View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20166_low_8 (Length: 321)

Name: NF20166_low_8
Description: NF20166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20166_low_8
NF20166_low_8
[»] chr2 (51 HSPs)
chr2 (23-311)||(31056210-31056499)
chr2 (19-311)||(8040230-8040525)
chr2 (19-310)||(34681970-34682262)
chr2 (23-242)||(42269605-42269825)
chr2 (149-311)||(33528396-33528554)
chr2 (151-311)||(21630112-21630268)
chr2 (151-311)||(34389018-34389174)
chr2 (149-311)||(14698781-14698939)
chr2 (133-311)||(2837782-2837960)
chr2 (149-311)||(33118302-33118460)
chr2 (149-311)||(13569496-13569654)
chr2 (167-311)||(17865372-17865513)
chr2 (149-292)||(10445239-10445378)
chr2 (167-302)||(36757551-36757682)
chr2 (149-302)||(28258949-28259097)
chr2 (149-311)||(10707024-10707182)
chr2 (133-270)||(1344299-1344435)
chr2 (154-311)||(2869468-2869622)
chr2 (178-311)||(39483100-39483230)
chr2 (149-308)||(40015095-40015250)
chr2 (149-311)||(8389921-8390079)
chr2 (149-311)||(20522389-20522547)
chr2 (151-312)||(23078245-23078401)
chr2 (150-302)||(40739011-40739158)
chr2 (149-311)||(15903661-15903820)
chr2 (124-311)||(35397677-35397861)
chr2 (149-275)||(3491955-3492079)
chr2 (187-267)||(25409842-25409922)
chr2 (149-249)||(33162647-33162743)
chr2 (149-249)||(39284760-39284856)
chr2 (54-249)||(36773326-36773533)
chr2 (150-259)||(41586322-41586429)
chr2 (169-311)||(3278167-3278307)
chr2 (220-311)||(18674239-18674330)
chr2 (149-247)||(36988274-36988368)
chr2 (156-249)||(11151788-11151877)
chr2 (156-249)||(11690383-11690472)
chr2 (156-249)||(42362234-42362323)
chr2 (187-275)||(9296203-9296292)
chr2 (149-249)||(36318206-36318302)
chr2 (187-255)||(11098728-11098796)
chr2 (221-311)||(28770613-28770704)
chr2 (156-249)||(723941-724030)
chr2 (156-249)||(14202604-14202693)
chr2 (25-71)||(33162802-33162848)
chr2 (220-249)||(14634023-14634052)
chr2 (220-249)||(24885603-24885632)
chr2 (220-249)||(29867811-29867840)
chr2 (220-249)||(34139968-34139997)
chr2 (221-249)||(11067248-11067276)
chr2 (149-201)||(12632959-12633010)
[»] chr1 (51 HSPs)
chr1 (23-311)||(40816458-40816746)
chr1 (27-311)||(19073095-19073380)
chr1 (27-311)||(19120985-19121270)
chr1 (19-311)||(47703574-47703865)
chr1 (149-311)||(47102611-47102769)
chr1 (149-311)||(47098597-47098755)
chr1 (150-311)||(29651980-29652137)
chr1 (149-312)||(13598566-13598725)
chr1 (151-312)||(3281874-3282030)
chr1 (150-311)||(22819596-22819756)
chr1 (149-311)||(32889607-32889763)
chr1 (149-310)||(9476430-9476587)
chr1 (149-302)||(13604394-13604542)
chr1 (151-312)||(21536344-21536500)
chr1 (149-310)||(27104174-27104330)
chr1 (149-302)||(37069944-37070092)
chr1 (149-312)||(26644670-26644828)
chr1 (220-311)||(16124353-16124444)
chr1 (149-311)||(9022678-9022834)
chr1 (149-275)||(19358612-19358735)
chr1 (149-275)||(19361201-19361324)
chr1 (149-275)||(19366076-19366200)
chr1 (149-275)||(24202537-24202661)
chr1 (41-220)||(17345219-17345402)
chr1 (54-139)||(45644660-45644746)
chr1 (169-249)||(41360807-41360886)
chr1 (228-275)||(19379917-19379964)
chr1 (54-249)||(50169407-50169601)
chr1 (149-247)||(3189206-3189300)
chr1 (149-247)||(3198023-3198117)
chr1 (149-247)||(3206862-3206956)
chr1 (149-249)||(15820182-15820278)
chr1 (54-138)||(50167494-50167579)
chr1 (156-249)||(834364-834453)
chr1 (54-222)||(28265789-28265958)
chr1 (149-249)||(10925098-10925194)
chr1 (149-249)||(13138171-13138267)
chr1 (149-249)||(31659113-31659209)
chr1 (207-307)||(11031302-11031400)
chr1 (40-114)||(47255881-47255956)
chr1 (157-249)||(4552834-4552922)
chr1 (149-249)||(23555462-23555558)
chr1 (149-249)||(28220423-28220519)
chr1 (149-249)||(28223618-28223714)
chr1 (149-249)||(44455035-44455131)
chr1 (149-243)||(3156741-3156831)
chr1 (156-249)||(197105-197194)
chr1 (156-249)||(3847318-3847407)
chr1 (220-308)||(25116539-25116629)
chr1 (220-249)||(30476645-30476674)
chr1 (221-249)||(28265751-28265779)
[»] chr5 (35 HSPs)
chr5 (25-311)||(10281919-10282204)
chr5 (104-311)||(3880467-3880673)
chr5 (149-311)||(28832424-28832582)
chr5 (149-311)||(11181604-11181762)
chr5 (149-311)||(17003731-17003889)
chr5 (149-311)||(24553299-24553457)
chr5 (149-311)||(31300367-31300525)
chr5 (151-312)||(11916746-11916902)
chr5 (149-302)||(9353104-9353252)
chr5 (153-311)||(7160679-7160834)
chr5 (169-311)||(19588912-19589051)
chr5 (149-302)||(14520407-14520555)
chr5 (149-302)||(15464711-15464859)
chr5 (151-311)||(12083951-12084106)
chr5 (149-284)||(36932120-36932250)
chr5 (153-275)||(42127146-42127264)
chr5 (149-275)||(38219603-38219727)
chr5 (237-311)||(42127266-42127340)
chr5 (149-280)||(35387862-35387991)
chr5 (127-267)||(33030687-33030824)
chr5 (249-311)||(2630398-2630460)
chr5 (25-114)||(28277844-28277934)
chr5 (149-249)||(13488078-13488174)
chr5 (187-275)||(24136053-24136142)
chr5 (149-249)||(28750852-28750948)
chr5 (149-246)||(39468749-39468842)
chr5 (149-249)||(533644-533740)
chr5 (223-311)||(5611309-5611398)
chr5 (236-301)||(30900043-30900108)
chr5 (150-249)||(42426432-42426527)
chr5 (156-245)||(3075859-3075944)
chr5 (156-249)||(5887613-5887702)
chr5 (49-114)||(16642424-16642489)
chr5 (220-249)||(19806326-19806355)
chr5 (187-255)||(31180441-31180509)
[»] chr8 (45 HSPs)
chr8 (25-311)||(26402873-26403159)
chr8 (25-311)||(6127390-6127676)
chr8 (23-249)||(9765495-9765720)
chr8 (149-310)||(4696380-4696537)
chr8 (149-311)||(5702252-5702411)
chr8 (149-311)||(3051287-3051446)
chr8 (149-311)||(23799348-23799506)
chr8 (149-311)||(7412508-7412665)
chr8 (169-311)||(19752185-19752323)
chr8 (149-302)||(4456205-4456353)
chr8 (151-312)||(19175528-19175684)
chr8 (149-310)||(28307730-28307888)
chr8 (149-311)||(5990334-5990491)
chr8 (110-284)||(9054152-9054323)
chr8 (199-308)||(7492993-7493100)
chr8 (149-275)||(1261722-1261846)
chr8 (189-275)||(31071035-31071121)
chr8 (124-311)||(13204538-13204713)
chr8 (25-131)||(18141569-18141676)
chr8 (149-275)||(26288095-26288219)
chr8 (149-275)||(26301352-26301476)
chr8 (149-275)||(26313346-26313470)
chr8 (54-249)||(5689048-5689242)
chr8 (169-249)||(19491895-19491974)
chr8 (25-136)||(30291341-30291453)
chr8 (149-247)||(4733684-4733778)
chr8 (149-249)||(15212661-15212757)
chr8 (149-249)||(43036298-43036394)
chr8 (149-247)||(42498069-42498163)
chr8 (149-249)||(30143217-30143313)
chr8 (149-249)||(33352025-33352121)
chr8 (149-246)||(3303870-3303963)
chr8 (150-249)||(3318745-3318842)
chr8 (149-249)||(4731533-4731629)
chr8 (187-255)||(10688941-10689009)
chr8 (187-255)||(36979605-36979672)
chr8 (187-255)||(4759875-4759944)
chr8 (170-246)||(4162396-4162468)
chr8 (220-249)||(4743400-4743429)
chr8 (220-249)||(18106275-18106304)
chr8 (220-249)||(41365044-41365073)
chr8 (187-255)||(6311526-6311594)
chr8 (187-255)||(18870362-18870430)
chr8 (187-255)||(30655874-30655942)
chr8 (187-255)||(33037609-33037677)
[»] scaffold0148 (1 HSPs)
scaffold0148 (19-311)||(10897-11189)
[»] chr3 (61 HSPs)
chr3 (19-311)||(3715629-3715921)
chr3 (19-311)||(47649737-47650028)
chr3 (26-311)||(25795947-25796230)
chr3 (149-311)||(40592543-40592701)
chr3 (149-311)||(1736065-1736223)
chr3 (149-311)||(21711390-21711547)
chr3 (133-311)||(21353729-21353909)
chr3 (152-311)||(36029261-36029415)
chr3 (149-311)||(6794476-6794633)
chr3 (149-311)||(8370250-8370407)
chr3 (149-311)||(47923665-47923823)
chr3 (150-311)||(48438383-48438539)
chr3 (167-311)||(3323469-3323610)
chr3 (149-311)||(24694927-24695085)
chr3 (167-311)||(1417269-1417410)
chr3 (152-312)||(16264516-16264671)
chr3 (149-302)||(27974713-27974861)
chr3 (149-302)||(27986217-27986365)
chr3 (151-311)||(35925646-35925803)
chr3 (149-312)||(39032316-39032473)
chr3 (149-311)||(37466462-37466620)
chr3 (149-308)||(26299157-26299313)
chr3 (167-311)||(25929174-25929316)
chr3 (149-307)||(3328118-3328272)
chr3 (189-311)||(8126797-8126917)
chr3 (149-302)||(33386436-33386584)
chr3 (105-261)||(4386693-4386846)
chr3 (149-302)||(27453137-27453283)
chr3 (149-302)||(26928360-26928508)
chr3 (223-311)||(18552716-18552804)
chr3 (149-302)||(32143500-32143648)
chr3 (167-311)||(40844817-40844963)
chr3 (149-275)||(37725878-37726000)
chr3 (25-249)||(9666664-9666887)
chr3 (220-311)||(30709617-30709708)
chr3 (189-275)||(1306153-1306239)
chr3 (25-131)||(44700804-44700911)
chr3 (149-249)||(23392106-23392203)
chr3 (149-259)||(27026925-27027031)
chr3 (149-246)||(23410529-23410623)
chr3 (149-259)||(27038270-27038376)
chr3 (233-311)||(5366164-5366243)
chr3 (149-247)||(40735258-40735352)
chr3 (149-249)||(5236653-5236749)
chr3 (149-249)||(29812938-29813034)
chr3 (156-249)||(39153558-39153647)
chr3 (223-311)||(21156596-21156685)
chr3 (187-255)||(2671387-2671455)
chr3 (187-255)||(8477592-8477660)
chr3 (187-255)||(8738864-8738932)
chr3 (187-255)||(9091102-9091170)
chr3 (187-255)||(40372597-40372665)
chr3 (149-247)||(7762141-7762235)
chr3 (54-107)||(28074177-28074231)
chr3 (220-249)||(9581225-9581254)
chr3 (220-249)||(19684086-19684115)
chr3 (220-249)||(29682301-29682330)
chr3 (220-249)||(29810810-29810839)
chr3 (169-249)||(32890998-32891074)
chr3 (220-249)||(40734440-40734469)
chr3 (220-249)||(44331487-44331516)
[»] chr4 (51 HSPs)
chr4 (25-311)||(3793725-3794010)
chr4 (108-311)||(24333978-24334180)
chr4 (149-311)||(3777716-3777874)
chr4 (149-311)||(5268972-5269130)
chr4 (149-311)||(5112404-5112563)
chr4 (149-311)||(16623065-16623222)
chr4 (149-311)||(10047548-10047706)
chr4 (169-311)||(16628663-16628801)
chr4 (151-311)||(42599349-42599504)
chr4 (149-311)||(25861805-25861964)
chr4 (149-311)||(39774076-39774235)
chr4 (149-302)||(5396443-5396591)
chr4 (149-311)||(6743187-6743344)
chr4 (149-311)||(38152209-38152367)
chr4 (103-249)||(6542378-6542521)
chr4 (151-312)||(8689270-8689426)
chr4 (149-311)||(36315002-36315159)
chr4 (149-311)||(36329211-36329368)
chr4 (152-302)||(5143437-5143582)
chr4 (149-302)||(31985405-31985553)
chr4 (149-311)||(1983071-1983231)
chr4 (149-311)||(54867347-54867504)
chr4 (103-249)||(51336892-51337035)
chr4 (151-302)||(5147855-5148001)
chr4 (23-249)||(52467551-52467776)
chr4 (190-311)||(18377526-18377645)
chr4 (26-131)||(36463714-36463820)
chr4 (149-275)||(28468306-28468430)
chr4 (163-249)||(48893839-48893924)
chr4 (150-249)||(4587832-4587929)
chr4 (26-114)||(46147685-46147774)
chr4 (149-247)||(9927656-9927750)
chr4 (149-249)||(48142917-48143013)
chr4 (149-249)||(52082854-52082950)
chr4 (160-311)||(37782030-37782179)
chr4 (149-249)||(5429554-5429650)
chr4 (149-249)||(26175833-26175929)
chr4 (149-249)||(52095559-52095655)
chr4 (233-311)||(34670517-34670595)
chr4 (24-137)||(45687503-45687617)
chr4 (149-249)||(29254369-29254465)
chr4 (187-255)||(24742168-24742236)
chr4 (207-249)||(36463586-36463626)
chr4 (156-249)||(13009628-13009717)
chr4 (187-255)||(29760868-29760937)
chr4 (220-249)||(5871762-5871791)
chr4 (220-249)||(45687380-45687409)
chr4 (149-202)||(52093905-52093957)
chr4 (220-303)||(873356-873440)
chr4 (169-247)||(6677362-6677438)
chr4 (19-71)||(24334460-24334511)
[»] chr6 (28 HSPs)
chr6 (48-311)||(21801010-21801274)
chr6 (102-308)||(14521843-14522050)
chr6 (149-311)||(24435744-24435901)
chr6 (149-311)||(31979680-31979837)
chr6 (149-311)||(31936744-31936900)
chr6 (152-290)||(5017271-5017405)
chr6 (149-311)||(5572015-5572172)
chr6 (149-311)||(31086246-31086403)
chr6 (149-284)||(5757250-5757380)
chr6 (150-311)||(22963867-22964023)
chr6 (150-311)||(23824370-23824526)
chr6 (149-311)||(31076707-31076866)
chr6 (213-311)||(4630121-4630218)
chr6 (223-311)||(18233014-18233101)
chr6 (149-280)||(22709208-22709335)
chr6 (195-292)||(21356224-21356318)
chr6 (240-311)||(10077027-10077098)
chr6 (189-308)||(5385765-5385881)
chr6 (187-275)||(5674571-5674660)
chr6 (167-238)||(21272778-21272846)
chr6 (149-215)||(10076963-10077027)
chr6 (54-130)||(3039228-3039305)
chr6 (149-249)||(9183228-9183324)
chr6 (221-311)||(33721398-33721488)
chr6 (149-218)||(18234341-18234408)
chr6 (149-249)||(33211382-33211478)
chr6 (220-249)||(28137605-28137634)
chr6 (207-246)||(3039103-3039140)
[»] chr7 (47 HSPs)
chr7 (25-311)||(29159972-29160256)
chr7 (30-311)||(5816923-5817200)
chr7 (149-311)||(20284256-20284414)
chr7 (149-311)||(23402785-23402943)
chr7 (149-311)||(46516077-46516235)
chr7 (151-311)||(4796443-4796598)
chr7 (149-311)||(2580557-2580714)
chr7 (149-311)||(3047421-3047580)
chr7 (169-311)||(9184965-9185104)
chr7 (149-311)||(9189778-9189937)
chr7 (149-311)||(2647469-2647627)
chr7 (149-311)||(33332222-33332380)
chr7 (149-302)||(2479513-2479661)
chr7 (151-275)||(21989111-21989231)
chr7 (149-292)||(47263853-47263991)
chr7 (149-271)||(44847897-44848015)
chr7 (220-311)||(49091830-49091921)
chr7 (195-309)||(9235398-9235510)
chr7 (220-313)||(35960982-35961075)
chr7 (149-275)||(18413843-18413967)
chr7 (149-275)||(21640013-21640137)
chr7 (232-311)||(56116-56195)
chr7 (149-275)||(21646211-21646335)
chr7 (219-302)||(21983463-21983545)
chr7 (149-275)||(18408967-18409091)
chr7 (25-114)||(22269505-22269595)
chr7 (25-114)||(24526226-24526316)
chr7 (149-249)||(43864119-43864215)
chr7 (149-249)||(49091918-49092014)
chr7 (54-131)||(8153107-8153185)
chr7 (187-275)||(1533245-1533334)
chr7 (149-249)||(31733166-31733262)
chr7 (74-139)||(36146727-36146792)
chr7 (149-249)||(47676333-47676429)
chr7 (156-249)||(38671419-38671508)
chr7 (152-249)||(48489309-48489402)
chr7 (54-138)||(41317753-41317838)
chr7 (187-255)||(2058196-2058264)
chr7 (150-249)||(18126520-18126615)
chr7 (149-256)||(19502053-19502156)
chr7 (220-250)||(41649206-41649236)
chr7 (149-210)||(79654-79713)
chr7 (220-249)||(4586103-4586132)
chr7 (149-249)||(24526094-24526190)
chr7 (149-202)||(30024973-30025025)
chr7 (149-245)||(4253730-4253823)
chr7 (187-255)||(20357348-20357416)
[»] scaffold0006 (3 HSPs)
scaffold0006 (149-312)||(5851-6010)
scaffold0006 (167-312)||(2660-2802)
scaffold0006 (149-302)||(133051-133199)
[»] scaffold0477 (1 HSPs)
scaffold0477 (25-217)||(5601-5794)
[»] scaffold0087 (2 HSPs)
scaffold0087 (149-302)||(36604-36752)
scaffold0087 (149-302)||(43733-43881)
[»] scaffold0140 (1 HSPs)
scaffold0140 (149-302)||(8189-8337)
[»] scaffold0036 (1 HSPs)
scaffold0036 (151-311)||(85850-86006)
[»] scaffold0098 (1 HSPs)
scaffold0098 (149-302)||(45375-45524)
[»] scaffold0188 (2 HSPs)
scaffold0188 (149-275)||(17720-17844)
scaffold0188 (149-275)||(23813-23937)
[»] scaffold0078 (1 HSPs)
scaffold0078 (149-311)||(23698-23858)
[»] scaffold0176 (1 HSPs)
scaffold0176 (149-263)||(17466-17576)


Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 23 - 311
Target Start/End: Complemental strand, 31056499 - 31056210
Alignment:
Q  23 cagataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggctt 121  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||| ||||||||||| ||||||| ||||| ||||||    
T  31056499 cagataaggtataatattgtactatgacctgctccatcgtggcacgatgggatcgtaacgtggcacgatgttgcgtatttctgaacactatttaaggctt 31056400  T
Q  122 atttcttcatcttttgg-gtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgag 220  Q
     ||||||||| |||| | ||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  31056399 ctttcttcatttttttgagtgtggctttgagagagaaacttgggaatacaaaggaggtaacttgaggg-ttgagtgtctttgtagtgaggttctcttgag 31056301  T
Q  221 ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||    
T  31056300 ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattcat 31056210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 8040525 - 8040230
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttag 117  Q
    ||||| ||||||||||| || ||||||||||||||||||||||| |||||||||| ||||||||||||||| || || ||||||||||||| ||||| ||    
T  8040525 gtagcggataaggtatagtactgtactatcacctgctccatcgtggcacgatggggtcgaaacgtggcacgatgctgtgtattcctgaacactatttaag 8040426  T
Q  118 gcttatttcttcatc--ttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctc 215  Q
    ||||||||||||||   |||| |||||||| ||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  8040425 gcttatttcttcattattttttggtgtggctttgagagagaaacttggtaatacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaagttctc 8040327  T
Q  216 ttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgt-attttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |  ||||||||||||||||||    
T  8040326 ttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgtttttctcttaggattcat 8040230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 34681970 - 34682262
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttag 117  Q
    ||||| ||||||||||| ||||||||||||||||||| ||| || |||||||||| ||||||||||||||| || |||||||||||||||| ||||| ||    
T  34681970 gtagcggataaggtatagtattgtactatcacctgcttcattgtggcacgatggggtcgaaacgtggcacgatgctgcgtattcctgaacactatttaag 34682069  T
Q  118 gcttatttcttcatcttttgg-gtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctct 216  Q
    |||| ||||||||| |||| | ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  34682070 gcttctttcttcatttttttgtgtgtggctttgagagagaaacttgggaatacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctct 34682168  T
Q  217 tgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattca 310  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||| | || ||||||| |||||||||||||||||    
T  34682169 tgagagttggaaaacattgtaaacaccttgggtagtgagatttcaccacttgaaggatcaaaatgtttccttttgtgttttctcttaggattca 34682262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 42269825 - 42269605
Alignment:
Q  23 cagataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggctt 121  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||||||||||||| || |||||||||||||||| ||||| ||||||    
T  42269825 cagataaggtatagtattgtactatcacctgctccatcgtggcacgatgggcacgaaacgtggcacgatgctgcgtattcctgaacactatttaaggctt 42269726  T
Q  122 atttcttcatcttttgg-gtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgag 220  Q
     |||||| || |||| | ||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||    
T  42269725 ctttctttatttttttgagtgtggctttgagagagaaacttgggaatacaaaggaggtaactttaagg-ttgagtgtctttgtagtgaggttctcttgag 42269627  T
Q  221 ggttgggaaacattgtaaacac 242  Q
    ||||||||||||||||||||||    
T  42269626 ggttgggaaacattgtaaacac 42269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 33528396 - 33528554
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||||    
T  33528396 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacacattggg 33528491  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  33528492 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 33528554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 151 - 311
Target Start/End: Complemental strand, 21630268 - 21630112
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||| | ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  21630268 gagagaaacttgg-attacaaaggaggtaactttagtg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggta 21630173  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  21630172 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 21630112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 151 - 311
Target Start/End: Complemental strand, 34389174 - 34389018
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| ||| ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  34389174 gagagaaacttgg-attacaaaggaggtaactttaggg-ttgtgtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggta 34389079  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  34389078 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 34389018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 14698781 - 14698939
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||    
T  14698781 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctctcg--ggttgggaaacattgtaaacaccttggg 14698876  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  14698877 tagtgagatttcactattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 14698939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 133 - 311
Target Start/End: Original strand, 2837782 - 2837960
Alignment:
Q  133 ttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca 232  Q
    |||||||  |||| || |||||||||| |  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2837782 ttttgggattggctttaagagagaaacctaagaatacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttgagggttgggaaaca 2837880  T
Q  233 ttgtaaacaccttgggtagtgag-atttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||| ||||||| |||||||||||||||||||  ||||  || |||| || ||||||||||||||||||    
T  2837881 ttgtaaacaccttggatagtgagaatttcaccattggaaggataaaaaatattcctttagtgttttctcttaggattcat 2837960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 33118460 - 33118302
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||    
T  33118460 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttggggaacattgtaaacaccttggg 33118365  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| |||||||||| |||||||    
T  33118364 tagtgagatttcgccattggaaggatcaaaaagcttccttttgtgttttctcttaagattcat 33118302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 13569654 - 13569496
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||| ||||||||||| || |||||||||||||||||| |||||||  |||||||||||||| ||||||||||||     
T  13569654 gagagagaaacttgg-attacaaatgagataactttaggg-ttaagtgtctttgtagtgaggatctcttg--ggttgggaaacattataaacaccttgga 13569559  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  13569558 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 13569496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 17865513 - 17865372
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 266  Q
    |||||| ||||||||||||||| ||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||| | |    
T  17865513 tacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaagatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcacaaat 17865417  T
Q  267 ggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
     |||||||| |||||||| ||||||| ||||||||||||||||||    
T  17865416 agaaggatcaaaaagcttccttttgtgttttctcttaggattcat 17865372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 10445239 - 10445378
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||| | | |||||| ||||||||||||||| |||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  10445239 gagagagaaacttag-attacaaaggaggtaactttaggg-ttgaatgtctttgtagtgaggttctctcg--ggttgggaaacattgtaaacaccttggg 10445334  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgt 292  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  10445335 tagtgagatttcaccattggaaggatcaaaaagcttccttttgt 10445378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 167 - 302
Target Start/End: Original strand, 36757551 - 36757682
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 266  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36757551 tacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 36757647  T
Q  267 ggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||| |||||||| ||||||| | |||||||    
T  36757648 ggaaggatc-aaaagcttccttttgtgtcttctctt 36757682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 28258949 - 28259097
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||| |||||||| |||||||  ||||||||||||||||||||| ||||||    
T  28258949 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttatagtgaggatctcttg--ggttgggaaacattgtaaacatcttggg 28259044  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  28259045 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 28259097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 10707024 - 10707182
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||| | | |||||| ||||||||||||||| || | | |||||||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  10707024 gagagagaaacttag-attacaaaggaggtaactttagggttt-attatctttgtagtgaggatctcttg--ggttgagaaacattgtaaacaccttggg 10707119  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||| ||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||||    
T  10707120 tagttagatttcaccattagaaggatcaaaaagcttccttttgtgttttctcttaggattcat 10707182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 1344299 - 1344435
Alignment:
Q  133 ttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca 232  Q
    ||||||||||||| ||||||||||||| |  ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  1344299 ttttgggtgtggctttgagagagaaacctatgaatacaaatgaggtaattttaggg-ttgagtgtctttgtagtgaggttctcttga-ggttgggaaaca 1344396  T
Q  233 ttgtaaacaccttgggtagtgag-atttcaccattggaa 270  Q
    ||||||||| ||| ||||||||| |||||||||||||||    
T  1344397 ttgtaaacatcttcggtagtgagaatttcaccattggaa 1344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 154 - 311
Target Start/End: Original strand, 2869468 - 2869622
Alignment:
Q  154 agaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtg 253  Q
    |||||||||  |||||||| ||| |||||||| || |||||||||||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||    
T  2869468 agaaacttgaaaatacaaaggagataactttacgg-ttgagtgtctttgtagtgaggttctcttgag--ttggaaaacattgtaaacacattgggtagtg 2869564  T
Q  254 agatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||| |||||||||| ||| |||||||| | || || ||||||||||||||||||    
T  2869565 agatttcgccattggaagaatcaaaaagcttccgttagtgttttctcttaggattcat 2869622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 39483230 - 39483100
Alignment:
Q  178 taactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcga 277  Q
    ||||||||||| |||||||||||||| |||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |    
T  39483230 taactttaggg-ttgagtgtctttgttgtgaggatctcttg--ggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaatgatcaa 39483134  T
Q  278 aaagctttcttttgtattttctcttaggattcat 311  Q
    ||| ||| ||||||| ||||||||||||||||||    
T  39483133 aaaacttccttttgtgttttctcttaggattcat 39483100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 149 - 308
Target Start/End: Complemental strand, 40015250 - 40015095
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| || ||  |||||| ||||||||||||||| |||||||| |||||| |||||||||||||  |||||||||||||||||||||| ||||     
T  40015250 gagagagaaatttaggtttacaaaggaggtaactttaggg-ttgagtgt-tttgtattgaggttctcttg--ggttgggaaacattgtaaacacattgga 40015155  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggatt 308  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  ||| ||||||||||    
T  40015154 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgatttttcttaggatt 40015095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 8389921 - 8390079
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||| ||||||||||| ||||| ||||||||||||| | |||||||  |||| ||||||||||||||||||||||     
T  8389921 gagagagaaacttgg-attacaaaggagataactttaggg-ttgagggtctttgtagtgatgatctcttg--ggttaggaaacattgtaaacaccttgga 8390016  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||| ||||||||||| ||| |||||||| || |||| ||||||||||||||||||    
T  8390017 tagtgagattttaccattggaagaatcaaaaagcttcctcttgtgttttctcttaggattcat 8390079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 20522547 - 20522389
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||| | | |||||| ||||||||||||||| ||||||||||||||||||||  |||||||  ||||||||| ||||||||||| ||||||    
T  20522547 gagagagaaacttag-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgagtatctcttg--ggttgggaagcattgtaaacaacttggg 20522452  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||| ||| |||| |||||||| ||||||| |||| |||||||| ||||    
T  20522451 tagtgagatttcaccatttgaatgatcaaaaagcttccttttgtgttttttcttaggactcat 20522389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 23078245 - 23078401
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||| ||| ||||||||||||||  ||||  |||||||  ||||||||||||||||||||||||||||||    
T  23078245 gagagaaacttgg-attacaaaggaggtaacttttggg-ttgagtgtctttgtgatgagaatctcttg--ggttgggaaacattgtaaacaccttgggta 23078340  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||| ||||||||||||| |||||||| ||||||| | |||||||||| ||||||    
T  23078341 gtgagatttcatcattggaaggatc-aaaagcttccttttgtgtcttctcttagggttcatc 23078401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 150 - 302
Target Start/End: Complemental strand, 40739158 - 40739011
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  40739158 agagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggt 40739063  T
Q  250 agtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    | |||||||||||||||||||||||| |||||||| || |||| | |||||||    
T  40739062 aatgagatttcaccattggaaggatc-aaaagcttactattgtgtcttctctt 40739011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 15903661 - 15903820
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| |||||  |||||| |||||||| || ||| |||| ||||||||||||||||||||||||  |||| ||||||||||||||||| ||||     
T  15903661 gagagagaaatttgggtttacaaatgaggtaacctttggg-ttgaatgtctttgtagtgaggttctcttg--ggttaggaaacattgtaaacacattgga 15903757  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    || ||||||||||||||||||| |||  ||||| |||||||||| ||||||| ||||||||||    
T  15903758 taatgagatttcaccattggaatgataaaaaagatttcttttgtgttttctcataggattcat 15903820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 311
Target Start/End: Complemental strand, 35397861 - 35397677
Alignment:
Q  124 ttcttcatcttttgggtgtggcattgagagagaaacttgggaa-tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgaggg 222  Q
    |||||||| ||||| ||||||  | ||||||||||||||  || |||||| ||||| ||||||||| |||| ||||||||||||||||||||  ||  ||    
T  35397861 ttcttcatgttttgtgtgtggtttagagagagaaacttgaaaaatacaaaggaggtcactttaggg-ttgattgtctttgtagtgaggttcttctg--gg 35397765  T
Q  223 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||| || | |||    |||||||||||||||||||||||    
T  35397764 ttggaaaacattgtaattaccttgggtagtgagatttcaccattggaaggatc-aataacttcaaattgtattttctcttaggattcat 35397677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 3492079 - 3491955
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| || | ||||| ||||||||||||||||||||| |||||||  |||||| |||  ||||||||||||||||    
T  3492079 gagagagaaacttgg-attacaaaggagggaaatctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttggaaaaaacattgtaaacaccttg 3491984  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||| ||||||||||||||||    
T  3491983 ggtagtgagattccaccattggaaggatc 3491955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 25409922 - 25409842
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccattg 267  Q
    ||||||||||||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25409922 gggttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattg 25409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 33162743 - 33162647
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||| ||||||| ||||| ||||||| | |  ||||||||||||  ||||||||||||||||||||||||||    
T  33162743 gagagagaaacttgggaaatcaaaggaggtaattttaggg-ttgagggtctttg-attagggttctcttgag--ttgggaaacattgtaaacaccttggg 33162648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 39284760 - 39284856
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||||||||||||||||||    
T  39284760 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgtaaacaccttggg 39284855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 36773326 - 36773533
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttgggtgtggcatt--ga 150  Q
    ||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||| ||||| || |||  |||||||| |||||  |   || |   ||    
T  36773326 ctccatcgtggcacgatgggctcgaaacgtggcacgatgtcgcgtattcctgaacactatttaagacttcattcttcattttttgtatagagcttcaaga 36773425  T
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgaggg-----------ttgggaaacattgtaaa 239  Q
    |||||||||| |||||  |||| ||||||||||||||| ||||| ||||||| | |  ||||||||||||||           |||||||||||||||||    
T  36773426 gagagaaactagggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attagggttctcttgaggggttctcttgggttgggaaacattgtaaa 36773523  T
Q  240 caccttgggt 249  Q
    ||||||||||    
T  36773524 caccttgggt 36773533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 259
Target Start/End: Original strand, 41586322 - 41586429
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttggg 248  Q
    |||||||||||||| ||  || | || |||||||||||| |||||||||||||  | ||| ||||||||  |||||| ||||| ||||||||||||||||    
T  41586322 agagagaaacttggtaaatcagatgatgtaactttaggg-ttgagtgtctttggtgagagcttctcttg--ggttggaaaacagttgtaaacaccttggg 41586418  T
Q  249 tagtgagattt 259  Q
    |||||||||||    
T  41586419 tagtgagattt 41586429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 311
Target Start/End: Complemental strand, 3278307 - 3278167
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattg 267  Q
    |||| ||||||||||||||| |||||| || |||  | ||| ||||||||  |||||| ||||||| ||||||||||||| |||||||||||||  || |    
T  3278307 caaatgaggtaactttaggg-ttgagtatcgttgatgagagattctcttg--ggttggaaaacatttgtaaacaccttggatagtgagatttcattatag 3278211  T
Q  268 gaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    || ||||| |||| ||| |||| |  |||||||||||| |||||    
T  3278210 gacggatcaaaaaacttcctttagcgttttctcttagggttcat 3278167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 18674239 - 18674330
Alignment:
Q  220 gggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||| |||||||||||| | ||||||||||||  ||| |||||||| |||||||| ||||  | |||||||||| |||||||    
T  18674239 gggttgggaaacattcgtaaacaccttgagcagtgagatttcattatt-gaaggatcaaaaagcttcctttaatgttttctcttatgattcat 18674330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 36988368 - 36988274
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||| |||||||||||||    
T  36988368 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacatagtaaacaccttgg 36988274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 11151877 - 11151788
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  11151877 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 11151788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 11690383 - 11690472
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| ||||||| | |   |||||||||  |||||||||||||||||||||||||||||    
T  11690383 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attatagttctcttg--ggttgggaaacattgtaaacaccttgggt 11690472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 42362234 - 42362323
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  42362234 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 42362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 9296203 - 9296292
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcaccattggaaggatc 275  Q
    |||||||||||||||||||  ||  ||| |||  ||||||||||  |||||||| ||||||||||||||| || ||||||||||||||||||    
T  9296203 gggttgagtgtctttgtagaaagtgtctattg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc 9296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 36318302 - 36318206
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| ||||||| |||||||| | |   ||| ||||  ||||||||||| |||||||||||||||||    
T  36318302 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgaatgtctttg-attagagttatctt--gggttgggaaatattgtaaacaccttggg 36318207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 11098728 - 11098796
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  11098728 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 11098796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 28770613 - 28770704
Alignment:
Q  221 ggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||| ||||||| ||||||||||||||||||||||| |||  |   |||||||  ||||| || |||| || ||||||||||||||||||    
T  28770613 ggttggaaaacatttgtaaacaccttgggtagtgagatctcattagctgaaggataaaaaagtttcctttagtgttttctcttaggattcat 28770704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 724030 - 723941
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| |||| |||  |||||||||||||||||||||||||||||    
T  724030 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttcttttg--ggttgggaaacattgtaaacaccttgggt 723941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 14202693 - 14202604
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| |||||||||||| || ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  14202693 aaacttgggaaatcaaatgaggtaactttatgg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 14202604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 33162848 - 33162802
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatg 71  Q
    |||||||||||  |||||||||||||| |||||||||| ||||||||    
T  33162848 gataaggtatagcattgtactatcacccgctccatcgtggcacgatg 33162802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 14634052 - 14634023
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  14634052 gggttgggaaacattgtaaacaccttgggt 14634023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 24885603 - 24885632
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  24885603 gggttgggaaacattgtaaacaccttgggt 24885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 29867811 - 29867840
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  29867811 gggttgggaaacattgtaaacaccttgggt 29867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 34139997 - 34139968
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  34139997 gggttgggaaacattgtaaacaccttgggt 34139968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 249
Target Start/End: Original strand, 11067248 - 11067276
Alignment:
Q  221 ggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||||||||||||||||    
T  11067248 ggttgggaaacattgtaaacaccttgggt 11067276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 12633010 - 12632959
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtcttt 201  Q
    ||||||||||||||||||  |||| ||| |||||||| |||||||||||||||    
T  12633010 gagagagaaacttgggaaaccaaaggagataacttta-gggttgagtgtcttt 12632959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 23 - 311
Target Start/End: Original strand, 40816458 - 40816746
Alignment:
Q  23 cagataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggctt 121  Q
    ||||||||||||| || |||||| |||||||||||| ||| ||||||||||  || ||||||||||| || ||||||||||||| || ||||| ||||||    
T  40816458 cagataaggtatagtactgtactgtcacctgctccaacgtggcacgatgggcacgtaacgtggcacgatgctgcgtattcctgatcactatttaaggctt 40816557  T
Q  122 atttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagg 221  Q
     ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40816558 ctttcttcatcttttgtgtgtggctttgagagagaaacttgggaatacaaaggaggtaacttgaggg-ttgagtgtctttgtagtgaggttctcttgagg 40816656  T
Q  222 gttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  40816657 gttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 40816746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 27 - 311
Target Start/End: Complemental strand, 19073380 - 19073095
Alignment:
Q  27 taaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttattt 125  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||| ||||| |||||| |||    
T  19073380 taaggtatagtattgtactatcacctgctccatcgtggcacgatagggttgaaacgtggcacgatgttgcgtattcctgaacactatttaaggcttcttt 19073281  T
Q  126 cttcatcttttgg-gtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggtt 224  Q
    |||||| |||| | ||||||  |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  19073280 cttcatttttttgagtgtggttttgagagagaaacttgggaatacaaaggaggtaacttgaggg-ttgagtgtctttgtagtgaggttctcttgagggtt 19073182  T
Q  225 gggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||    
T  19073181 gggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcat 19073095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 27 - 311
Target Start/End: Complemental strand, 19121270 - 19120985
Alignment:
Q  27 taaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttattt 125  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||| ||||| |||||| |||    
T  19121270 taaggtatagtattgtactatcacctgctccatcgtggcacgatagggttgaaacgtggcacgatgttgcgtattcctgaacactatttaaggcttcttt 19121171  T
Q  126 cttcatcttttgg-gtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggtt 224  Q
    |||||| |||| | ||||||  |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  19121170 cttcatttttttgagtgtggttttgagagagaaacttgggaatacaaaggaggtaacttgaggg-ttgagtgtctttgtagtgaggttctcttgagggtt 19121072  T
Q  225 gggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||    
T  19121071 gggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcat 19120985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 47703574 - 47703865
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttag 117  Q
    ||||| ||||||||||| || |||||||| |||||||||||||| ||||||| ||||| ||| |||||||| ||||||||||| ||||||| ||||| ||    
T  47703574 gtagcggataaggtatagtactgtactat-acctgctccatcgtggcacgattgggtcaaaatgtggcacgatgttgcgtatttctgaacactatttaag 47703672  T
Q  118 gcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctctt 217  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  47703673 gcttctttcttcatcttttgtgtgtggctttgagagagaaacttgagaatacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctctt 47703771  T
Q  218 gagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||| ||||||| ||||||||||||||||||    
T  47703772 gagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgataaaaaaacttccttttgtgttttctcttaggattcat 47703865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 47102611 - 47102769
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  47102611 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 47102706  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  47102707 tagtgagatttcatcattggaaggatcaaaaagctttcttttgtgttttttcttaggattcat 47102769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 47098597 - 47098755
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  47098597 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagcgaggttctcttg--ggttgggaaacattgtaaacaccttggg 47098692  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||| |||||    
T  47098693 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttttcttaggtttcat 47098755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 29652137 - 29651980
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||    
T  29652137 agagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatcttttg--ggttgggaaacattgtaaacaccttgggt 29652042  T
Q  250 agtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||    
T  29652041 agtgagatttcaccattggaaggatcaaaaagtttccttttgtgttttctcttaggattcat 29651980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 149 - 312
Target Start/End: Complemental strand, 13598725 - 13598566
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| |||| | |||||| |||||||||||| || ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  13598725 gagagagaaaattgg-attacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaggatctcttg--ggttggcaaacattgtaaacaccttggg 13598630  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  13598629 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatc 13598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 3282030 - 3281874
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| |||||||||||| || ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  3282030 gagagaaacttgg-attacaaatgaggtaactttatgg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggta 3281935  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||| | |||||||||| ||||||    
T  3281934 gtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttagggttcatc 3281874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 22819756 - 22819596
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||  |||||| ||||||||||||||  || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  22819756 agagagaaacttgggtttacaaaggaggtaactttaggattt-agtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggt 22819660  T
Q  250 agtgagatttcaccattggaaggatcgaaaagctttcttt--tgtattttctcttaggattcat 311  Q
    ||| | |||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||    
T  22819659 agttacatttcaccattggaaggatcaaaaagcttccttttgtgttttttctcttaggattcat 22819596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 32889763 - 32889607
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||||| | |||  ||||||||||||||||||||||||||||    
T  32889763 gagagagaaacttgg-attgcaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggtttttttg--ggttgggaaacattgtaaacaccttggg 32889668  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||| || |||||| ||||||||| ||||||||||||||||||    
T  32889667 tagtgagatttcaccattggaaggttc-aaaagc-ttcttttgtgttttctcttaggattcat 32889607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 310
Target Start/End: Complemental strand, 9476587 - 9476430
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||| ||| |||| |||||||||||||||||||||||   ||||||||||||||||||||| ||||||    
T  9476587 gagagagaaacttgg-attacaaaggaggtaacttttggg-ttgaatgtctttgtagtgaggttctcttt--ggttgggaaacattgtaaacatcttggg 9476492  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattca 310  Q
    |||||||||||||||||| |||||||| |||||||| ||||||| |||||||||| ||||||    
T  9476491 tagtgagatttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaagattca 9476430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 13604394 - 13604542
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  13604394 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtatctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 13604489  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  13604490 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 13604542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 21536344 - 21536500
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||||||   |||||| |||||||||||||||||||||||    
T  21536344 gagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctctta--ggttggaaaacattgtaaacaccttgggta 21536439  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    || ||||||||||||||||||||||| ||||||| ||||||| | |||||||||| ||||||    
T  21536440 gtaagatttcaccattggaaggatcg-aaagcttccttttgtgtcttctcttagggttcatc 21536500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 310
Target Start/End: Original strand, 27104174 - 27104330
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||||||||||| || |||||||||||||||||||||| ||||||  |||||||||||||| ||| |||||||||    
T  27104174 gagagagaaacttgg-attacaaaggaggtaactttaagg-ttgagtgtctttgtagtgaggt-ctcttg--ggttgggaaacattataagcaccttggg 27104268  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattca 310  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||| ||||||    
T  27104269 tagtgagatttcaccattggaagaatcaaaaagcttccttttgtgttttctcttaagattca 27104330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 37070092 - 37069944
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||||||||||| || ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||     
T  37070092 gagagagaaacttgg-attacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgga 37069997  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    || |||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  37069996 taatgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 37069944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 149 - 312
Target Start/End: Original strand, 26644670 - 26644828
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||| ||| ||||||| ||||||||||||||||||| | ||| |||  |||||||||||||||||||||||||| |    
T  26644670 gagagagaaacttgg-attacaaaggagataattttaggg-ttgagtgtctttgtagtgaagatcttttg--ggttgggaaacattgtaaacaccttgag 26644765  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||||| ||||||    
T  26644766 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttagggttcatc 26644828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 16124353 - 16124444
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  16124353 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 16124444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 9022678 - 9022834
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||  |||||| |||||| |||| ||  |||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||  |    
T  9022678 gagagagaaacttgggtttacaaaggaggtatcttttgg--ttgaatgtctttgtagtgaggttctcttg--ggttgagaaacattgtaaacacctttcg 9022773  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||  |||||||| |  |||  ||||||||||||||||||    
T  9022774 tagtgagatttcaccattggaaggataaaaaagcttcc--ttgagttttctcttaggattcat 9022834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 19358612 - 19358735
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa-cattgtaaacaccttgg 247  Q
    ||||||||||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| ||| |||  |||||||||| |||||||||||||||||    
T  19358612 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatcttttg--ggttgggaaaacattgtaaacaccttgg 19358707  T
Q  248 gtagtgagatttcaccattggaaggatc 275  Q
    ||||||||||||||||||||||||||||    
T  19358708 gtagtgagatttcaccattggaaggatc 19358735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 19361201 - 19361324
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa-cattgtaaacaccttgg 247  Q
    ||||||||||||| | | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  |||||||||| |||||||||||||||||    
T  19361201 gagagagaaacttag-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaaacattgtaaacaccttgg 19361296  T
Q  248 gtagtgagatttcaccattggaaggatc 275  Q
    ||||||||||||||||||||||||||||    
T  19361297 gtagtgagatttcaccattggaaggatc 19361324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 19366076 - 19366200
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacat--tgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  |||||||||| ||  |||||||||||||    
T  19366076 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaatattgtaaacaccttg 19366171  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  19366172 ggtagtgagatttcaccattggaaggatc 19366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 24202537 - 24202661
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||||||||| |||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||||||    
T  24202537 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttg 24202632  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    ||||||||||| |||||||||||||||||    
T  24202633 ggtagtgagatctcaccattggaaggatc 24202661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 220
Target Start/End: Original strand, 17345219 - 17345402
Alignment:
Q  41 gtactatcacctgctccatcgtagcacgatgggtcgaaacgtggcacggtgttgcgtattc----ctgaacattattttaggcttatttcttcatctt-t 135  Q
    ||||||| |||| ||||||||| ||||||||  |  |||||||||||| |||||||| |||    ||||||| ||||| ||||||  |||||||  || |    
T  17345219 gtactattaccttctccatcgtggcacgatgtatgaaaacgtggcacgatgttgcgtgttcgatcctgaacactatttaaggcttcattcttcaatttat 17345318  T
Q  136 tgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgag 220  Q
    || ||||||| | ||||| ||||| || ||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||    
T  17345319 tgagtgtggcttagagagggaaacatgagaatacaaaggaggtacatttaggg-ttgagtgtctttgtagtgaggttctcttgag 17345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 45644746 - 45644660
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttggg 139  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||  |||||||| |||||||    
T  45644746 ctccatcgtagcacgatgggctcgaaacgtggcacgatgttgcgtattcctgaacactatttaaggctttattcttcattttttggg 45644660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 41360807 - 41360886
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||| ||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  41360807 caaaggaggtaactttaggg-ttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaaacatcttgggt 41360886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 19379917 - 19379964
Alignment:
Q  228 aaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19379917 aaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 19379964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 50169601 - 50169407
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttgggtgtggcat--tga 150  Q
    ||||||||| |||||||||| || |||||||||||| || |||||||||||||||| ||||| ||||||  |||||||| ||||||     || |   ||    
T  50169601 ctccatcgtggcacgatgggctcaaaacgtggcacgatgctgcgtattcctgaacactatttaaggcttcattcttcattttttggtaagagcttcaaga 50169502  T
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||| |||||  |||| |||||||||||| |||||||| || ||| || |  |||| ||||  |||||||||||||||||||| |||||||||    
T  50169501 gagagaaactagggaaatcaaaggaggtaacttta-gggttgagggt-tttttattagggttatctt--gggttgggaaacattgtaaataccttgggt 50169407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 3189206 - 3189300
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | | | ||||||||  ||||||||||||||||||||||||||||    
T  3189206 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attaaagttctctt--gggttgggaaacattgtaaacaccttgg 3189300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 3198023 - 3198117
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | | | ||||||||  ||||||||||||||||||||||||||||    
T  3198023 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attaaagttctctt--gggttgggaaacattgtaaacaccttgg 3198117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 3206862 - 3206956
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | | | ||||||||  ||||||||||||||||||||||||||||    
T  3206862 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attaaagttctctt--gggttgggaaacattgtaaacaccttgg 3206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 15820182 - 15820278
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||||||  ||||||||||||||||| |||||||| ||||||| | |   ||||||||||  |||||||||||||||||||||||||||    
T  15820182 gagagaaaaacttgggaaatcaaaagaggtaacttta-gggttgagggtctttg-attagagttctcttga--gttgggaaacattgtaaacaccttggg 15820277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 50167579 - 50167494
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttgg 138  Q
    ||||||||| |||||||||| ||||||||||||||| || | |||||||||||||| ||||| ||||||  |||||||| ||||||    
T  50167579 ctccatcgtggcacgatgggctcgaaacgtggcacgatgcttcgtattcctgaacactatttaaggcttcattcttcattttttgg 50167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 834453 - 834364
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||||    
T  834453 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgggt 834364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 28265958 - 28265789
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattatt-ttaggcttatttcttcatcttttgggtgtggcat--tg 149  Q
    ||||||||| |||||||||| || |||||||||||| || |||||||||||||||| |||| | ||||||  |||||||| |||||||    || |   |    
T  28265958 ctccatcgtggcacgatgggctcaaaacgtggcacgatgctgcgtattcctgaacactattataaggcttcattcttcattttttgggaagagcttcaag 28265859  T
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgaggg 222  Q
    ||||||||||| |||||  |||| |||||||||||| |||||||| |||||||   | |||||||||||||||    
T  28265858 agagagaaactagggaaatcaaaggaggtaacttta-gggttgagggtctttg--attaggttctcttgaggg 28265789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 10925098 - 10925194
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| ||  |||| ||||||||||||||| ||||| ||||||| | |   |||||||||  ||||||||||||||||||||||||||||    
T  10925098 gagagagaaacttggaaaatcaaaggaggtaactttaggg-ttgagggtctttg-attatagttctcttg--ggttgggaaacattgtaaacaccttggg 10925193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 13138267 - 13138171
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||||||  |||| ||||||||||||||| ||||| ||||||| | |  |||||||||| ||  |||||||||||||||||||||||||    
T  13138267 gagagaaaaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attagggttctcttgggg--tgggaaacattgtaaacaccttggg 13138172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 31659113 - 31659209
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  ||||| |||||||||||||||||||||||    
T  31659113 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttcggaaacattgtaaacaccttggg 31659208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 11031302 - 11031400
Alignment:
Q  207 gaggttctcttgagggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgt-attttctcttag 304  Q
    ||||||||||||  |||||||||||||| ||||||||| |||||||||||  ||||  |||||||||||| |||||||| |||| ||  |||||||||||    
T  11031302 gaggttctcttg--ggttgggaaacatttgtaaacaccgtgggtagtgag--ttcattattggaaggatcaaaaagcttcctttagtgtttttctcttag 11031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 47255956 - 47255881
Alignment:
Q  40 tgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattt 114  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||| || ||||| || ||||||| |||||    
T  47255956 tgtagtatcacctgctccaacgtggcacgatgggctcgaaacgtggcacgatgctgcgtttttctgaacactattt 47255881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 4552922 - 4552834
Alignment:
Q  157 aacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||   ||| ||||||||||||||| ||||| ||||||  | |||||||||||||  ||||| |||||||||||||||||||||||    
T  4552922 aacttgggaaattaaaggaggtaactttaggg-ttgagggtcttta-attgaggttctcttg--ggttgagaaacattgtaaacaccttgggt 4552834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 23555558 - 23555462
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||||||  |||| |||||||||| |||| |||||  |||||| | | | |||||||||  ||||||||||||||||||||||||||||    
T  23555558 gagagaaaaacttgggaaatcaaaggaggtaacttcaggg-ttgaggatctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttggg 23555463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 28220519 - 28220423
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||| ||||| ||||||||||||    
T  28220519 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaagcattgaaaacaccttggg 28220424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 28223714 - 28223618
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||||| | ||||||||||    
T  28223714 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgaagacaccttggg 28223619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 44455035 - 44455131
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| ||  |||| ||||||||||||||| ||||| |||||||    ||| || |||||  ||||||||||||||||||||||||||||    
T  44455035 gagagagaaacttggtaaatcaaaggaggtaactttaggg-ttgagggtctttgattagagttt-tcttg--ggttgggaaacattgtaaacaccttggg 44455130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 3156741 - 3156831
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacacc 243  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  ||||| ||||||||||||||||||    
T  3156741 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggtttggaaacattgtaaacacc 3156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 197194 - 197105
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||| ||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  197194 aaacttggaaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 3847407 - 3847318
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| | ||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  3847407 aaacttgggaaatcaaaggaggtaactttaggg-tcgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 3847318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 25116539 - 25116629
Alignment:
Q  220 gggttgggaaacatt-gtaaacacctt-gggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggatt 308  Q
    ||||||||||||||| |||||||| || ||||||||||||||||  ||| |||||||  ||||  ||||||| || |||||||||| ||||    
T  25116539 gggttgggaaacatttgtaaacacattagggtagtgagatttcattatttgaaggattaaaaaaatttctttagtgttttctcttaagatt 25116629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 30476674 - 30476645
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  30476674 gggttgggaaacattgtaaacaccttgggt 30476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 249
Target Start/End: Complemental strand, 28265779 - 28265751
Alignment:
Q  221 ggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||||||||||||||||    
T  28265779 ggttgggaaacattgtaaacaccttgggt 28265751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 25 - 311
Target Start/End: Complemental strand, 10282204 - 10281919
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| || ||||||||||||  ||||||| | ||||||||||  || ||||||||||| || |||||||| ||||||| ||||| |||||| |    
T  10282204 gataaggtatagtactgtactatcaccaactccatcatggcacgatgggcacgtaacgtggcacgatgctgcgtatttctgaacactatttaaggctt-t 10282106  T
Q  124 ttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggt 223  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10282105 ttcttcatcttttgagtgtggctttgagagagaaacttgagaatacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttgagggt 10282007  T
Q  224 tgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10282006 tgtgaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcat 10281919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 104 - 311
Target Start/End: Complemental strand, 3880673 - 3880467
Alignment:
Q  104 gaacattattttaggcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgt 203  Q
    ||||| ||||| |||||| ||||||||||||||| | || || ||||||||||||| | |||||||||| |||||||||| || | ||||||||| ||||    
T  3880673 gaacactatttaaggcttctttcttcatcttttgtgggtagctttgagagagaaacctaggaatacaaaggaggtaacttgagag-ttgagtgtccttgt 3880575  T
Q  204 agtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctta 303  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||    
T  3880574 agtgaggttctcttgagggttgagaaacattgtaaacacattgggttgtgagatttcaccattggaaggatcaaaaagcttccttttgttttttctccta 3880475  T
Q  304 ggattcat 311  Q
    ||||||||    
T  3880474 ggattcat 3880467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 28832582 - 28832424
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  28832582 gagagagaaacttgg-attacaaaggaggtaactttagag-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 28832487  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  28832486 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 28832424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 11181604 - 11181762
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||||||||   |||||| |||||||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11181604 gagagagaaacttggtt-tacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 11181699  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||| |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  11181700 tagtgaaatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 11181762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 17003731 - 17003889
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||| ||||||||||| |||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  17003731 gagagagaaacttgg-attacaaaggagataactttaggg-ttgaatgtctttgtagtgaggttctcttg--ggtttggaaacattgtaaacaccttggg 17003826  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  17003827 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 17003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 24553299 - 24553457
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||| |||||||||| | |||||| |||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  24553299 gagaaagaaacttgg-attacaaaggaggtaacttaaggg-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 24553394  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||| |||||||| |||||||| ||||||| ||||||||||| ||||||    
T  24553395 tagtgagatttcaccattagaaggatcaaaaagcttccttttgtgttttctcttagaattcat 24553457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 31300367 - 31300525
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | | |||| |||||||||||| || |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  31300367 gagagagaaacttgg-attgcaaaggaggtaactttaagg-ttgagtgtctttgtagtgaggttctcttg--ggttgagaaacattgtaaacaccttggg 31300462  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||    
T  31300463 tagtgagatttcaccattggaaggatcaaaaggcttccttttgtgttttctcttaggattcat 31300525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 11916746 - 11916902
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  11916746 gagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtttctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggta 11916841  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||| ||||||    
T  11916842 gtgagatttcaccattggaaggatc-aaaaacttccttttgtgttttctcttagggttcatc 11916902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 9353104 - 9353252
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| || |||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  9353104 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttaagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 9353199  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  9353200 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 9353252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 7160679 - 7160834
Alignment:
Q  153 gagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagt 252  Q
    |||||| |||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||  |||    
T  7160679 gagaaatttgggattacaaatgaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttg--gattgggaaacattgtaatcaccttggacagt 7160775  T
Q  253 gagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||| ||||||||||||| ||||||||  |||| | ||||||||||||||||||    
T  7160776 gagatttcatcattggaaggatcaaaaagcttcattttatgttttctcttaggattcat 7160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 169 - 311
Target Start/End: Complemental strand, 19589051 - 19588912
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 268  Q
    |||| ||||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19589051 caaaggaggtaattttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacatcttgggcagtgagatttcaccattgg 19588955  T
Q  269 aaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||    
T  19588954 aaggatcaaaaatcttccttttgtgttttctcttaggattcat 19588912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 14520555 - 14520407
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||| | | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||     
T  14520555 gagagagaaacttag-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgga 14520460  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  14520459 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 14520407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 15464859 - 15464711
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | ||||||  ||| |||||||||| ||||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||    
T  15464859 gagagagaaacttgg-attacaaagaaggaaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacatcgtaaacaccttggg 15464764  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  15464763 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 15464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 311
Target Start/End: Original strand, 12083951 - 12084106
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| |||||||||||| |||||||| |||||||  |||||| ||||||| |||||||||||||||    
T  12083951 gagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttatagtgaggatctcttg--ggttggtaaacattttaaacaccttgggta 12084046  T
Q  251 gtgagatttcacca-ttggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||| ||||||| ||||||||||  |||||||| ||||||| |||| |||||||||||||    
T  12084047 gtgagaattcaccatttggaaggat--aaaagcttccttttgtgttttttcttaggattcat 12084106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 36932120 - 36932250
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | | |||| |||| |||||||||| |||||||||||| |||||| | |||||||  ||||||||||||||||||||||||||||    
T  36932120 gagagagaaacttgg-attgcaaaggagggaactttaggg-ttgagtgtctttatagtgatgatctcttg--ggttgggaaacattgtaaacaccttggg 36932215  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctt 284  Q
    ||||||||||||||||||||||||||| ||||||||    
T  36932216 tagtgagatttcaccattggaaggatc-aaaagctt 36932250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 42127146 - 42127264
Alignment:
Q  153 gagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagt 252  Q
    ||||||||||| | |||||| |||||||||||| || |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  42127146 gagaaacttgg-attacaaaggaggtaactttaagg-ttgagtatctttgtagtgaggttctcttg--ggttgagaaacattgtatacaccttgggtagt 42127241  T
Q  253 gagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||    
T  42127242 gagatttcaccattggaaggatc 42127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 38219727 - 38219603
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||    
T  38219727 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttg 38219632  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  38219631 ggtagtgagatttcaccattggaaggatc 38219603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 42127266 - 42127340
Alignment:
Q  237 aaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  42127266 aaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcat 42127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 35387991 - 35387862
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    |||||| |||||||| | |||||| |||| |||| ||||| |||||||||||||||| |||| |||||||  |||||| |||  |||||||| |||||||    
T  35387991 gagagaaaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagagagggtctcttg--ggttggaaaaaacattgtaatcaccttg 35387896  T
Q  247 ggtagtgagatttcaccattggaaggatcgaaaa 280  Q
    ||||||||||||||||||||||||||||| ||||    
T  35387895 ggtagtgagatttcaccattggaaggatctaaaa 35387862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 33030687 - 33030824
Alignment:
Q  127 ttcatcttttgggtgtggcatt-gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttg 225  Q
    ||||| ||||| ||||||| || || |||||||| | | |||||||||||||||||||||||| |||||| | ||||||  ||||||||||||  |||||    
T  33030687 ttcatgttttgtgtgtggctttagaaagagaaacctagaaatacaaaagaggtaactttaggg-ttgagtat-tttgtaacgaggttctcttg--ggttg 33030782  T
Q  226 ggaaacattgtaaacaccttgggtagtgagatttcaccattg 267  Q
     |||| ||||||| || |||||||||||||||||||||||||    
T  33030783 agaaatattgtaatcatcttgggtagtgagatttcaccattg 33030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 2630460 - 2630398
Alignment:
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||| |||||||||||| ||||||| |||||||| |||| || ||||||||||||||||||    
T  2630460 tagtgaaatttcaccattgaaaggatcaaaaagcttcctttagtgttttctcttaggattcat 2630398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 28277844 - 28277934
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattt 114  Q
    |||||||| || || |||| |||||||||||||| ||| |||||||||| ||||||||||| ||| || ||||| |||||||||| |||||    
T  28277844 gataaggtgtagtactgtaatatcacctgctccaacgttgcacgatgggctcgaaacgtggaacgatgctgcgttttcctgaacactattt 28277934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 13488078 - 13488174
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  ||||||| |||||||||||||||||||||    
T  13488078 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttggaaaacattgtaaacaccttggg 13488173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 24136142 - 24136053
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcaccattggaaggatc 275  Q
    |||||||||||||||||||  ||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||||||||||||||||    
T  24136142 gggttgagtgtctttgtagaaagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc 24136053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 28750948 - 28750852
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||||| ||||||||||||    
T  28750948 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgaaaacaccttggg 28750853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 39468842 - 39468749
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 246  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||  | |   ||||||||  |||||||||||||||||||||||||||    
T  39468842 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtcttt-cattagagttctctt--gggttgggaaacattgtaaacaccttg 39468749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 533644 - 533740
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| |||||||  |||| ||||||||||||||| ||| | |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  533644 gagagagaaatttgggaaatcaaaggaggtaactttaggg-ttgggggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 533739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 5611398 - 5611309
Alignment:
Q  223 ttgggaaacattg-taaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||| |||||||||| | || ||||||||||  |||| || |||| |||||||| |||| || ||||||||||||| ||||    
T  5611398 ttgggaaacattggtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcat 5611309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 30900108 - 30900043
Alignment:
Q  236 taaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctct 301  Q
    ||||||||||||||||||||||||||  |  ||||||||  ||||||||||||| || ||||||||    
T  30900108 taaacaccttgggtagtgagatttcattagaggaaggataaaaaagctttctttagtgttttctct 30900043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 42426527 - 42426432
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||   | |||||||||||||||||||||||||||    
T  42426527 agagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--agattgggaaacattgtaaacaccttgggt 42426432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 3075944 - 3075859
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacacctt 245  Q
    |||||| ||||  |||| ||||||||||||||| ||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||    
T  3075944 aaactttggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacacctt 3075859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 5887702 - 5887613
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| || ||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  5887702 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtatttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 5887613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 16642489 - 16642424
Alignment:
Q  49 acctgctccatcgtagcacgatgggtcgaaacgtggcacggtgttgcgtattcctgaacattattt 114  Q
    ||||||||||  || ||||||||||  ||||||||||||| || ||||| |||||| |||||||||    
T  16642489 acctgctccaatgtggcacgatgggaggaaacgtggcacgttgctgcgtgttcctggacattattt 16642424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 19806326 - 19806355
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  19806326 gggttgggaaacattgtaaacaccttgggt 19806355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 31180509 - 31180441
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  31180509 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 31180441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 8e-95; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 25 - 311
Target Start/End: Original strand, 26402873 - 26403159
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| || |||||||| |||||||||||||| |||||||||   |||||||||||||| || |||||||| ||||||| ||||| |||||| |    
T  26402873 gataaggtatagtactgtactat-acctgctccatcgtggcacgatggacacgaaacgtggcacgatgctgcgtatttctgaacactatttaaggcttct 26402971  T
Q  124 ttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggt 223  Q
    |||||||||||||| | || || ||||||||||||| | |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  26402972 ttcttcatcttttgtgagtagctttgagagagaaacctaggaatacaaaggaggtaacttttagggttgagtgtctttgtagtgaggttctcttgagggt 26403071  T
Q  224 tgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||    
T  26403072 tgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttatgattcat 26403159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 25 - 311
Target Start/End: Complemental strand, 6127676 - 6127390
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||| |   |||||||||||||| || |||||||| ||||||| ||||| || ||| |    
T  6127676 gataaggtatagtactgtactatcacctgctccatcgtggcacgattgacacgaaacgtggcacgatgctgcgtatttctgaacactatttaagacttct 6127577  T
Q  124 ttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggt 223  Q
    |||||||||||||| ||||||| ||||| ||||||  |  ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  6127576 ttcttcatcttttgtgtgtggctttgagggagaaatctatgaatacaaaagagataacttgaggg-ttgagtgtctttgtagtgaggttctcttgagggt 6127478  T
Q  224 tgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6127477 tgggaaacattgtaaacattttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcat 6127390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 23 - 249
Target Start/End: Original strand, 9765495 - 9765720
Alignment:
Q  23 cagataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggctt 121  Q
    ||||||||||||| || |||||||||||||||||||| || |||||||||| ||||||||||||||| || |||||||||||||||| ||||| ||||||    
T  9765495 cagataaggtatagtactgtactatcacctgctccattgtggcacgatggggtcgaaacgtggcacgatgctgcgtattcctgaacactatttaaggctt 9765594  T
Q  122 atttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagg 221  Q
     ||| ||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||    
T  9765595 ctttattcattttttgagtgtggctttgagagagaaacttgggaatacaaaggaggtaacttga-gggttgagtgtctttg-agtgaggttctcttgagg 9765692  T
Q  222 gttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||    
T  9765693 gttgggaaacattgtaaacaccttgggt 9765720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 149 - 310
Target Start/End: Original strand, 4696380 - 4696537
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  4696380 gagagagaaacttgg-attacaaaggagataactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 4696475  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattca 310  Q
    |||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||    
T  4696476 tagtgagatttcaccattggaaagatcaaaaagcttccttttgtgttttctcttaggattca 4696537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 5702252 - 5702411
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||| |||||||||||||||||    
T  5702252 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaatattgtaaacaccttggg 5702347  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgt-attttctcttaggattcat 311  Q
    |||||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||||||||    
T  5702348 tagtgagatttcaccattggaatgatcaaaaagcttccttttgtgtttttctcttaggattcat 5702411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 3051446 - 3051287
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||| || ||| |||  |||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||    
T  3051446 gagagagaaacttgggactataaaggagagaactttaggg-ttgagtgtctttgtagtggggttctcttgag--ttgggaaacattgtaaacatcttggg 3051350  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||| |||| |||||||| |||||||  |||||||||||||||||    
T  3051349 tagtgagatttcaccattggaaagatcaaaaagcttccttttgtgctttctcttaggattcat 3051287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 23799348 - 23799506
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| |||| |||||||  ||||||| |||||||||||||||||| |    
T  23799348 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagagaggatctcttg--ggttggggaacattgtaaacaccttgag 23799443  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||| ||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||    
T  23799444 tagggagatttcaccattggaaggatcaaaaagcttccttttgtgttttcccttaggattcat 23799506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 7412665 - 7412508
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||    
T  7412665 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagagaggatctcttg--ggttgggaaacattgtaaacaccttggg 7412570  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||| ||||||| |||||||| ||||| | | |||||||||| |||||    
T  7412569 tagtgagatttcaccattgaaaggatc-aaaagcttccttttatgtcttctcttagggttcat 7412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 169 - 311
Target Start/End: Original strand, 19752185 - 19752323
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 268  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  19752185 caaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttg--ggttgtgaaatattgtaaacaccttgggtagtgagatttcatcattgg 19752281  T
Q  269 aaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||||    
T  19752282 aaggatcaaaaagc-ttcctttgtgttttctcttaggattcat 19752323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 4456353 - 4456205
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||    
T  4456353 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctctgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 4456258  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    |||||||||||||||||| |||||||| |||||||| ||||||| | |||||||    
T  4456257 tagtgagatttcaccattagaaggatc-aaaagcttccttttgtgtcttctctt 4456205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 19175528 - 19175684
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||    
T  19175528 gagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--gattgggaaacattgtaaacaccttgggta 19175623  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    |||||||||||| |||||||||||| ||||| || ||||||| | |||||||||| ||||||    
T  19175624 gtgagatttcactattggaaggatc-aaaagtttccttttgtgtcttctcttagggttcatc 19175684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 310
Target Start/End: Complemental strand, 28307888 - 28307730
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||| ||| |||||| ||||||||||||| | ||||||||||||||||   |||||||||   |||||||||||||||| |||||||||||    
T  28307888 gagagagaaacttaggattacaaaggaggtaactttagag-ttgagtgtctttgtagcacggttctctta--ggttgggaaacattgttaacaccttggg 28307792  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattca 310  Q
    |||||||||||||| |||||||||||  |||||||||||||||| |||||| ||||||||||    
T  28307791 tagtgagatttcacaattggaaggataaaaaagctttcttttgtgttttcttttaggattca 28307730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 5990334 - 5990491
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| ||||||||   ||||||||||||| ||||||||||||  |||||||||||||||  |||||||||||||||||| || |||||     
T  5990334 gagagagaaacttggaaatacaaagacggtaactttaggg-ttgagtgtcttt--agtgaggttctcttg--ggttgggaaacattgtaatcatcttggt 5990428  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    | |||||||||||||||| ||| | || ||||||||||||| || ||||||||||||||||||    
T  5990429 ttgtgagatttcaccattcgaaaggtcaaaaagctttctttagtgttttctcttaggattcat 5990491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 284
Target Start/End: Original strand, 9054152 - 9054323
Alignment:
Q  110 tattttaggcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgag 209  Q
    ||||| ||||||  |||||||| ||||| |||||   | | ||||||||||||| ||||||||  |||||||||||||  |||||||| |||||||||||    
T  9054152 tatttaaggcttcgttcttcatgttttgtgtgtgatttagggagagaaacttggaaatacaaataaggtaactttagga-ttgagtgtttttgtagtgag 9054250  T
Q  210 gttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctt 284  Q
     ||||||||  |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  9054251 attctcttg--ggttggaaaacattataatcaccttgggtagtgagatttcaccattggaaggatcaaaaagctt 9054323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 7492993 - 7493100
Alignment:
Q  199 tttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttc 298  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||| || ||||     
T  7492993 tttgtagtgaggttctcttg--gattgggaaacattgtaaacaccttgggtagtgagatttcacaattagaaggatcaaaaagcttcctttagtgttttt 7493090  T
Q  299 tcttaggatt 308  Q
    ||||||||||    
T  7493091 tcttaggatt 7493100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 1261722 - 1261846
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| |||||||||||||||| |||| |||||||  ||||||||||  |||||||| |||||||    
T  1261722 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagagagggtctcttg--ggttgggaaaaacattgtaatcaccttg 1261817  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  1261818 ggtagtgagatttcaccattggaaggatc 1261846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 31071035 - 31071121
Alignment:
Q  189 gttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 31071121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 124 - 311
Target Start/End: Original strand, 13204538 - 13204713
Alignment:
Q  124 ttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggt 223  Q
    |||||||| ||||| ||||||| | ||||||||||||||| |||||||| |||||||||||| |  || | |||||||||| ||||||||||||| |       
T  13204538 ttcttcatgttttgtgtgtggcttagagagagaaacttggaaatacaaaggaggtaactttatgt-ttaaatgtctttgtaatgaggttctcttggg--- 13204633  T
Q  224 tgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
            |||||||||||||||||||||||||||||||| |||| || ||| ||||||||| |||  ||||||||| ||||||||||    
T  13204634 --------attgtaaacaccttgggtagtgagatttcaccgttgggagaatcaaaaagctttatttaatattttctcataggattcat 13204713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 18141569 - 18141676
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||||||||||||| || |||||||||||||||| ||||| ||||||      
T  18141569 gataaggtatagtattgtactatcatctgccccatcgtggcacgatgggctcgaaacgtggcacgatgctgcgtattcctgaacactatttaaggcttca 18141668  T
Q  124 ttcttcat 131  Q
    ||||||||    
T  18141669 ttcttcat 18141676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 26288219 - 26288095
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| | || |||| ||||| |||| ||||||||||| |||  |||||||||  ||||||||  ||||||||||||||||    
T  26288219 gagagagaaacttgg-attacaaaggggggaactctaggg-ttgaatgtctttgtagagagaatctcttgag--ttgggaaaaacattgtaaacaccttg 26288124  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  26288123 ggtagtgagatttcaccattggaaggatc 26288095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 26301476 - 26301352
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| | || |||| ||||| |||| ||||||||||| |||  |||||||||  ||||||||  ||||||||||||||||    
T  26301476 gagagagaaacttgg-attacaaaggggggaactctaggg-ttgaatgtctttgtagagagaatctcttgag--ttgggaaaaacattgtaaacaccttg 26301381  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  26301380 ggtagtgagatttcaccattggaaggatc 26301352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 26313470 - 26313346
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| | || |||| ||||| |||| ||||||||||| |||  |||||||||  ||||||||  ||||||||||||||||    
T  26313470 gagagagaaacttgg-attacaaaggggggaactctaggg-ttgaatgtctttgtagagagaatctcttgag--ttgggaaaaacattgtaaacaccttg 26313375  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  26313374 ggtagtgagatttcaccattggaaggatc 26313346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 249
Target Start/End: Original strand, 5689048 - 5689242
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttgggtgtggcat--tga 150  Q
    ||||||||| |||||||||| ||||||||||||||| ||||| ||||||||||||| ||||| ||||||  |||||||| ||||||     || |   ||    
T  5689048 ctccatcgtggcacgatgggctcgaaacgtggcacgatgttgggtattcctgaacactatttaaggcttcattcttcattttttggtaagagcttcaaga 5689147  T
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||| |||||  |||| ||| |||||||| |||||||| ||||||| | |  |||||||||||  ||| ||||||||||||||||||||||||    
T  5689148 gagagaaactagggaaatcaaaggagataacttta-gggttgagggtctttg-attagggttctcttga--gtttggaaacattgtaaacaccttgggt 5689242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 19491974 - 19491895
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||| ||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19491974 caaaggaggtaactttaggg-ttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaaacatcttgggt 19491895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 30291341 - 30291453
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||| | |||||||||||||||||||||||||| |||| ||||| |||||||  |||| | ||||||||||||||||||| ||||| ||| ||      
T  30291341 gataaggtaaagtattgtactatcacctgctccatcgtggcacaatgggctcgaaacaaggcatgatgttgcgtattcctgaacactatttaaggtttca 30291440  T
Q  124 ttcttcatctttt 136  Q
    |||||||| ||||    
T  30291441 ttcttcatttttt 30291453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 4733684 - 4733778
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||| ||||||| | |   ||||||||  ||||||||||||||||||||||||||||    
T  4733684 gagagagaaacttgggaaatcaaaagaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgtaaacaccttgg 4733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 15212661 - 15212757
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||||||||||||||||||    
T  15212661 gagagagaaacttgggaaatcaaatgaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgtaaacaccttggg 15212756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 43036298 - 43036394
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||||||||||||||||||    
T  43036298 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgtaaacaccttggg 43036393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 42498069 - 42498163
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | | | ||||||||  |||||||||||| |||||||||||||||    
T  42498069 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attaaagttctctt--gggttgggaaacgttgtaaacaccttgg 42498163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 30143217 - 30143313
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  ||||||||||||||||||||||| |||||    
T  30143217 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgtaaacacattggg 30143312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 33352025 - 33352121
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  ||||  |||||||||||||| ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  33352025 gagagagaaacttgggaaatcaaagaaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 33352120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 3303963 - 3303870
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 246  Q
    |||||| |||||||||||  |||| |||||||||||| || ||||| ||||||| | |  ||||||||||  ||||||||||||||||||||||||||    
T  3303963 gagagaaaaacttgggaaatcaaaggaggtaactttacgg-ttgagggtctttg-attagggttctcttg--ggttgggaaacattgtaaacaccttg 3303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 3318842 - 3318745
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttggg 248  Q
    ||||||||| ||| |||| |||| |||||||||||| |||||||| |||||||  | |||||||||||  ||||| ||||||| ||| ||||||||||||    
T  3318842 agagagaaagttgagaattcaaatgaggtaacttta-gggttgagggtctttggtgggaggttctctt--gggttaggaaacatttgaaaacaccttggg 3318746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 4731533 - 4731629
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||  ||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  4731533 gagagagaaacttgaaaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 4731628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 10688941 - 10689009
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  10688941 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 10689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 36979672 - 36979605
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||| ||| | || ||||||||||| ||||||||||||||||    
T  36979672 gggttgagtgtctttgtagagagtgtctctt-aggttgggaaaacattgtaatcaccttgggtagtgag 36979605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 4759875 - 4759944
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa---cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||   |||||||| ||||||||||||||||    
T  4759875 gggttgagtgtctttgtagagagagtctcttg--ggttgggaaaaaacattgtaatcaccttgggtagtgag 4759944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 4162396 - 4162468
Alignment:
Q  170 aaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 246  Q
    ||||||||||||||||||| ||||| ||||||| | |  ||||||||||  |||||| |||||||||||||||||||    
T  4162396 aaaagaggtaactttaggg-ttgagggtctttg-attagggttctcttg--ggttggaaaacattgtaaacaccttg 4162468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 4743429 - 4743400
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  4743429 gggttgggaaacattgtaaacaccttgggt 4743400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 18106304 - 18106275
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  18106304 gggttgggaaacattgtaaacaccttgggt 18106275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 41365073 - 41365044
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  41365073 gggttgggaaacattgtaaacaccttgggt 41365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 6311594 - 6311526
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  6311594 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 6311526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 18870362 - 18870430
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  18870362 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 18870430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 30655942 - 30655874
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  30655942 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 30655874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 33037609 - 33037677
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    |||||||||||||| |||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  33037609 gggttgagtgtcttcgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 33037677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 11189 - 10897
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttag 117  Q
    ||||| ||||||||||| || |||||||| |||| ||||||||| ||||||| |||||||||||||||||| || |||||||| ||||||| ||||| ||    
T  11189 gtagcggataaggtatagtactgtactat-acctactccatcgtggcacgattgggtcgaaacgtggcacgatgctgcgtatttctgaacactatttaag 11091  T
Q  118 gcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctctt 217  Q
     ||| ||||||||||||||| |||| || ||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  11090 acttctttcttcatcttttgtgtgtcgctttgagagagaaactttggaatacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaggttctctt 10992  T
Q  218 gagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctt-tcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| | ||||||||||||||||||    
T  10991 gagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttcttttttctgttttctcttaggattcat 10897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 3715629 - 3715921
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttag 117  Q
    ||||| ||||||||||| || |||||||| |||||||||||||| ||||||| |||||||||||||||||| |  |||||||| ||||||| ||||| ||    
T  3715629 gtagcggataaggtatagtactgtactat-acctgctccatcgtggcacgattgggtcgaaacgtggcacgatactgcgtatttctgaacactatttaag 3715727  T
Q  118 gcttatttcttcatcttttgggtgtg-gcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctct 216  Q
    |||| ||||||||  |||| || | | || |||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  3715728 gcttctttcttcaattttttggagagagctttgagagagaaacttgagaatacaaaggaggtaactttaggg-ttgaatgtctttgtagtgaggttctct 3715826  T
Q  217 tgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  3715827 tgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcat 3715921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 47650028 - 47649737
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttag 117  Q
    ||||| |||||||||||||| |||||||| ||||||| ||| || ||||||| |||||||||||||||||| || |||||||| ||||||| ||||| ||    
T  47650028 gtagcggataaggtataatactgtactat-acctgctgcattgtggcacgattgggtcgaaacgtggcacgatgctgcgtatttctgaacactatttaag 47649930  T
Q  118 gcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctctt 217  Q
    |||||||| ||||| ||||  ||    | |||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  47649929 gcttattttttcatttttttagtagacctttgagatagaaacttgggaatacaaaggagataactttaggg-ttgagtgtctttgtagtgaggttctctt 47649831  T
Q  218 gagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||||    
T  47649830 gagggttgggaaacattgtaaacaccttgggtagttagatttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaggattcat 47649737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 26 - 311
Target Start/End: Complemental strand, 25796230 - 25795947
Alignment:
Q  26 ataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatt 124  Q
    |||||||||| || |||||  |||||||||||| ||| | ||| ||||  || ||||||||||| || |   |||||||||||| ||||| |||||| ||    
T  25796230 ataaggtatagtactgtacattcacctgctccaacgtggtacggtgggcacgtaacgtggcacgatgcta--tattcctgaacactatttaaggcttctt 25796133  T
Q  125 tcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggtt 224  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  25796132 tcttcattttttgtgtgtggctttgagagagaaacttgggaatacaaaggaggtaacttgaggg-ttgagtgtctttgtagtgaggctctcttgagggtt 25796034  T
Q  225 gggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||||    
T  25796033 gggaaacaatgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattcat 25795947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 40592543 - 40592701
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  40592543 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 40592638  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  40592639 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 40592701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 1736065 - 1736223
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  1736065 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctattg--ggttgggaaacattgtaaacaccttggg 1736160  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||    
T  1736161 tagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcat 1736223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 21711547 - 21711390
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||| |    
T  21711547 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgag 21711452  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  21711451 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 21711390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 133 - 311
Target Start/End: Complemental strand, 21353909 - 21353729
Alignment:
Q  133 ttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggtt-gagtgtctttgtagtgaggttctcttgagggttgggaaac 231  Q
    |||||||| |||| | ||||||||||| | |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  21353909 ttttgggtatggcttagagagagaaacctaggaatacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaac 21353810  T
Q  232 attgtaaacaccttgggtagtgag-atttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    || |||||||| |||||||||||| || ||||||||||||||||| ||||| || |||| || |||||||||| |||||||    
T  21353809 atcgtaaacactttgggtagtgagaatgtcaccattggaaggatccaaaagtttcctttagtgttttctcttaagattcat 21353729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 152 - 311
Target Start/End: Complemental strand, 36029415 - 36029261
Alignment:
Q  152 agagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtag 251  Q
    |||||||||||| | |||||| ||||||| ||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  36029415 agagaaacttgg-attacaaaggaggtaaatttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtag 36029320  T
Q  252 tgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  36029319 tgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 36029261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 6794476 - 6794633
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  6794476 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtcattgtagtgaggttctcttgag--ttgggaaacattgtaaacaccttggg 6794571  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||| || | |||||||| |||||||||||||||||||| |||||    
T  6794572 tagtgagatttcaccattggaatgaac-aaaagcttccttttgtattttctcttagggttcat 6794633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 8370250 - 8370407
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||    
T  8370250 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacatcttggg 8370345  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||    
T  8370346 tagtgagatttcaccattggaaggatc-aaaagtttccttttgtgttttctcttaggattcat 8370407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 47923665 - 47923823
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||  ||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||    
T  47923665 gagagagaaacttgg-attacaaaggaggtaactttagga-ttgagtgtctttgtagtgagaatctcttg--ggttgggaaacattgtaaacaccttggg 47923760  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||    
T  47923761 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcgtaggattcat 47923823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 48438539 - 48438383
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||| ||| |||||||   ||||||||||||||||||||||||||||    
T  48438539 agagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtaaggatctcttg---gttgggaaacattgtaaacaccttgggt 48438445  T
Q  250 agtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||    
T  48438444 agtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttaggattcat 48438383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 3323469 - 3323610
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 266  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3323469 tacaaaggaggtaactttaggg-ttgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 3323565  T
Q  267 ggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||| |||| |||||||| ||||||| ||||||||||| ||||||    
T  3323566 ggaatgatcaaaaagcttccttttgtgttttctcttagaattcat 3323610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 24694927 - 24695085
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| |||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  24694927 gagagagaaatttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 24695022  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    | |||||||||||||||||||| |||| |||||||| ||||||| |||||| |||||||||||    
T  24695023 tggtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttcttttaggattcat 24695085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 1417269 - 1417410
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 266  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||| || ||||||||||||||||||||    
T  1417269 tacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttatcttg--ggttgggaaacattgtaaacactttaggtagtgagatttcaccatt 1417365  T
Q  267 ggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    | ||||||| ||||| |||||||||| ||||||||||||||||||    
T  1417366 gaaaggatcaaaaagttttcttttgtgttttctcttaggattcat 1417410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 152 - 312
Target Start/End: Complemental strand, 16264671 - 16264516
Alignment:
Q  152 agagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtag 251  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||    
T  16264671 agagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtaatgaggatctcttg--ggttgggaaacattgtaaacaccttgggtag 16264576  T
Q  252 tgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    |||||||||||||||||||||||| |||||||| ||||||| | |||||||||| ||||||    
T  16264575 tgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttagggttcatc 16264516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 27974713 - 27974861
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||    
T  27974713 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggtcgggaaacattgtaaacaccttggg 27974808  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  27974809 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 27974861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 27986217 - 27986365
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  27986217 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 27986312  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  27986313 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 27986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 151 - 311
Target Start/End: Complemental strand, 35925803 - 35925646
Alignment:
Q  151 gagagaaacttgggaatacaaaagag--gtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||| | |||||| |||  |||||||||||| |||| |||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  35925803 gagagaaacttgg-attacaaaggagatgtaactttaggg-ttgaatgtctttgtagtgaggatcttttg--ggttgggaaacattgtaaacaccttggg 35925708  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  35925707 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 35925646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 149 - 312
Target Start/End: Original strand, 39032316 - 39032473
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||| | ||||||  |||||| |||||||||||||||||||||    
T  39032316 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgagat-ctcttg--ggttggtaaacattgtaaacaccttggg 39032410  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||||| ||||||    
T  39032411 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttagggttcatc 39032473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 37466620 - 37466462
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||| | | ||||||||||||||||||||||||||   |||||||||||||||||||||| |||||    
T  37466620 gagagagaaacttgg-attacaaaggaggtaactttagagct-gagtgtctttgtagtgaggttctctta--ggttgggaaacattgtaaacactttggg 37466525  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    | |||||||||||||||||||| ||||||||||||| ||||||| |||| | |||||||||||    
T  37466524 ttgtgagatttcaccattggaaagatcgaaaagcttccttttgtgttttattttaggattcat 37466462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 149 - 308
Target Start/End: Complemental strand, 26299313 - 26299157
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | || ||| ||||||||||||||| |||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26299313 gagagagaaacttgg-attataaaggaggtaactttaggg-ttgaatgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 26299218  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttc-ttttgtattttctcttaggatt 308  Q
    ||||||||||||||||||||||  ||| |||||||| | |||||| |||||||||||||||    
T  26299217 tagtgagatttcaccattggaattatcaaaaagcttcctttttgtgttttctcttaggatt 26299157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 25929174 - 25929316
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 266  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||     
T  25929174 tacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttga--gttggaaaacattgtaaaca-cttgggtagtgagatttcaccatc 25929269  T
Q  267 ggaaggatcgaaaagct--ttcttttgtattttctcttaggattcat 311  Q
    ||||||||| |||||||  || |||||| ||||||||||||||||||    
T  25929270 ggaaggatcaaaaagcttctttttttgtgttttctcttaggattcat 25929316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 3328118 - 3328272
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | || ||| ||| ||||||||||| |||| ||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  3328118 gagagagaaacttgg-attagaaaggagataactttaggg-ttgaatgtctttgtagtgagcttctcttg--ggttggaaaacattgtaaacaccttggg 3328213  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggat 307  Q
    ||||||||||||| ||||||||||||| |||| ||| ||||||| ||||||||||||||    
T  3328214 tagtgagatttcagcattggaaggatcaaaaaacttccttttgtgttttctcttaggat 3328272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 189 - 311
Target Start/End: Complemental strand, 8126917 - 8126797
Alignment:
Q  189 gttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttctt 288  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||    
T  8126917 gttgagtgtctttgtagtgaggttttcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagcttcttt 8126820  T
Q  289 ttgtattttctcttaggattcat 311  Q
    |||| |||||||||| |||||||    
T  8126819 ttgtgttttctcttaagattcat 8126797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 33386436 - 33386584
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||  |||||||||| ||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  33386436 gagagagaaacttgg-attacaaaggagagaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgagaaacattgtaaacaccttggg 33386531  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  33386532 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 33386584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 105 - 261
Target Start/End: Original strand, 4386693 - 4386846
Alignment:
Q  105 aacattattttaggcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgta 204  Q
    |||| ||||| ||||||  ||||||||  |||| ||||| | | ||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||    
T  4386693 aacactatttaaggcttcattcttcatgatttgtgtgtgtcttagagagagaaacttgaaaatacaaaggaggtaactttaggg-ttgagtgtctttgta 4386791  T
Q  205 gtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttca 261  Q
    ||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||    
T  4386792 gtgaggttctcttg--ggttgggaaacattgtaatcaccttgagtagtgagatttca 4386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 27453283 - 27453137
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| ||||||||||  ||||||||| |||||||  |||||| |||||||||||||||||||||    
T  27453283 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtgtct--gtagtgaggatctcttg--ggttggcaaacattgtaaacaccttggg 27453190  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  27453189 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 27453137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 26928360 - 26928508
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26928360 gagagaaaaacttgg-attacaaacgagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 26928455  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    || |||||||||||||||||||||||| |||||||| || |||| | |||||||    
T  26928456 taatgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttctctt 26928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 18552716 - 18552804
Alignment:
Q  223 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||    
T  18552716 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttctcttaggattcat 18552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 32143648 - 32143500
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| |||| | |||||| |||| |||| ||||| ||||||||||||||||||| | |||||||  |||||| |||||||||||||||||||||    
T  32143648 gagagagaaatttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgatgatctcttg--ggttggaaaacattgtaaacaccttggg 32143553  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| || |||| | |||||||    
T  32143552 tagtgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttctctt 32143500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 40844963 - 40844817
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatt-----tca 261  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||||| ||| |||||||     | |    
T  40844963 tacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctattg--ggttgagaaacattgtaaacaccttgagtaatgagatttgacctga 40844867  T
Q  262 ccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  40844866 ccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 40844817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 37726000 - 37725878
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| ||||||||||||||||||||| |||||||  ||| |||||||||| ||||||||||||     
T  37726000 gagagagaaacttgg-attacaaaggaggaaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggtggggaaacattataaacaccttgga 37725905  T
Q  249 tagtgagatttcaccattggaaggatc 275  Q
    ||||||||||||||||||| |||||||    
T  37725904 tagtgagatttcaccattgaaaggatc 37725878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 249
Target Start/End: Complemental strand, 9666887 - 9666664
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||| |||||| ||||| || |||      
T  9666887 gataaggtataatattgtactatcacctgctccatcgtggcacgatgggttcaaaacgtggcacgatgttgcgtattcgtgaacactatttaagacttca 9666788  T
Q  124 ttcttcatcttttgggtgtggcat--tgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagg 221  Q
    |||||||| ||||| ||   || |   |||||||| ||| |||||  |||| |||||||||||| |||||||| ||||||| | |  ||||||||| |      
T  9666787 ttcttcat-ttttgagtagagcttcaagagagagacactagggaaatcaaatgaggtaacttta-gggttgagggtctttg-attagggttctcttca-- 9666693  T
Q  222 gttgggaaaca-ttgtaaacaccttgggt 249  Q
    ||||||||||| |||||||||||||||||    
T  9666692 gttgggaaacatttgtaaacaccttgggt 9666664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 30709617 - 30709708
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| || ||||| ||||||| ||||||||||||||||||    
T  30709617 gggttgggaaacattgtaaacaccttggggagtgagatttcatcattggaatgatcaaatagcttccttttgtgttttctcttaggattcat 30709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 1306239 - 1306153
Alignment:
Q  189 gttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  1306239 gttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 1306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 44700911 - 44700804
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    |||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| | || |||||||||||||||| ||||| ||||||      
T  44700911 gataagatataatattgtactatcacctgttccatcgtggcacgatgggctcgaaacgtggcatgatgctgcgtattcctgaacactatttaaggcttca 44700812  T
Q  124 ttcttcat 131  Q
    ||||||||    
T  44700811 ttcttcat 44700804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 23392203 - 23392106
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||| | |||| |||  || ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  23392203 gagagagaaacttgggactgcaaaggagagaaatttaggg-ttgagtgtctttgtagtgaggttctctt--gggttgggaaacattgtaaacaccttggg 23392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 27027031 - 27026925
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||| | |||||| ||||||||||||||| ||||||||||||||| ||||| |||||||  | | ||||||||||||||||||||||||    
T  27027031 gagagaaaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtactgaggatctcttg--gatagggaaacattgtaaacaccttggg 27026936  T
Q  249 tagtgagattt 259  Q
    |||||||||||    
T  27026935 tagtgagattt 27026925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 23410623 - 23410529
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 246  Q
    ||||||||||||||||| | |||| |||  |||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  23410623 gagagagaaacttgggattgcaaaggagagaactttaggg-ttgagtgtctttgtagtgaggttctctt--gggttggaaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 27038376 - 27038270
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||| | |||||| ||| ||||||||||| ||||||| ||||||||||||| |||||||  ||| ||||||||||||||||||||||||    
T  27038376 gagagaaaaacttgg-attacaaaggagataactttaggg-ttgagtgcctttgtagtgaggatctcttg--ggtagggaaacattgtaaacaccttggg 27038281  T
Q  249 tagtgagattt 259  Q
    | |||||||||    
T  27038280 tggtgagattt 27038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 5366164 - 5366243
Alignment:
Q  233 ttgtaaacaccttgggtagtgagatttcacca-ttggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||| ||||||||  | ||||||||||||||||| || |||| || ||||| ||||||||||||    
T  5366164 ttgtaaacaccttgggtagtaagatttcaataattggaaggatcgaaaagtttcctttagtgttttcgcttaggattcat 5366243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 40735258 - 40735352
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | | | ||||||||  ||||| ||||||||||||||||||||||    
T  40735258 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attaaagttctctt--gggttaggaaacattgtaaacaccttgg 40735352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 5236749 - 5236653
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  | || ||||||||||||||| ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  5236749 gagagagaaacttgggaaatcgaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 5236654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 29812938 - 29813034
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | | | ||||||||  |||||||||| |||||||||||| |||||    
T  29812938 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attaaagttctctt--gggttgggaagcattgtaaacacattggg 29813033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 39153647 - 39153558
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  39153647 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 39153558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 21156685 - 21156596
Alignment:
Q  223 ttgggaaacattg-taaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||| |||||||||| | || ||||||||||  |||| || |||| |||||||| |||| || ||||||||||||| ||||    
T  21156685 ttgggaaacattggtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcat 21156596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 2671387 - 2671455
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  2671387 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 2671455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 8477660 - 8477592
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  8477660 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 8477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 8738864 - 8738932
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  8738864 gggttgagtgtctttgtagagagtatctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 8738932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 9091102 - 9091170
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  9091102 gggttgagtgtctttgtagagagtatctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 9091170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 40372597 - 40372665
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  40372597 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 40372665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 7762141 - 7762235
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  ||||||||||| ||||| ||||||||||    
T  7762141 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaatattgtgaacaccttgg 7762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 28074177 - 28074231
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaac 107  Q
    ||||||||| |||||||||| ||||||||||||||| || ||||| |||||||||    
T  28074177 ctccatcgtggcacgatgggctcgaaacgtggcacgatgctgcgttttcctgaac 28074231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 9581225 - 9581254
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  9581225 gggttgggaaacattgtaaacaccttgggt 9581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 19684115 - 19684086
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  19684115 gggttgggaaacattgtaaacaccttgggt 19684086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 29682301 - 29682330
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  29682301 gggttgggaaacattgtaaacaccttgggt 29682330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 29810810 - 29810839
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  29810810 gggttgggaaacattgtaaacaccttgggt 29810839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 32890998 - 32891074
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||| ||||||||||||||| ||||| ||||||| | |  |||||||||| ||  ||||||||||||||||||||||||||    
T  32890998 caaaggaggtaactttaggg-ttgagggtctttg-attagggttctcttgggg--tgggaaacattgtaaacaccttgggt 32891074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 40734440 - 40734469
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  40734440 gggttgggaaacattgtaaacaccttgggt 40734469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 44331487 - 44331516
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  44331487 gggttgggaaacattgtaaacaccttgggt 44331516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 25 - 311
Target Start/End: Original strand, 3793725 - 3794010
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| ||||||||||| || ||||||||||| | ||||| |||||||||||||||||| || |||||||| ||||||| ||||| ||| || |    
T  3793725 gataaggtatagtattgtactat-acatgctccatcgtggtacgattgggtcgaaacgtggcacgatgctgcgtatttctgaacactatttaaggtttct 3793823  T
Q  124 ttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggt 223  Q
    |||||||||||||| || | || |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  3793824 ttcttcatcttttgtgtttagctttgagagagaaacttgggaatataaaggaggtaactttaggg-ttgagtgtctttatagtgaggttctcttgagggt 3793922  T
Q  224 tgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||| ||||||| ||| ||||||||||||||    
T  3793923 tggaaaacattgtaaacaccttgggtagtgagatttcaccatagaaaggatcaaaaagcttccttttgtgtttgctcttaggattcat 3794010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 108 - 311
Target Start/End: Complemental strand, 24334180 - 24333978
Alignment:
Q  108 attattttaggcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtg 207  Q
    ||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||    
T  24334180 attatttaaggcttctttcttcatcttttgtgtgtggctttgagagagaaacttgggaatacaaagaaggtaactttaggg-ttgagagtctttgtagtg 24334082  T
Q  208 aggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  24334081 aggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggat 24333982  T
Q  308 tcat 311  Q
    ||||    
T  24333981 tcat 24333978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 3777874 - 3777716
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  3777874 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 3777779  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  3777778 tagtgagatttcaccattggaatgatcaaaaagcttccttttgtattttctcttaggattcat 3777716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 5268972 - 5269130
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||     
T  5268972 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgga 5269067  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  5269068 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 5269130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 5112563 - 5112404
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||||||| || |||||| ||||||| ||||||  |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  5112563 gagagagaaacttgagattacaaaggaggtaattttaggt-ttgagtgtctttgttgtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 5112467  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||||    
T  5112466 tagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattcat 5112404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 16623065 - 16623222
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  16623065 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 16623160  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||||||||||    
T  16623161 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttcttttaggattcat 16623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 10047706 - 10047548
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||    
T  10047706 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtaatgaggatctcttg--ggttgggaaacattgtaaacaccttggg 10047611  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||| |||| |||||||||||||    
T  10047610 tagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttgtcttaggattcat 10047548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 169 - 311
Target Start/End: Original strand, 16628663 - 16628801
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 268  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16628663 caaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 16628759  T
Q  269 aaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||| |||||||| ||||||| |||||| |||||||||||    
T  16628760 aaggatc-aaaagcttccttttgtgttttcttttaggattcat 16628801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 311
Target Start/End: Original strand, 42599349 - 42599504
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||  ||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||    
T  42599349 gagagaaacttgg-attacaaaggaggtaactttagg--ttgagtgtctttgtagtgaggttctcttc--ggttgggaaacattctaaacaccttgggta 42599443  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||  |||| ||| ||||||| ||||||||||||||||||    
T  42599444 gtgagatttcaccattggaaggataaaaaaacttccttttgtgttttctcttaggattcat 42599504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 25861805 - 25861964
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | ||||||  |||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||| |    
T  25861805 gagagagaaacttgg-attacaaagaaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgag 25861900  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgt-attttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||  ||||||||||||||||||    
T  25861901 tagtgagatttcaccattggaaggatcaaaaaacttccttttgtgtttttctcttaggattcat 25861964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 39774076 - 39774235
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||  |||||| ||||||||||||||| |||||  | ||||||  ||||||||||||||  ||||||||||||||||||||||||||    
T  39774076 gagagagaaacttgggtttacaaaggaggtaactttaggg-ttgagattatttgtaacgaggttctcttgag--ttgggaaacattgtaaacaccttggg 39774172  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||| |||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||    
T  39774173 tagtgagttttcaccattggaatgatcaaaaagcttccttttgtattttctcttgggattcat 39774235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 5396443 - 5396591
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||| ||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  5396443 gagagagaaacttgg-attacaaaggaggttactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 5396538  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| | |||||||    
T  5396539 tagtgagatttcaccattggaagaatc-aaaagctttcttttgtgtcttctctt 5396591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 6743187 - 6743344
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||||||||| |||  |||||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||    
T  6743187 gagagagaaacttgg-attacaaaggaggtaacttgaggt-ttgagtgtctttgtagcgaggatctcttg--ggttgggaaacattgtaaacaccttggg 6743282  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    || |||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||    
T  6743283 taatgagatttcaccattggaaggatc-aaaaacttccttttgtgttttctcttaggattcat 6743344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 38152209 - 38152367
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| || ||| |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  || ||||||| |||||||||||||||||    
T  38152209 gagagagaaaatttggattacaaatgaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggatgggaaatattgtaaacaccttggg 38152305  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||| | |||||||||||||||||| |||||||| | ||||| ||||||||||||||||||    
T  38152306 tagtgacaattcaccattggaaggatc-aaaagcttccatttgtgttttctcttaggattcat 38152367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 6542521 - 6542378
Alignment:
Q  103 tgaacattattttaggcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttg 202  Q
    |||||| ||||| ||||||  |||||||| ||||| ||||||| ||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||    
T  6542521 tgaacactatttaaggcttcattcttcatgttttgtgtgtggctttgagagagaaacctaggaatacaaaggaggtaacttta-gggttgagtgtctttg 6542423  T
Q  203 tagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    || ||||||||||||  ||||||||||||||||||||||||||||||    
T  6542422 taatgaggttctctt--gggttgggaaacattgtaaacaccttgggt 6542378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 8689270 - 8689426
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| || |||||||||||||||||| |||||||  |||||||||||||| |||||||||||| ||    
T  8689270 gagagaaacttgg-attacaaaggaggtaactttagggttt-agtgtctttgtagtgaggatctcttg--ggttgggaaacattttaaacaccttggata 8689365  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||| ||||| || ||||||| | |||||||||| ||||||    
T  8689366 gtgagatttcaccattggaaggatc-aaaagtttccttttgtgtcttctcttagggttcatc 8689426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 36315002 - 36315159
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||| | |||||| ||||||||||||||| || ||||||||||||| |||| |||||||  |||||||||||||||||||||| |||||    
T  36315002 gagagataaacttgg-attacaaaggaggtaactttagggttt-agtgtctttgtagagaggatctcttg--ggttgggaaacattgtaaacacattggg 36315097  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| |||| || ||||||||||    
T  36315098 tagtgagatttaaccattggaaggatc-aaaagcttccttttgtgttttttcgtaggattcat 36315159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 36329211 - 36329368
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||| | |||||| ||||||||||||||| || ||||||||||||| |||| |||||||  |||||||||||||||||||||| |||||    
T  36329211 gagagataaacttgg-attacaaaggaggtaactttagggttt-agtgtctttgtagagaggatctcttg--ggttgggaaacattgtaaacacattggg 36329306  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| |||| || ||||||||||    
T  36329307 tagtgagatttaaccattggaaggatc-aaaagcttccttttgtgttttttcgtaggattcat 36329368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 152 - 302
Target Start/End: Complemental strand, 5143582 - 5143437
Alignment:
Q  152 agagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtag 251  Q
    |||||||||||| | |||| | ||||||||||||||| ||||||||||||||||||||| |||||||  | ||||||||| ||||||||||||| |||||    
T  5143582 agagaaacttgg-attacagaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--gattgggaaactttgtaaacaccttaggtag 5143487  T
Q  252 tgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    |||||||||||||||||||||||| | |||||| ||||||| |||||||||    
T  5143486 tgagatttcaccattggaaggatc-ataagcttccttttgtgttttctctt 5143437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 31985405 - 31985553
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| |||||||| |||||| ||||| |||||||  ||||||||||||||||||||||||||||    
T  31985405 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtgtttttgtattgaggatctcttg--ggttgggaaacattgtaaacaccttggg 31985500  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    |||||| |||||||||| ||||||||| |||||||| ||||||| | |||||||    
T  31985501 tagtgaaatttcaccatgggaaggatc-aaaagcttccttttgtgtcttctctt 31985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 1983071 - 1983231
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||| |||||||  ||||||  |||||||||||||| ||||||||||||||||||||||| |||||  ||||| | ||||||||||||||| |||     
T  1983071 gagagagagacttgggtttacaaagaaggtaactttaggg-ttgagtgtctttgtagtgaggttatcttg--ggttgtgtaacattgtaaacaccctggt 1983167  T
Q  249 tagtgagattt-caccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||| |||||| |||||||||||||||  |||||||| ||||||  ||||||||||||||||||    
T  1983168 tagtaagattttcaccattggaaggataaaaaagcttccttttgggttttctcttaggattcat 1983231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 54867504 - 54867347
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||  |||||||  |||||| |    ||||||||||  ||||    
T  54867504 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgagaatctcttg--ggttggaag---ttgtaaacactatggg 54867412  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttc--ttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||    
T  54867411 tagtgagatttcaccattggaaggatcaaaaagctttcttttttgtgttttctcttaggattcat 54867347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 51336892 - 51337035
Alignment:
Q  103 tgaacattattttaggcttatttcttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttg 202  Q
    |||||| ||||| || |||  |||||||| ||||| | ||||| ||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||||    
T  51336892 tgaacactatttgagacttcattcttcatgttttgcgggtggctttgagagagaaacttaggaatacaaaggaagtaacttta-gggttgaatgtctttg 51336990  T
Q  203 tagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||    
T  51336991 tagtgaggttctctt--gggttggaaaacattgtaaacaccttgggt 51337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 5148001 - 5147855
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||| | ||||||||||||||| || |||||||||||||| ||| |||||||||  |||||||||||||||||||| |||| ||    
T  5148001 gagagaaacttgg-attacacaggaggtaactttagggttt-agtgtctttgtagtaaggatctcttgag--ttgggaaacattgtaaacacattggata 5147906  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
     |||||||||||||||||||||||| | |||||| ||||||| |||||||||    
T  5147905 atgagatttcaccattggaaggatc-ataagcttccttttgtgttttctctt 5147855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 52467776 - 52467551
Alignment:
Q  23 cagataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggctt 121  Q
    ||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||| |||||||| || |||||||||||||||| ||||| ||||||    
T  52467776 cagataaggtatagtactgtactatcacctgctccatcgtggcacgatgggctcgaaatgtggcacgatgctgcgtattcctgaacactatttaaggctt 52467677  T
Q  122 atttcttcatcttttgggtgtggcat--tgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttga 219  Q
      |||||||| ||||| |||  || |   |||||||||||| ||| |  |||| ||||||| |||| |||||||| ||||||| | |  |||||||||      
T  52467676 cattcttcat-ttttgagtggagcttcaagagagagaaactagggtaatcaaaggaggtaatttta-gggttgagggtctttg-attagggttctctt-- 52467582  T
Q  220 gggttgggaaaca-ttgtaaacaccttgggt 249  Q
    ||||||||||||| |||||||||||||||||    
T  52467581 gggttgggaaacatttgtaaacaccttgggt 52467551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 18377645 - 18377526
Alignment:
Q  190 ttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttt 289  Q
    |||||||| ||||||||||||||||||||  || ||| ||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||  |||    
T  18377645 ttgagtgtatttgtagtgaggttctcttg--ggatggaaaacattgtaaaccccttgggtaatgagattttaccattggaaggatcaaaaagcttcattt 18377548  T
Q  290 tgtattttctcttaggattcat 311  Q
    ||| |||| |||||||||||||    
T  18377547 tgtgttttttcttaggattcat 18377526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 36463820 - 36463714
Alignment:
Q  26 ataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatt 124  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||| || |||||||||||||| ||||||||||||||||||||||||| ||||||  |    
T  36463820 ataaggtatagtattgtactatcacctgctccatcgtggcatgatgagttcgaaacgtggcacgatgttgcgtattcctgaacattatttaaggcttcat 36463721  T
Q  125 tcttcat 131  Q
    |||||||    
T  36463720 tcttcat 36463714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 28468306 - 28468430
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacat--tgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| || |||||||||||||||||| |||||||  |||||||||| ||  |||||||||||||    
T  28468306 gagagagaaacttgg-attacaaaggagggaactctaggg-ttaagtgtctttgtagtgaggatctcttg--ggttgggaaaaatattgtaaacaccttg 28468401  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  28468402 ggtagtgagatttcaccattggaaggatc 28468430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 48893924 - 48893839
Alignment:
Q  163 ggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||| ||||||| || |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  48893924 ggaatacaaaggaggtaatttgaggg-ttgagtgtctttgtagtgaggttctctttagggtttggaaacattgtaaacaccttgggt 48893839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 4587832 - 4587929
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtcttt-gtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| | |||||||||| ||| ||||||||||| || ||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  4587832 agagagaaacctaggaatacaaatgagataactttaggg-ttaagtgtcttttgtagtgaggttctcatg--ggttgggaaacattgtaaacaccttggg 4587928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 46147774 - 46147685
Alignment:
Q  26 ataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattt 114  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||||| || |||||||||||| || |||||||||||||||| |||||    
T  46147774 ataaggtatagtactgtactatcacctgctccaacgtggcacgatgggctcaaaacgtggcacgatgctgcgtattcctgaacactattt 46147685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 9927750 - 9927656
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||||||  |||| ||||||||||||||| ||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||    
T  9927750 gagagagaaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgg 9927656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 48142917 - 48143013
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   ||||||||  |||||||||||||||||||||||||||||    
T  48142917 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctctt--gggttgggaaacattgtaaacaccttggg 48143012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 52082950 - 52082854
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  52082950 gagagagaaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 52082855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 311
Target Start/End: Complemental strand, 37782179 - 37782030
Alignment:
Q  160 ttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacatt-gtaaacaccttgggtagtgagatt 258  Q
    |||||||  |||| ||||||||||||| | |||| | ||||||  | |||| |||||||  |||||| ||||||| ||||||||||||||||||||||||    
T  37782179 ttgggaaatcaaatgaggtaactttagag-ttgaatatctttggtgagaggctctcttg--ggttggaaaacatttgtaaacaccttgggtagtgagatt 37782083  T
Q  259 tcaccattggaaggatcgaaaagctttctttt-gtattttctcttaggattcat 311  Q
    |||  |||||||| ||| ||||| | |||||| || |||||||||| |||||||    
T  37782082 tcattattggaagaatcaaaaag-tctcttttagtgttttctcttaagattcat 37782030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 5429554 - 5429650
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| || |||||||||||| ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  5429554 gagagagaaacttgggaaatcaaaggaagtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 5429649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 26175929 - 26175833
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||||||||| | ||||| ||||||| | | | ||||| |||  ||||||||||||||||||||||||||||    
T  26175929 gagagagaaacttgggaaatcaaaggaggtaactttagag-ttgagggtctttg-attaaagttctgttg--ggttgggaaacattgtaaacaccttggg 26175834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 52095655 - 52095559
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||||||||||| ||||| | |||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  52095655 gagagagaaacttgggaaatcaaaggaggtaactttaggg-ttgagggactttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 52095560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 34670517 - 34670595
Alignment:
Q  233 ttgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||| || ||||||||||||||| |||  |  ||||||||| ||||| ||||||| || ||||||||||||||||||    
T  34670517 ttgtaagcatcttgggtagtgagatctcattagaggaaggatctaaaagttttctttagtgttttctcttaggattcat 34670595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 45687617 - 45687503
Alignment:
Q  24 agataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggctta 122  Q
    ||||||| || | ||||||||||  |||  |||||||||   |||||||| ||||||||||||||  ||||||||||| ||||||| ||||| ||||||     
T  45687617 agataagataaagtattgtactactaccaactccatcgtgctacgatgggctcgaaacgtggcacaatgttgcgtatttctgaacactatttaaggcttc 45687518  T
Q  123 tttcttcatcttttg 137  Q
     |||||||| |||||    
T  45687517 attcttcattttttg 45687503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 29254369 - 29254465
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||| ||||||||||| ||||  ||||||| |||   |||||||||  |||||||||||||||||||||| |||||    
T  29254369 gagagagaaacttgggaaatcaaaggagataactttaggg-ttgaaggtctttg-agtagagttctcttg--ggttgggaaacattgtaaacacattggg 29254464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 24742236 - 24742168
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  24742236 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 24742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 36463626 - 36463586
Alignment:
Q  207 gaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  36463626 gaggttctcttgag--ttgggaaacattgtaaacaccttgggt 36463586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 13009717 - 13009628
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| || || |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  13009717 aaacttgggaaatcaaatgaggtaactttaggg-ttaagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 13009628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 29760937 - 29760868
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa---cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||   |||||||| ||||||||||||||||    
T  29760937 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaaacattgtaatcaccttgggtagtgag 29760868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 5871762 - 5871791
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  5871762 gggttgggaaacattgtaaacaccttgggt 5871791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 45687409 - 45687380
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  45687409 gggttgggaaacattgtaaacaccttgggt 45687380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 52093957 - 52093905
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttg 202  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| |||||||    
T  52093957 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg 52093905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 873356 - 873440
Alignment:
Q  220 gggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctta 303  Q
    |||||||| |||||| |||||||||||| |||||||||| |||  |  || |||||| ||||||||  |||||| ||||||||||    
T  873356 gggttggggaacatttgtaaacaccttgagtagtgagatctcattagagggaggatcaaaaagcttcattttgtgttttctctta 873440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 6677362 - 6677438
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||   | |||||||||  ||||||||||||| |||||||||| ||||    
T  6677362 caaaggaggtaactttaggg-ttgagtgtctttgttcaggggttctctt--gggttgggaaacatttgtaaacacattgg 6677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24334511 - 24334460
Alignment:
Q  19 gtagcagataaggtataatattgtactatcacctgctccatcgtagcacgatg 71  Q
    ||||| ||||||||||| || |||||||| |||||||||||||| ||||||||    
T  24334511 gtagcggataaggtatagtaatgtactat-acctgctccatcgtggcacgatg 24334460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 48 - 311
Target Start/End: Original strand, 21801010 - 21801274
Alignment:
Q  48 cacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttgg-gtgtggc 145  Q
    |||||||||||||||| |||| |||| |||||| |||||||| || |  ||||||||||||| ||||| |||||| ||||||||| |||| | |||||||    
T  21801010 cacctgctccatcgtaccacgttggggtcgaaatgtggcacgatgctatgtattcctgaacactatttaaggcttctttcttcatttttttgagtgtggc 21801109  T
Q  146 attgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacacctt 245  Q
     |||||||||||||||| |||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21801110 tttgagagagaaacttgagaatacaaagcaggtaacttgaggg-ttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacacctt 21801208  T
Q  246 gggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||| |||||    
T  21801209 gggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttagggttcat 21801274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 102 - 308
Target Start/End: Complemental strand, 14522050 - 14521843
Alignment:
Q  102 ctgaacattattttaggcttatttcttcatcttttgg-gtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctt 200  Q
    ||||||| ||||| |||||| ||||||||| ||||   |||| || ||||||||||||| | |||||||||| ||||||||||||||| || | ||||||    
T  14522050 ctgaacactatttaaggcttctttcttcatttttttttgtgttgctttgagagagaaacctaggaatacaaatgaggtaactttagggtttaa-tgtctt 14521952  T
Q  201 tgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgag-atttcaccattggaaggatcgaaaagctttcttttgtattttct 299  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||| ||||  | ||||||    
T  14521951 tgtagttaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagaatttcaccattggaaggataaaaaatcttcctttaatgttttct 14521852  T
Q  300 cttaggatt 308  Q
    |||||||||    
T  14521851 cttaggatt 14521843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 24435744 - 24435901
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||||| || | |||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  24435744 gagagagaaactagg-attacaaaggagataactttaggg-ttgagtgtctttgt-gtgaggttctcttgag--ttgggaaacattgtaaacaccttggg 24435838  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  24435839 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 24435901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 31979837 - 31979680
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||||    
T  31979837 gagagagaaacttgg-actgcaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttcttttg--ggttgagaaacattgtaaacaccttggg 31979742  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  31979741 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 31979680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 31936900 - 31936744
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  31936900 gagagagaaacttgg-attgcaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctattg--ggttgggaaacattgtaaacaccttggg 31936805  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||||||    
T  31936804 tagtgagatttcaccattggaaggatcaaaaagctt--ctttgtgttttctcttaggattcat 31936744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 5017271 - 5017405
Alignment:
Q  152 agagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtag 251  Q
    |||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||     
T  5017271 agagaaacttgg-attacaaacgagataactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtaa 5017366  T
Q  252 tgagatttcaccattggaaggatcgaaaagctttctttt 290  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5017367 tgagatttcaccattggaaggatcgaaaagcttcctttt 5017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 5572015 - 5572172
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||  ||||||||||||||| ||| |||||||||||||| || |||||||  ||||||||||||||||||||||||||||    
T  5572015 gagagagaaacttgg-attacaatggaggtaactttaggg-ttgggtgtctttgtagtggggatctcttg--ggttgggaaacattgtaaacaccttggg 5572110  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||| ||||||| |||| |||||||| ||||||| ||||||||||||||||||    
T  5572111 tagtgagatttcactattggaatgatc-aaaagcttccttttgtgttttctcttaggattcat 5572172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 31086246 - 31086403
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| | ||||||||||||| ||||||||||||||||||||| ||||||   ||||| ||||||||||||||||||||||    
T  31086246 gagagagaaacttgg-attacaaagggggtaactttaggg-ttgagtgtctttgtagtgaggatctctta--ggttgagaaacattgtaaacaccttggg 31086341  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    | ||||||||||||||||||||||||| ||||||||  |||| | ||||||||||||||||||    
T  31086342 ttgtgagatttcaccattggaaggatc-aaaagcttctttttatgttttctcttaggattcat 31086403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 5757250 - 5757380
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||| | ||| |||||||  ||||||||||||||||||||||||||||    
T  5757250 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtatttaggatctcttg--ggttgggaaacattgtaaacaccttggg 5757345  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctt 284  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5757346 tagtgagatttcaccattggaaggatc-aaaagctt 5757380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 22964023 - 22963867
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||| | | |||||||||| ||||||||||| ||||||||||||||||||| | |||||||  | |||||||||||||||||||||||||||    
T  22964023 agagagaaactttg-attacaaaagagctaactttaggg-ttgagtgtctttgtagtgaagatctcttg--gattgggaaacattgtaaacaccttgggt 22963928  T
Q  250 agtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||| ||||  || | ||||| |||||| |||||||||||    
T  22963927 agtgagatttcaccattggaaggatc-aaaaatttccctttgtgttttcttttaggattcat 22963867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 150 - 311
Target Start/End: Original strand, 23824370 - 23824526
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||| | | |||||||||| ||||||||||| ||||||||||||||||||| | |||||||  | |||||||||||||||||||||||||||    
T  23824370 agagagaaactttg-attacaaaagagctaactttaggg-ttgagtgtctttgtagtgaagatctcttg--gattgggaaacattgtaaacaccttgggt 23824465  T
Q  250 agtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||| ||||  || | ||||| |||||| |||||||||||    
T  23824466 agtgagatttcaccattggaaggatc-aaaaatttccctttgtgttttcttttaggattcat 23824526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 31076707 - 31076866
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||| ||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||| |||  ||||  ||||| ||||| ||||||||||||| ||    
T  31076707 gagaaagaaacttgggaatacaaaggagataactataggg-ttgagtgtctttgtagtgacgttgccttg--ggttgagaaactttgtaaacaccttagg 31076803  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    || ||||||||||||||||||| |||| ||||  ||||||| || ||||||||||||||||||    
T  31076804 tattgagatttcaccattggaatgatcaaaaaaatttctttagtgttttctcttaggattcat 31076866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 4630218 - 4630121
Alignment:
Q  213 ctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  4630218 ctcttgagggttgggaaacattttaaacacattgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 4630121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 18233101 - 18233014
Alignment:
Q  223 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  18233101 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 18233014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 22709335 - 22709208
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| |||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||     
T  22709335 gagagaaaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgga 22709240  T
Q  249 tagtgagatttcaccattggaaggatcgaaaa 280  Q
    ||||||||||||||||||||||||||| ||||    
T  22709239 tagtgagatttcaccattggaaggatcaaaaa 22709208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 21356318 - 21356224
Alignment:
Q  195 tgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgt 292  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||    
T  21356318 tgtctttgtagtgaggatctcttg--ggttaggaaacattgtaaacaccttgggtagtgagatttcatcattggaagaatc-aaaagcttccttttgt 21356224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 10077027 - 10077098
Alignment:
Q  240 caccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||| |||||||||||||    
T  10077027 caccttgggtagtgagatttgaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcat 10077098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 5385881 - 5385765
Alignment:
Q  189 gttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttctt 288  Q
    |||||||||||||||||||||||||  |   |||||  ||||||||| || ||||||  ||||||||||||||||||| |||||||  ||||||||||||    
T  5385881 gttgagtgtctttgtagtgaggttcatt---gggttaagaaacattgcaatcaccttaagtagtgagatttcaccattagaaggataaaaaagctttctt 5385785  T
Q  289 ttgtattttctcttaggatt 308  Q
    | || ||| ||||| |||||    
T  5385784 tagtgtttcctcttgggatt 5385765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 5674571 - 5674660
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcaccattggaaggatc 275  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||||||||||||||||    
T  5674571 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc 5674660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 21272778 - 21272846
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaa 238  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  21272778 tacaaagggggtaactttaggg-ttgagtgtctttgtagtgaggttctctt--gggttgcgaaacattgtaa 21272846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 10076963 - 10077027
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctc 215  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  10076963 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctc 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 3039305 - 3039228
Alignment:
Q  54 ctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttca 130  Q
    ||||||||| ||||||||||  |||||||||||||| || |||||||||||||||| ||||| ||||||  |||||||    
T  3039305 ctccatcgtggcacgatgggcacgaaacgtggcacgatgctgcgtattcctgaacactatttaaggcttcattcttca 3039228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 9183324 - 9183228
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| ||||| ||  ||||||||||||||||||||||||||||    
T  9183324 gagagagaaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcctg--ggttgggaaacattgtaaacaccttggg 9183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 33721398 - 33721488
Alignment:
Q  221 ggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||| ||||||||||| | |||||||||||||  ||||||| |||  |||||||  |||| || ||||||||||||||||||    
T  33721398 ggttgggaaacatttgtaaacacctttg-tagtgagatttcattattggaatgatgaaaaagctccctttagtgttttctcttaggattcat 33721488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 18234408 - 18234341
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttg 218  Q
    |||| |||||||||| | |||||| |||||| |||||||| ||||||||||||||||||||| |||||||    
T  18234408 gagaaagaaacttgg-attacaaaggaggtagctttaggg-ttgagtgtctttgtagtgaggatctcttg 18234341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 33211478 - 33211382
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||||||||  | ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  33211478 gagagagaaacttgggaaatcaaaggaggtaactttacag-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 33211383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 28137634 - 28137605
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  28137634 gggttgggaaacattgtaaacaccttgggt 28137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 3039140 - 3039103
Alignment:
Q  207 gaggttctcttgagggttgggaaacattgtaaacaccttg 246  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  3039140 gaggttctcttg--ggttgggaaacattgtaaacaccttg 3039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 25 - 311
Target Start/End: Complemental strand, 29160256 - 29159972
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgat-gggtcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| || |||||||| |||||||||||| | ||||||| |||||||||||||||||| || ||||||   ||||||| ||||| |||||| |    
T  29160256 gataaggtatactactgtactat-acctgctccatcatggcacgattgggtcgaaacgtggcacgatgctgcgta---ctgaacactatttaaggcttct 29160161  T
Q  124 ttcttcatcttttgggt-gtg-gcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagg 221  Q
    |||||||| ||||| |  | | || |||||||||||||||||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  29160160 ttcttcattttttgagaagagagctttgagagagaaacttgggaatacaaaggaggtaacttttggg-ttgagtgtctttatagtgaggttctcttgagg 29160062  T
Q  222 gttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  29160061 gttgggaaacattgtaaacaccttgggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 29159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 30 - 311
Target Start/End: Original strand, 5816923 - 5817200
Alignment:
Q  30 ggtataatattgtactatcacctgctccatcgtagcacgatgggtcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttc 129  Q
    ||||||||| |||||||| |||| |||||| ||||||||||||   ||||||||||| | || |||||   | |||||| ||||| | ||||  ||||||    
T  5816923 ggtataatactgtactattacctactccatggtagcacgatggcaggaaacgtggcaggatgctgcgtgggc-tgaacactatttaatgcttcattcttc 5817021  T
Q  130 atcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaa 229  Q
    |  ||||  ||||||| | |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||   |||||||||    
T  5817022 aagttttatgtgtggcttagagagagaaacttgggaatacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaggttctattt--ggttgggaa 5817118  T
Q  230 acattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||    
T  5817119 acattgtaaataccttggggagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttttcttaggattcat 5817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 20284414 - 20284256
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | || ||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  20284414 gagagagaaacttgg-attataaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 20284319  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  20284318 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 20284256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 23402785 - 23402943
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  23402785 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttggg 23402880  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||    
T  23402881 tagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttaggattcat 23402943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 46516077 - 46516235
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  46516077 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttgag--ttgggaaacattgtaaacaccttggg 46516172  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| ||||||||  |||||| |||||||||| |||||||    
T  46516173 tagtgagatttcaccattggaaggatcaaaaagcttcattttgtgttttctcttaagattcat 46516235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 151 - 311
Target Start/End: Original strand, 4796443 - 4796598
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||  ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||    
T  4796443 gagagaaacttgg-attacaaaggaggtaactttagg--ttgagtgtctttgtagtgaggatctcttg--ggttggaaaacattgtaaacaccttgggta 4796537  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||    
T  4796538 gtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcat 4796598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 2580714 - 2580557
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | | |||| ||||||||||||||| |||||||||||||| ||||||||||||||  |||||| |||||||||||||||||||||    
T  2580714 gagagagaaacttgg-attgcaaaggaggtaactttaggg-ttgagtgtctttgt-gtgaggttctcttg--ggttggaaaacattgtaaacaccttggg 2580620  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||    
T  2580619 tagtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattcat 2580557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 3047580 - 3047421
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| | ||| || ||||||    
T  3047580 gagagagaaacttgggattacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggttctcttg--ggttgggaaacactataatcatcttggg 3047484  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||| |||| ||||| |||||||    
T  3047483 tagtgagatttcatcattggaaggatcaaaaagcttccttttgtgttttatcttaagattcat 3047421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 169 - 311
Target Start/End: Original strand, 9184965 - 9185104
Alignment:
Q  169 caaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 268  Q
    |||| ||||||||||||||| |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9184965 caaaggaggtaactttaggg-ttgagtatctttgtagtaaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 9185061  T
Q  269 aaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||| |||||||| ||| ||| ||||||||||||||||||    
T  9185062 aaggatcaaaaagcttccttgtgtgttttctcttaggattcat 9185104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 9189778 - 9189937
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgt-ctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||| | | |||| ||| ||||||||||| |||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  9189778 gagagagaaacttgg-attgcaaaggagataactttaggg-ttgagtgttctttgtagtaaggttctcttg--ggttgggaaacattgtaaacaccttgg 9189873  T
Q  248 gtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||    
T  9189874 gtagtgagatttcaccattggaaggatcaaaaagcttccttgtgtgttttctcttaggattcat 9189937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 2647469 - 2647627
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||| |||| |||||||||    
T  2647469 gagagagaaacttgg-actacaaaggagataactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacatggtaagcaccttggg 2647564  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||| |||  |||||| ||||||||||||||||||    
T  2647565 tagtgagatttcaccattggaaggatcaaaaaacttcattttgtgttttctcttaggattcat 2647627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 311
Target Start/End: Original strand, 33332222 - 33332380
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||| |||||||||| | |||||| ||||||||||||||| |||||||| |||||||| |||||||||||  ||||| ||||||||||||||| ||||||    
T  33332222 gagatagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtttttgtagtaaggttctcttg--ggttgagaaacattgtaaacatcttggg 33332317  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    ||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||| ||||    
T  33332318 tagtgagatttcaccattggaaggatcaaaaagcttccctttgtgttttctcttaggaatcat 33332380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 2479661 - 2479513
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| |||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||    
T  2479661 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtgtctttatagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 2479566  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||| |||||||    
T  2479565 tagtgagatttcaccattggaaggatc-aaaagcttccttttatatcttctctt 2479513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 21989231 - 21989111
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||  ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  21989231 gagagaaacttgg-attacaaaggaggtaactttaggt-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggta 21989136  T
Q  251 gtgagatttcaccattggaaggatc 275  Q
    ||||||||| |||||||||||||||    
T  21989135 gtgagattttaccattggaaggatc 21989111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 47263991 - 47263853
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | || ||| ||||||||||||||| ||||||||||||||||||||  ||||||   ||||||||||||||||||| ||||||||    
T  47263991 gagagagaaacttgg-attataaaggaggtaactttaggg-ttgagtgtctttgtagtgagaatctcttc--ggttgggaaacattgtaaataccttggg 47263896  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgt 292  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  47263895 tagtgagatttcaccattggaaggatc-aaaagcttccttttgt 47263853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 271
Target Start/End: Original strand, 44847897 - 44848015
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | || ||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||     
T  44847897 gagagagaaacttgg-attataaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgga 44847992  T
Q  249 tagtgagatttcaccattggaag 271  Q
    |||||||||||||||||||||||    
T  44847993 tagtgagatttcaccattggaag 44848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 49091921 - 49091830
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  49091921 gggttgggaaacattgaaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 49091830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 9235398 - 9235510
Alignment:
Q  195 tgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtat 294  Q
    |||||| |||||||| ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||| |    
T  9235398 tgtcttcgtagtgagattctcttg--ggttgggaaacattgtaaacaccttggatagtgatatttcaccattgcaaggatcaaaaagcttccttttgtgt 9235495  T
Q  295 tttctcttaggattc 309  Q
    |||||||||||||||    
T  9235496 tttctcttaggattc 9235510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 35961075 - 35960982
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatct 313  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||| |||||||||    
T  35961075 gggttgggaaacattgtaaacaccttaggtagtgagatttcaccattggaaggatcaaaaagcttccttttgcgttttctcttaagattcatct 35960982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 18413967 - 18413843
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  ||||||||||  || |||||||||||||    
T  18413967 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacaatgtaaacaccttg 18413872  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  18413871 ggtagtgagatttcaccattggaaggatc 18413843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 21640137 - 21640013
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| |||||||||||||||| |||| |||||||  ||||||||||  ||||||||||||||||    
T  21640137 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaaacaccttg 21640042  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  21640041 ggtagtgagatttcaccattggaaggatc 21640013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 232 - 311
Target Start/End: Complemental strand, 56195 - 56116
Alignment:
Q  232 attgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||    
T  56195 attgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcat 56116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 21646335 - 21646211
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||| | | |||||| |||| |||| ||||| |||||||||||||||| |||| |||||||  ||||||||||  ||||||||||||||||    
T  21646335 gagagagaaacttag-attacaaaggaggaaactctaggg-ttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaaacaccttg 21646240  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  21646239 ggtagtgagatttcaccattggaaggatc 21646211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 302
Target Start/End: Complemental strand, 21983545 - 21983463
Alignment:
Q  219 agggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||    
T  21983545 agggtggggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-ataagcttccttttgtgttttctctt 21983463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 18409091 - 18408967
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||| | | |||||| |||| |||| ||||| ||||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||    
T  18409091 gagagagaaacttag-attacaaaggagggaactctaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttg 18408996  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    ||||||||||||||||||||  |||||||    
T  18408995 ggtagtgagatttcaccattaaaaggatc 18408967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 22269505 - 22269595
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattt 114  Q
    |||||||| || |||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||||| |||||||||| |||||    
T  22269505 gataaggtgtagtattgtactatcacctgctccaacgtggcacgatgggttcgaaacgtggcacgatgttgcgttttcctgaacactattt 22269595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 24526316 - 24526226
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattt 114  Q
    ||||||||||| || ||||||||||||||||||||||| ||| |||||| ||||||||||||| | ||||||||||||||||||| |||||    
T  24526316 gataaggtatagtactgtactatcacctgctccatcgtggcatgatgggatcgaaacgtggcatgatgttgcgtattcctgaacactattt 24526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 43864119 - 43864215
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||||||||||||||| ||||| ||||||| | | | |||||||||  ||||||||||||||||||||||||||||    
T  43864119 gagagagaaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttggg 43864214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 49092014 - 49091918
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||||||||||| || ||||||||||||||| ||||| | |||||  ||||||||||||||| ||||||||||||    
T  49092014 gagagagaaacttgg-attacaaaggaggtaactttaagg-ttgagtgtctttgtactgaggatatcttg--ggttgggaaacattgaaaacaccttggg 49091919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 8153107 - 8153185
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcat 131  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||| ||  ||||||||    
T  8153107 ctccatcgtggcacgatgggctcgaaacgtggcacgatgttgcgtattcctgaacactatttaaggtttcattcttcat 8153185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 1533245 - 1533334
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcaccattggaaggatc 275  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||||||||||||||||    
T  1533245 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc 1533334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 31733262 - 31733166
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||||||| |||  |||||||||||||||||| | ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  31733262 gagagagaaacttgagaaatcaaaagaggtaactttagag-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 31733167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 36146792 - 36146727
Alignment:
Q  74 tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttggg 139  Q
    ||||||||||||||| || ||| |||||||||||||||||| ||||||  |||||||| |||||||    
T  36146792 tcgaaacgtggcacgatgctgcatattcctgaacattatttaaggcttcattcttcattttttggg 36146727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 47676429 - 47676333
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||||||  |||| ||| ||||||||||| ||||| |||||||    ||| ||||||||  ||||||||||||||||||||||||||||    
T  47676429 gagagagaaacttgggaaatcaaaggagataactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggg 47676334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 38671508 - 38671419
Alignment:
Q  156 aaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  38671508 aaacttgggaaatcaaaggaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 38671419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 48489309 - 48489402
Alignment:
Q  152 agagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||  |||| ||||||||||||||| ||||  |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  48489309 agagaaacttgggaaatcaaaggaggtaactttaggg-ttgatggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 48489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 41317838 - 41317753
Alignment:
Q  54 ctccatcgtagcacgatggg-tcgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttatttcttcatcttttgg 138  Q
    ||||||||| ||| |||||| ||||||||||||||| || |||| || |||||||| ||||| ||||||  |||||||| ||||||    
T  41317838 ctccatcgtggcaggatgggctcgaaacgtggcacgatgctgcggatacctgaacactatttaaggcttcattcttcattttttgg 41317753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 2058264 - 2058196
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  2058264 gggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 2058196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 18126520 - 18126615
Alignment:
Q  150 agagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 249  Q
    |||||||||||||||||  |||| |||||||||||| |||||||| ||||||| | |   |||||| |  |||||||||||||||||||||| |||||||    
T  18126520 agagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg-attagagttctcat--gggttgggaaacattgtaaacaacttgggt 18126615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 19502053 - 19502156
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| ||||||| |||  |||| ||||||||||||||| ||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||     
T  19502053 gagagacaaacttgagaaatcaaatgaggtaactttaggg-ttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggt 19502148  T
Q  249 tagtgaga 256  Q
     |||||||    
T  19502149 gagtgaga 19502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 250
Target Start/End: Complemental strand, 41649236 - 41649206
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggta 250  Q
    |||||||||||||||||||||||||||||||    
T  41649236 gggttgggaaacattgtaaacaccttgggta 41649206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 79713 - 79654
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgagg 210  Q
    ||||||||||||||| | |||||| |||||||||||| |  |||||||||||||||||||||    
T  79713 gagagagaaacttgg-attacaaaggaggtaactttaaga-ttgagtgtctttgtagtgagg 79654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 4586103 - 4586132
Alignment:
Q  220 gggttgggaaacattgtaaacaccttgggt 249  Q
    ||||||||||||||||||||||||||||||    
T  4586103 gggttgggaaacattgtaaacaccttgggt 4586132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 24526190 - 24526094
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||| ||||| |||||  |||| ||| ||||||||||| ||||| ||||||| | |  |||||||||   ||||||||||||||||||||||||||||    
T  24526190 gagagaaaaactagggaaatcaaaggagataactttaggg-ttgagggtctttg-attatggttctctta--ggttgggaaacattgtaaacaccttggg 24526095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 30025025 - 30024973
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttg 202  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| |||||||    
T  30025025 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtctttg 30024973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 4253823 - 4253730
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtga-ggttctcttgagggttgggaaaca-ttgtaaacacctt 245  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||| || ||||  |||| |||||||||  ||||||| ||||| |||||||||||||    
T  4253823 gagagagaaacttgggaaatcaaaggaggtaacttta-gggttgagggtatttg--gtgagggttctctt--gggttggaaaacatttgtaaacacctt 4253730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 20357348 - 20357416
Alignment:
Q  187 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 255  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  20357348 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 20357416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 101; Significance: 5e-50; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 149 - 312
Target Start/End: Complemental strand, 6010 - 5851
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||| |||| | |||||| |||||||||||| || ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  6010 gagagagaaaattgg-attacaaaggaggtaactttatgg-ttgagtgtctttgtagtgaggatctcttg--ggttggcaaacattgtaaacaccttggg 5915  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  5914 tagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatc 5851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 2802 - 2660
Alignment:
Q  167 tacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 266  Q
    ||||||| |||||||||||||| || ||| |||||||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  2802 tacaaaaaaggtaactttaggg-ttaagtttctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgcgtagtgagatttcaccatt 2706  T
Q  267 ggaaggatcgaaaagctttcttttgtattttctcttaggattcatc 312  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  2705 ggaaggatcaaaaagcttccttttgtgttttatcttaggattcatc 2660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 133051 - 133199
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| |||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  133051 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtttctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 133146  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  133147 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 5601 - 5794
Alignment:
Q  25 gataaggtataatattgtactatcacctgctccatcgtagcacgatgggt-cgaaacgtggcacggtgttgcgtattcctgaacattattttaggcttat 123  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||||||||  || ||||||||||| || |||||||| ||||||| ||||| |||||| |    
T  5601 gataaggtatattattgtactatcaccaactccatcgtggcacgatgggcacgtaacgtggcacgatgctgcgtatttctgaacactatttaaggctttt 5700  T
Q  124 tt-cttcatcttttgggtgtggcattgagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctctt 217  Q
    || |||||||||||| | ||||| || |||||||||| | |||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  5701 tttcttcatcttttgtgggtggctttaagagagaaacctaggaatacaaaggaggtaacttga-gggttgagtgtctttgtagtgaggttctctt 5794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 36604 - 36752
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  36604 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttggaaaacattgtaaacaccttggg 36699  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  36700 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 36752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 43733 - 43881
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  43733 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatcttttg--ggttgggaaacattgtaaacaccttggg 43828  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  43829 tagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 43881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 8189 - 8337
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||||||||| | |||||| |||| |||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  8189 gagagagaaacttgg-attacaaaggagggaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggg 8284  T
Q  249 tagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    ||||||||||||||||||||||||||  |||||||| ||||||| | |||||||    
T  8285 tagtgagatttcaccattggaaggat-taaaagcttccttttgtgtcttctctt 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 311
Target Start/End: Complemental strand, 86006 - 85850
Alignment:
Q  151 gagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 250  Q
    ||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||||||    
T  86006 gagagaaacttgg-attacaaaggaggtaactttaggg-ttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacactttgggta 85911  T
Q  251 gtgagatttcaccattggaaggatcgaaaagctttcttttgt-attttctcttaggattcat 311  Q
    ||||||||||||||||||||||||| |||| ||| |||||||  ||||||||||| ||||||    
T  85910 gtgagatttcaccattggaaggatc-aaaaacttccttttgtgtttttctcttagaattcat 85850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 302
Target Start/End: Complemental strand, 45524 - 45375
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtcttt-gtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 247  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||| ||||||| ||||||||| |||||||  ||||| |||||||||||||||||||||    
T  45524 gagagagaaacttgg-attacaaaggaggtaactttaggg-ttgaatgtcttttgtagtgaggatctcttg--ggttgtgaaacattgtaaacaccttgg 45429  T
Q  248 gtagtgagatttcaccattggaaggatcgaaaagctttcttttgtattttctctt 302  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| | |||||||    
T  45428 gtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 45375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 17720 - 17844
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| |||||||||||||||| |||| |||||||  ||||||||||  |||||||| |||||||    
T  17720 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaatcaccttg 17815  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  17816 ggtagtgagatttcaccattggaaggatc 17844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 23813 - 23937
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttg 246  Q
    ||||||||||||||| | |||||| |||| |||| ||||| |||||||||||||||| |||| |||||||  ||||||||||  |||||||| |||||||    
T  23813 gagagagaaacttgg-attacaaaggagggaactctaggg-ttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaatcaccttg 23908  T
Q  247 ggtagtgagatttcaccattggaaggatc 275  Q
    |||||||||||||||||||||||||||||    
T  23909 ggtagtgagatttcaccattggaaggatc 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 23858 - 23698
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    |||||||||||||| || |||||  |||||||||||| || ||||| |||||| |||||||||||| |||  |||||| ||| ||||||| |||||||||    
T  23858 gagagagaaacttgagattacaatggaggtaactttaagg-ttgagcgtctttatagtgaggttctattg--ggttggaaaaaattgtaatcaccttggg 23762  T
Q  249 tagtgagatttcaccattggaaggatcgaaaa-gctttcttttgtattttctcttaggattcat 311  Q
    ||||||||| |||||||| |||||||  |||| || |  |||||| ||||||||||||||||||    
T  23761 tagtgagatgtcaccattagaaggataaaaaaggcatcattttgtgttttctcttaggattcat 23698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 17576 - 17466
Alignment:
Q  149 gagagagaaacttgggaatacaaaagaggtaactttaggggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggg 248  Q
    ||||||||| ||||| | |||| | |||||||||||| || ||||||||||||||||||  | |||||||  | ||||||||||||||||||||||||||    
T  17576 gagagagaaccttgg-attacataggaggtaactttacgg-ttgagtgtctttgtagtggagatctcttg--gattgggaaacattgtaaacaccttggg 17481  T
Q  249 tagtgagatttcacc 263  Q
    |||||||||||||||    
T  17480 tagtgagatttcacc 17466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University