View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20165_low_15 (Length: 367)

Name: NF20165_low_15
Description: NF20165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20165_low_15
NF20165_low_15
[»] chr8 (19 HSPs)
chr8 (11-357)||(5436335-5436678)
chr8 (126-227)||(2816283-2816384)
chr8 (320-358)||(16918493-16918531)
chr8 (320-357)||(1064967-1065004)
chr8 (320-357)||(1928585-1928622)
chr8 (320-357)||(11523721-11523758)
chr8 (320-357)||(14742080-14742117)
chr8 (320-357)||(21121392-21121429)
chr8 (320-357)||(24837938-24837975)
chr8 (320-357)||(30198264-30198301)
chr8 (320-357)||(35324020-35324057)
chr8 (320-357)||(36545396-36545433)
chr8 (320-357)||(39651026-39651063)
chr8 (320-357)||(41031418-41031455)
chr8 (320-357)||(41031524-41031561)
chr8 (320-357)||(44047530-44047567)
chr8 (321-357)||(2027778-2027814)
chr8 (320-356)||(4558207-4558243)
chr8 (320-356)||(25473402-25473438)
[»] chr2 (25 HSPs)
chr2 (320-363)||(10403885-10403928)
chr2 (320-359)||(12520058-12520097)
chr2 (320-357)||(227436-227473)
chr2 (320-357)||(451646-451683)
chr2 (320-357)||(3635321-3635358)
chr2 (320-357)||(4807842-4807879)
chr2 (320-357)||(7326158-7326195)
chr2 (320-357)||(9496113-9496150)
chr2 (320-357)||(9531598-9531635)
chr2 (320-357)||(12489800-12489837)
chr2 (320-357)||(12734947-12734984)
chr2 (320-357)||(13188389-13188426)
chr2 (320-357)||(17670715-17670752)
chr2 (320-357)||(25834925-25834962)
chr2 (320-357)||(30306279-30306316)
chr2 (320-357)||(35643195-35643232)
chr2 (320-357)||(37520693-37520730)
chr2 (320-357)||(38328368-38328405)
chr2 (320-357)||(38429656-38429693)
chr2 (320-357)||(43573128-43573165)
chr2 (320-357)||(44437719-44437756)
chr2 (321-357)||(1648112-1648148)
chr2 (321-357)||(14444917-14444953)
chr2 (320-356)||(28508925-28508961)
chr2 (321-357)||(42543483-42543519)
[»] chr3 (24 HSPs)
chr3 (321-363)||(43529294-43529336)
chr3 (320-355)||(52882662-52882697)
chr3 (319-357)||(21000717-21000755)
chr3 (321-359)||(23610928-23610966)
chr3 (320-357)||(311307-311344)
chr3 (320-357)||(2133610-2133647)
chr3 (320-357)||(5169079-5169116)
chr3 (320-357)||(12096703-12096740)
chr3 (323-360)||(24084317-24084354)
chr3 (320-357)||(35701096-35701133)
chr3 (320-357)||(40273203-40273240)
chr3 (320-357)||(45374475-45374512)
chr3 (320-357)||(45834598-45834635)
chr3 (320-357)||(47555330-47555367)
chr3 (320-357)||(48259951-48259988)
chr3 (320-357)||(48508482-48508519)
chr3 (320-357)||(48532205-48532242)
chr3 (320-357)||(50631879-50631916)
chr3 (320-357)||(52139047-52139084)
chr3 (320-357)||(53262388-53262425)
chr3 (320-356)||(31454224-31454260)
chr3 (320-356)||(37083291-37083327)
chr3 (320-356)||(39512790-39512826)
chr3 (320-356)||(54128626-54128662)
[»] chr4 (27 HSPs)
chr4 (320-357)||(21237105-21237142)
chr4 (318-357)||(49454477-49454516)
chr4 (320-362)||(32633399-32633441)
chr4 (319-357)||(55088569-55088607)
chr4 (320-357)||(436476-436513)
chr4 (320-357)||(8327148-8327185)
chr4 (320-357)||(12494910-12494947)
chr4 (320-357)||(19154861-19154898)
chr4 (320-357)||(21528535-21528572)
chr4 (320-357)||(29399051-29399088)
chr4 (320-357)||(30634104-30634141)
chr4 (320-357)||(39100534-39100571)
chr4 (320-357)||(45209203-45209240)
chr4 (320-357)||(46153955-46153992)
chr4 (320-357)||(48174091-48174128)
chr4 (320-357)||(50238613-50238650)
chr4 (320-357)||(50238699-50238736)
chr4 (320-357)||(50869878-50869915)
chr4 (320-357)||(52569513-52569550)
chr4 (320-357)||(55007993-55008030)
chr4 (320-357)||(56130417-56130454)
chr4 (320-357)||(56225315-56225352)
chr4 (321-357)||(8286687-8286723)
chr4 (320-356)||(15665348-15665384)
chr4 (320-356)||(22420716-22420752)
chr4 (321-357)||(26772535-26772571)
chr4 (321-357)||(37488339-37488375)
[»] chr7 (29 HSPs)
chr7 (320-362)||(14593999-14594041)
chr7 (320-362)||(16013522-16013564)
chr7 (320-358)||(28355413-28355451)
chr7 (320-357)||(2885720-2885757)
chr7 (320-357)||(11594207-11594244)
chr7 (320-357)||(12841273-12841310)
chr7 (320-357)||(28208326-28208363)
chr7 (320-357)||(29650631-29650668)
chr7 (320-357)||(31005452-31005489)
chr7 (320-357)||(31682600-31682637)
chr7 (320-357)||(32631811-32631848)
chr7 (320-357)||(36101775-36101812)
chr7 (320-357)||(37618192-37618229)
chr7 (320-357)||(39906370-39906407)
chr7 (320-357)||(40630681-40630718)
chr7 (320-357)||(43281921-43281958)
chr7 (320-357)||(43423989-43424026)
chr7 (320-357)||(43491555-43491592)
chr7 (320-357)||(44855172-44855209)
chr7 (320-357)||(47413713-47413750)
chr7 (320-357)||(48735899-48735936)
chr7 (320-356)||(1011293-1011329)
chr7 (321-357)||(20899419-20899455)
chr7 (320-356)||(21244282-21244318)
chr7 (320-356)||(27649027-27649063)
chr7 (320-356)||(31869101-31869137)
chr7 (320-356)||(33650869-33650905)
chr7 (321-357)||(35725569-35725605)
chr7 (320-356)||(47652794-47652830)
[»] chr1 (25 HSPs)
chr1 (320-358)||(14224331-14224369)
chr1 (322-360)||(43375593-43375631)
chr1 (320-357)||(696517-696554)
chr1 (320-357)||(1210992-1211029)
chr1 (320-357)||(2914121-2914158)
chr1 (320-357)||(4001453-4001490)
chr1 (320-357)||(4318843-4318880)
chr1 (320-357)||(4707219-4707256)
chr1 (320-357)||(7133300-7133337)
chr1 (320-357)||(7913781-7913818)
chr1 (320-357)||(8809499-8809536)
chr1 (320-357)||(15086169-15086206)
chr1 (320-357)||(25979229-25979266)
chr1 (320-357)||(29577499-29577536)
chr1 (320-357)||(30202128-30202165)
chr1 (320-357)||(34444603-34444640)
chr1 (320-357)||(37311753-37311790)
chr1 (320-357)||(38758018-38758055)
chr1 (320-357)||(38807669-38807706)
chr1 (320-357)||(41165529-41165566)
chr1 (320-357)||(41560476-41560513)
chr1 (320-357)||(43481796-43481833)
chr1 (320-357)||(44941774-44941811)
chr1 (320-357)||(51602303-51602340)
chr1 (320-356)||(8796456-8796492)
[»] scaffold0168 (1 HSPs)
scaffold0168 (320-357)||(28887-28924)
[»] scaffold0157 (1 HSPs)
scaffold0157 (320-357)||(25530-25567)
[»] scaffold0018 (1 HSPs)
scaffold0018 (320-357)||(31715-31752)
[»] chr6 (4 HSPs)
chr6 (320-357)||(1008050-1008087)
chr6 (320-353)||(7492636-7492669)
chr6 (320-357)||(12890822-12890859)
chr6 (320-357)||(28085623-28085660)
[»] chr5 (11 HSPs)
chr5 (320-357)||(408492-408529)
chr5 (320-357)||(4496631-4496668)
chr5 (320-357)||(12492382-12492419)
chr5 (320-357)||(13606995-13607032)
chr5 (320-357)||(14665959-14665996)
chr5 (320-357)||(28411923-28411960)
chr5 (320-357)||(28976857-28976894)
chr5 (320-357)||(29816629-29816666)
chr5 (320-357)||(29929301-29929338)
chr5 (320-357)||(38830566-38830603)
chr5 (320-356)||(38132583-38132619)


Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 5436335 - 5436678
Alignment:
Q  11 cacagatgtcttgacaacaggagcagtagtatctttaatcgaaacgggagttgcatctttttcatcatccacagtttctttcttctttgtgtttgtcctt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5436335 cacagatgtcttgacaacaggagcagtagtatctttaatcgaaacgggagttgcatctttttcatcatccacagtttctttcttctttgtgtttgtcctt 5436434  T
Q  111 aaagcccaataaactgcagagttcaaacaattatcagtcacatatctagcaacaagttcaagataggttttgacaatagaaattcacttaagtgtactag 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5436435 aaagcccaataaactgcagagttcaaacaattatcagtcacatatctagcaacaagttcaagataggttttgacaatagaaattcacttaagtgaactag 5436534  T
Q  211 agttcggatcagaaaaaccagagttaaatttgatagttaaaaatgtgacatcatgctagcggagaaagtagttcatttaaaatataattgactaatctcg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5436535 agttcggatcagaaaaaccagagttaaatttgatagttaaaaatgtga---catgctagcggagaaagtagttcatttaaaatataattgactaatctcg 5436631  T
Q  311 cggttatataccccacttagtgggagaaggattggttgttgttgttg 357  Q
     |||||||||||||| ||||||||| |||||||||||||||||||||    
T  5436632 tggttatataccccagttagtgggataaggattggttgttgttgttg 5436678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 2816283 - 2816384
Alignment:
Q  126 gcagagttcaaacaattatcagtcacatatctagcaacaagttcaagataggttttgacaatagaaattcacttaagtgtactagagttcggatcagaaa 225  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||  |||||||||  ||||||||  ||| || || |||||||||  |||||||||    
T  2816283 gcagagttcagacaatcatcagtcacatgtctagcaacaagttcaagtcaggttttgaacatagaaataaactcaaatgcactagagttgagatcagaaa 2816382  T
Q  226 aa 227  Q
    ||    
T  2816383 aa 2816384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 16918531 - 16918493
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttga 358  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  16918531 accccacttagtgggataaggcttggttgttgttgttga 16918493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 1064967 - 1065004
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1064967 accccacttagtgggataaggcttggttgttgttgttg 1065004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 1928622 - 1928585
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1928622 accccacttagtgggataaggcttggttgttgttgttg 1928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 11523758 - 11523721
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  11523758 accccacttagtgggataaggcttggttgttgttgttg 11523721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 14742117 - 14742080
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  14742117 accccacttagtgggataaggcttggttgttgttgttg 14742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 21121392 - 21121429
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  21121392 accccacttagtgggaaaaggcttggttgttgttgttg 21121429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 24837938 - 24837975
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  24837938 accccacttagtgggataaggcttggttgttgttgttg 24837975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 30198301 - 30198264
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  30198301 accccacttagtgggataaggcttggttgttgttgttg 30198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 35324020 - 35324057
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  35324020 accccacttagtgggataaggcttggttgttgttgttg 35324057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 36545396 - 36545433
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  36545396 accccacttagtgggataaggcttggttgttgttgttg 36545433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 39651063 - 39651026
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  39651063 accccacttagtgggataaggcttggttgttgttgttg 39651026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 41031455 - 41031418
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  41031455 accccacttagtgggataaggcttggttgttgttgttg 41031418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 41031561 - 41031524
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  41031561 accccacttagtgggataaggcttggttgttgttgttg 41031524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 44047567 - 44047530
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  44047567 accccacttagtgggataaggcttggttgttgttgttg 44047530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 2027778 - 2027814
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  2027778 ccccacttagtgggataaggcttggttgttgttgttg 2027814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 4558243 - 4558207
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  4558243 accccacttagtgggataaggcttggttgttgttgtt 4558207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 25473438 - 25473402
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  25473438 accccacttagtgggataaggcttggttgttgttgtt 25473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 10403928 - 10403885
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttgatgatg 363  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  10403928 accccacttagtgggataaggcttggttgttgttgttgatgatg 10403885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 12520097 - 12520058
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttgat 359  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  12520097 accccacttagtgggataaggcttggttgttgttgttgat 12520058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 227436 - 227473
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  227436 accccacttagtgggataaggcttggttgttgttgttg 227473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 451683 - 451646
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  451683 accccacttagtgggacaaggcttggttgttgttgttg 451646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 3635358 - 3635321
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  3635358 accccacttagtgggataaggcttggttgttgttgttg 3635321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 4807842 - 4807879
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  4807842 accccacttagtgggataaggcttggttgttgttgttg 4807879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 7326195 - 7326158
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  7326195 accccacttagtgggataaggcttggttgttgttgttg 7326158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 9496113 - 9496150
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  9496113 accccacttagtgggacaaggcttggttgttgttgttg 9496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 9531635 - 9531598
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  9531635 accccacttagtgggataaggcttggttgttgttgttg 9531598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 12489837 - 12489800
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12489837 accccacttagtgggataaggcttggttgttgttgttg 12489800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 12734947 - 12734984
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12734947 accccacttagtgggataaggcttggttgttgttgttg 12734984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 13188389 - 13188426
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  13188389 accccacttagtgggataaggcttggttgttgttgttg 13188426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 17670715 - 17670752
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  17670715 accccacttagtgggataaggcttggttgttgttgttg 17670752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 25834925 - 25834962
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  25834925 accccacttagtgggataaggcttggttgttgttgttg 25834962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 30306279 - 30306316
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  30306279 accccacttagtgggataaggcttggttgttgttgttg 30306316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 35643195 - 35643232
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  35643195 accccacttagtgggataaggcttggttgttgttgttg 35643232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 37520693 - 37520730
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  37520693 accccacttagtgggataaggcttggttgttgttgttg 37520730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 38328405 - 38328368
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  38328405 accccacttagtgggataaggcttggttgttgttgttg 38328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 38429656 - 38429693
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  38429656 accccacttagtgggataaggcttggttgttgttgttg 38429693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 43573165 - 43573128
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  43573165 accccacttagtgggataaggcttggttgttgttgttg 43573128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 44437756 - 44437719
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  44437756 accccacttagtgggataaggcttggttgttgttgttg 44437719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 1648112 - 1648148
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  1648112 ccccacttagtgggataaggcttggttgttgttgttg 1648148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 14444917 - 14444953
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  14444917 ccccacttagtgggataaggcttggttgttgttgttg 14444953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 28508925 - 28508961
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  28508925 accccacttagtgggataaggcttggttgttgttgtt 28508961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 42543483 - 42543519
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  42543483 ccccacttagtgggataaggcttggttgttgttgttg 42543519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 43529294 - 43529336
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttgatgatg 363  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  43529294 ccccacttagtgggataaggcttggttgttgttgttgatgatg 43529336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 52882697 - 52882662
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgt 355  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52882697 accccacttagtgggagaaggcttggttgttgttgt 52882662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 21000717 - 21000755
Alignment:
Q  319 taccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  21000717 taccccacttagtgggataaggtttggttgttgttgttg 21000755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 23610966 - 23610928
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttgat 359  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  23610966 ccccacttagtgggataaggcttggttgttgttgttgat 23610928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 311344 - 311307
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  311344 accccacttagtgggataaggcttggttgttgttgttg 311307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 2133647 - 2133610
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  2133647 accccacttagtgggataaggcttggttgttgttgttg 2133610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 5169079 - 5169116
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  5169079 accccacttagtgggataaggcttggttgttgttgttg 5169116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 12096740 - 12096703
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12096740 accccacttagtgggataaggcttggttgttgttgttg 12096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 24084354 - 24084317
Alignment:
Q  323 ccacttagtgggagaaggattggttgttgttgttgatg 360  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  24084354 ccacttagtgggataaggtttggttgttgttgttgatg 24084317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 35701096 - 35701133
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  35701096 accccacttagtgggataaggcttggttgttgttgttg 35701133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 40273240 - 40273203
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  40273240 accccacttagtgggaaaaggtttggttgttgttgttg 40273203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 45374512 - 45374475
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  45374512 accccacttagtgggataaggcttggttgttgttgttg 45374475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 45834635 - 45834598
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  45834635 accccacttagtgggataaggcttggttgttgttgttg 45834598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 47555367 - 47555330
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  47555367 accccacttagtgggataaggcttggttgttgttgttg 47555330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 48259951 - 48259988
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  48259951 accccacttagtgggataaggcttggttgttgttgttg 48259988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 48508482 - 48508519
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  48508482 accccacttagtgggataaggcttggttgttgttgttg 48508519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 48532205 - 48532242
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  48532205 accccacttagtgggataaggcttggttgttgttgttg 48532242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 50631916 - 50631879
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| || ||||||||||||||||||    
T  50631916 accccacttagtgggataaagattggttgttgttgttg 50631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 52139047 - 52139084
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52139047 accccacttagtgggataaggcttggttgttgttgttg 52139084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 53262388 - 53262425
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  53262388 accccacttagtgggataaggcttggttgttgttgttg 53262425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 31454260 - 31454224
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  31454260 accccacttagtgggataaggcttggttgttgttgtt 31454224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 37083327 - 37083291
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  37083327 accccacttagtgggataaggcttggttgttgttgtt 37083291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 39512790 - 39512826
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  39512790 accccacttagtgggataaggcttggttgttgttgtt 39512826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 54128626 - 54128662
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  54128626 accccacttagtgggataaggcttggttgttgttgtt 54128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 21237105 - 21237142
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21237105 accccacttagtgggataaggattggttgttgttgttg 21237142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 49454516 - 49454477
Alignment:
Q  318 ataccccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  49454516 ataccccacttagtgggataaggcttggttgttgttgttg 49454477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 32633441 - 32633399
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttgatgat 362  Q
    |||||||||||||||| |||| |||||||||||||||| ||||    
T  32633441 accccacttagtgggaaaaggcttggttgttgttgttgttgat 32633399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 55088607 - 55088569
Alignment:
Q  319 taccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  55088607 taccccacttagtggaaaaaggattggttgttgttgttg 55088569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 436476 - 436513
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  436476 accccacttagtgggataaggcttggttgttgttgttg 436513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 8327148 - 8327185
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  8327148 accccacttagtgggataaggcttggttgttgttgttg 8327185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 12494910 - 12494947
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12494910 accccacttagtgggataaggcttggttgttgttgttg 12494947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 19154898 - 19154861
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  19154898 accccacttagtgggataaggcttggttgttgttgttg 19154861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 21528535 - 21528572
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  21528535 accccacttagtgggataaggcttggttgttgttgttg 21528572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 29399051 - 29399088
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  29399051 accccacttagtgggaaaaggcttggttgttgttgttg 29399088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 30634141 - 30634104
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  30634141 accccacttagtgggataaggcttggttgttgttgttg 30634104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 39100571 - 39100534
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  39100571 accccacttagtgggataaggcttggttgttgttgttg 39100534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 45209240 - 45209203
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  45209240 accccacttagtgggataaggcttggttgttgttgttg 45209203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 46153955 - 46153992
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  46153955 accccacttagtgggataaggcttggttgttgttgttg 46153992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 48174128 - 48174091
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  48174128 accccacttagtgggataaggcttggttgttgttgttg 48174091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 50238650 - 50238613
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  50238650 accccacttagtgggataaggcttggttgttgttgttg 50238613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 50238736 - 50238699
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  50238736 accccacttagtgggataaggcttggttgttgttgttg 50238699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 50869915 - 50869878
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  50869915 accccacttagtgggataaggcttggttgttgttgttg 50869878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 52569550 - 52569513
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52569550 accccacttagtgggataaggcttggttgttgttgttg 52569513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 55007993 - 55008030
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  55007993 accccacttagtgggataaggcttggttgttgttgttg 55008030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 56130417 - 56130454
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  56130417 accccacttagtgggataaggcttggttgttgttgttg 56130454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 56225315 - 56225352
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  56225315 accccacttagtgggataaggatcggttgttgttgttg 56225352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 8286687 - 8286723
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  8286687 ccccacttagtgggataaggcttggttgttgttgttg 8286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 15665348 - 15665384
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  15665348 accccacttagtgggataaggcttggttgttgttgtt 15665384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 22420752 - 22420716
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  22420752 accccacttagtgggataaggcttggttgttgttgtt 22420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 26772571 - 26772535
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26772571 ccccacttagtgggataaggcttggttgttgttgttg 26772535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 37488339 - 37488375
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  37488339 ccccacttagtgggataaggcttggttgttgttgttg 37488375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 14593999 - 14594041
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttgatgat 362  Q
    |||||||||||||||| |||| |||||||||||||||| ||||    
T  14593999 accccacttagtgggataaggcttggttgttgttgttgttgat 14594041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 16013522 - 16013564
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttgatgat 362  Q
    |||||||||||||||| |||| |||||||||||||||| ||||    
T  16013522 accccacttagtgggataaggcttggttgttgttgttgttgat 16013564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 28355413 - 28355451
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttga 358  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  28355413 accccacttagtgggataaggcttggttgttgttgttga 28355451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 2885757 - 2885720
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  2885757 accccacttagtgggataaggcttggttgttgttgttg 2885720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 11594207 - 11594244
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  11594207 accccacttagtgggataaggcttggttgttgttgttg 11594244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 12841310 - 12841273
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12841310 accccacttagtgggataaggcttggttgttgttgttg 12841273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 28208363 - 28208326
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28208363 accccacttagtgggataaggcttggttgttgttgttg 28208326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 29650631 - 29650668
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  29650631 accccacttagtgggataaggcttggttgttgttgttg 29650668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 31005452 - 31005489
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  31005452 accccacttagtgggataaggcttggttgttgttgttg 31005489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 31682637 - 31682600
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  31682637 accccacttagtgggataaggcttggttgttgttgttg 31682600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 32631811 - 32631848
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  32631811 accccacttagtgggataaggcttggttgttgttgttg 32631848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 36101812 - 36101775
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  36101812 accccacttagtgggataaggcttggttgttgttgttg 36101775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 37618192 - 37618229
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  37618192 accccacttagtgggataaggcttggttgttgttgttg 37618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 39906407 - 39906370
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  39906407 accccacttagtgggataaggcttggttgttgttgttg 39906370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 40630681 - 40630718
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  40630681 accccacttagtgggaaaaggcttggttgttgttgttg 40630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 43281921 - 43281958
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  43281921 accccacttagtgggacaaggcttggttgttgttgttg 43281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 43424026 - 43423989
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  43424026 accccacttagtgggataaggcttggttgttgttgttg 43423989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 43491555 - 43491592
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  43491555 accccacttagtgggataaggcttggttgttgttgttg 43491592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 44855209 - 44855172
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  44855209 accccacttagtgggataaggcttggttgttgttgttg 44855172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 47413750 - 47413713
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  47413750 accccacttagtgggataaggcttggttgttgttgttg 47413713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 48735936 - 48735899
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  48735936 accccacttagtgggataaggtttggttgttgttgttg 48735899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 1011293 - 1011329
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  1011293 accccacttagtgggataaggcttggttgttgttgtt 1011329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 20899419 - 20899455
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  20899419 ccccacttagtgggataaggcttggttgttgttgttg 20899455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 21244318 - 21244282
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  21244318 accccacttagtgggataaggcttggttgttgttgtt 21244282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 27649027 - 27649063
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  27649027 accccacttagtgggataaggcttggttgttgttgtt 27649063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 31869137 - 31869101
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  31869137 accccacttagtgggataaggcttggttgttgttgtt 31869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 33650905 - 33650869
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  33650905 accccacttagtgggataaggcttggttgttgttgtt 33650869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 35725605 - 35725569
Alignment:
Q  321 ccccacttagtgggagaaggattggttgttgttgttg 357  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  35725605 ccccacttagtgggataaggcttggttgttgttgttg 35725569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 47652794 - 47652830
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  47652794 accccacttagtgggataaggcttggttgttgttgtt 47652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 14224331 - 14224369
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttga 358  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  14224331 accctacttagtgggacaaggattggttgttgttgttga 14224369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 43375631 - 43375593
Alignment:
Q  322 cccacttagtgggagaaggattggttgttgttgttgatg 360  Q
    |||||||||||||| || |||||||||||||||||||||    
T  43375631 cccacttagtgggataaagattggttgttgttgttgatg 43375593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 696517 - 696554
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  696517 accccacttagtgggataaggcttggttgttgttgttg 696554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 1210992 - 1211029
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1210992 accccacttagtgggataaggcttggttgttgttgttg 1211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 2914158 - 2914121
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  2914158 accccacttagtgggataaggcttggttgttgttgttg 2914121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 4001490 - 4001453
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  4001490 accccacttagtgggaaaaggcttggttgttgttgttg 4001453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 4318880 - 4318843
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  4318880 accccacttagtgggaaaaggcttggttgttgttgttg 4318843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 4707256 - 4707219
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  4707256 accccacttagtgggataaggcttggttgttgttgttg 4707219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 7133337 - 7133300
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  7133337 accccacttagtgggaaaaggcttggttgttgttgttg 7133300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 7913818 - 7913781
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  7913818 accccacttagtgggataaggtttggttgttgttgttg 7913781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 8809536 - 8809499
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  8809536 accccacttagtgggataaggcttggttgttgttgttg 8809499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 15086169 - 15086206
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  15086169 accccacttagtgggataaggcttggttgttgttgttg 15086206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 25979266 - 25979229
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  25979266 accccacttagtgggataaggcttggttgttgttgttg 25979229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 29577499 - 29577536
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  29577499 accccacttagtgggataaggcttggttgttgttgttg 29577536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 30202165 - 30202128
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  30202165 accccacttagtgggataaggcttggttgttgttgttg 30202128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 34444603 - 34444640
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  34444603 accccacttagtgggataaggcttggttgttgttgttg 34444640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 37311790 - 37311753
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  37311790 accccacttagtgggaaaaggcttggttgttgttgttg 37311753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 38758055 - 38758018
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  38758055 accccacttagtgggataaggcttggttgttgttgttg 38758018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 38807706 - 38807669
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  38807706 accccacttagtgggataaggcttggttgttgttgttg 38807669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 41165529 - 41165566
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  41165529 accccacttagtgggaaaaggcttggttgttgttgttg 41165566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 41560476 - 41560513
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  41560476 accccacttagtgggataaggcttggttgttgttgttg 41560513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 43481833 - 43481796
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  43481833 accccacttagtgggataaggcttggttgttgttgttg 43481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 44941811 - 44941774
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  44941811 accccacttagtgggataaggcttggttgttgttgttg 44941774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 51602303 - 51602340
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  51602303 accccacttagtgggataaggcttggttgttgttgttg 51602340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 8796456 - 8796492
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  8796456 accccacttagtgggataaggcttggttgttgttgtt 8796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 28924 - 28887
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28924 accccacttagtgggataaggcttggttgttgttgttg 28887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 25567 - 25530
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  25567 accccacttagtgggataaggcttggttgttgttgttg 25530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 31715 - 31752
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  31715 accccacttagtgggataaggcttggttgttgttgttg 31752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 1008087 - 1008050
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1008087 accccacttagtgggaaaaggcttggttgttgttgttg 1008050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 7492636 - 7492669
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgtt 353  Q
    |||||||||||||||| |||||||||||||||||    
T  7492636 accccacttagtgggataaggattggttgttgtt 7492669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 12890822 - 12890859
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12890822 accccacttagtgggataaggcttggttgttgttgttg 12890859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 28085623 - 28085660
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28085623 accccacttagtgggataaggcttggttgttgttgttg 28085660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 408529 - 408492
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  408529 accccacttagtgggataaggcttggttgttgttgttg 408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 4496631 - 4496668
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  4496631 accccacttagtgggataaggcttggttgttgttgttg 4496668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 12492419 - 12492382
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12492419 accccacttagtgggataaggcttggttgttgttgttg 12492382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 13607032 - 13606995
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  13607032 accccacttagtgggataaggcttggttgttgttgttg 13606995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 14665959 - 14665996
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  14665959 accccacttagtgggataaggcttggttgttgttgttg 14665996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 28411923 - 28411960
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28411923 accccacttagtgggataaggcttggttgttgttgttg 28411960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 28976894 - 28976857
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28976894 accccacttagtgggataaggcttggttgttgttgttg 28976857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 29816629 - 29816666
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  29816629 accccacttagtgggataaggcttggttgttgttgttg 29816666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 29929301 - 29929338
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  29929301 accccacttagtgggataaggcttggttgttgttgttg 29929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 38830566 - 38830603
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgttg 357  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  38830566 accccacttagtgggaaaaggtttggttgttgttgttg 38830603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 38132583 - 38132619
Alignment:
Q  320 accccacttagtgggagaaggattggttgttgttgtt 356  Q
    |||||||||||||||| |||| |||||||||||||||    
T  38132583 accccacttagtgggataaggcttggttgttgttgtt 38132619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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