View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20165_low_2 (Length: 692)

Name: NF20165_low_2
Description: NF20165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20165_low_2
NF20165_low_2
[»] chr2 (19 HSPs)
chr2 (39-588)||(29747125-29747674)
chr2 (587-676)||(29747698-29747787)
chr2 (298-426)||(24837425-24837550)
chr2 (272-422)||(38211498-38211645)
chr2 (61-357)||(17863231-17863522)
chr2 (50-123)||(31347405-31347478)
chr2 (50-143)||(38211339-38211432)
chr2 (57-125)||(18010909-18010977)
chr2 (38-122)||(33125407-33125490)
chr2 (37-179)||(24837182-24837323)
chr2 (59-147)||(31314645-31314733)
chr2 (72-197)||(29742295-29742419)
chr2 (38-108)||(33119191-33119260)
chr2 (2-37)||(29747073-29747108)
chr2 (291-364)||(19151-19222)
chr2 (298-364)||(21338681-21338745)
chr2 (291-356)||(6790-6853)
chr2 (301-337)||(33118961-33118997)
chr2 (462-502)||(40565661-40565701)
[»] chr1 (17 HSPs)
chr1 (271-497)||(17762429-17762652)
chr1 (252-427)||(17914464-17914635)
chr1 (50-207)||(17914248-17914405)
chr1 (59-147)||(15088261-15088349)
chr1 (59-147)||(22210869-22210957)
chr1 (59-147)||(22219619-22219707)
chr1 (59-117)||(22207306-22207364)
chr1 (38-144)||(14150122-14150227)
chr1 (59-123)||(7898990-7899054)
chr1 (57-158)||(1944749-1944849)
chr1 (283-358)||(23696137-23696212)
chr1 (57-128)||(7064027-7064098)
chr1 (59-145)||(44193460-44193546)
chr1 (260-353)||(14149917-14150009)
chr1 (59-138)||(1991596-1991675)
chr1 (59-152)||(14115535-14115628)
chr1 (65-128)||(51843949-51844012)
[»] chr7 (10 HSPs)
chr7 (43-358)||(3737661-3737963)
chr7 (63-147)||(19802252-19802336)
chr7 (59-147)||(42786499-42786587)
chr7 (59-147)||(48477399-48477487)
chr7 (49-129)||(20920353-20920433)
chr7 (63-143)||(21959210-21959290)
chr7 (283-358)||(1455108-1455183)
chr7 (59-147)||(3079024-3079112)
chr7 (64-147)||(4340549-4340632)
chr7 (298-354)||(20920122-20920179)
[»] chr4 (16 HSPs)
chr4 (309-427)||(12398808-12398924)
chr4 (38-155)||(1604688-1604804)
chr4 (283-357)||(3329265-3329338)
chr4 (59-147)||(1505339-1505427)
chr4 (59-147)||(2895141-2895229)
chr4 (59-147)||(5908497-5908585)
chr4 (63-152)||(5599255-5599344)
chr4 (59-147)||(13701957-13702045)
chr4 (59-147)||(13712450-13712538)
chr4 (59-152)||(4852040-4852133)
chr4 (63-143)||(24627362-24627442)
chr4 (37-112)||(3329495-3329569)
chr4 (283-358)||(14803250-14803327)
chr4 (39-122)||(20349574-20349657)
chr4 (63-109)||(7451215-7451261)
chr4 (63-116)||(6735770-6735823)
[»] chr6 (11 HSPs)
chr6 (59-147)||(5131336-5131424)
chr6 (257-365)||(32788367-32788474)
chr6 (291-357)||(8887030-8887095)
chr6 (65-147)||(34256189-34256271)
chr6 (313-365)||(7172884-7172936)
chr6 (59-123)||(31113651-31113715)
chr6 (63-152)||(33301119-33301208)
chr6 (63-147)||(28144393-28144477)
chr6 (59-109)||(6406206-6406256)
chr6 (63-147)||(8519281-8519365)
chr6 (59-123)||(14679568-14679632)
[»] chr3 (18 HSPs)
chr3 (43-143)||(2747075-2747175)
chr3 (57-206)||(12092436-12092585)
chr3 (63-147)||(14521645-14521729)
chr3 (59-147)||(18111091-18111179)
chr3 (49-156)||(27170115-27170222)
chr3 (272-357)||(8678364-8678448)
chr3 (59-144)||(37489374-37489459)
chr3 (65-145)||(19359868-19359948)
chr3 (59-138)||(5835276-5835355)
chr3 (57-143)||(7782831-7782917)
chr3 (59-145)||(19440715-19440801)
chr3 (59-123)||(28034338-28034402)
chr3 (291-358)||(3575665-3575731)
chr3 (59-109)||(5938385-5938435)
chr3 (291-358)||(22805718-22805784)
chr3 (59-149)||(8678161-8678251)
chr3 (291-358)||(21950469-21950535)
chr3 (462-502)||(36120061-36120101)
[»] chr8 (10 HSPs)
chr8 (59-152)||(20811011-20811104)
chr8 (60-147)||(4844420-4844507)
chr8 (43-129)||(25004005-25004091)
chr8 (65-145)||(5557130-5557210)
chr8 (50-144)||(24974950-24975044)
chr8 (59-143)||(25336125-25336209)
chr8 (59-138)||(3166428-3166507)
chr8 (291-364)||(19440804-19440875)
chr8 (291-364)||(19576954-19577025)
chr8 (68-175)||(9984444-9984551)
[»] chr5 (10 HSPs)
chr5 (283-358)||(17303925-17304000)
chr5 (57-157)||(21098954-21099054)
chr5 (65-145)||(41527884-41527964)
chr5 (283-358)||(26075406-26075480)
chr5 (59-138)||(26075646-26075725)
chr5 (257-338)||(21100720-21100800)
chr5 (68-149)||(23213637-23213719)
chr5 (289-355)||(16080029-16080093)
chr5 (63-115)||(19078726-19078778)
chr5 (70-156)||(19209949-19210035)
[»] scaffold0024 (1 HSPs)
scaffold0024 (59-138)||(63468-63547)
[»] scaffold0158 (2 HSPs)
scaffold0158 (63-129)||(5-71)
scaffold0158 (69-147)||(37443-37521)
[»] scaffold0740 (1 HSPs)
scaffold0740 (247-358)||(1156-1267)
[»] scaffold0060 (1 HSPs)
scaffold0060 (59-128)||(45204-45273)
[»] scaffold0046 (1 HSPs)
scaffold0046 (59-143)||(89840-89924)
[»] scaffold0043 (1 HSPs)
scaffold0043 (59-147)||(70124-70212)
[»] scaffold0005 (1 HSPs)
scaffold0005 (283-358)||(36400-36477)


Alignment Details
Target: chr2 (Bit Score: 498; Significance: 0; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 39 - 588
Target Start/End: Original strand, 29747125 - 29747674
Alignment:
Q  39 tgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29747125 tgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtgagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 29747224  T
Q  139 accatctgtctctacatatatctgattttaggatttattgtgttgttctgtatatcttagcgatcgggggaaattctaagatcactgatagtatactttt 238  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |     
T  29747225 accatctgtctctacatatatctgattttaggatttactgtgttgttctgcatatcttagcgatcgggggaaattctaagatcactaatagtatactgtc 29747324  T
Q  239 ataatttctatcttaattatattcatatcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatgg 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  29747325 ataatttctatcttaattatattcatatcatatttcataattaagtcaaaaagttagcgttgaacaaacaattattatctaagttcattttacggaatgg 29747424  T
Q  339 atccgagtggagtaaccccgaatacatgatcgctatgataaaccggctaaattcctatctgaggctagagccggactcctcttgtcgtcgtgaaggttcc 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  29747425 atccgagtggagtaaccccgaatacatgatcgctatgataaaccggctaaattcttatctgaggctagagccggactcctcttgtcgtcgtgcaggttcc 29747524  T
Q  439 ctttcgggctggacctatccagaataatctggagcttttctgagccacaacttaactgattataattatctgaacataattttagtaacatatatctgaa 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29747525 ctttcgggctggacctatccagaataatctggagcttttctgagccacaacttaactgattataattatctgaacataattttagtaacatatatctgaa 29747624  T
Q  539 atgtttctgatcataagtgtaagtatatctgattcataactgagtttatt 588  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29747625 atgtctctgatcataagtgtaagtatatctgattcataactgagtttatt 29747674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 587 - 676
Target Start/End: Original strand, 29747698 - 29747787
Alignment:
Q  587 ttcaggttctgatcatgtggtactcatatatcactcccaagattaaacagtcatacatatatatctgtatagttctgtgacatacatctt 676  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29747698 ttcaggttctgatcatgtggtactcatatatcactcccaagattaaacagtcatacatatatatctgtatagttctgtgacatatatctt 29747787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 298 - 426
Target Start/End: Original strand, 24837425 - 24837550
Alignment:
Q  298 ttgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaatacatgatcgctatgataaaccggctaaattcctatc 397  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| || ||||||||||||| |||||    
T  24837425 ttgaacaaacaattattttttgagttcattttacggaatggatccgagtggagtaaccccgaatacat--ttgctataat-aaccggctaaatttctatc 24837521  T
Q  398 tgaggctagagccggactcctcttgtcgt 426  Q
    |||||||||||| ||| ||||||||||||    
T  24837522 tgaggctagagctggaatcctcttgtcgt 24837550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 38211498 - 38211645
Alignment:
Q  272 ttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaatacatgatcgc 371  Q
    |||||||||||||||||| |||| | || |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||  |||     
T  38211498 ttcataattaagttagaatgttatcgtttaacaaacaattattatatgagttcattttacggaatggatccgactagagtaaccccgaatacat--tcga 38211595  T
Q  372 tatgataaaccggctaaattc-ctatctgaggctagagccggactcctcttg 422  Q
    | |||| |||||||||||||| |||||||| |||| |  |||||||||||||    
T  38211596 tctgat-aaccggctaaattctctatctga-gctataatcggactcctcttg 38211645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 61 - 357
Target Start/End: Original strand, 17863231 - 17863522
Alignment:
Q  61 agggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacatatatc 160  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||| ||||||| || || ||||||||||| ||||||||  |||  |||| |||||||| |    
T  17863231 agggactggggtgagacatgatgtctcagtgagttccacctattctaggttatatgcaatctcggggaacctatgatcgtcattcgtctatacatatacc 17863330  T
Q  161 tgattttaggatttattgtgttgttctgtatatcttagcgatcgggggaaattctaagatcactgatagtatacttttataatttctatcttaattatat 260  Q
    | |||||| |||||| |||  ||||||| ||||| ||||||||||||||||| |||||||| || |  ||||| | | |||| |  | ||      ||||    
T  17863331 taattttatgatttactgttatgttctgcatatcatagcgatcgggggaaat-ctaagatcgctaactgtatattatcataagtcttgtc------atat 17863423  T
Q  261 tcatatcatatttcataa----ttaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccc 356  Q
    | ||||||||||||||||    ||| |||| || |||||| | ||||||||||| |||||| ||||||||||||||| ||| | ||| ||||||||||||    
T  17863424 ttatatcatatttcataaattattatgttaaaaggttagcgtagaacaaacaat-attatccgagttcattttacggcatgca-ccgggtggagtaaccc 17863521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 31347478 - 31347405
Alignment:
Q  50 aaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctc 123  Q
    |||||||  ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  31347478 aaataagtaaaaaggattggggtgagacaggatgtctcagtgagttccacctatcctaggttgtaggcaatctc 31347405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 38211339 - 38211432
Alignment:
Q  50 aaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccat 143  Q
    |||||| ||||| |||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||| |||| |||||  |||||||| ||||    
T  38211339 aaataaaataaaaggattggggtgagacaggatctctcagtgagttccacctatcctaagttgtaggcaatcttggggagcctatgatcgccat 38211432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 18010909 - 18010977
Alignment:
Q  57 ataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcgg 125  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||| || |||| |||||||    
T  18010909 ataaagggattggggtgagacaggatgtctcagtgagttccacctatcctaggctgcaggcaatctcgg 18010977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 33125490 - 33125407
Alignment:
Q  38 ctgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatct 122  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| ||| |||||||| ||||||||  ||||||||||||    
T  33125490 ctgcttatct-aaaataaaataaagggattggggtgagacatgatgtcttagtgagttccacctatcctagactgtaggcgatct 33125407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 24837182 - 24837323
Alignment:
Q  37 tctgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatga 136  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| |||| |||||| |||||| | |||| |||| |||| |  |||| |||||| ||||||    
T  24837182 tctgcttatttgaaaataa-ataaagggattgaggtgagacatgatggctcagtgagttccgcctatcttaggatgtaagaaatcttggggaacctatga 24837280  T
Q  137 tcaccatctgtctctacatatatctgattttaggatttattgt 179  Q
    || |||| | ||| ||||| || || |||||||||| ||||||    
T  24837281 tcgccatatatctgtacatgtacctaattttaggatatattgt 24837323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 31314645 - 31314733
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||| ||| ||||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||||| ||||| ||| |||| ||||||||    
T  31314645 aaagagatcggggtgagacatgatgtttcagtgagttccacctatcctaggttgtaggcaatctcagggaacctaggatcgccatctgt 31314733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 29742295 - 29742419
Alignment:
Q  72 tgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacatatatctgattttagga 171  Q
    |||||| |||| ||||||| |||||||| |||  |||||||||||| ||||| ||||| |||||||| |||||||| | |||||||| || ||| || ||    
T  29742295 tgagacgggatatctcagtgagttccacctattttaggttgtaggcaatctcagggaacctatgatcgccatctgtttgtacatatacctaattata-ga 29742393  T
Q  172 tttattgtgttgttctgtatatctta 197  Q
    ||||||||  | ||||||||| ||||    
T  29742394 tttattgttcttttctgtataactta 29742419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 33119260 - 33119191
Alignment:
Q  38 ctgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctag 108  Q
    |||||||||| ||||| | |||||||||||||||||||||| ||||||| ||| |||||||| ||||||||    
T  33119260 ctgcttatct-aaaatgaaataaagggattggggtgagacatgatgtcttagtgagttccacttatcctag 33119191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 29747073 - 29747108
Alignment:
Q  2 ccggcttccttctgttgatatctggcatgaaccttt 37  Q
    ||||||||||||||||||||||||||||||||||||    
T  29747073 ccggcttccttctgttgatatctggcatgaaccttt 29747108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 19222 - 19151
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaataca 364  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| || || || |||| |||||||||| ||||    
T  19222 gttagcgttgaacaaacaat-attatctgagttcattttacggagtgtat-cgggtggcgtaaccccgagtaca 19151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 21338745 - 21338681
Alignment:
Q  298 ttgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaataca 364  Q
    ||||||||||||| ||||||||||||||||||| ||| || || || ||||||||||||||| ||||    
T  21338745 ttgaacaaacaat-attatctgagttcattttatggagtgtat-cgggtggagtaaccccgagtaca 21338681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 6853 - 6790
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccc 356  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||| || || || ||||||||||||    
T  6853 gttagcgttgaacaaacaat-attatctgagttcattttatggagtgtat-cgggtggagtaaccc 6790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 33118997 - 33118961
Alignment:
Q  301 aacaaacaattattatctgagttcattttacggaatg 337  Q
    |||| |||||||||||| |||||||||||||||||||    
T  33118997 aacacacaattattatcagagttcattttacggaatg 33118961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 40565661 - 40565701
Alignment:
Q  462 ataatctggagcttttctgagccacaacttaactgattata 502  Q
    |||||||||||||| |||||||||||||||| || ||||||    
T  40565661 ataatctggagcttgtctgagccacaacttatctaattata 40565701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 2e-75; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 271 - 497
Target Start/End: Complemental strand, 17762652 - 17762429
Alignment:
Q  271 tttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaatacatgatcg 370  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||  |||    
T  17762652 tttcataataaagttagaaagttagagttgaacaaacaat-attatatgagttcatgttacggaatggacccgggtggagtaaccccgaatacat--tcg 17762556  T
Q  371 ctatgataaaccggctaaattcctatctgaggctagagccggactcctcttgtcgtcgtgaaggttccctttcgggctggacctatccagaataatctgg 470  Q
    || ||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  17762555 ctctgataaaccagctaaattcctatctgaggctagagcccaactcctattgtcgtcgtgaaggttccctttcgggctggacctatccaaaataatcttg 17762456  T
Q  471 agcttttctgagccacaacttaactga 497  Q
    ||||||||| |||||||||||| ||||    
T  17762455 agcttttcttagccacaacttatctga 17762429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 252 - 427
Target Start/End: Original strand, 17914464 - 17914635
Alignment:
Q  252 taattatattcatatcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagt 351  Q
    |||| ||| ||||||||| |||||||||||||||||| | ||||| || || ||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  17914464 taatcataatcatatcatctttcataattaagttagacaattagcgttaaataaacaat-attatttgagttcattttacgaaatggacccgagtggagt 17914562  T
Q  352 aaccccgaatacatgatcgctatgataaaccggctaaattcctatctgaggctagagccggactcctcttgtcgtc 427  Q
    ||||||||||||||  ||   ||    |||||   |||||||||||||||||||   |||||||||||||||||||    
T  17914563 aaccccgaatacatcctc---atacataaccgatgaaattcctatctgaggctaacaccggactcctcttgtcgtc 17914635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 17914248 - 17914405
Alignment:
Q  50 aaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtct 149  Q
    |||||| ||||||||| || | ||||||| ||||||| ||| |||||||| ||||||||  ||||||| | |||  |||| ||||||||  |||||||||    
T  17914248 aaataaaataaagggaatgagatgagacatgatgtcttagtgagttccacctatcctagaatgtaggcaacctcaaggaacctatgatcgtcatctgtct 17914347  T
Q  150 ctacatatatctgattttaggatttattgtgttgttctgtatatcttagcgatcgggg 207  Q
    |||||||||  |||||| |||||||| | | |||||||| ||| ||||||||||||||    
T  17914348 ctacatatacatgatttcaggatttactattttgttctgcataacttagcgatcgggg 17914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 15088261 - 15088349
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| | ||||| ||| |||| ||||||||    
T  15088261 aaagggattggggtgagacaggatgtctcagtgagttccacctatcctaggttgtaggcaatcgcagggaacctaggatcgccatctgt 15088349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 22210869 - 22210957
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| | ||||| ||| |||| ||||||||    
T  22210869 aaagggattggggtgagacaggatgtctcagtgagttccacctatcctaggttgtaggcaatcgcagggaacctaggatcgccatctgt 22210957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 22219619 - 22219707
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||| | ||||| ||| |||| ||||||||    
T  22219619 aaagggattggggtgagacaggatgtctcagtgagttgcacctatcctaggttgtaggcaatcgcagggaacctaggatcgccatctgt 22219707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 22207306 - 22207364
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggc 117  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22207306 aaagggattggggtgagacaggatgtctcagtgagttccacctatcctaggttgtaggc 22207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 14150227 - 14150122
Alignment:
Q  38 ctgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgat 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||| |||||||| || |||||||| |||||||   ||||||| ||||||||||| |||| ||    
T  14150227 ctgcttatctgaaa-taaaataaaaggattggggtgagacatgatgtctcggtgagttccacctatcctaaactgtaggcaatctcggggaacctataat 14150129  T
Q  138 caccatc 144  Q
    | |||||    
T  14150128 cgccatc 14150122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 7898990 - 7899054
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctc 123  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| |||||    
T  7898990 aaagggattggggtgagacaagatgtctcagtgagttccacctatcctagattgtaggcaatctc 7899054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 1944849 - 1944749
Alignment:
Q  57 ataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacata 156  Q
    |||||| |||||||||||||| |||||||| ||| |||||||| | ||||||||||||||| || || ||||  |||||||| |||| ||||| ||||||    
T  1944849 ataaagcgattggggtgagaccggatgtcttagtgagttccacctttcctaggttgtaggcaatatc-gggatcctatgatcgccatatgtctgtacata 1944751  T
Q  157 ta 158  Q
    ||    
T  1944750 ta 1944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 23696212 - 23696137
Alignment:
Q  283 gttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatc-cgagtggagtaaccccg 358  Q
    ||||||||||| || ||||||||||| ||||||||||  ||||||||| |||||||||| |||||||||||||||||    
T  23696212 gttagaaagttcgcgttgaacaaaca-ttattatctggattcattttatggaatggatctcgagtggagtaaccccg 23696137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 7064027 - 7064098
Alignment:
Q  57 ataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcgggga 128  Q
    ||||| ||||| ||||||||||  |||||||||| |||||||| ||||||||||||||||| |||| |||||    
T  7064027 ataaaaggattagggtgagacataatgtctcagtgagttccacctatcctaggttgtaggcaatcttgggga 7064098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 145
Target Start/End: Complemental strand, 44193546 - 44193460
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatct 145  Q
    |||||||||||||||||||   ||||||| || |||||||| ||||||||||||||||| |||||  |||| ||| |||| ||||||    
T  44193546 aaagggattggggtgagacgaaatgtctcggtgagttccacctatcctaggttgtaggcaatctcaaggaacctaggatcgccatct 44193460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 14150009 - 14149917
Alignment:
Q  260 ttcatatcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaa 353  Q
    ||||||||||||||| ||||||||||||||  | ||| |||||||||| || |||||||  |||||||||| |||||||||  |||| ||||||    
T  14150009 ttcatatcatatttcttaattaagttagaatttcagcgttgaacaaac-atcattatctaggttcattttatggaatggatatgagtagagtaa 14149917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 1991675 - 1991596
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 138  Q
    ||||||||||||||||  || ||||||||||| |||||||| |||| || |||||| || |||||||| || ||||||||    
T  1991675 aaagggattggggtgacgcatgatgtctcagtgagttccacctatcataagttgtacgcaatctcgggaaacctatgatc 1991596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 14115628 - 14115535
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctcta 152  Q
    |||||||||||||||||||| ||||||||||   ||||||| ||||||||| || | || | |||||| || |||||||| |||| ||| ||||    
T  14115628 aaagggattggggtgagacaagatgtctcagcgcgttccacctatcctaggctgcaagcaacctcgggaaacctatgatcgccatttgtttcta 14115535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 51843949 - 51844012
Alignment:
Q  65 attggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcgggga 128  Q
    |||||||||||||| ||||||||||| |||||||| |||| || | ||||||| ||||| ||||    
T  51843949 attggggtgagacatgatgtctcagtgagttccacctatcttaaggtgtaggcaatctcaggga 51844012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 6e-42; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 43 - 358
Target Start/End: Complemental strand, 3737963 - 3737661
Alignment:
Q  43 tatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcacca 142  Q
    |||||||||  || |||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||| |||||  |||||||||      
T  3737963 tatctgaaataaaaataaagggattggggtgagacatgatgtctcagtgagttccacctattctaggttgtaggcgatctcagggaacatatgatcactg 3737864  T
Q  143 tctgtctctacatatatctgattttaggatttattgtgttgttctgtatatcttagcgatcgggggaaattctaagatcactgatagtatacttttataa 242  Q
    ||||| |||||||| | ||  ||||| |||||| ||| | |||||| |||  ||||||||||||||| | |||| |||||||  | ||||||| | ||||    
T  3737863 tctgtttctacata-aacttgttttaagatttactgtttagttctgcataatttagcgatcgggggaga-tctaggatcactagttgtatactatcataa 3737766  T
Q  243 tttctatcttaattatattcatatcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatcc 342  Q
     |  | ||      ||||||||||    ||||||||||| |||||||||||||| |||||||||| || |||||||| |||||||||||  ||||||| |    
T  3737765 gtcttgtc------atattcatat----tttcataattatgttagaaagttagcgttgaacaaac-atcattatctgggttcattttacaaaatggattc 3737677  T
Q  343 gagtggagtaaccccg 358  Q
    ||||||||||||||||    
T  3737676 gagtggagtaaccccg 3737661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 19802252 - 19802336
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    ||||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||| |||| ||||||||    
T  19802252 ggattggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaatctcggggaacctacgatcgccatctgt 19802336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 42786587 - 42786499
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||| | ||||||||| ||| |||| ||||||||    
T  42786587 aaagggattggggtgagacaagatgtctcagtgagttccacctatcctaggctataggcaacctcggggaacctaggatcgccatctgt 42786499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 48477399 - 48477487
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||| | ||||||||| ||| |||| ||||||||    
T  48477399 aaagggattggggtgagacaagatgtctcagtgagttccacctatcctaggctataggcaacctcggggaacctaggatcgccatctgt 48477487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 20920433 - 20920353
Alignment:
Q  49 aaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaa 129  Q
    ||||||| || || |||||||| |||| || ||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  20920433 aaaataaaatgaaaggattgggatgaggcatgatgtctcagtgagttccacctatcctaggttgtaggcaatctcggggaa 20920353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 21959290 - 21959210
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccat 143  Q
    ||||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||| |||| ||||    
T  21959290 ggattggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaatctcggggaacctaggatcgccat 21959210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 1455108 - 1455183
Alignment:
Q  283 gttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatc-cgagtggagtaaccccg 358  Q
    ||||||| |||||  ||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||    
T  1455108 gttagaaggttagtgttgaacaaaca-ttattatctgagttgattttacgaaatggatcacgagtggagtaaccccg 1455183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 3079112 - 3079024
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||| ||||||||||||||||| | |||||||| |||||||||| |||||  ||| | ||||| ||| |||| ||||||||    
T  3079112 aaagggattgggctgagacaggatgtctcaatgagttccacctatcctaggtagtaggaaatcgcagggaacctaggatcgccatctgt 3079024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 4340549 - 4340632
Alignment:
Q  64 gattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| | |||||| || ||| ||||| |||||||    
T  4340549 gattggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaacctcgggaaacctaggatcatcatctgt 4340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 354
Target Start/End: Complemental strand, 20920179 - 20920122
Alignment:
Q  298 ttgaacaaacaattattatctgagttcattttacggaatggatcc-gagtggagtaac 354  Q
    |||||||||||||| |||||||  || ||||||| |||||||||| ||||||||||||    
T  20920179 ttgaacaaacaatttttatctggattgattttactgaatggatcctgagtggagtaac 20920122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 5e-30; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 309 - 427
Target Start/End: Original strand, 12398808 - 12398924
Alignment:
Q  309 attattatctgagttcattttacggaatggatccgagtggagtaaccccgaatacatgatcgctatgataaaccggctaaattcctatctgaggctagag 408  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||  ||||| |||||||||  |||||||||||| |||||||||||    
T  12398808 attattatctgagttcattttacagaatggatttgagtggagtaaccctgaatacat--tcgctctgataaaccaactaaattcctatatgaggctagag 12398905  T
Q  409 ccggactcctcttgtcgtc 427  Q
      |||||||||||||||||    
T  12398906 atggactcctcttgtcgtc 12398924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 1604804 - 1604688
Alignment:
Q  38 ctgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgat 137  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||  || ||||| |||| ||    
T  1604804 ctgctcatctgaaaataa-ataaagggattggggtgagacaggaggtctcagtgagttccacctatcctaggttgtaggcgacttcagggaacctataat 1604706  T
Q  138 caccatctgtctctacat 155  Q
    | |||||||||| |||||    
T  1604705 cgccatctgtctttacat 1604688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 3329338 - 3329265
Alignment:
Q  283 gttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaacccc 357  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3329338 gttagaaggttagcattgaataaacaat-attatctgagttcattttacgaaatggatccgagtggagtaacccc 3329265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 1505339 - 1505427
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||| ||||| ||||| ||| |||| ||||||||    
T  1505339 aaagggattggggtgagacaagatgtcttagtgagttccacctatcctaggttgtaggcaatctcagggaacctaggatcgccatctgt 1505427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 2895229 - 2895141
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||| | ||||||||| ||| |||| ||||||||    
T  2895229 aaagggattggggtgagacaagatgtctcagtgagttccacctatcctaggctataggcaacctcggggaacctaggatcgccatctgt 2895141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 5908497 - 5908585
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||| | ||||||||| ||| |||| ||||||||    
T  5908497 aaagggattggggtgagacaagatgtctcagtgagttccacctatcctaggctataggcaacctcggggaacctaggatcgccatctgt 5908585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 5599255 - 5599344
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctcta 152  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||||||||||| | ||| ||||| ||| |||| |||||||| ||||    
T  5599255 ggattggggtgagacaagatgtctcagtgagttccatctatcctaggttgtaggcaacctcagggaacctaggatccccatctgtttcta 5599344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 13701957 - 13702045
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| || ||||| || || ||| |||| ||||||||    
T  13701957 aaagggattggggtgagataagatgtctcagtgagttccacctatcctaggttgtacgcaatctcaggaaacctacgatcgccatctgt 13702045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 13712450 - 13712538
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| || ||||| || || ||| |||| ||||||||    
T  13712450 aaagggattggggtgagataagatgtctcagtgagttccacctatcctaggttgtacgcaatctcaggaaacctacgatcgccatctgt 13712538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 4852040 - 4852133
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctcta 152  Q
    |||||||||||| ||||||| ||||| ||| | |||||||| ||||||||||||||||| | ||||||||| ||| |||| |||| ||| ||||    
T  4852040 aaagggattgggatgagacaagatgtttcactgagttccacctatcctaggttgtaggcaacctcggggaacctaggatcgccatttgtttcta 4852133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 24627362 - 24627442
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccat 143  Q
    |||||||||||| ||| ||||||||||  |||||||| ||||||||| ||||||| ||||| ||||| |||||||| ||||    
T  24627362 ggattggggtgacacatgatgtctcagcgagttccacctatcctaggatgtaggcaatctcagggaacctatgatcgccat 24627442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 3329569 - 3329495
Alignment:
Q  37 tctgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttg 112  Q
    |||||||||||||||  ||| |||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||    
T  3329569 tctgcttatctgaaataaag-taaaaggattggggtgagacaagatgtctcagtgagttccacctatcttaggttg 3329495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 14803327 - 14803250
Alignment:
Q  283 gttagaaagttagcattgaacaaa-caattattatctgagttcattttacggaatggat-ccgagtggagtaaccccg 358  Q
    ||||||| |||||| ||| ||||| |||||||||||||  || |||||||||||||||| |||||||||| |||||||    
T  14803327 gttagaaggttagcgttgcacaaaacaattattatctggattgattttacggaatggatcccgagtggagcaaccccg 14803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 20349657 - 20349574
Alignment:
Q  39 tgcttatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatct 122  Q
    |||||| ||||||  || ||||| | |||||| ||||||| ||||||||||| |||||||| ||| ||||| ||||||| ||||    
T  20349657 tgcttaactgaaataaaaataaaagaattgggatgagacaagatgtctcagtgagttccacctatactaggctgtaggcaatct 20349574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 7451215 - 7451261
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctagg 109  Q
    ||||||||||||||||  | ||||||||||||||||| |||||||||    
T  7451215 ggattggggtgagacataaggtctcagtaagttccacctatcctagg 7451261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 6735823 - 6735770
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtagg 116  Q
    |||||||| ||||||| ||||||||||| |||||||| ||||||| | ||||||    
T  6735823 ggattgggatgagacatgatgtctcagtgagttccacctatcctaagctgtagg 6735770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 8e-26; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 5131424 - 5131336
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||| |||| ||||||||    
T  5131424 aaagggattggggtgagacaagatgtctcagtgagttccacctatcctaggttgtaggcaatctcggggaacctaggatcgccatctgt 5131336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 365
Target Start/End: Complemental strand, 32788474 - 32788367
Alignment:
Q  257 atattcatatcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccc 356  Q
    ||||||||||||||||| |||| || |||||| ||||||| ||||||||||| | |||||||  ||||||||||| |||||||||||||| |||||||||    
T  32788474 atattcatatcatattttataactatgttagatagttagcgttgaacaaaca-tcattatctaggttcattttacagaatggatccgagtagagtaaccc 32788376  T
Q  357 cgaatacat 365  Q
    |||| ||||    
T  32788375 cgaacacat 32788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 8887095 - 8887030
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaacccc 357  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  8887095 gttagcgttgaacaaacaat-attatctgagttcattttacggaatgcatccgagtgaagtaacccc 8887030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 34256271 - 34256189
Alignment:
Q  65 attggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    ||||||||||||||  ||| |||||| |||||||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  34256271 attggggtgagacaaaatgcctcagtgagttccacctatcctaggctgtaggcaatctcggggaatctaggatcgccatctgt 34256189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 7172936 - 7172884
Alignment:
Q  313 ttatctgagttcattttacggaatggatccgagtggagtaaccccgaatacat 365  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7172936 ttatctgagttcattttacggaatgcatccgagtggagtaaccccgagtacat 7172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 31113715 - 31113651
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctc 123  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||| |||||    
T  31113715 aaagggattggggtgagacatgatgtctcagtgagttccacctatcctaggctgtaggcaatctc 31113651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 33301208 - 33301119
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctcta 152  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||||||||||| | || |||||| ||| |||| | |||||| ||||    
T  33301208 ggattggggtgagacaagatgtctcagtgagttccatctatcctaggttgtaggcaacctgggggaacctaggatcgcaatctgtttcta 33301119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 28144393 - 28144477
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||| |||||||  |||||||||| |||||||| ||| ||||  ||||||| ||||||||||| ||| |||| ||||||||    
T  28144393 ggattgggctgagacaaaatgtctcagtgagttccacctatactagactgtaggcaatctcggggaacctaggatcgccatctgt 28144477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 6406206 - 6406256
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctagg 109  Q
    |||||||||||||||||||| ||||||||||| |||| ||| |||||||||    
T  6406206 aaagggattggggtgagacatgatgtctcagtgagttgcacctatcctagg 6406256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 8519281 - 8519365
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||| |||||||||  |||||| ||| |||| ||| |||| |||||||||||| |||||  |||| ||| |||||||||||||    
T  8519281 ggattgaggtgagacaaaatgtctaagtgagtttcacctatcttaggttgtaggcaatctctaggaacctaggatcaccatctgt 8519365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 14679568 - 14679632
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctc 123  Q
    ||||| |||| |||| |||||||||||| ||| |||| ||| ||||||| ||||||||| |||||    
T  14679568 aaaggtattgaggtgtgacaggatgtcttagtgagtttcacttatcctatgttgtaggcaatctc 14679632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 8e-26; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 2747175 - 2747075
Alignment:
Q  43 tatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcacca 142  Q
    |||||||||||||   |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||| |||| |||    
T  2747175 tatctgaaaataaataaaagggattggggtgagacaggatgtctcagtgagttccacctatcctaggttgtaggcaatctcagggaacctaggatcgcca 2747076  T
Q  143 t 143  Q
    |    
T  2747075 t 2747075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 12092585 - 12092436
Alignment:
Q  57 ataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacata 156  Q
    ||||||||| |||| ||||||||||| ||||||| | |||||| |||  |||||||||||| |||||  |||||||||||||  ||| ||||||||||||    
T  12092585 ataaagggaatgggatgagacaggatatctcagtgaattccacctattttaggttgtaggcaatctcatggaatctatgatcgtcatttgtctctacata 12092486  T
Q  157 tatctgattttaggatttattgtgttgttctgtatatcttagcgatcggg 206  Q
    || ||||||| |||||||| | |  ||||||  ||| |||||||||||||    
T  12092485 tacctgatttcaggatttactattatgttctccataacttagcgatcggg 12092436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 14521729 - 14521645
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    ||||||||||||||||  |||||| ||| |||||||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  14521729 ggattggggtgagacaaaatgtcttagtgagttccacctatcctaggctgtaggcaatctcggggaatctaagatcgccatctgt 14521645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 18111091 - 18111179
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || || ||||| ||| |||| ||||||||    
T  18111091 aaagggatcggggtgagacatgatgtctcagtgagttccacctatcctaggttgtaggcaatatcagggaacctaggatcgccatctgt 18111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 27170115 - 27170222
Alignment:
Q  49 aaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtc 148  Q
    ||||||| |||||  ||||| ||||||||| ||||||||||| |||||||  |||| ||||||| |||| |||||  |||| ||||||||||||||||||    
T  27170115 aaaataaaataaaatgattgaggtgagacatgatgtctcagtgagttccatctatcataggttgaaggcaatctctaggaacctatgatcaccatctgtc 27170214  T
Q  149 tctacata 156  Q
    | ||||||    
T  27170215 tatacata 27170222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 8678364 - 8678448
Alignment:
Q  272 ttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaacccc 357  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||||||||  |||||| ||||| | ||| |||||||||||||    
T  8678364 ttcataattaagttagaatgttagcgttgaataaacaattattatctgagtttgttttacagaatgca-ccgggtggagtaacccc 8678448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 37489374 - 37489459
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatc 144  Q
    |||||||||||||||||||| |||||||| || |||||||| ||||||||||||||||| ||||| || || ||| |||| |||||    
T  37489374 aaagggattggggtgagacaagatgtctcggtgagttccacctatcctaggttgtaggcaatctcaggaaacctaggatcgccatc 37489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 19359948 - 19359868
Alignment:
Q  65 attggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatct 145  Q
    ||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||| |||| ||||||    
T  19359948 attggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaatctcggggaacctaggatcgccatct 19359868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 5835276 - 5835355
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 138  Q
    |||||||||||||||||| ||||||||||||| |||||||| ||||||||| | ||||| ||||| ||||| ||| ||||    
T  5835276 aaagggattggggtgagataggatgtctcagtgagttccacctatcctaggctataggcaatctcagggaacctaggatc 5835355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 7782831 - 7782917
Alignment:
Q  57 ataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccat 143  Q
    ||||| ||||| |||||||||| ||||||| ||| |||||||| ||||||| | | ||||| ||||||||||| |||||||||||||    
T  7782831 ataaatggattagggtgagacacgatgtcttagtgagttccacctatcctaagctataggcaatctcggggaacctatgatcaccat 7782917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 19440715 - 19440801
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatct 145  Q
    |||||||||| ||||||||| ||||||||||| |||||||| ||||||||| ||||||| |||||  |||| ||| |||| ||||||    
T  19440715 aaagggattgaggtgagacatgatgtctcagtgagttccacctatcctaggctgtaggcaatctcaaggaacctaggatcgccatct 19440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 28034338 - 28034402
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctc 123  Q
    |||||||||||||||||||| ||||||||||| | |||||| ||||||||||||| ||| |||||    
T  28034338 aaagggattggggtgagacaagatgtctcagtgaattccacctatcctaggttgttggcaatctc 28034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 3575665 - 3575731
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccg 358  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |    ||||||||||||||||||    
T  3575665 gttagcattgaacaaacaat-attatctgagttcattttacggattaatcccgagtggagtaaccccg 3575731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 5938385 - 5938435
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctagg 109  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  5938385 aaagggattggggtgagataggatgtctcagtgagttccacctatcctagg 5938435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 22805718 - 22805784
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccg 358  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |    ||||||||||||||||||    
T  22805718 gttagcgttgaacaaacaat-attatctgagttcattttacggattaatcccgagtggagtaaccccg 22805784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 8678161 - 8678251
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtct 149  Q
    ||||| |||||||||||| ||| ||||||||| ||| |||| ||||||||| | |||   ||||||| ||| |||||||| ||||||||||    
T  8678161 aaaggaattggggtgagataggttgtctcagtgagtcccacttatcctaggctatagataatctcggagaaactatgatcgccatctgtct 8678251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 21950469 - 21950535
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccg 358  Q
    |||||| ||||||||||||| |||||||||||||||||||| || |    ||||||||||||||||||    
T  21950469 gttagcgttgaacaaacaat-attatctgagttcattttacagattaatcccgagtggagtaaccccg 21950535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 502
Target Start/End: Original strand, 36120061 - 36120101
Alignment:
Q  462 ataatctggagcttttctgagccacaacttaactgattata 502  Q
    |||||||||||||| |||||||||||||||| || ||||||    
T  36120061 ataatctggagcttgtctgagccacaacttatctaattata 36120101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 20811104 - 20811011
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctcta 152  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||| | ||| ||| |||| |||||||| ||||    
T  20811104 aaagggattggggtgagacagaatgtctcagtgagttccacctatcctaggttgtaggcaatctcagtgaacctaggatcgccatctgtttcta 20811011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 4844507 - 4844420
Alignment:
Q  60 aagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    |||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||| ||||| ||||| ||| |||| ||||||||    
T  4844507 aagggattggggtgagacaggatgccgcagtgagttccacctatcctaggttgtaggcaatctcagggaacctaggatcgccatctgt 4844420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 25004091 - 25004005
Alignment:
Q  43 tatctgaaaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaa 129  Q
    |||||||||  || ||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||| ||||| |||||    
T  25004091 tatctgaaataaaaataaagggattggggtgagacagaatgtctcagtgagttccacctatcctaggctgtaggcaatctcagggaa 25004005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 5557130 - 5557210
Alignment:
Q  65 attggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatct 145  Q
    ||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||| |||| ||||||    
T  5557130 attggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaatctcggggaacctaggatcgccatct 5557210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 24975044 - 24974950
Alignment:
Q  50 aaataagataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatc 144  Q
    |||||| ||||||| | |||||||||||||||| ||||||| ||||||||||||||||   |||| |  ||||||| |||||||||||| |||||    
T  24975044 aaataaaataaaggaaatggggtgagacaggatatctcagtgagttccacatatcctaaaatgtatgaaatctcggagaatctatgatcgccatc 24974950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 25336125 - 25336209
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccat 143  Q
    ||||| ||||||||||||||||||||| |||| |||||||| ||||||||| | ||||| ||||| ||||| ||| |||| ||||    
T  25336125 aaaggaattggggtgagacaggatgtcccagtgagttccacctatcctaggctataggcaatctcagggaacctaggatcgccat 25336209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 3166507 - 3166428
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 138  Q
    |||| ||||||||||||||| ||||||||  | |||||||  ||||||||||||||||| ||||| ||||| ||| ||||    
T  3166507 aaagtgattggggtgagacatgatgtctcgatgagttccatctatcctaggttgtaggcaatctcagggaacctaggatc 3166428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 19440875 - 19440804
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaataca 364  Q
    |||||| ||||||||||||| ||||||||||||||||||||||  || || || ||||||||||||||| ||||    
T  19440875 gttagcgttgaacaaacaat-attatctgagttcattttacggggtgtat-cgggtggagtaaccccgagtaca 19440804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 19577025 - 19576954
Alignment:
Q  291 gttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccgaataca 364  Q
    |||||| ||||||||||||| ||||||||||||||||||||||  || || || ||||||||||||||| ||||    
T  19577025 gttagcgttgaacaaacaat-attatctgagttcattttacggggtgtat-cgggtggagtaaccccgagtaca 19576954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 9984551 - 9984444
Alignment:
Q  68 ggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacatatatctgatttt 167  Q
    |||||||||||| || ||||| | |||||||| ||||||||| ||||| | |||||  ||||||||||||  |||| |||| || |||||| || ||||     
T  9984551 ggggtgagacagaatatctcaatgagttccacctatcctaggctgtagacaatctcaaggaatctatgattgccatttgtcgctgcatatacctaatttc 9984452  T
Q  168 aggattta 175  Q
    | ||||||    
T  9984451 atgattta 9984444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 5e-21; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 17304000 - 17303925
Alignment:
Q  283 gttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggat-ccgagtggagtaaccccg 358  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17304000 gttagaaagttagcgttgaacaaaca-taattatctgagttcattttacggaatggatcccgagtggagtaaccccg 17303925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 21098954 - 21099054
Alignment:
Q  57 ataaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacata 156  Q
    ||||| |||||| | |||||||| |||| ||||| |||||||| ||||||||| ||| ||| ||| |||||||||||||||| |||| ||||| ||||||    
T  21098954 ataaaaggattgagatgagacagaatgtttcagtgagttccacctatcctaggctgtgggcaatcgcggggaatctatgatcgccatttgtctatacata 21099053  T
Q  157 t 157  Q
    |    
T  21099054 t 21099054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 41527884 - 41527964
Alignment:
Q  65 attggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatct 145  Q
    ||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||| |||| ||||||    
T  41527884 attggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaatctcggggaacctaggatcgccatct 41527964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 26075480 - 26075406
Alignment:
Q  283 gttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaaccccg 358  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||  | || |||||||||||||||    
T  26075480 gttagaatgttagcgttgaacaaacaat-attatctgagttcattttacggaataaacccaagtggagtaaccccg 26075406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 26075725 - 26075646
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 138  Q
    |||||||||||||||||||||||||| ||||| ||||||||  |||||| ||||||||| ||||||| ||| ||| ||||    
T  26075725 aaagggattggggtgagacaggatgtatcagtgagttccaccaatcctatgttgtaggcaatctcggagaacctaggatc 26075646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 21100720 - 21100800
Alignment:
Q  257 atattcatatcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatgg 338  Q
    ||||| |||||||||| | |||||| ||||||| |||||| |||||||||||||||||||||  ||| ||||||||||||||    
T  21100720 atatttatatcatatt-cttaattatgttagaaggttagcgttgaacaaacaattattatctcggttgattttacggaatgg 21100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 23213637 - 23213719
Alignment:
Q  68 ggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcgggg-aatctatgatcaccatctgtct 149  Q
    |||||||||||  |||||| ||| |||||||| ||||||||||| ||||| ||||||||| || |||||||| ||||||||||    
T  23213637 ggggtgagacattatgtcttagtgagttccacctatcctaggttttaggcaatctcggggaaacctatgatcgccatctgtct 23213719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 16080093 - 16080029
Alignment:
Q  289 aagttagcattgaacaaacaattattatctgagttcattttacggaatggatccgagtggagtaacc 355  Q
    |||||||| | |||||||||||  |||||||||||||||||||||||| || |||||||||||||||    
T  16080093 aagttagcgtggaacaaacaatg-ttatctgagttcattttacggaat-gagccgagtggagtaacc 16080029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 19078778 - 19078726
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtag 115  Q
    |||||||| |||||| |||||||||||| |||||||| ||||||||| |||||    
T  19078778 ggattgggatgagacgggatgtctcagtgagttccacctatcctaggctgtag 19078726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 19209949 - 19210035
Alignment:
Q  70 ggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgtctctacata 156  Q
    ||||||||  ||||||||||| |||| ||| ||| ||||||||||||  ||||||| |||  | ||||| |||||||||| ||||||    
T  19209949 ggtgagacgagatgtctcagtgagtttcacctattctaggttgtaggtaatctcggagaacatttgatcgccatctgtctgtacata 19210035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 63468 - 63547
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatc 138  Q
    |||| |||||||||| |||||||||||||||| |||||||| ||||||| |||||| || ||||||||||| ||| ||||    
T  63468 aaagagattggggtgtgacaggatgtctcagtgagttccacctatcctaagttgtatgctatctcggggaacctacgatc 63547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 71 - 5
Alignment:
Q  63 ggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaa 129  Q
    ||||||||||||||||  |||||||||| |||||||| ||||||||| ||||||| |||||||||||    
T  71 ggattggggtgagacaaaatgtctcagtgagttccacctatcctaggctgtaggcaatctcggggaa 5  T

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Target: scaffold0158; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 37521 - 37443
Alignment:
Q  69 gggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    ||||||||||  |||||||| | |||||||| ||||||||| ||||| | ||||||||||| |||  ||| ||||||||    
T  37521 gggtgagacaaaatgtctcatttagttccacctatcctaggctgtagacaatctcggggaacctacaatcgccatctgt 37443  T

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Target: scaffold0740 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 358
Target Start/End: Original strand, 1156 - 1267
Alignment:
Q  247 tatcttaattatattcata-tcatatttcataattaagttagaaagttagcattgaacaaacaattattatctgagttcattttacggaatggat-ccga 344  Q
    |||| |||| ||||||||| ||||||||| | |||| |||||||| ||||| |  |||| ||||||||||||||||| |||||||| |||||||| ||||    
T  1156 tatcataatcatattcatagtcatatttc-tcattatgttagaaa-ttagcgtgtaacacacaattattatctgagtgcattttacagaatggatcccga 1253  T
Q  345 gtggagtaaccccg 358  Q
    ||||||||||||||    
T  1254 gtggagtaaccccg 1267  T

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Target: scaffold0060 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 45273 - 45204
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcgggga 128  Q
    ||||||||||||||||||||  |||||| ||| ||||||||||| |||||||||||||| ||||| ||||    
T  45273 aaagggattggggtgagacaaaatgtcttagtgagttccacataccctaggttgtaggcaatctcaggga 45204  T

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Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 89840 - 89924
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccat 143  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||||||| ||||||| ||| | ||||| ||| |||| ||||    
T  89840 aaagggattggagtgagacaagatgtctcagtgagttccacctatcctaggctgtaggcaatcacagggaacctaggatcgccat 89924  T

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Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 70212 - 70124
Alignment:
Q  59 aaagggattggggtgagacaggatgtctcagtaagttccacatatcctaggttgtaggcgatctcggggaatctatgatcaccatctgt 147  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||||| || |||| ||||| ||| | ||| ||||| |||||||    
T  70212 aaagggattcgggtgagacaagatgtctcagtgagttccacctatcctaggatgcaggcaatctcagggtacctaggatcaacatctgt 70124  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 36400 - 36477
Alignment:
Q  283 gttagaaagttagcattgaacaaa-caattattatctgagttcattttacggaatggat-ccgagtggagtaaccccg 358  Q
    ||||||| |||||| ||| ||||| |||||||||||||  || |||||||||||||||| |||||||||| |||||||    
T  36400 gttagaaggttagcgttgcacaaaacaattattatctggattgattttacggaatggatcccgagtggagcaaccccg 36477  T

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