaccatattttagtcttatata 2486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 14772242 - 14772208
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  14772242 atatttgcagggaccaaaaccatattttagcctta 14772208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 15782727 - 15782765
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  15782727 caaattcgctatatttgtagggaccaaaaacatatttta 15782765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 376
Target Start/End: Original strand, 35569105 - 35569143
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatata 376  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  35569105 atatttgcagggaccaaaaccatattttaaccttatata 35569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 38232272 - 38232238
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  38232272 atatttgcagggaccaaaatcatattttagcctta 38232238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 45268572 - 45268630
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| | ||||||||||||||||  |||| |||||||||||||    
T  45268572 accagggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttagcct 45268630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 1721421 - 1721454
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  1721421 atatttgcagggaccaaaaccatattttagcctt 1721454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 12741240 - 12741273
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  12741240 atatttgcagggaccaaaaccatattttagcctt 12741273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 19844550 - 19844583
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  19844550 atatttgcagggaccaaaaccatattttagcctt 19844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 20405191 - 20405224
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||| |||||||||||||    
T  20405191 tatatttgcagggaccaaaaccatattttagcct 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 25616006 - 25615973
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  25616006 atatttgcagggaccaaaaccatattttagcctt 25615973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 28552352 - 28552389
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatat 375  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  28552352 atatttgcagggaccaaaaccatattttagcctaatat 28552389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 30106188 - 30106221
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||| |||||||||||||    
T  30106188 tatatttgcagggaccaaaaccatattttagcct 30106221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 31480167 - 31480134
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  31480167 atatttgcagggaccaaaaccatattttagcctt 31480134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 32119553 - 32119586
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  32119553 atatttgcagggaccaaaatcatattttagcctt 32119586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 43734049 - 43734102
Alignment:
Q  318 gaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||||||| ||||| | |||||||||||| | |||||| |||||||||||||||    
T  43734049 gaccaaaacccaaacttgctatatttgcaagaaccaaacgcatattttagcctt 43734102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 47005185 - 47005152
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  47005185 atatttgcagggaccaaaaccatattttagcctt 47005152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 47114518 - 47114485
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  47114518 atatttgcagggaccaaaatcatattttagcctt 47114485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 51004194 - 51004141
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||| |||||||||| |||||| ||||| | |||| |||||||||||||    
T  51004194 ggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttagcct 51004141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 53113474 - 53113441
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  53113474 atatttgcagggaccaaaaccatattttagcctt 53113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 54608549 - 54608516
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  54608549 atatttgcagggaccaaaaccatattttagcctt 54608516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 474377 - 474409
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  474377 atatttgcagggaccaaaaccatattttagcct 474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 9262124 - 9262156
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  9262124 atatttgcagggaccaaaaccatattttagcct 9262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 9603888 - 9603920
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  9603888 atatttgcagggaccaaaaccatattttagcct 9603920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 12740938 - 12740906
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  12740938 atatttgcagggaccaaaaccatattttagcct 12740906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 15782256 - 15782216
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||| ||||||||||||||||||||||||  ||||||||||    
T  15782256 caaactcgctatatttgcagggaccaaaaatatattttagc 15782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 28552052 - 28552020
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  28552052 atatttgcagggaccaaaaccatattttagcct 28552020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 29445985 - 29445945
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  29445985 atatttgcagggactaaaatcatattttagccatatatata 29445945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 29490712 - 29490744
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  29490712 atatttgcagggaccaaaaccatattttagcct 29490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 32635651 - 32635591
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctta 372  Q
    |||| ||||||||| ||||| ||||||||||| || |||| ||||  ||||||||||||||    
T  32635651 accagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttagcctta 32635591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 39132875 - 39132907
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  39132875 atatttgcagggaccaaaaccatattttagcct 39132907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 40545595 - 40545563
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  40545595 atatttgcagggaccaaaaccatattttagcct 40545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 45002052 - 45002020
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  45002052 atatttgcagggaccaaaaccatattttagcct 45002020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 47005488 - 47005520
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  47005488 atatttgcagggaccaaaaccatattttagcct 47005520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 47336550 - 47336582
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  47336550 atatttgcagggaccaaaaccatattttagcct 47336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 48924209 - 48924245
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttata 374  Q
    |||||| |||||||||||| |||||||||||||||||    
T  48924209 atatttacagggaccaaaaccatattttagccttata 48924245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 51550113 - 51550081
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  51550113 atatttgcagggaccaaaaccatattttagcct 51550081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 51550415 - 51550447
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  51550415 atatttgcagggaccaaaaccatattttagcct 51550447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 52342226 - 52342194
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  52342226 atatttgcagggaccaaaaccatattttagcct 52342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 54608832 - 54608864
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  54608832 atatttgcagggaccaaaaccatattttagcct 54608864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 202631 - 202578
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  202631 ggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcct 202578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 345904 - 345957
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  345904 ggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcct 345957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 376381 - 376429
Alignment:
Q  322 aaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 374387 - 374335
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    ||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||    
T  374387 ggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttagcc 374335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 344994 - 344936
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||||| ||||||| |||||    
T  344994 accagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatatttgagcct 344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 119650 - 119593
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  119650 accagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 119593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 120987 - 121044
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  120987 accagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttagcc 121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 3936635 - 3936576
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  3936635 accagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcctt 3936576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 34911839 - 34911889
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  34911839 caaaatccaaactcgctatatttgcagggaccaaaatcatattttagcctt 34911889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 3954139 - 3954051
Alignment:
Q  282 ttttgcagggacatttttcaannnnnnnnnaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||||||||||||||||||||         |||| ||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||    
T  3954139 ttttgcagggacatttttcaatttttttttaccagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttagcct 3954051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 15599817 - 15599764
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  15599817 ggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttagcct 15599764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 14809215 - 14809159
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttat 373  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||    
T  14809215 ggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttaggcttat 14809159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 27571131 - 27571190
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcctt 371  Q
    |||| ||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  27571131 accagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcctt 27571190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 370
Target Start/End: Complemental strand, 31540546 - 31540495
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  31540546 accaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcct 31540495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 24443411 - 24443371
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24443411 atatttgcagggaccaaaaccatattttagccttatatata 24443371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 3938062 - 3938120
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| | ||| | ||||||||||||||||| ||||||||||||||||||    
T  3938062 accagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttagcct 3938120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 4565450 - 4565392
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| |||||||||||| |||||| |||| |||||||||||||    
T  4565450 accagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttagcct 4565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 18258193 - 18258157
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttata 374  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18258193 atatttgcagggaccaaaaccatattttagccttata 18258157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 4736511 - 4736554
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataatc 381  Q
    ||||||||||||||||||| ||||||||||||||| || |||||    
T  4736511 atatttgcagggaccaaaaccatattttagccttaaatttaatc 4736554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 1381580 - 1381614
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  1381580 atatttgcagggaccaaaaccatattttagcctta 1381614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 4777697 - 4777639
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||| |  ||||||||||| |||| |||||||||||| |||||    
T  4777697 accagggaccaaaatccaaacttactatatttgcaaggactaaaagcatatttaagcct 4777639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 5917429 - 5917463
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  5917429 atatttgcagggaccaaaaccatattttagcctta 5917463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 24443713 - 24443754
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatataat 380  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  24443713 atatttgcagggaccaaaaccatattttagcc-tatatataat 24443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 25254158 - 25254188
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttag 367  Q
    |||||||||||||||||||||||||||||||    
T  25254158 tatatttgcagggaccaaaagcatattttag 25254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 367
Target Start/End: Original strand, 25317948 - 25317978
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttag 367  Q
    |||||||||||||||||||||||||||||||    
T  25317948 tatatttgcagggaccaaaagcatattttag 25317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 367
Target Start/End: Complemental strand, 27570104 - 27570058
Alignment:
Q  321 caaaatccaaattcgctatatttgcagggaccaaaagcatattttag 367  Q
    ||||| ||||| |||||||||||||| ||||||||| ||||||||||    
T  27570104 caaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 374
Target Start/End: Original strand, 31541624 - 31541686
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccttata 374  Q
    |||| |||| |||| | ||||||| |||||||||||||| ||||| |||||||||||| ||||    
T  31541624 accagggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttagccatata 31541686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 40764446 - 40764412
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctta 372  Q
    ||||||||||||||||||| |||||||||||||||    
T  40764446 atatttgcagggaccaaaaccatattttagcctta 40764412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 1381278 - 1381245
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  1381278 atatttgcagggaccaaaaccatattttagcctt 1381245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 17070566 - 17070533
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  17070566 atatttgcagggaccaaaaccatattttagcctt 17070533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 18258496 - 18258529
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  18258496 atatttgcagggaccaaaaccatattttagcctt 18258529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 19565498 - 19565465
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  19565498 atatttgcagggaccaaaaccatattttagcctt 19565465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 19685349 - 19685382
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  19685349 atatttgcagggaccaaaaccatattttagcctt 19685382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 20660979 - 20660946
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  20660979 atatttgcagggaccaaaaccatattttagcctt 20660946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 20986058 - 20986091
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  20986058 atatttgcagggaccaaaaccatattttagcctt 20986091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 28213404 - 28213371
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  28213404 atatttgcagggaccaaaaccatattttagcctt 28213371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 35876719 - 35876686
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  35876719 atatttgcagggaccaaaaccatattttagcctt 35876686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 35928095 - 35928062
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  35928095 atatttgcagggaccaaaaccatattttagcctt 35928062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 37271675 - 37271708
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  37271675 atatttgcagggaccaaaaccatattttagcctt 37271708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 38170545 - 38170512
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  38170545 atatttgcagggaccaaaaccatattttagcctt 38170512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 1104889 - 1104857
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  1104889 atatttgcagggaccaaaaccatattttagcct 1104857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 1105117 - 1105149
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  1105117 atatttgcagggaccaaaaccatattttagcct 1105149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 5917157 - 5917125
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  5917157 atatttgcagggaccaaaaccatattttagcct 5917125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 19565800 - 19565832
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  19565800 atatttgcagggaccaaaaccatattttagcct 19565832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 19685048 - 19685016
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  19685048 atatttgcagggaccaaaaccatattttagcct 19685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 20690764 - 20690732
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  20690764 atatttgcagggaccaaaaccatattttagcct 20690732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 21050882 - 21050922
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttatatata 378  Q
    |||||||||||||| |||| |||||||||||| ||||||||    
T  21050882 atatttgcagggactaaaaccatattttagccatatatata 21050922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 32108839 - 32108807
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  32108839 atatttgcagggaccaaaaccatattttagcct 32108807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 35877021 - 35877053
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  35877021 atatttgcagggaccaaaaccatattttagcct 35877053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 38496751 - 38496787
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttata 374  Q
    |||||||||||||| |||| |||||||||||||||||    
T  38496751 atatttgcagggactaaaaccatattttagccttata 38496787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 29786 - 29728
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  29786 accagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttagcct 29728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 30909 - 30967
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 370  Q
    |||| ||||||||| ||||| || ||||||||||||||||||||| |||||||||||||    
T  30909 accagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttagcct 30967  T

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Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 433 - 490
Alignment:
Q  312 accaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 369  Q
    |||| ||||||||| ||||| || ||||||||||||||||||||| ||||||||||||    
T  433 accagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 490  T

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Target: scaffold0599 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 6593 - 6639
Alignment:
Q  319 accaaaatccaaattcgctatatttgcagggaccaaaagcatatttt 365  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  6593 accaaaacccaaattcgctatatttgcagggactaaaagcacatttt 6639  T

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Target: scaffold0095 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 42762 - 42813
Alignment:
Q  317 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagc 368  Q
    |||||||||  |||| |||| ||||||||| |||||||||||||||||||||    
T  42762 ggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 42813  T

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Target: scaffold0765 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 1901 - 1863
Alignment:
Q  328 caaattcgctatatttgcagggaccaaaagcatatttta 366  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  1901 caaactcgctatatttgcagggaccaaaatcatatttta 1863  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 82371 - 82338
Alignment:
Q  339 tatttgcagggaccaaaagcatattttagcctta 372  Q
    |||||||||||||||||| |||||||||||||||    
T  82371 tatttgcagggaccaaaaccatattttagcctta 82338  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 82675 - 82707
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  82675 atatttgcagggaccaaaaccatattttagcct 82707  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 47956 - 47923
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcctt 371  Q
    ||||||||||||||||||| ||||||||||||||    
T  47956 atatttgcagggaccaaaaccatattttagcctt 47923  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 223141 - 223173
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  223141 atatttgcagggaccaaaaccatattttagcct 223173  T

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Target: scaffold0684 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 2629 - 2661
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  2629 atatttgcagggaccaaaaccatattttagcct 2661  T

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Target: scaffold0370 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 258 - 294
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagccttata 374  Q
    |||||||||||||| |||| |||||||||||||||||    
T  258 atatttgcagggactaaaaccatattttagccttata 294  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 27333 - 27365
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  27333 atatttgcagggaccaaaaccatattttagcct 27365  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Complemental strand, 16756 - 16724
Alignment:
Q  337 tatatttgcagggaccaaaagcatattttagcc 369  Q
    |||||||||||||||||||| ||||||||||||    
T  16756 tatatttgcagggaccaaaatcatattttagcc 16724  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 3783 - 3751
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  3783 atatttgcagggaccaaaaccatattttagcct 3751  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 75733 - 75765
Alignment:
Q  338 atatttgcagggaccaaaagcatattttagcct 370  Q
    ||||||||||||||||||| |||||||||||||    
T  75733 atatttgcagggaccaaaaccatattttagcct 75765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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