View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20168_high_7 (Length: 272)
Name: NF20168_high_7
Description: NF20168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20168_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 272
Target Start/End: Original strand, 8262378 - 8262638
Alignment:
| Q |
12 |
agaagaaggtggcatgttttttgctagagtaactatgatgtcctgtgagattcttaaaatttaatgtatgagagaagggagggaccaataaagagacaga |
111 |
Q |
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| T |
8262378 |
agaagaaggtggcatgttttttgctagagtaactatgatgtcctgtgagattcttaaaatttaatgtatgagagaagggagggaccaataaagagacaga |
8262477 |
T |
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| Q |
112 |
gaagcagagtcttaaatatagtgacatttaattttttcaacaacccaacaacaaataggaaatgggcacattaaattttgaagatttgaaacaataagag |
211 |
Q |
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| T |
8262478 |
gaagcagagtcttaaatatagtgacatttaattttttcaacaacccaacaacaaataggaaatgggcacattaaatttttaagatttgaaacaataagag |
8262577 |
T |
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| Q |
212 |
nnnnnnngcataatttttgaattgtattatcatagaaacagagatggtcagtgagacaaga |
272 |
Q |
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| T |
8262578 |
aaaaaaagcataatttttgaattgtattatcatagaaacagagatggtcagtgagacaaga |
8262638 |
T |
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