View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20165_low_8 (Length: 448)
Name: NF20165_low_8
Description: NF20165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20165_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 23 - 439
Target Start/End: Complemental strand, 21389537 - 21389121
Alignment:
| Q |
23 |
gaacaatcaagattttaaactcgatatcttacataaaagaaatcaaaatttgcttcaaaatgtagatcgttcgatcttaatttgacaactcaaatgcgcg |
122 |
Q |
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| T |
21389537 |
gaacaatcaagattttaaactcgatattttacattaaagaaatcaacatttgcttcaaaatgtaggtcgttcgatcttaatttgacaacttaaatgcgtg |
21389438 |
T |
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| Q |
123 |
tacttaatccaaatccctaaacatatagatatctaacgaactaatagcacatagaaccaacaacaaatactggtatgatggagaaccatcgtacgtgtta |
222 |
Q |
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| T |
21389437 |
tacttaatccaaatccctaaacatatagatatctaacgaactaatagcacatagaaccaacaacaaatactggtatgatggagaaccatcgtacgtgtta |
21389338 |
T |
|
| Q |
223 |
cacgagtttggcgactgaaatcttataatcaaagatacacaaaacatgtttgctacacaagctactaaaaggagcatgctcaacaaaggtaatccaaatt |
322 |
Q |
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| T |
21389337 |
cacgagtttggcgactgaaatcttataatcaaagatacacaaaacatgtttgctacacaagctgctaaaaggagcatgctcaacaaaggtaatccatatt |
21389238 |
T |
|
| Q |
323 |
cacttccattaaagatcagtgacagctagcactacatgtatgattaaacacaagcaggacaaagacaatagctagtgactacacggttttggtaaattat |
422 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21389237 |
cacttccattaaagatcagtgacagctagcactacatgtatgattaaacacaagcaggacaaagacaatagctagtgactacacggttttggtaaattat |
21389138 |
T |
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| Q |
423 |
aaaaatatcttgatttt |
439 |
Q |
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||||||| |||||||| |
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| T |
21389137 |
gaaaatatattgatttt |
21389121 |
T |
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